Carg16098 (gene) Silver-seed gourd

Overview
NameCarg16098
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionChaperone protein htpG family protein
LocationCucurbita_argyrosperma_scaffold_068 : 88028 .. 90152 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTAAAAATACGTCGACCAAAATTATCGGTAAACCCTACTAAAGCCCTTCCCACCTTCCCCTCTGTGAGTTATTCTGTGATTTCAATGCTTTCCCTTACTTCATTCGAGTTTCTACAATATGCACAAGCTCTCCAGACGCGCTGTCTCTGCTATTCTTGGCACTGGTGGAGCTCTACCGCCGTAATGCTGCCTCCGCTTTAGCTCCGGCCACCCATGCCTCAGTCCTTACCAATACGGTCTGTGTTCTTTGTCCAAAACGTGAAAACTTCTGTCTGTGTCGTTTTGATGCTTCGGACTTGACATTTTCTTATATCTTTGATGATGGAGTATTTCTGTGTGGGAGGGTTCTGAAATGGGTATAATTAATTGAAATGTTGATAGTTTGTATTACCTGAGTTGAATGTTTTGTGCCTTGGTTGTTCTTTTTTTTTTTTTTTTTTCTCTTTGGTTTAATGATATATTTTGAATCGTCGATGTTGATGAATAGCCTAGTATCTACGATCAACCTTTTGGCGTTTAGATAGAAGTAAAGTATTCCGTAAATGAGTAAGTTTTATTGGGTACTATTTCATTTAATTCAGTATTGTTTTCGTGCTTGGAAGGTCTCTCCGCACCTATTTGAGATTAAGATATTTTGTTGGATTGTTCATATTTGACGGTCATGTCGAGGATGGTTGGGAAAGCATCCTACATCGGCTAATTAAGGGGATGATCATGGGTTTATAAGTAAGAAATAGATCTCCATTGGTATGAGGTCTTTTGGGAAAACCAAAAGCAAAGCCATGAGAGCTAATGCTCAAAGTGGACAATATCATACCATTGTGGAGGTTCGTGATTTCTAACGGATTAAAATCCATGTTTTAGACTTTGAAGGTCTCCTTGTTGCATTATTATGGTGGTTTATGTTGAAAGTTTAGCTTTGTGCTTCTCTGTTTTGGTGTTGAACTACTCTGCTGGATTGTTGATTTTCTGAAATATGGAATGGATAATCACATATGCTTGACAATTTTCAGGTGGGCGAGATTGATGGTAAAGTCAGACGGTACCCATTGCTAGCGTCTGGACATTTGGATAAAACATACTTTTTCCTTGACCCACCGATTTGAATCAACTGCCACAGCATCTGATGCATCGGCTACTCCTCCAGTTGAGAATTACGAGTATCAAGCAGAGGCATGTTCCTTTGAATATGAAACTATATACTAATTTGGAACTAAAATCTTAATGTTTAAGTTCACCAATCACCTTTTATATTCGTGTTTCTTTTTCGTGCCAGGTGAGTCGTCTCATGGACCTCATTGTTAACAGCTTGTACAGCAACAAAGAGGCTTTTCTTCGGGAGCTTATAAGGTTATTTATTATCAATGTTTGGCTCGTTTCTTTTTCTAGAAGCTTACCTTTTGATACCTGAATTGAATATTGGTTTCTGCCTCTTCAACCTTCACAGCAATGCAAGTGATGCTTTGGATAAACTGCGCTTTCTGAGTGTGACAGGCCCTGGACTTTTGAAGGAAGCAATTGATTTTCACATATGTATCCATAGTGATAAAGATAATGGGATTATAAGCATAATGTAAGGGTTCTGCTATTTTGCATCCCCCCCCCCTCCTCCTCCATACCGACAATGCTGCAACATTTGCAACCTGTTTTCTATCTCTATGCAGTGATACTGGCATAGGTATGACTAGGCAAGAACTTGTTGACTGCCTTGGTACTATTGCCCAGAGTAGTCTGTCTGTCTTCTTTCATCCTCACTTCTCCAACACTCTATTGGGAAACTATGGGATGACAGCTTACACAACAGAATCTATTAATTGTAATCTAATTAATGATTTTTCTTTACAGAAGAAGAAGAAGAAAACAGAGACTGTTGTGTAGAAGTACTGGGATTGGGAGCTCACTAATGAGACCCAACCAATATGGGTGAGCTCACAACTTCTTTACTTTCCTGTTTTGTTGTTAAATCGCTGTTACTTCTAAGCAACTAAAGGGTGCTATTCCTATATGTATTTGTAGCTTCGGAACCCGAAGGAAGTCTCCACGGAGGAGTACAATGAATTCTACAGAAAAACTTCCAATGAGTACTTGGATCCATTAGCATCATCTCATTTTACAACGGAG

