Carg16194 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16194
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	triosephosphate isomerase
Location	Cucurbita_argyrosperma_scaffold_068 : 625826 .. 630092 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCCACTGTATTAGCACTCGCACTCACTCACCTAATCCTGATCGTGAACCACAACCAACTAGCATCACAGAGGCACTGAACAAAAACATCTTCAGTCACTTTTAGCGGCGGAGGAGAGCCGATCGAATCCATACCTAAGCTCGGCCATGGCGGTGGTGTCTACTTCTCTCGCATCTCAGCTCTCAGCTATCAGATTGTCCACTTCCAAGTCCGACATTTCTCAGACTCTGTTTCAGAACGTCCACTCACAAATCCGCCTTGCATCCTCCCGGAAAGGTCCCCGTGGTGTTGTCACCATGGCCGGTTCCGGCAAGGTATTTCACCGTTATTTGTTAGTTTATTATTGACTTGCGCTGGAATCGTTTCCGCTATTTGAAGAACTTTTTTATTAGTGTGTCGATCATCATTCTTAACCTAGCGGCTAGCGTCTCGCGTTCGTAACTGTGTCTTAACAGTAGGGAAAGAGAATGCGTCGGATGTGGAATAAGGAGTTTCTTTGCCTATTTTTCTTGTTCGTAGCCGTTGGTCAATTTGGAATAGGCGATGACTCCTAAGTACAAATCTGTTTAAGCTATCAATTTGTCCAGCTTTTTTGTAGATCATACTTGTGAATTGTGATTAGGATTCGTTCAAGATTTAATTGTTACTCGCAACTTTTCGGTTCCATATTTCATGTCTCCCAAGCCCTCCCGCAATTTTTAGTACTGTGGATTATACTTATTGCCACAGCTTTAATGATTCTTTTTCTTCAAATTGTTATTTACCTAATCCTTGAATTAACAAGGCCATGGTTTTTACGGGTTTTATTAATTTATTAATACTAGTTTAGAAAAATCGGTATTCAATATTCTCTCATTTTCATGTTTTTCTAAGTTCTGATTATTATCACCCTTTGTTGTATTTGCAGTTCTTTGTTGGTGGAAACTGGAAATGTGTAAGTATCTTCATTATCAATAATCTTATAGCTAAAGGATGTGATGGATAGACGATAGTTATATATGTCGAGGAAAAAAGTACGAACGTTCGTTGCAAATGGATGCTATGATTTCTCTTCGAATCATTCTACGTTTCTGTTCTATCCATAATCTCACTAATGTGAAACACAAGTCGTCTTATCACGATCTTTCTAGAACTTACTTTTCTGTTGCAACTTGTGCCAAACATAGAAGAGAATGTAATTGATTTTCATTTATTTTTCTAGTACCATCGTTAATGTCTACTGTTAATTGTTACTGAAGCATGTGCAAATCATTTGAAATGGAAGAAGCCTAGAAAAAATATACCATATTCTTGTTTGTCTTTATAACTTCATTTTCATAGGCAAAAAGGGTTTAAGTTCAAACCTGGAGAGCACACAAAGGTTCCGCTGCCACTTCTATATAAGATACCACTTTTAAATTATTTTGATTGTAGTTTTAGAAGCTTAGGAGATCAGGAATCCTTTGTTGTTTACGATTTTTAAGCTCTTAGAAGTGTACTGGACACATTGTAGTACCCAAAATGAAGACACTTATCTGCCTGCTGGTATGGCTTGACTGTCGTCCAAGATGATTGAGCTACTAATATTTCCCATCCTCCTTACTTAGTAAATAAAGAAATTAATTATTTTGAACTTGTGACTGACATATATGGATTCTTACCCTGTTTAATTTAATTCCCAGAATGGTACAAAGGAATCAATAACCAAGCTTGTCTCAGATTTGAACAATGTAAAGTTGGAGGATGATGTTGGTAAGTTACGTTTGATGTTGGAGGATGCCTGTTATCACCTTTTAATGTATGTGTTCTTTCATTTAAAAAACAAAAGTTAGGTTTGAGAATACGTTTCCCCCCTCTTGTATTCACTTTGCAAATCAATGTATGAAATTCTTGCTAAAAGAAAACAAAGGTTGCATTTCATATGGGCTTGTTTCTGATTTTATTACATGAAGTGTTTTCCACCTTTTTTTTTTAATTATTATTATTAATACTTATTCTAAGATCTCTTTCAATTTTATAGTAGGTTGGTATCAAATTATTAATACACCTGAGTTATCGATGAGGATGAATGACATTTTTGTTCTAAATTCTGATAGTCTTTCTCTCCATATTGAAAGCTGGGTTTTCTCCATAATTCTTGTTCTCTTCGCACTCTTATTCTACTCTTCAAGTACATTCTTCTGAAAAAAAGAAATTTGGATATGTTGGGAGGAATGCAGATGTTGTTGTAGCACCTCCATTTCTGTACATTGATCAGGTGAGGAGCTCATTGGCACCTAGGATTGAGATTTCTGCCCAAAACTCATGGGTGAGCAAGGGTGGCGCTTTTACAGGAGAAATCAGGTTATCTGCAATGCCCTTGATGAGACATTTTAGTTTTCGAGAACCCTTAAAAATTTATTTATCTTAATTTAACTATTATTGCTGTAGAAATTTTATTCTAAACATAAAGTTCTCTAAAAAATTCATTTTGGTGCATGCAAACTCTCAATTGTACACCATTTGATAAGGGTGACAGCTCAAGTCTTCTTGTTTTATGATTTGCAAATGAGATGATGATAATGTTCAACACAAGAATACTAATGTTCAATCTGACGATACTTAGAATCTTGAACTGATTTTAGTCGTAATGTTCTGTAAACTTTTCAAATTTTAACCTAAGAGATTTTGATTTTGTAAACTGCCCTAGCTTAAACTTTTCAAATTTCATTTTTTTAAAAACTTTTTGCTTTTTTGAGGTAAGATGTCTACTAAACTTGCATTCTTTCTTTTTATTTTTGGAACTCATATTGGGGATCTTGCATGGTGTGTCATGTGTGTTTAGGGTTATTCCGGTCACAAATATATACTCAGATCTTATCATTTATAAATTAATTTGTATGTACTGCAGCGTTGAACAATTGAAAGATATAGGCTGCAAGTGGGTTATCCTTGGGCACTCTGAACGGAGACATGTCATTGGTGAAGATGACCAGGTGAATGCATTGACATTGAGCTTTGAGTGGTTTCCAAGAAATTAGTGTTCAGGCTGCTTCTCTCCAACGCTGACTGATGTTTTGGCAACTATAGTTTATAGGAAAGAAGGCTGCCTATGCCTTGAGCGAGGGTCTTGGAGTAATAGCTTGCATCGGGGAATTACTAGAGGAAAGGGAAGCTGGGAAAACTTTCGATGTTTGCTTTCAACAATTGAAAGCCTATGCAGGCAAGTTGCTGGCCCATTCCTTATTTCACTTTCACGATAATCTTATAATCACTTATCTGAGAAGAGAAAACTGCGGAACTCTCTGTAACTTTAGTAATTCCCGTTGACTGCAGATGCTGTTCCAAGTTGGGATGGTATCGTTATCGCATATGAGCCAGTATGGGCCATTGGGACTGGCAAAGTGGCTACTCCCGACCAAGCACAGGAAGTGCATGCAGCAGTTCGCGATTGGCTTAAGAAGAACGTATCACCAGAAGTGGCTTCTAAAACACGGATTATTTATGGAGGTAACTGCCACTTTCATTGTTCTACTGTCAACTTTCAGCCGCTGTAGAAATAAGTTTGCTTGCCTGAACCTTTATCAACAAGTCCATGTTTCGTAAGACTGCCACTGTGAATAACAATCAGACTGGGTCACGTGTCTAAGGAATGATATTATTATTGTTAGGATCTGTGAATGGAGGTAATTGTGCTGAGCTTGCTAAAAAAGAGGACATAGATGGATTTCTAGTGGGAGGCGCTTCGTTGAAGGTGCATTTCTTCCTCTCCCCTTATGTTTTTCTAACGTTTCTGTCAAACCATAGAAGAAAAAGTTTGGCGAACCATACTCAAAGTCCCATCTCAAATCTGTTTCATGTTGCAATTGCAGGGTCCTGAATTTGGAACAATCGTTAATTCCGTTACCGCCAAGAAAGTCGCTGCTTGAAATTTTTTCCGAGTTCCTGGTGTCAAGCACAAGAGGAAAGGTGACATGTTTTGTATTCCTAGCAACACTCCTTGGGGTTTTGTTCAGGGCCTTCTTCAATGATGGCAAGAAAATAATATCCTTCTGTTTTATTACTTTGCTATAGAATACTTGACCACATAAATGATTGGATCCAGAATTTATTCGCTTAATAAGAGTTCTAGATGCCATTCTCGATTTTTGAACTTTCATAACATCTAGATTTCTTCAATAGAAGTTACAAATTGGTATCTTGTTTGGTAATGTTCCTGTTTTTCATTTTTTATATATGTTCTGATCGTTCCATGAGTTCCAGATTTGATGGAAACTTGAGATAGCTAATAAGATGCTAGGATCTTAT

