Carg16106 (gene) Silver-seed gourd

NameCarg16106
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_068 : 125672 .. 127083 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACACGTGCCGCTCCCGATTACATTATTAGCCCAAACGACCCGTCGGACTCTTAACAACTCACATTGTGCAGCAACCCTTCACCTGTTTTCTTGGAGTGTTTCTTCTCCGGTGGAGACTTTCTCGATTCTCTCTAATATTCGGAATTCCAATACCGGCTTTGCGGCATCCGTACAGATTCCGGTAATCCTTGATCGGAAAACAGAACTCTGCAAATATCATTCATCATCTCTCTCTATTAATGCAATTTGATTTTCTTGTTGTATCTTCAATTGCAGGATAATCGGGCGTTCTTTTCCGTTCGCGTCGCGGGCGTTGGACTCATCTAGTCTCTGACTATTATCTGATTCTTTTTCAATTCATGACCGAGTTTTCTTTTTCTTCTTTTAATTTCTGAGAATTTCTGGTAGGCGCGGAAGAAGAATTTTGCTGATGATAATCTGTTGTTTGTGATACGATACTGGAATCGTGGTTAGGCGTTTTAGGTCAATACAGCAGAGTTGAGCAATTCGATTTCTCTTCTTCCGTGTTTGTTTCTTTATTCTGTGGGAGAAAGAATCGTATCGGTCAATTTTTATAGCGAAAAGTGGAAAGGATTCCGTCTGTATTCTTTCCGTAACCTAAATTGATAATTGAAGAAAGTTTTTGGGACTATTCTTGTGAGAATGGATCGGGAGGAGAAAAGGTTCGTATCGTAGCTATACATCGTTGAAATCAAGTCTAATTTGAAAGCCCTAGGAGGAGGAAGTGGTTGAGATTGTGAAATTAGTGTGAGAGGCGTTTTGAAATGGCGGAATCGGATAACGAATCGGGAGGGCACAACAGCAACGCGAACAGCGAGCTGTCTGCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGTTACCAGCAAACGCGAAGATCTCAAAAGATGCAAAAGAAACGGTACAAGAGTGCGTGTCGGAGTTTATAAGCTTCATAACAGGAGAGGCGTCAGACAAGTGCCAGAGAGAGAAGAGGAAGACAATCAACGGCGACGATTTGCTGTGGGCCATGACGACGCTAGGATTCGAAGAGTATGTGGAACCGCTCAAGACTTATCTGCAGAAGTACAGGGAATTGGAAGGGGAAAAGAGCACTATGGGGAGACAGGGGGAGAAAGACGGTAGTGGTGGTGGTGGGCCCAGCGGCAGTGGTGCTAGTGGTGGAGTCAACTCTAGTACTGGTGGTGGTGGTGGTGTTGGCGGCGGTGGATTCAACGGAGTGGGTGGAATGTATGGTGGGATGATGATGATGGGGCATCATCAGGGAGGCGTTTATGGCAGTAGTGGTGGATATCATCACATGGGAATCGGCGGAGGGAAGGAAGGAAATAGTGGTTCCCGGTAGTGGAGGCGGCGGCGGT

mRNA sequence

ATGCAACACGTGCCGCTCCCGATTACATTATTAGCCCAAACGACCCGTCGGACTCTTAACAACTCACATTGTGCAGCAACCCTTCACCTGTTTTCTTGGAGTGTTTCTTCTCCGGTGGAGACTTTCTCGATTCTCTCTAATATTCGGAATTCCAATACCGGCTTTGCGGCATCCGTACAGATTCCGGATAATCGGGCGTTCTTTTCCGTTCGCGTCGCGGGCGTTGGACTCATCTAGTCTCTGACTATTATCTGATTCTTTTTCAATTCATGACCGAGTTTTCTTTTTCTTCTTTTAATTTCTGAGAATTTCTGGTAGGCGCGGAAGAAGAATTTTGCTGATGATAATCTGTTGTTTGTGATACGATACTGGAATCGTGGTTAGGCGTTTTAGGTCAATACAGCAGAGTTGAGCAATTCGATTTCTCTTCTTCCGTGTTTGTTTCTTTATTCTGTGGGAGAAAGAATCGTATCGGTCAATTTTTATAGCGAAAAGTGGAAAGGATTCCGTCTGTATTCTTTCCGTAACCTAAATTGATAATTGAAGAAAGTTTTTGGGACTATTCTTGTGAGAATGGATCGGGAGGAGAAAAGGTTCGTATCGTAGCTATACATCGTTGAAATCAAGTCTAATTTGAAAGCCCTAGGAGGAGGAAGTGGTTGAGATTGTGAAATTAGTGTGAGAGGCGTTTTGAAATGGCGGAATCGGATAACGAATCGGGAGGGCACAACAGCAACGCGAACAGCGAGCTGTCTGCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGTTACCAGCAAACGCGAAGATCTCAAAAGATGCAAAAGAAACGGTACAAGAGTGCGTGTCGGAGTTTATAAGCTTCATAACAGGAGAGGCGTCAGACAAGTGCCAGAGAGAGAAGAGGAAGACAATCAACGGCGACGATTTGCTGTGGGCCATGACGACGCTAGGATTCGAAGAGTATGTGGAACCGCTCAAGACTTATCTGCAGAAGTACAGGGAATTGGAAGGGGAAAAGAGCACTATGGGGAGACAGGGGGAGAAAGACGGTAGTGGTGGTGGTGGGCCCAGCGGCAGTGGTGCTAGTGGTGGAGTCAACTCTAGTACTGGTGGTGGTGGTGGTGTTGGCGGCGGTGGATTCAACGGAGTGGGTGGAATGTATGGTGGGATGATGATGATGGGGCATCATCAGGGAGGCGTTTATGGCAGTAGTGGTGGATATCATCACATGGGAATCGGCGGAGGGAAGGAAGGAAATAGTGGTTCCCGGTAGTGGAGGCGGCGGCGGT