mRNA sequence

ATGGTTAAAAATACGTCGACCAAAATTATCGACGCGCTGTCTCTGCTATTCTTGGCACTGGTGGAGCTCTACCGCCGTAATGCTGCCTCCGCTTTAGCTCCGGCCACCCATGCCTCAGTCCTTACCAATACGGTGAGTCGTCTCATGGACCTCATTGTTAACAGCTTGTACAGCAACAAAGAGGCTTTTCTTCGGGAGCTTATAAGCAATGCAAGTGATGCTTTGGATAAACTGCGCTTTCTGAGTGTGACAGGCCCTGGACTTTTGAAGGAAGCAATTGATTTTCACATATGTATCCATAGTGATAAAGATAATGGGATTATAAGCATAATTGATACTGGCATAGAAGAAGAAGAAGAAAACAGAGACTGTTGTGTAGAACTTCGGAACCCGAAGGAAGTCTCCACGGAGGAGTACAATGAATTCTACAGAAAAACTTCCAATGAGTACTTGGATCCATTAGCATCATCTCATTTTACAACGGAG

Coding sequence (CDS)

ATGGTTAAAAATACGTCGACCAAAATTATCGACGCGCTGTCTCTGCTATTCTTGGCACTGGTGGAGCTCTACCGCCGTAATGCTGCCTCCGCTTTAGCTCCGGCCACCCATGCCTCAGTCCTTACCAATACGGTGAGTCGTCTCATGGACCTCATTGTTAACAGCTTGTACAGCAACAAAGAGGCTTTTCTTCGGGAGCTTATAAGCAATGCAAGTGATGCTTTGGATAAACTGCGCTTTCTGAGTGTGACAGGCCCTGGACTTTTGAAGGAAGCAATTGATTTTCACATATGTATCCATAGTGATAAAGATAATGGGATTATAAGCATAATTGATACTGGCATAGAAGAAGAAGAAGAAAACAGAGACTGTTGTGTAGAACTTCGGAACCCGAAGGAAGTCTCCACGGAGGAGTACAATGAATTCTACAGAAAAACTTCCAATGAGTACTTGGATCCATTAGCATCATCTCATTTTACAACGGAG

Protein sequence

MVKNTSTKIIDALSLLFLALVELYRRNAASALAPATHASVLTNTVSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKDNGIISIIDTGIEEEEENRDCCVELRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE
Homology
[Close]
BLAST of Carg16098 vs. NCBI nr
Match: KJB10747.1 (hypothetical protein B456_001G220600 [Gossypium raimondii])

HSP 1 Score: 128.3 bits (321), Expect = 2.4e-26
Identity = 90/213 (42.25%), Postives = 100/213 (46.95%), Query Frame = 0 

Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRLMDLIVNSLYSNKE FLRELISNASDALDKLR+LSVT P L K+A+D  I I +DKD
Sbjct: 104 VSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLSVTDPQLSKDAVDLDIRIQTDKD 163

Query: 105 NGIISIIDTGI-EEEEENRDCC-------------------------------------- 163
           NGII+I D+GI    +E  DC                                       
Sbjct: 164 NGIITITDSGIGMTRQELVDCLGTIAQSGTAKFLKAVKESKDAGTDNNLIGQFGVGFYSA 223