mRNA sequence

CATCCACTGTATTAGCACTCGCACTCACTCACCTAATCCTGATCGTGAACCACAACCAACTAGCATCACAGAGGCACTGAACAAAAACATCTTCAGTCACTTTTAGCGGCGGAGGAGAGCCGATCGAATCCATACCTAAGCTCGGCCATGGCGGTGGTGTCTACTTCTCTCGCATCTCAGCTCTCAGCTATCAGATTGTCCACTTCCAAGTCCGACATTTCTCAGACTCTGTTTCAGAACGTCCACTCACAAATCCGCCTTGCATCCTCCCGGAAAGGTCCCCGTGGTGTTGTCACCATGGCCGGTTCCGGCAAGAATGGTACAAAGGAATCAATAACCAAGCTTGTCTCAGATTTGAACAATGTAAAGTTGGAGGATGATGTTGATGTTGTTGTAGCACCTCCATTTCTGTACATTGATCAGGTGAGGAGCTCATTGGCACCTAGGATTGAGATTTCTGCCCAAAACTCATGGGTGAGCAAGGGTGGCGCTTTTACAGGAGAAATCAGCGTTGAACAATTGAAAGATATAGGCTGCAAGTGGGTTATCCTTGGGCACTCTGAACGGAGACATGTCATTGGTGAAGATGACCAGTTTATAGGAAAGAAGGCTGCCTATGCCTTGAGCGAGGGTCTTGGAGTAATAGCTTGCATCGGGGAATTACTAGAGGAAAGGGAAGCTGGGAAAACTTTCGATGTTTGCTTTCAACAATTGAAAGCCTATGCAGGCAAGTTGCTGGCCCATTCCTTATTTCACTTTCACGATAATCTTATAATCACTTATCTGAGAAGAGAAAACTGCGGAACTCTCTATGCTGTTCCAAGTTGGGATGGTATCGTTATCGCATATGAGCCAGTATGGGCCATTGGGACTGGCAAAGTGGCTACTCCCGACCAAGCACAGGAAGTGCATGCAGCAGTTCGCGATTGGCTTAAGAAGAACGTATCACCAGAAGTGGCTTCTAAAACACGGATTATTTATGGAGGATCTGTGAATGGAGGTAATTGTGCTGAGCTTGCTAAAAAAGAGGACATAGATGGATTTCTAGTGGGAGGCGCTTCGTTGAAGGGTCCTGAATTTGGAACAATCGTTAATTCCGTTACCGCCAAGAAAGTCGCTGCTTGAAATTTTTTCCGAGTTCCTGGTGTCAAGCACAAGAGGAAAGGTGACATGTTTTGTATTCCTAGCAACACTCCTTGGGGTTTTGTTCAGGGCCTTCTTCAATGATGGCAAGAAAATAATATCCTTCTGTTTTATTACTTTGCTATAGAATACTTGACCACATAAATGATTGGATCCAGAATTTATTCGCTTAATAAGAGTTCTAGATGCCATTCTCGATTTTTGAACTTTCATAACATCTAGATTTCTTCAATAGAAGTTACAAATTGGTATCTTGTTTGGTAATGTTCCTGTTTTTCATTTTTTATATATGTTCTGATCGTTCCATGAGTTCCAGATTTGATGGAAACTTGAGATAGCTAATAAGATGCTAGGATCTTAT

Coding sequence (CDS)

ATGGCGGTGGTGTCTACTTCTCTCGCATCTCAGCTCTCAGCTATCAGATTGTCCACTTCCAAGTCCGACATTTCTCAGACTCTGTTTCAGAACGTCCACTCACAAATCCGCCTTGCATCCTCCCGGAAAGGTCCCCGTGGTGTTGTCACCATGGCCGGTTCCGGCAAGAATGGTACAAAGGAATCAATAACCAAGCTTGTCTCAGATTTGAACAATGTAAAGTTGGAGGATGATGTTGATGTTGTTGTAGCACCTCCATTTCTGTACATTGATCAGGTGAGGAGCTCATTGGCACCTAGGATTGAGATTTCTGCCCAAAACTCATGGGTGAGCAAGGGTGGCGCTTTTACAGGAGAAATCAGCGTTGAACAATTGAAAGATATAGGCTGCAAGTGGGTTATCCTTGGGCACTCTGAACGGAGACATGTCATTGGTGAAGATGACCAGTTTATAGGAAAGAAGGCTGCCTATGCCTTGAGCGAGGGTCTTGGAGTAATAGCTTGCATCGGGGAATTACTAGAGGAAAGGGAAGCTGGGAAAACTTTCGATGTTTGCTTTCAACAATTGAAAGCCTATGCAGGCAAGTTGCTGGCCCATTCCTTATTTCACTTTCACGATAATCTTATAATCACTTATCTGAGAAGAGAAAACTGCGGAACTCTCTATGCTGTTCCAAGTTGGGATGGTATCGTTATCGCATATGAGCCAGTATGGGCCATTGGGACTGGCAAAGTGGCTACTCCCGACCAAGCACAGGAAGTGCATGCAGCAGTTCGCGATTGGCTTAAGAAGAACGTATCACCAGAAGTGGCTTCTAAAACACGGATTATTTATGGAGGATCTGTGAATGGAGGTAATTGTGCTGAGCTTGCTAAAAAAGAGGACATAGATGGATTTCTAGTGGGAGGCGCTTCGTTGAAGGGTCCTGAATTTGGAACAATCGTTAATTCCGTTACCGCCAAGAAAGTCGCTGCTTGA