Coding sequence (CDS)

ATGCAACACGTGCCGCTCCCGATTACATTATTAGCCCAAACGACCCGTCGGACTCTTAACAACTCACATTGTGCAGCAACCCTTCACCTGTTTTCTTGGAGTGTTTCTTCTCCGGTGGAGACTTTCTCGATTCTCTCTAATATTCGGAATTCCAATACCGGCTTTGCGGCATCCGTACAGATTCCGGATAATCGGGCGTTCTTTTCCGTTCGCGTCGCGGGCGTTGGACTCATCTAG

Protein sequence

MQHVPLPITLLAQTTRRTLNNSHCAATLHLFSWSVSSPVETFSILSNIRNSNTGFAASVQIPDNRAFFSVRVAGVGLI
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16106-RACarg16106-RAmRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg16106CmoCh20G006810Cucurbita moschata (Rifu)carcmoB0473
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg16106Watermelon (Charleston Gray)carwcgB0334
Carg16106Watermelon (Charleston Gray)carwcgB0336
Carg16106Watermelon (Charleston Gray)carwcgB0340
Carg16106Watermelon (97103) v1carwmB0331
Carg16106Watermelon (97103) v1carwmB0334
Carg16106Watermelon (97103) v2carwmbB0357
Carg16106Watermelon (97103) v2carwmbB0358
Carg16106Watermelon (97103) v2carwmbB0363
Carg16106Wax gourdcarwgoB0428
Carg16106Wax gourdcarwgoB0429
Carg16106Wax gourdcarwgoB0433
Carg16106Silver-seed gourdcarcarB232
Carg16106Silver-seed gourdcarcarB372
Carg16106Silver-seed gourdcarcarB378
Carg16106Cucumber (Gy14) v2carcgybB0357
Carg16106Cucumber (Gy14) v2carcgybB0361
Carg16106Cucumber (Gy14) v1carcgyB0404
Carg16106Cucumber (Gy14) v1carcgyB0405
Carg16106Cucumber (Gy14) v1carcgyB0408
Carg16106Cucurbita maxima (Rimu)carcmaB0483
Carg16106Cucurbita maxima (Rimu)carcmaB0484
Carg16106Cucurbita maxima (Rimu)carcmaB0486
Carg16106Cucurbita maxima (Rimu)carcmaB0487
Carg16106Cucurbita moschata (Rifu)carcmoB0470
Carg16106Cucurbita moschata (Rifu)carcmoB0471
Carg16106Cucurbita moschata (Rifu)carcmoB0474
Carg16106Cucurbita pepo (Zucchini)carcpeB0484
Carg16106Cucurbita pepo (Zucchini)carcpeB0485
Carg16106Cucurbita pepo (Zucchini)carcpeB0487
Carg16106Cucurbita pepo (Zucchini)carcpeB0489
Carg16106Wild cucumber (PI 183967)carcpiB0381
Carg16106Wild cucumber (PI 183967)carcpiB0387
Carg16106Cucumber (Chinese Long) v2carcuB0378
Carg16106Cucumber (Chinese Long) v2carcuB0384
Carg16106Cucumber (Chinese Long) v3carcucB0382
Carg16106Cucumber (Chinese Long) v3carcucB0386
Carg16106Bottle gourd (USVL1VR-Ls)carlsiB315
Carg16106Bottle gourd (USVL1VR-Ls)carlsiB316
Carg16106Melon (DHL92) v3.5.1carmeB0350
Carg16106Melon (DHL92) v3.6.1carmedB0356