[Close]
BLAST of Carg16098 vs. NCBI nr
Match: XP_008464175.1 (PREDICTED: heat shock protein 90-6, mitochondrial [Cucumis melo])

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-23
Identity = 66/81 (81.48%), Postives = 69/81 (85.19%), Query Frame = 0 

Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRLMDLIVNSLYSNKE FLRELISNASDALDKLRFLSVT PGLLKEAIDF I I +DKD
Sbjct: 103 VSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRFLSVTDPGLLKEAIDFDIRIQTDKD 162

Query: 105 NGIISIIDTGI-EEEEENRDC 125
           NGI+SI DTGI    +E  DC
Sbjct: 163 NGILSITDTGIGMTRQELVDC 183


HSP 2 Score: 68.2 bits (165), Expect = 3.0e-08
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 0 

Query: 101 SDKDNGIISIIDTGIEEEEENRDCCVELRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFT 160
           ++K     ++++   + E  N    + LRNPKEVSTE+YNEFY+KT NEYLDPLASSHFT
Sbjct: 333 TEKKKKTKTVVEKYWDWELTNETQPIWLRNPKEVSTEDYNEFYKKTFNEYLDPLASSHFT 392

Query: 161 TE 163
           TE
Sbjct: 393 TE 394

[Close]
BLAST of Carg16098 vs. NCBI nr
Match: KHN46925.1 (Heat shock protein 90 [Glycine soja])

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-23
Identity = 66/81 (81.48%), Postives = 69/81 (85.19%), Query Frame = 0 

Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRLMDLIVNSLYSNKE FLRELISNASDALDKLRFLSVT PGLLKEA+DF I I +DKD
Sbjct: 103 VSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRFLSVTEPGLLKEAVDFDIRIQADKD 162

Query: 105 NGIISIIDTGI-EEEEENRDC 125
           NGIISI DTGI    +E  DC
Sbjct: 163 NGIISITDTGIGMTRQELVDC 183


HSP 2 Score: 65.5 bits (158), Expect = 1.9e-07
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 0 

Query: 128 LRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE 163
           LRNPKEV+ EEYNEFY+KT NEYL+PLASSHFTTE
Sbjct: 356 LRNPKEVTKEEYNEFYKKTFNEYLEPLASSHFTTE 390

[Close]
BLAST of Carg16098 vs. NCBI nr
Match: XP_003545075.3 (heat shock protein 90-6, mitochondrial [Glycine max] >KRH14117.1 hypothetical protein GLYMA_14G007700 [Glycine max])

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-23
Identity = 66/81 (81.48%), Postives = 69/81 (85.19%), Query Frame = 0 

Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRLMDLIVNSLYSNKE FLRELISNASDALDKLRFLSVT PGLLKEA+DF I I +DKD
Sbjct: 103 VSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRFLSVTEPGLLKEAVDFDIRIQADKD 162

Query: 105 NGIISIIDTGI-EEEEENRDC 125
           NGIISI DTGI    +E  DC
Sbjct: 163 NGIISITDTGIGMTRQELVDC 183


HSP 2 Score: 65.5 bits (158), Expect = 1.9e-07
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 0 

Query: 128 LRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE 163
           LRNPKEV+ EEYNEFY+KT NEYL+PLASSHFTTE
Sbjct: 360 LRNPKEVTKEEYNEFYKKTFNEYLEPLASSHFTTE 394

[Close]
BLAST of Carg16098 vs. NCBI nr
Match: XP_014504491.1 (heat shock protein 90-6, mitochondrial [Vigna radiata var. radiata])

HSP 1 Score: 119.0 bits (297), Expect = 1.5e-23
Identity = 66/89 (74.16%), Postives = 72/89 (80.90%), Query Frame = 0 

Query: 27  NAASALAPATHASVLTNTVSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGP 86
           ++AS+  PA         VSRLMDLIVNSLYSNKE FLRELISNASDALDKLRFLSVT P
Sbjct: 85  SSASSSTPAERYEYQAE-VSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRFLSVTEP 144

Query: 87  GLLKEAIDFHICIHSDKDNGIISIIDTGI 116
           GLLK+A+DF I I +DKDNGIISI DTGI
Sbjct: 145 GLLKDAVDFDIRIQTDKDNGIISITDTGI 172