Protein sequence

MAVVSTSLASQLSAIRLSTSKSDISQTLFQNVHSQIRLASSRKGPRGVVTMAGSGKNGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVRSSLAPRIEISAQNSWVSKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGELLEEREAGKTFDVCFQQLKAYAGKLLAHSLFHFHDNLIITYLRRENCGTLYAVPSWDGIVIAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNGGNCAELAKKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA

Homology

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BLAST of Carg16194 vs. NCBI nr
Match: XP_023512787.1 (triosephosphate isomerase, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 553.1 bits (1424), Expect = 6.2e-154
Identity = 295/334 (88.32%), Postives = 296/334 (88.62%), Query Frame = 0


Query: 1   MAVVSTSLASQLSAIRLSTSKSDISQTLFQNVHSQIRLASSRKGPRGVVTMAGSGK---- 60
           MAVVSTSLASQLSAIRLSTSKSDISQTLFQNVHSQIRLASSRKGPRGVVTMAGSGK    
Sbjct: 1   MAVVSTSLASQLSAIRLSTSKSDISQTLFQNVHSQIRLASSRKGPRGVVTMAGSGKFFVG 60

Query: 61  -----NGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVRSSLAPRIEISAQNSWVS 120
                NGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQV+SSLAPRIEISAQNSWVS
Sbjct: 61  GNWKCNGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVKSSLAPRIEISAQNSWVS 120

Query: 121 KGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 180
           KGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE
Sbjct: 121 KGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 180

Query: 181 LLEEREAGKTFDVCFQQLKAYAGKLLAHSLFHFHDNLIITYLRRENCGTLYAVPSWDGIV 240
           LLEEREAGKTFDVCFQQLKAYA                             AVPSWDGIV
Sbjct: 181 LLEEREAGKTFDVCFQQLKAYAD----------------------------AVPSWDGIV 240

Query: 241 IAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNGGNCAELA 300
           IAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNGGNCAELA
Sbjct: 241 IAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNGGNCAELA 300

Query: 301 KKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 326
           KKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA
Sbjct: 301 KKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 306

[Close]

BLAST of Carg16194 vs. NCBI nr
Match: XP_022987010.1 (triosephosphate isomerase, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 550.1 bits (1416), Expect = 5.2e-153
Identity = 294/334 (88.02%), Postives = 295/334 (88.32%), Query Frame = 0


Query: 1   MAVVSTSLASQLSAIRLSTSKSDISQTLFQNVHSQIRLASSRKGPRGVVTMAGSGK---- 60
           MAVVSTSLASQLSAIRLSTSKSDISQTLFQNVHSQIRLASSRKG RGVVTMAGSGK    
Sbjct: 1   MAVVSTSLASQLSAIRLSTSKSDISQTLFQNVHSQIRLASSRKGSRGVVTMAGSGKFFVG 60

Query: 61  -----NGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVRSSLAPRIEISAQNSWVS 120
                NGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQV+SSLAPRIEISAQNSWVS
Sbjct: 61  GNWKCNGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVKSSLAPRIEISAQNSWVS 120

Query: 121 KGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 180
           KGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE
Sbjct: 121 KGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 180

Query: 181 LLEEREAGKTFDVCFQQLKAYAGKLLAHSLFHFHDNLIITYLRRENCGTLYAVPSWDGIV 240
           LLEEREAGKTFDVCFQQLKAYA                             AVPSWDGIV
Sbjct: 181 LLEEREAGKTFDVCFQQLKAYAD----------------------------AVPSWDGIV 240

Query: 241 IAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNGGNCAELA 300
           IAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNGGNCAELA
Sbjct: 241 IAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNGGNCAELA 300

Query: 301 KKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 326
           KKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA
Sbjct: 301 KKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 306

[Close]

BLAST of Carg16194 vs. NCBI nr
Match: XP_022944549.1 (triosephosphate isomerase, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 549.7 bits (1415), Expect = 6.8e-153
Identity = 294/334 (88.02%), Postives = 295/334 (88.32%), Query Frame = 0


Query: 1   MAVVSTSLASQLSAIRLSTSKSDISQTLFQNVHSQIRLASSRKGPRGVVTMAGSGK---- 60
           MAVVSTSLASQLSAIRLSTSKSDISQTLFQNVHSQIRLASSRKGPRGVVTMAGSGK    
Sbjct: 1   MAVVSTSLASQLSAIRLSTSKSDISQTLFQNVHSQIRLASSRKGPRGVVTMAGSGKFFVG 60

Query: 61  -----NGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVRSSLAPRIEISAQNSWVS 120
                NGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVRSSLAPRIEISAQNSWVS
Sbjct: 61  GNWKCNGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVRSSLAPRIEISAQNSWVS 120

Query: 121 KGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 180
           KGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE
Sbjct: 121 KGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 180

Query: 181 LLEEREAGKTFDVCFQQLKAYAGKLLAHSLFHFHDNLIITYLRRENCGTLYAVPSWDGIV 240
           LLEEREAGKTFDVCFQQLKAYA                             AV SWDGIV
Sbjct: 181 LLEEREAGKTFDVCFQQLKAYAD----------------------------AVSSWDGIV 240

Query: 241 IAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNGGNCAELA 300
           IAYEPVWAIGTGKVATP+QAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNGGNCAELA
Sbjct: 241 IAYEPVWAIGTGKVATPEQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNGGNCAELA 300

Query: 301 KKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 326
           KKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA
Sbjct: 301 KKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 306

[Close]

BLAST of Carg16194 vs. NCBI nr
Match: XP_022146193.1 (triosephosphate isomerase, chloroplastic [Momordica charantia])

HSP 1 Score: 528.1 bits (1359), Expect = 2.1e-146
Identity = 278/334 (83.23%), Postives = 288/334 (86.23%), Query Frame = 0


Query: 1   MAVVSTSLASQLSAIRLSTSKSDISQTLFQNVHSQIRLASSRKGPRGVVTMAGSGK---- 60
           MAVVSTSLASQLSA+RLS+SKSDISQTLFQNVHSQIRLASSRKG RGV TMAGSGK    
Sbjct: 1   MAVVSTSLASQLSAVRLSSSKSDISQTLFQNVHSQIRLASSRKGSRGVFTMAGSGKFFVG 60

Query: 61  -----NGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVRSSLAPRIEISAQNSWVS 120
                NGTKESI KLVSDLNN KLEDDVDVVVAPPF+YIDQV+SSLA RIEISAQNSWVS
Sbjct: 61  GNWKCNGTKESIAKLVSDLNNAKLEDDVDVVVAPPFVYIDQVKSSLASRIEISAQNSWVS 120

Query: 121 KGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 180
           KGGAFTGEISVEQLKDIGCKWVILGHSERRH+IGEDDQFIGKKAAYALSEGLGVIACIGE
Sbjct: 121 KGGAFTGEISVEQLKDIGCKWVILGHSERRHIIGEDDQFIGKKAAYALSEGLGVIACIGE 180

Query: 181 LLEEREAGKTFDVCFQQLKAYAGKLLAHSLFHFHDNLIITYLRRENCGTLYAVPSWDGIV 240
           LLEEREAGKTFDVCFQQLKA+A                             A+PSWDG+V
Sbjct: 181 LLEEREAGKTFDVCFQQLKAFAD----------------------------AIPSWDGVV 240

Query: 241 IAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNGGNCAELA 300
           IAYEPVWAIGTGKVATP+QAQEVHAAVRDWLKKN+SPEVASKTRIIYGGSVNG NCAELA
Sbjct: 241 IAYEPVWAIGTGKVATPEQAQEVHAAVRDWLKKNISPEVASKTRIIYGGSVNGSNCAELA 300

Query: 301 KKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 326
           KKEDIDGFLVGGASLKGPEFGTIVNSV AKKV A
Sbjct: 301 KKEDIDGFLVGGASLKGPEFGTIVNSVAAKKVVA 306

[Close]

BLAST of Carg16194 vs. NCBI nr
Match: XP_022947479.1 (triosephosphate isomerase, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 520.4 bits (1339), Expect = 4.4e-144
Identity = 276/334 (82.63%), Postives = 288/334 (86.23%), Query Frame = 0


Query: 1   MAVVSTSLASQLSAIRLSTSKSDISQTLFQNVHSQIRLASSRKGPRGVVTMAGSGK---- 60
           MAVVSTSLASQLSA+RLS S SDISQTL QNV SQIRLASSRKG RGVVTMAGSGK    
Sbjct: 1   MAVVSTSLASQLSAVRLSGSNSDISQTLLQNVRSQIRLASSRKGSRGVVTMAGSGKFFVG 60

Query: 61  -----NGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVRSSLAPRIEISAQNSWVS 120
                NGTKESI+KLV+DLNN KLEDDVDVVVAPPF+YIDQV+SSLA RIEISAQNSWVS
Sbjct: 61  GNWKCNGTKESISKLVADLNNAKLEDDVDVVVAPPFVYIDQVKSSLASRIEISAQNSWVS 120

Query: 121 KGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 180
           KGGAFTGEISVEQLKD+GCKWVILGHSERRH+IGEDDQFIGKKAAYALSEGLGV+ACIGE
Sbjct: 121 KGGAFTGEISVEQLKDLGCKWVILGHSERRHIIGEDDQFIGKKAAYALSEGLGVMACIGE 180

Query: 181 LLEEREAGKTFDVCFQQLKAYAGKLLAHSLFHFHDNLIITYLRRENCGTLYAVPSWDGIV 240
           LLEEREAGKTFDVCF+QLKA+A                             AVPSWDGIV
Sbjct: 181 LLEEREAGKTFDVCFRQLKAFAD----------------------------AVPSWDGIV 240

Query: 241 IAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNGGNCAELA 300
           IAYEPVWAIGTGKVA+P+QAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNG NCAELA
Sbjct: 241 IAYEPVWAIGTGKVASPEQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNGSNCAELA 300

Query: 301 KKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 326
           KKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA
Sbjct: 301 KKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 306

[Close]

BLAST of Carg16194 vs. TAIR10
Match: AT2G21170.1 (triosephosphate isomerase)

HSP 1 Score: 430.3 bits (1105), Expect = 1.1e-120
Identity = 234/343 (68.22%), Postives = 256/343 (74.64%), Query Frame = 0


Query: 1   MAVVSTSLASQLSAIRLSTSKSDIS-----QTLFQNVHSQIRL----ASSRKGPRGVVTM 60
           MA  S +     S +R  + K D +     Q+ F  V+S  RL    +SS + PRGVV M
Sbjct: 1   MAATSLTAPPSFSGLRRISPKLDAAAVSSHQSFFHRVNSSTRLVSSSSSSHRSPRGVVAM 60

Query: 61  AGSGK---------NGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVRSSLAPRIE 120
           AGSGK         NGTK+SI KL+SDLN+  LE DVDVVV+PPF+YIDQV+SSL  RI+
Sbjct: 61  AGSGKFFVGGNWKCNGTKDSIAKLISDLNSATLEADVDVVVSPPFVYIDQVKSSLTDRID 120

Query: 121 ISAQNSWVSKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEG 180
           IS QNSWV KGGAFTGEISVEQLKD+GCKWVILGHSERRHVIGE D+FIGKKAAYALSEG
Sbjct: 121 ISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEG 180

Query: 181 LGVIACIGELLEEREAGKTFDVCFQQLKAYAGKLLAHSLFHFHDNLIITYLRRENCGTLY 240
           LGVIACIGE LEEREAGKTFDVCF QLKA+A                             
Sbjct: 181 LGVIACIGEKLEEREAGKTFDVCFAQLKAFAD---------------------------- 240

Query: 241 AVPSWDGIVIAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSV 300
           AVPSWD IV+AYEPVWAIGTGKVA+P QAQEVH AVR WLKKNVS EVASKTRIIYGGSV
Sbjct: 241 AVPSWDNIVVAYEPVWAIGTGKVASPQQAQEVHVAVRGWLKKNVSEEVASKTRIIYGGSV 300

Query: 301 NGGNCAELAKKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 326
           NGGN AELAK+EDIDGFLVGGASLKGPEF TIVNSVT+KKVAA
Sbjct: 301 NGGNSAELAKEEDIDGFLVGGASLKGPEFATIVNSVTSKKVAA 315

[Close]

BLAST of Carg16194 vs. TAIR10
Match: AT3G55440.1 (triosephosphate isomerase)

HSP 1 Score: 275.8 bits (704), Expect = 3.4e-74
Identity = 143/270 (52.96%), Postives = 180/270 (66.67%), Query Frame = 0


Query: 57  NGTKESITKLVSDLNNVKL--EDDVDVVVAPPFLYIDQVRSSLAPRIEISAQNSWVSKGG 116
           NGT E + K+V+ LN  ++  +D V+VVV+PP++++  V+S+L     ++AQN WV KGG
Sbjct: 14  NGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSTLRSDFFVAAQNCWVKKGG 73

Query: 117 AFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGELLE 176
           AFTGE+S E L ++   WVILGHSERR ++ E  +F+G K AYAL++GL VIAC+GE LE
Sbjct: 74  AFTGEVSAEMLVNLDIPWVILGHSERRAILNESSEFVGDKVAYALAQGLKVIACVGETLE 133

Query: 177 EREAGKTFDVCFQQLKAYAGKLLAHSLFHFHDNLIITYLRRENCGTLYAVPSWDGIVIAY 236
           EREAG T DV   Q KA A +                            V +W  +VIAY
Sbjct: 134 EREAGSTMDVVAAQTKAIADR----------------------------VTNWSNVVIAY 193

Query: 237 EPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNGGNCAELAKKE 296
           EPVWAIGTGKVA+P QAQEVH  +R WL KNVS +VA+ TRIIYGGSVNGGNC EL  + 
Sbjct: 194 EPVWAIGTGKVASPAQAQEVHDELRKWLAKNVSADVAATTRIIYGGSVNGGNCKELGGQA 253

Query: 297 DIDGFLVGGASLKGPEFGTIVNSVTAKKVA 325
           D+DGFLVGGASLK PEF  I+ +   KK A
Sbjct: 254 DVDGFLVGGASLK-PEFIDIIKAAEVKKSA 254

[Close]

BLAST of Carg16194 vs. Swiss-Prot
Match: sp|P48496|TPIC_SPIOL (Triosephosphate isomerase, chloroplastic OS=Spinacia oleracea OX=3562 GN=TPIP1 PE=1 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 1.1e-125
Identity = 246/350 (70.29%), Postives = 272/350 (77.71%), Query Frame = 0


Query: 1   MAVVSTSLASQL-----------SAIRLSTSKSDIS----QTLFQNVHSQIRL-ASSRKG 60
           MAVVSTSLASQ+           S +R S  K + S     + FQNV S +RL +SSR+ 
Sbjct: 1   MAVVSTSLASQITNPNSAVSTQFSGLRRSFLKLENSVSTQSSFFQNVDSHLRLSSSSRRC 60