HSP 2 Score: 64.3 bits (155), Expect = 4.3e-07
Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 0 

Query: 109 SIIDTGIEEEEENRDCCVELRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE 163
           ++++   + E  N    + LRNPKEV+ EEYNEFY+KT NEYL+PLASSHFTTE
Sbjct: 347 TVVEKYWDWELTNETQPIWLRNPKEVTKEEYNEFYKKTFNEYLEPLASSHFTTE 400

[Close]
BLAST of Carg16098 vs. TAIR10
Match: AT3G07770.1 (HEAT SHOCK PROTEIN 89.1)

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-22
Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 0 

Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRLMDLIVNSLYSNKE FLRELISNASDALDKLR+LSVT P L K+A D  I I++DK+
Sbjct: 103 VSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLSVTNPELSKDAPDLDIRIYADKE 162

Query: 105 NGIISIIDTGI-EEEEENRDC 125
           NGII++ D+GI    +E  DC
Sbjct: 163 NGIITLTDSGIGMTRQELVDC 183


HSP 2 Score: 66.2 bits (160), Expect = 2.1e-11
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 0 

Query: 128 LRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE 163
           LRNPKEV+T EYNEFYRK  NEYLDPLASSHFTTE
Sbjct: 360 LRNPKEVTTAEYNEFYRKAFNEYLDPLASSHFTTE 394

[Close]
BLAST of Carg16098 vs. TAIR10
Match: AT4G24190.1 (Chaperone protein htpG family protein)

HSP 1 Score: 78.2 bits (191), Expect = 5.3e-15
Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = 0 

Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKE--AIDFHICIHSD 104
           VSRLMD+I+NSLYSNK+ FLRELISNASDALDK+RFL++T   +L E       I I  D
Sbjct: 85  VSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKDVLGEGDTAKLEIQIKLD 144

Query: 105 KDNGIISIIDTGIEEEEEN 122
           K   I+SI D GI   +E+
Sbjct: 145 KAKKILSIRDRGIGMTKED 163

[Close]
BLAST of Carg16098 vs. TAIR10
Match: AT2G04030.1 (Chaperone protein htpG family protein)

HSP 1 Score: 77.8 bits (190), Expect = 6.9e-15
Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 0 

Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICI 100
           VSRL+DLIV+SLYS+KE FLREL+SNASDALDKLRFLSVT P LL +  D  I I
Sbjct: 85  VSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDGGDLEIRI 139


HSP 2 Score: 53.5 bits (127), Expect = 1.4e-07
Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 0 

Query: 128 LRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE 163
           +RN KEV   EYNEFY+K  NE+LDPLA +HFTTE
Sbjct: 337 MRNSKEVEKGEYNEFYKKAFNEFLDPLAHTHFTTE 371

[Close]
BLAST of Carg16098 vs. TAIR10
Match: AT5G52640.1 (heat shock protein 90.1)

HSP 1 Score: 74.3 bits (181), Expect = 7.6e-14
Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 0 

Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           +++L+ LI+N+ YSNKE FLRELISN+SDALDK+RF S+T    L    +  I +  DK 
Sbjct: 18  INQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRLVPDKS 77

Query: 105 NGIISIIDTGI 116
           N  +SIID+GI
Sbjct: 78  NKTLSIIDSGI 88


HSP 2 Score: 37.0 bits (84), Expect = 1.3e-02
Identity = 19/47 (40.43%), Postives = 29/47 (61.70%), Query Frame = 0 

Query: 116 EEEEENRDCCVELRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE 163
           E E  N+   + LR P+E++ EEY  FY+  +N++ D LA  HF+ E
Sbjct: 263 EWELINKQKPIWLRKPEEITKEEYAAFYKSLTNDWEDHLAVKHFSVE 309

[Close]
BLAST of Carg16098 vs. TAIR10
Match: AT5G56000.1 (HEAT SHOCK PROTEIN 81.4)

HSP 1 Score: 74.3 bits (181), Expect = 7.6e-14
Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 0 

Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           +++L+ LI+N+ YSNKE FLRELISN+SDALDK+RF S+T    L    +  I I  DK 
Sbjct: 13  INQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKT 72

Query: 105 NGIISIIDTGI 116
           N  ++IID+GI
Sbjct: 73  NNTLTIIDSGI 83

[Close]
BLAST of Carg16098 vs. Swiss-Prot
Match: sp|F4JFN3|HS906_ARATH (Heat shock protein 90-6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HSP90-6 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.1e-21
Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 0 

Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRLMDLIVNSLYSNKE FLRELISNASDALDKLR+LSVT P L K+A D  I I++DK+
Sbjct: 103 VSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLSVTNPELSKDAPDLDIRIYADKE 162

Query: 105 NGIISIIDTGI-EEEEENRDC 125
           NGII++ D+GI    +E  DC
Sbjct: 163 NGIITLTDSGIGMTRQELVDC 183


HSP 2 Score: 66.2 bits (160), Expect = 3.7e-10
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 0 

Query: 128 LRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE 163
           LRNPKEV+T EYNEFYRK  NEYLDPLASSHFTTE
Sbjct: 360 LRNPKEVTTAEYNEFYRKAFNEYLDPLASSHFTTE 394

[Close]
BLAST of Carg16098 vs. Swiss-Prot
Match: sp|Q22235|ENPL1_CAEEL (Endoplasmin homolog OS=Caenorhabditis elegans OX=6239 GN=enpl-1 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.7e-16
Identity = 41/71 (57.75%), Postives = 55/71 (77.46%), Query Frame = 0 

Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           V+R+M LI+NSLY NKE FLRELISNASDALDK+R LS+T P  L+E  +  + I +D++
Sbjct: 70  VNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDPEQLRETEEMSVKIKADRE 129

Query: 105 NGIISIIDTGI 116
           N ++ I DTG+
Sbjct: 130 NRLLHITDTGV 140

[Close]
BLAST of Carg16098 vs. Swiss-Prot
Match: sp|P41887|HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=swo1 PE=1 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 2.9e-15
Identity = 43/71 (60.56%), Postives = 54/71 (76.06%), Query Frame = 0 

Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           +S+LM LI+N++YSNKE FLRELISNASDALDK+R+ S++ P  L    D  I I  DK+
Sbjct: 13  ISQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPHALDAEKDLFIRITPDKE 72

Query: 105 NGIISIIDTGI 116
           N I+SI DTGI
Sbjct: 73  NKILSIRDTGI 83


HSP 2 Score: 38.5 bits (88), Expect = 8.3e-02
Identity = 17/34 (50.00%), Postives = 23/34 (67.65%), Query Frame = 0 

Query: 129 RNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE 163
           RNP EV+ EEY  FY+  +N++ D LA  HF+ E
Sbjct: 274 RNPSEVTKEEYASFYKSLTNDWEDHLAVKHFSVE 307

[Close]
BLAST of Carg16098 vs. Swiss-Prot
Match: sp|P36183|ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.9e-14
Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 0 

Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKE--AIDFHICIHSD 104
           VSRLMD+I+NSLYSNK+ FLRELISNASDALDK+RFL++T   ++ E       I I  D
Sbjct: 86  VSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKEVMGEGDTAKLEIQIKLD 145

Query: 105 KDNGIISIIDTGIEEEEEN 122
           K+N I+SI D G+   +E+
Sbjct: 146 KENKILSIRDRGVGMTKED 164

[Close]
BLAST of Carg16098 vs. Swiss-Prot
Match: sp|Q9BLC5|HSP83_BOMMO (Heat shock protein 83 OS=Bombyx mori OX=7091 GN=Hsp83 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.5e-14
Identity = 39/71 (54.93%), Postives = 54/71 (76.06%), Query Frame = 0 

Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           +++LM LI+N+ YSNKE FLRELISN+SDALDK+R+ S+T P  L    + +I I  +K+
Sbjct: 21  IAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKN 80