Query: 61  PRGVVTMAGSGK---------NGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVRS 120
           PRGVV MAGSGK         NGTKESITKLVSDLN+  LE DVDVVVAPPF+YIDQV+S
Sbjct: 61  PRGVVAMAGSGKFFVGGNWKCNGTKESITKLVSDLNSATLEADVDVVVAPPFVYIDQVKS 120

Query: 121 SLAPRIEISAQNSWVSKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKA 180
           SL  R+EISAQN W+ KGGAFTGEISVEQLKD+GC+WVILGHSERRHVIGE ++FIGKKA
Sbjct: 121 SLTGRVEISAQNCWIGKGGAFTGEISVEQLKDLGCQWVILGHSERRHVIGEQNEFIGKKA 180

Query: 181 AYALSEGLGVIACIGELLEEREAGKTFDVCFQQLKAYAGKLLAHSLFHFHDNLIITYLRR 240
           AYAL++G+GVIACIGELLEEREAGKTFDVC+QQLKA+A                      
Sbjct: 181 AYALNQGVGVIACIGELLEEREAGKTFDVCYQQLKAFAD--------------------- 240

Query: 241 ENCGTLYAVPSWDGIVIAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTR 300
                  A+PSWD +V+AYEPVWAIGTGKVA+PDQAQEVH AVRDWLKKNVS EVASKTR
Sbjct: 241 -------ALPSWDNVVVAYEPVWAIGTGKVASPDQAQEVHVAVRDWLKKNVSEEVASKTR 300

Query: 301 IIYGGSVNGGNCAELAKKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 326
           IIYGGSVNGGNCAELAK+EDIDGFLVGGASLKGPEF TIVNSVTAKKVAA
Sbjct: 301 IIYGGSVNGGNCAELAKQEDIDGFLVGGASLKGPEFATIVNSVTAKKVAA 322

[Close]

BLAST of Carg16194 vs. Swiss-Prot
Match: sp|Q9M4S8|TPIC_FRAAN (Triosephosphate isomerase, chloroplastic OS=Fragaria ananassa OX=3747 GN=TPI PE=2 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 4.0e-120
Identity = 241/345 (69.86%), Postives = 264/345 (76.52%), Query Frame = 0


Query: 1   MAVVSTSLASQL----------SAIRLSTSKSDIS-QTLFQNVHSQIRLASSRKGPRGVV 60
           MAV STSLASQL          S +R S  K D S  +LFQ++      +SSRK  R VV
Sbjct: 1   MAVASTSLASQLSGPKSLSQPYSGLRRSCPKLDQSHSSLFQHLSLS---SSSRKASRAVV 60

Query: 61  TMAGSGK---------NGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVRSSLAPR 120
            MAG+GK         NGTK+ I+KLVSDLN+ KLE DVDVVVAPPFLY+DQV+SSL  R
Sbjct: 61  AMAGTGKFFVGGNWKCNGTKDLISKLVSDLNSAKLEPDVDVVVAPPFLYLDQVKSSLTDR 120

Query: 121 IEISAQNSWVSKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALS 180
           IEIS QNSWV+KGGAFTGEISVEQLKDIG KWVILGHSERRHVIGEDDQFIGKKAAYAL+
Sbjct: 121 IEISGQNSWVAKGGAFTGEISVEQLKDIGRKWVILGHSERRHVIGEDDQFIGKKAAYALN 180

Query: 181 EGLGVIACIGELLEEREAGKTFDVCFQQLKAYAGKLLAHSLFHFHDNLIITYLRRENCGT 240
           EGLGVIACIGE LEEREAGKTFDVC++QLKA+A                           
Sbjct: 181 EGLGVIACIGEKLEEREAGKTFDVCYEQLKAFAD-------------------------- 240

Query: 241 LYAVPSWDGIVIAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGG 300
             AVPSW+ IV+AYEPVWAIGTGKVA+P QAQEVH AVR+WLKKNVS EVASKTRIIYGG
Sbjct: 241 --AVPSWENIVVAYEPVWAIGTGKVASPQQAQEVHVAVREWLKKNVSAEVASKTRIIYGG 300

Query: 301 SVNGGNCAELAKKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 326
           SVNGGN AELAK+EDIDGFLVGGASLKGPEF TIVN+VT+KKVAA
Sbjct: 301 SVNGGNSAELAKEEDIDGFLVGGASLKGPEFATIVNAVTSKKVAA 314

[Close]

BLAST of Carg16194 vs. Swiss-Prot
Match: sp|Q9SKP6|TPIC_ARATH (Triosephosphate isomerase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIM PE=1 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 2.0e-119
Identity = 234/343 (68.22%), Postives = 256/343 (74.64%), Query Frame = 0


Query: 1   MAVVSTSLASQLSAIRLSTSKSDIS-----QTLFQNVHSQIRL----ASSRKGPRGVVTM 60
           MA  S +     S +R  + K D +     Q+ F  V+S  RL    +SS + PRGVV M
Sbjct: 1   MAATSLTAPPSFSGLRRISPKLDAAAVSSHQSFFHRVNSSTRLVSSSSSSHRSPRGVVAM 60

Query: 61  AGSGK---------NGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVRSSLAPRIE 120
           AGSGK         NGTK+SI KL+SDLN+  LE DVDVVV+PPF+YIDQV+SSL  RI+
Sbjct: 61  AGSGKFFVGGNWKCNGTKDSIAKLISDLNSATLEADVDVVVSPPFVYIDQVKSSLTDRID 120

Query: 121 ISAQNSWVSKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEG 180
           IS QNSWV KGGAFTGEISVEQLKD+GCKWVILGHSERRHVIGE D+FIGKKAAYALSEG
Sbjct: 121 ISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEG 180

Query: 181 LGVIACIGELLEEREAGKTFDVCFQQLKAYAGKLLAHSLFHFHDNLIITYLRRENCGTLY 240
           LGVIACIGE LEEREAGKTFDVCF QLKA+A                             
Sbjct: 181 LGVIACIGEKLEEREAGKTFDVCFAQLKAFAD---------------------------- 240

Query: 241 AVPSWDGIVIAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSV 300
           AVPSWD IV+AYEPVWAIGTGKVA+P QAQEVH AVR WLKKNVS EVASKTRIIYGGSV
Sbjct: 241 AVPSWDNIVVAYEPVWAIGTGKVASPQQAQEVHVAVRGWLKKNVSEEVASKTRIIYGGSV 300

Query: 301 NGGNCAELAKKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 326
           NGGN AELAK+EDIDGFLVGGASLKGPEF TIVNSVT+KKVAA
Sbjct: 301 NGGNSAELAKEEDIDGFLVGGASLKGPEFATIVNSVTSKKVAA 315

[Close]

BLAST of Carg16194 vs. Swiss-Prot
Match: sp|P46225|TPIC_SECCE (Triosephosphate isomerase, chloroplastic OS=Secale cereale OX=4550 PE=1 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 4.5e-108
Identity = 203/284 (71.48%), Postives = 223/284 (78.52%), Query Frame = 0


Query: 51  MAGSGK---------NGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVRSSLAPRI 110
           MAGSGK         NGTKESI+KLVSDLN   LE DVDVVVAPPF+YIDQV+SSL  RI
Sbjct: 43  MAGSGKFFVGGNWKCNGTKESISKLVSDLNAATLESDVDVVVAPPFIYIDQVKSSLTDRI 102

Query: 111 EISAQNSWVSKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSE 170
           E+SAQN+W+ KGGAFTGEIS EQL DIGC+WVILGHSERRHVIGEDD+FIGKKAAYALS+
Sbjct: 103 EVSAQNTWIGKGGAFTGEISAEQLVDIGCQWVILGHSERRHVIGEDDEFIGKKAAYALSQ 162

Query: 171 GLGVIACIGELLEEREAGKTFDVCFQQLKAYAGKLLAHSLFHFHDNLIITYLRRENCGTL 230
            L V+ACIGELLEEREAGKTFDVCF+Q+KA+A            DN              
Sbjct: 163 NLKVMACIGELLEEREAGKTFDVCFKQMKAFA------------DN-------------- 222

Query: 231 YAVPSWDGIVIAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGS 290
             +  W  +VIAYEPVWAIGTGKVA+P+QAQEVHAAVRDWLK NVS +VAS  RIIYGGS
Sbjct: 223 --ITDWTNVVIAYEPVWAIGTGKVASPEQAQEVHAAVRDWLKTNVSADVASTVRIIYGGS 282

Query: 291 VNGGNCAELAKKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 326
           VN  NCAELAKKEDIDGFLVGGASLKGP+F TI NSVT+KKV A
Sbjct: 283 VNAANCAELAKKEDIDGFLVGGASLKGPDFATICNSVTSKKVTA 298

[Close]

BLAST of Carg16194 vs. Swiss-Prot
Match: sp|P48497|TPIS_STELP (Triosephosphate isomerase, cytosolic OS=Stellaria longipes OX=19744 GN=TPI PE=2 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 3.0e-91
Identity = 168/271 (61.99%), Postives = 202/271 (74.54%), Query Frame = 0


Query: 57  NGTKESITKLVSDLN--NVKLEDDVDVVVAPPFLYIDQVRSSLAPRIEISAQNSWVSKGG 116
           NGT+ES++K+V  LN   +   D V VVV+PP++++    + L   I+++AQN WV KGG
Sbjct: 14  NGTQESVSKIVDTLNEPTIAANDVVTVVVSPPYVFLPDENAELKHEIQVAAQNCWVKKGG 73

Query: 117 AFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGELLE 176
           AFTGE+S + L ++G  WVILGHSERR ++GE ++F+GKKAAYA SEGLGVIACIGELLE
Sbjct: 74  AFTGEVSAQMLANLGITWVILGHSERRTLLGESNEFVGKKAAYAQSEGLGVIACIGELLE 133

Query: 177 EREAGKTFDVCFQQLKAYAGKLLAHSLFHFHDNLIITYLRRENCGTLYAVPSWDGIVIAY 236
           EREAGKTFDVCF+QLK++A                            +    WD +V+AY
Sbjct: 134 EREAGKTFDVCFKQLKSFA---------------------------RFPAKPWDNVVVAY 193

Query: 237 EPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNGGNCAELAKKE 296
           EPVWAIGTGKVA+P+QAQEVH AVRDWLK NVS EVASKTRIIYGGSVNGGN   LA +E
Sbjct: 194 EPVWAIGTGKVASPEQAQEVHVAVRDWLKTNVSEEVASKTRIIYGGSVNGGNSLALAAQE 253

Query: 297 DIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 326
           D+DGFLVGGASLKGPEF TI+NSVTAKKVAA
Sbjct: 254 DVDGFLVGGASLKGPEFATIINSVTAKKVAA 257

[Close]

BLAST of Carg16194 vs. TrEMBL
Match: tr|A0A0A0LJ13|A0A0A0LJ13_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G263900 PE=3 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 6.7e-141
Identity = 270/333 (81.08%), Postives = 280/333 (84.08%), Query Frame = 0


Query: 1   MAVVSTSLASQLSAIRLSTSKSDISQTLFQNVHSQIRLASSRKGPRGVVTMAGSGK---- 60
           MA VSTSLAS+ S +R S+S SDIS +LF NVHSQIRLASSRKG RGVVTMAGSGK    
Sbjct: 1   MAAVSTSLASRFSPLRFSSSNSDISHSLFHNVHSQIRLASSRKGSRGVVTMAGSGKFFVG 60

Query: 61  -----NGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVRSSLAPRIEISAQNSWVS 120
                NGTKESI KLV+DLNN KLEDDVDVVVAPPF+YI+QV+SSL  RIEISAQNSWVS
Sbjct: 61  GNWKCNGTKESIAKLVADLNNAKLEDDVDVVVAPPFVYIEQVKSSLTSRIEISAQNSWVS 120

Query: 121 KGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 180
           KGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE
Sbjct: 121 KGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 180

Query: 181 LLEEREAGKTFDVCFQQLKAYAGKLLAHSLFHFHDNLIITYLRRENCGTLYAVPSWDGIV 240
           LLEEREAGKTFDVCFQQLKAYA                             AVPSWD IV
Sbjct: 181 LLEEREAGKTFDVCFQQLKAYAD----------------------------AVPSWDSIV 240

Query: 241 IAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNGGNCAELA 300
           IAYEPVWAIGTGKVATP+QAQEVHAA+RDWLKKNVS EVASKTRIIYGGSVNG NCAELA
Sbjct: 241 IAYEPVWAIGTGKVATPEQAQEVHAAIRDWLKKNVSSEVASKTRIIYGGSVNGSNCAELA 300

Query: 301 KKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVA 325
           KKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVA
Sbjct: 301 KKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVA 305

[Close]

BLAST of Carg16194 vs. TrEMBL
Match: tr|A0A1S3C5Y3|A0A1S3C5Y3_CUCME (triosephosphate isomerase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497295 PE=3 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 2.0e-140
Identity = 271/334 (81.14%), Postives = 279/334 (83.53%), Query Frame = 0


Query: 1   MAVVSTSLASQLSAIRLSTSKSDISQTLFQNVHSQIRLASSRKGPRGVVTMAGSGK---- 60
           MA VSTSLASQLS +R S+S SD S +LF NVHSQIRLASSRK  RGVV MAGSGK    
Sbjct: 1   MAAVSTSLASQLSPLRFSSSNSDTSHSLFHNVHSQIRLASSRKVSRGVVAMAGSGKFFVG 60

Query: 61  -----NGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVRSSLAPRIEISAQNSWVS 120
                NGTKESI KLVSDLNN KLEDDVDVVVAPPF+YI+QV+SSL  RIEISAQNSWVS
Sbjct: 61  GNWKCNGTKESIAKLVSDLNNAKLEDDVDVVVAPPFVYIEQVKSSLTSRIEISAQNSWVS 120

Query: 121 KGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 180
           KGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE
Sbjct: 121 KGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 180

Query: 181 LLEEREAGKTFDVCFQQLKAYAGKLLAHSLFHFHDNLIITYLRRENCGTLYAVPSWDGIV 240
           LLEEREAGKTFDVCFQQLKAYA                             AVPSWD IV
Sbjct: 181 LLEEREAGKTFDVCFQQLKAYAD----------------------------AVPSWDSIV 240

Query: 241 IAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNGGNCAELA 300
           IAYEPVWAIGTGKVATP+QAQEVHAA+RDWLKKNVS EVASKTRIIYGGSVNG NCAELA
Sbjct: 241 IAYEPVWAIGTGKVATPEQAQEVHAAIRDWLKKNVSSEVASKTRIIYGGSVNGSNCAELA 300