Query: 105 NGIISIIDTGI 116
            G ++IIDTGI
Sbjct: 81  EGTLTIIDTGI 91

[Close]
BLAST of Carg16098 vs. TrEMBL
Match: tr|A0A0D2M1M3|A0A0D2M1M3_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G220600 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.6e-26
Identity = 90/213 (42.25%), Postives = 100/213 (46.95%), Query Frame = 0 

Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRLMDLIVNSLYSNKE FLRELISNASDALDKLR+LSVT P L K+A+D  I I +DKD
Sbjct: 104 VSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLSVTDPQLSKDAVDLDIRIQTDKD 163

Query: 105 NGIISIIDTGI-EEEEENRDCC-------------------------------------- 163
           NGII+I D+GI    +E  DC                                       
Sbjct: 164 NGIITITDSGIGMTRQELVDCLGTIAQSGTAKFLKAVKESKDAGTDNNLIGQFGVGFYSA 223

[Close]
BLAST of Carg16098 vs. TrEMBL
Match: tr|A0A0R0GHB3|A0A0R0GHB3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100806710 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.5e-24
Identity = 66/81 (81.48%), Postives = 69/81 (85.19%), Query Frame = 0 

Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRLMDLIVNSLYSNKE FLRELISNASDALDKLRFLSVT PGLLKEA+DF I I +DKD
Sbjct: 103 VSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRFLSVTEPGLLKEAVDFDIRIQADKD 162

Query: 105 NGIISIIDTGI-EEEEENRDC 125
           NGIISI DTGI    +E  DC
Sbjct: 163 NGIISITDTGIGMTRQELVDC 183


HSP 2 Score: 65.5 bits (158), Expect = 1.3e-07
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 0 

Query: 128 LRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE 163
           LRNPKEV+ EEYNEFY+KT NEYL+PLASSHFTTE
Sbjct: 360 LRNPKEVTKEEYNEFYKKTFNEYLEPLASSHFTTE 394

[Close]
BLAST of Carg16098 vs. TrEMBL
Match: tr|A0A1S3CKV8|A0A1S3CKV8_CUCME (heat shock protein 90-6, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103502120 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.5e-24
Identity = 66/81 (81.48%), Postives = 69/81 (85.19%), Query Frame = 0 

Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRLMDLIVNSLYSNKE FLRELISNASDALDKLRFLSVT PGLLKEAIDF I I +DKD
Sbjct: 103 VSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRFLSVTDPGLLKEAIDFDIRIQTDKD 162

Query: 105 NGIISIIDTGI-EEEEENRDC 125
           NGI+SI DTGI    +E  DC
Sbjct: 163 NGILSITDTGIGMTRQELVDC 183


HSP 2 Score: 68.2 bits (165), Expect = 2.0e-08
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 0 

Query: 101 SDKDNGIISIIDTGIEEEEENRDCCVELRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFT 160
           ++K     ++++   + E  N    + LRNPKEVSTE+YNEFY+KT NEYLDPLASSHFT
Sbjct: 333 TEKKKKTKTVVEKYWDWELTNETQPIWLRNPKEVSTEDYNEFYKKTFNEYLDPLASSHFT 392

Query: 161 TE 163
           TE
Sbjct: 393 TE 394

[Close]
BLAST of Carg16098 vs. TrEMBL
Match: tr|A0A0B2SPS6|A0A0B2SPS6_GLYSO (Heat shock protein 90 OS=Glycine soja OX=3848 GN=glysoja_031225 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.5e-24
Identity = 66/81 (81.48%), Postives = 69/81 (85.19%), Query Frame = 0 

Query: 45  VSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGPGLLKEAIDFHICIHSDKD 104
           VSRLMDLIVNSLYSNKE FLRELISNASDALDKLRFLSVT PGLLKEA+DF I I +DKD
Sbjct: 103 VSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRFLSVTEPGLLKEAVDFDIRIQADKD 162

Query: 105 NGIISIIDTGI-EEEEENRDC 125
           NGIISI DTGI    +E  DC
Sbjct: 163 NGIISITDTGIGMTRQELVDC 183


HSP 2 Score: 65.5 bits (158), Expect = 1.3e-07
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 0 