Query: 301 KKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 326
           KKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA
Sbjct: 301 KKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 306

[Close]

BLAST of Carg16194 vs. TrEMBL
Match: tr|A0A2R6RBQ8|A0A2R6RBQ8_ACTCH (Triosephosphate isomerase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc07276 PE=3 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 3.8e-128
Identity = 250/346 (72.25%), Postives = 273/346 (78.90%), Query Frame = 0


Query: 1   MAVVSTSLASQL-----SAIRLSTSKSDIS-------QTLFQNVHSQIRLASSRKGPRGV 60
           MAV STSL SQ+     S +R S SK D S       Q+LFQNV SQ+R +SSR+G RG+
Sbjct: 1   MAVASTSLVSQVSRPQFSGLRRSCSKQDHSLSLSAAAQSLFQNVDSQLRFSSSRRGSRGI 60

Query: 61  VTMAGSGK---------NGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVRSSLAP 120
           V MAGSGK         NGT ESI+KLVSDLN+ KLE DVDVVVAPPF+YIDQV++SL  
Sbjct: 61  VAMAGSGKFFVGGNWKCNGTTESISKLVSDLNSAKLETDVDVVVAPPFVYIDQVKNSLTD 120

Query: 121 RIEISAQNSWVSKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYAL 180
           RIEISAQNSW+ KGGAFTGEISVEQLKDIGCKWV+LGHSERRHVIGEDDQFIGKKAAYAL
Sbjct: 121 RIEISAQNSWIGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYAL 180

Query: 181 SEGLGVIACIGELLEEREAGKTFDVCFQQLKAYAGKLLAHSLFHFHDNLIITYLRRENCG 240
           SEGLGVIACIGELL+ERE GKTFDVCF+Q+KA+A                          
Sbjct: 181 SEGLGVIACIGELLKEREEGKTFDVCFKQMKAFAD------------------------- 240

Query: 241 TLYAVPSWDGIVIAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYG 300
              AVPSWD +V+AYEPVWAIGTGKVATP QAQEVH AVRDWL+KNVS EVASKTRIIYG
Sbjct: 241 ---AVPSWDNVVVAYEPVWAIGTGKVATPQQAQEVHVAVRDWLRKNVSEEVASKTRIIYG 300

Query: 301 GSVNGGNCAELAKKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 326
           GSVNGGNCAELAK+EDIDGFLVGGASLKGPEF TIVNSVT+KKVAA
Sbjct: 301 GSVNGGNCAELAKQEDIDGFLVGGASLKGPEFATIVNSVTSKKVAA 318

[Close]

BLAST of Carg16194 vs. TrEMBL
Match: tr|A0A2P4HHT6|A0A2P4HHT6_QUESU (Triosephosphate isomerase, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_61824 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.1e-127
Identity = 255/342 (74.56%), Postives = 274/342 (80.12%), Query Frame = 0


Query: 1   MAVVSTSLASQLSA----IRLSTSKSD----ISQTLFQNVHSQIRLASSRKGPRGVVTMA 60
           MAV STSLASQLSA    +R ++ K D     SQ+LFQ+V+S IRL SS K PRGVV MA
Sbjct: 1   MAVASTSLASQLSAQFSGLRRTSPKLDHSLSNSQSLFQHVNSHIRLTSSPKPPRGVVAMA 60

Query: 61  GSGK---------NGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVRSSLAPRIEI 120
           GSGK         NGTK+SITKL+SDLN+VKLE DVDVVVAPPF+YIDQV+++L+ RIEI
Sbjct: 61  GSGKFFVGGNWKCNGTKDSITKLISDLNSVKLETDVDVVVAPPFVYIDQVKNTLSDRIEI 120

Query: 121 SAQNSWVSKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGL 180
           S QNSWV KGGAFTGEISVEQLKDIG KWVILGHSERRHVIGEDDQFIGKKAAYALSEGL
Sbjct: 121 SGQNSWVGKGGAFTGEISVEQLKDIGAKWVILGHSERRHVIGEDDQFIGKKAAYALSEGL 180

Query: 181 GVIACIGELLEEREAGKTFDVCFQQLKAYAGKLLAHSLFHFHDNLIITYLRRENCGTLYA 240
           GVIACIGE LEERE+GKTFDVCFQQLKA+A                             A
Sbjct: 181 GVIACIGEKLEERESGKTFDVCFQQLKAFAD----------------------------A 240

Query: 241 VPSWDGIVIAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVN 300
           V SWD IVIAYEPVWAIGTGKVATP QAQEVH AVRDWLKKN+S EVASKTRIIYGGSVN
Sbjct: 241 VSSWDNIVIAYEPVWAIGTGKVATPMQAQEVHLAVRDWLKKNISAEVASKTRIIYGGSVN 300

Query: 301 GGNCAELAKKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 326
           GGNCAELAK+EDIDGFLVGGASLKGPEF TIVNSVT+KKVAA
Sbjct: 301 GGNCAELAKQEDIDGFLVGGASLKGPEFATIVNSVTSKKVAA 314

[Close]

BLAST of Carg16194 vs. TrEMBL
Match: tr|A0A2I4EWL2|A0A2I4EWL2_9ROSI (triosephosphate isomerase, chloroplastic OS=Juglans regia OX=51240 GN=LOC108993359 PE=3 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 9.5e-127
Identity = 250/340 (73.53%), Postives = 272/340 (80.00%), Query Frame = 0


Query: 1   MAVVSTSLASQLSA----IRLSTSKSD--ISQTLFQNVHSQIRLASSRKGPRGVVTMAGS 60
           MAV STSLASQLSA    +R S  K D   S +LFQ VHS IRL+SSRKG RGVV+MAG+
Sbjct: 1   MAVASTSLASQLSAQFSGLRRSCPKLDHSHSHSLFQQVHSHIRLSSSRKGSRGVVSMAGT 60

Query: 61  GK---------NGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVRSSLAPRIEISA 120
           GK         NGTKESITKLVSDLN+ KLE DVDVVVAPPF+YIDQV+++L  RIEIS 
Sbjct: 61  GKFFVGGNWKCNGTKESITKLVSDLNSAKLEADVDVVVAPPFIYIDQVKNTLNARIEISG 120

Query: 121 QNSWVSKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSEGLGV 180
           QNSWV KGGAFTGEISVEQL DIGCKWVILGHSERRH+IGEDDQFIGKKAAYALS+GLGV
Sbjct: 121 QNSWVGKGGAFTGEISVEQLNDIGCKWVILGHSERRHIIGEDDQFIGKKAAYALSQGLGV 180

Query: 181 IACIGELLEEREAGKTFDVCFQQLKAYAGKLLAHSLFHFHDNLIITYLRRENCGTLYAVP 240
           IAC+GE LEERE+GKTFDVCFQQLKA+A                             AVP
Sbjct: 181 IACVGEKLEERESGKTFDVCFQQLKAFAD----------------------------AVP 240

Query: 241 SWDGIVIAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNGG 300
           SW+ +VIAYEPVWAIGTGKVATP QAQEVH A+RDWL+KNVS EVASKTRIIYGGSVNGG
Sbjct: 241 SWENVVIAYEPVWAIGTGKVATPIQAQEVHVALRDWLRKNVSAEVASKTRIIYGGSVNGG 300