Query: 128 LRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE 163
           LRNPKEV+ EEYNEFY+KT NEYL+PLASSHFTTE
Sbjct: 356 LRNPKEVTKEEYNEFYKKTFNEYLEPLASSHFTTE 390

[Close]
BLAST of Carg16098 vs. TrEMBL
Match: tr|A0A1S3UEP8|A0A1S3UEP8_VIGRR (heat shock protein 90-6, mitochondrial OS=Vigna radiata var. radiata OX=3916 GN=LOC106764678 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 9.8e-24
Identity = 66/89 (74.16%), Postives = 72/89 (80.90%), Query Frame = 0 

Query: 27  NAASALAPATHASVLTNTVSRLMDLIVNSLYSNKEAFLRELISNASDALDKLRFLSVTGP 86
           ++AS+  PA         VSRLMDLIVNSLYSNKE FLRELISNASDALDKLRFLSVT P
Sbjct: 85  SSASSSTPAERYEYQAE-VSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRFLSVTEP 144

Query: 87  GLLKEAIDFHICIHSDKDNGIISIIDTGI 116
           GLLK+A+DF I I +DKDNGIISI DTGI
Sbjct: 145 GLLKDAVDFDIRIQTDKDNGIISITDTGI 172


HSP 2 Score: 64.3 bits (155), Expect = 2.9e-07
Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 0 

Query: 109 SIIDTGIEEEEENRDCCVELRNPKEVSTEEYNEFYRKTSNEYLDPLASSHFTTE 163
           ++++   + E  N    + LRNPKEV+ EEYNEFY+KT NEYL+PLASSHFTTE
Sbjct: 347 TVVEKYWDWELTNETQPIWLRNPKEVTKEEYNEFYKKTFNEYLEPLASSHFTTE 400

The following BLAST results are available for this feature:
BLAST of Carg16098 vs. NCBI nr
Match NameE-valueIdentityDescription
KJB10747.12.4e-2642.25hypothetical protein B456_001G220600 [Gossypium raimondii][more]
XP_008464175.11.1e-2381.48PREDICTED: heat shock protein 90-6, mitochondrial [Cucumis melo][more]
KHN46925.11.1e-2381.48Heat shock protein 90 [Glycine soja][more]
XP_003545075.31.1e-2381.48heat shock protein 90-6, mitochondrial [Glycine max] >KRH14117.1 hypothetical pr... [more]
XP_014504491.11.5e-2374.16heat shock protein 90-6, mitochondrial [Vigna radiata var. radiata][more]
BLAST of Carg16098 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G07770.11.2e-2270.37HEAT SHOCK PROTEIN 89.1[more]
AT4G24190.15.3e-1558.23Chaperone protein htpG family protein[more]
AT2G04030.16.9e-1574.55Chaperone protein htpG family protein[more]
AT5G52640.17.6e-1453.52heat shock protein 90.1[more]
AT5G56000.17.6e-1453.52HEAT SHOCK PROTEIN 81.4[more]
BLAST of Carg16098 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|F4JFN3|HS906_ARATH2.1e-2170.37Heat shock protein 90-6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HSP90-... [more]
sp|Q22235|ENPL1_CAEEL7.7e-1657.75Endoplasmin homolog OS=Caenorhabditis elegans OX=6239 GN=enpl-1 PE=3 SV=1[more]
sp|P41887|HSP90_SCHPO2.9e-1560.56Heat shock protein 90 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
sp|P36183|ENPL_HORVU1.9e-1456.96Endoplasmin homolog OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
sp|Q9BLC5|HSP83_BOMMO2.5e-1454.93Heat shock protein 83 OS=Bombyx mori OX=7091 GN=Hsp83 PE=1 SV=1[more]
BLAST of Carg16098 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0D2M1M3|A0A0D2M1M3_GOSRA1.6e-2642.25Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G220600 PE=3 ... [more]
tr|A0A0R0GHB3|A0A0R0GHB3_SOYBN7.5e-2481.48Uncharacterized protein OS=Glycine max OX=3847 GN=100806710 PE=3 SV=1[more]
tr|A0A1S3CKV8|A0A1S3CKV8_CUCME7.5e-2481.48heat shock protein 90-6, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103502120 P... [more]
tr|A0A0B2SPS6|A0A0B2SPS6_GLYSO7.5e-2481.48Heat shock protein 90 OS=Glycine soja OX=3848 GN=glysoja_031225 PE=3 SV=1[more]
tr|A0A1S3UEP8|A0A1S3UEP8_VIGRR9.8e-2474.16heat shock protein 90-6, mitochondrial OS=Vigna radiata var. radiata OX=3916 GN=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0051082unfolded protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006457protein folding
Vocabulary: INTERPRO
TermDefinition
IPR019805Heat_shock_protein_90_CS
IPR001404Hsp90_fam
IPR036890HATPase_C_sf
IPR020575Hsp90_N
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0006950 response to stress
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0051082 unfolded protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16098-RACarg16098-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020575Heat shock protein Hsp90, N-terminalPRINTSPR00775HEATSHOCK90coord: 37..57
score: 31.65
coord: 58..80
score: 84.41
coord: 107..124
score: 26.32
IPR036890Histidine kinase/HSP90-like ATPase superfamilyGENE3DG3DSA:3.30.565.10coord: 44..115
e-value: 4.7E-25
score: 90.3
IPR036890Histidine kinase/HSP90-like ATPase superfamilySUPERFAMILYSSF55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 44..115
IPR001404Heat shock protein Hsp90 familyPFAMPF00183HSP90coord: 114..162
e-value: 1.6E-8
score: 33.8
IPR001404Heat shock protein Hsp90 familyPANTHERPTHR11528HEAT SHOCK PROTEIN 90coord: 41..116
coord: 121..162
NoneNo IPR availablePANTHERPTHR11528:SF41HEAT SHOCK PROTEIN 90-6, MITOCHONDRIALcoord: 41..116
coord: 121..162
IPR019805Heat shock protein Hsp90, conserved sitePROSITEPS00298HSP90coord: 57..66