Query: 301 NCAELAKKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA 326
           N AEL+K+EDIDGFLVGGASLKGPEF TIVNSVT+KKVAA
Sbjct: 301 NSAELSKQEDIDGFLVGGASLKGPEFATIVNSVTSKKVAA 312

The following BLAST results are available for this feature:

BLAST of Carg16194 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512787.1	6.2e-154	88.32	triosephosphate isomerase, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022987010.1	5.2e-153	88.02	triosephosphate isomerase, chloroplastic-like [Cucurbita maxima]	[more]
XP_022944549.1	6.8e-153	88.02	triosephosphate isomerase, chloroplastic-like [Cucurbita moschata]	[more]
XP_022146193.1	2.1e-146	83.23	triosephosphate isomerase, chloroplastic [Momordica charantia]	[more]
XP_022947479.1	4.4e-144	82.63	triosephosphate isomerase, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of Carg16194 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21170.1	1.1e-120	68.22	triosephosphate isomerase	[more]
AT3G55440.1	3.4e-74	52.96	triosephosphate isomerase	[more]

BLAST of Carg16194 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P48496\|TPIC_SPIOL	1.1e-125	70.29	Triosephosphate isomerase, chloroplastic OS=Spinacia oleracea OX=3562 GN=TPIP1 P...	[more]
sp\|Q9M4S8\|TPIC_FRAAN	4.0e-120	69.86	Triosephosphate isomerase, chloroplastic OS=Fragaria ananassa OX=3747 GN=TPI PE=...	[more]
sp\|Q9SKP6\|TPIC_ARATH	2.0e-119	68.22	Triosephosphate isomerase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIM ...	[more]
sp\|P46225\|TPIC_SECCE	4.5e-108	71.48	Triosephosphate isomerase, chloroplastic OS=Secale cereale OX=4550 PE=1 SV=1	[more]
sp\|P48497\|TPIS_STELP	3.0e-91	61.99	Triosephosphate isomerase, cytosolic OS=Stellaria longipes OX=19744 GN=TPI PE=2 ...	[more]

BLAST of Carg16194 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LJ13\|A0A0A0LJ13_CUCSA	6.7e-141	81.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G263900 PE=3 SV=1	[more]
tr\|A0A1S3C5Y3\|A0A1S3C5Y3_CUCME	2.0e-140	81.14	triosephosphate isomerase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497295...	[more]
tr\|A0A2R6RBQ8\|A0A2R6RBQ8_ACTCH	3.8e-128	72.25	Triosephosphate isomerase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CE...	[more]
tr\|A0A2P4HHT6\|A0A2P4HHT6_QUESU	1.1e-127	74.56	Triosephosphate isomerase, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_6182...	[more]
tr\|A0A2I4EWL2\|A0A2I4EWL2_9ROSI	9.5e-127	73.53	triosephosphate isomerase, chloroplastic OS=Juglans regia OX=51240 GN=LOC1089933...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006096	glycolytic process
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0004807	triose-phosphate isomerase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR035990	TIM_sf
IPR022896	TrioseP_Isoase_bac/euk
IPR020861	Triosephosphate_isomerase_AS
IPR013785	Aldolase_TIM
IPR000652	Triosephosphate_isomerase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015976	carbon utilization
biological_process	GO:0006000	fructose metabolic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0046486	glycerolipid metabolic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006020	inositol metabolic process
biological_process	GO:0006013	mannose metabolic process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004807	triose-phosphate isomerase activity
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16194-RA	Carg16194-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000652	Triosephosphate isomerase	PFAM	PF00121	TIM	coord: 226..315 e-value: 1.2E-36 score: 126.2 coord: 57..212 e-value: 2.7E-41 score: 141.5
IPR000652	Triosephosphate isomerase	TIGRFAM	TIGR00419	TIGR00419	coord: 57..307 e-value: 9.7E-72 score: 239.4
IPR000652	Triosephosphate isomerase	PANTHER	PTHR21139	TRIOSEPHOSPHATE ISOMERASE	coord: 223..319
IPR000652	Triosephosphate isomerase	PANTHER	PTHR21139	TRIOSEPHOSPHATE ISOMERASE	coord: 57..196
IPR000652	Triosephosphate isomerase	PROSITE	PS51440	TIM_2	coord: 48..317 score: 75.097
IPR000652	Triosephosphate isomerase	CDD	cd00311	TIM	coord: 57..316 e-value: 4.46422E-115 score: 334.89
IPR013785	Aldolase-type TIM barrel	GENE3D	G3DSA:3.20.20.70		coord: 51..213 e-value: 3.7E-52 score: 179.1 coord: 214..325 e-value: 1.1E-41 score: 144.7
None	No IPR available	PANTHER	PTHR21139:SF15	TRIOSEPHOSPHATE ISOMERASE	coord: 57..196
None	No IPR available	PANTHER	PTHR21139:SF15	TRIOSEPHOSPHATE ISOMERASE	coord: 223..319
IPR020861	Triosephosphate isomerase, active site	PROSITE	PS00171	TIM_1	coord: 233..243
IPR022896	Triosephosphate isomerase, bacterial/eukaryotic	HAMAP	MF_00147_B	TIM_B	coord: 55..317 score: 53.034
IPR035990	Triosephosphate isomerase superfamily	SUPERFAMILY	SSF51351	Triosephosphate isomerase (TIM)	coord: 225..318 coord: 57..198

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg16194	Cla001664	Watermelon (97103) v1	carwmB0337
Carg16194	Csa2G263900	Cucumber (Chinese Long) v2	carcuB0377
Carg16194	MELO3C020780	Melon (DHL92) v3.5.1	carmeB0349
Carg16194	ClCG02G011400	Watermelon (Charleston Gray)	carwcgB0338
Carg16194	CSPI02G13130	Wild cucumber (PI 183967)	carcpiB0380
Carg16194	Cucsa.169250	Cucumber (Gy14) v1	carcgyB0409
Carg16194	CmaCh02G003300	Cucurbita maxima (Rimu)	carcmaB0488
Carg16194	CmaCh20G007700	Cucurbita maxima (Rimu)	carcmaB0486
Carg16194	CmoCh02G003250	Cucurbita moschata (Rifu)	carcmoB0475
Carg16194	CmoCh20G007700	Cucurbita moschata (Rifu)	carcmoB0473
Carg16194	Lsi10G004620	Bottle gourd (USVL1VR-Ls)	carlsiB314
Carg16194	Cp4.1LG16g03110	Cucurbita pepo (Zucchini)	carcpeB0485
Carg16194	Cp4.1LG05g13170	Cucurbita pepo (Zucchini)	carcpeB0490
Carg16194	CsGy2G013080	Cucumber (Gy14) v2	carcgybB0356
Carg16194	MELO3C020780.2	Melon (DHL92) v3.6.1	carmedB0355
Carg16194	CsaV3_2G015690	Cucumber (Chinese Long) v3	carcucB0381
Carg16194	Cla97C02G037100	Watermelon (97103) v2	carwmbB0361
Carg16194	Bhi10G001507	Wax gourd	carwgoB0432

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg16194	Carg19800	Silver-seed gourd	carcarB374

The following block(s) are covering this gene:


Gene	Organism	Block
Carg16194	Silver-seed gourd	carcarB161
Carg16194	Cucurbita maxima (Rimu)	carcmaB0493
Carg16194	Watermelon (Charleston Gray)	carwcgB0339
Carg16194	Watermelon (97103) v1	carwmB0338
Carg16194	Watermelon (97103) v2	carwmbB0362