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg16098CmaCh20G006760Cucurbita maxima (Rimu)carcmaB0486
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg16098Silver-seed gourdcarcarB232
Carg16098Silver-seed gourdcarcarB372
Carg16098Silver-seed gourdcarcarB378
Carg16098Cucumber (Gy14) v2carcgybB0357
Carg16098Cucumber (Gy14) v2carcgybB0361
Carg16098Cucumber (Gy14) v1carcgyB0404
Carg16098Cucumber (Gy14) v1carcgyB0405
Carg16098Cucumber (Gy14) v1carcgyB0408
Carg16098Cucurbita maxima (Rimu)carcmaB0483
Carg16098Cucurbita maxima (Rimu)carcmaB0484
Carg16098Cucurbita maxima (Rimu)carcmaB0487
Carg16098Cucurbita moschata (Rifu)carcmoB0470
Carg16098Cucurbita moschata (Rifu)carcmoB0471
Carg16098Cucurbita moschata (Rifu)carcmoB0473
Carg16098Cucurbita moschata (Rifu)carcmoB0474
Carg16098Cucurbita pepo (Zucchini)carcpeB0484
Carg16098Cucurbita pepo (Zucchini)carcpeB0485
Carg16098Cucurbita pepo (Zucchini)carcpeB0487
Carg16098Cucurbita pepo (Zucchini)carcpeB0489
Carg16098Wild cucumber (PI 183967)carcpiB0381
Carg16098Wild cucumber (PI 183967)carcpiB0387
Carg16098Cucumber (Chinese Long) v2carcuB0378
Carg16098Cucumber (Chinese Long) v2carcuB0384
Carg16098Cucumber (Chinese Long) v3carcucB0382
Carg16098Cucumber (Chinese Long) v3carcucB0386
Carg16098Bottle gourd (USVL1VR-Ls)carlsiB315
Carg16098Bottle gourd (USVL1VR-Ls)carlsiB316
Carg16098Melon (DHL92) v3.5.1carmeB0350
Carg16098Melon (DHL92) v3.6.1carmedB0356
Carg16098Watermelon (Charleston Gray)carwcgB0334
Carg16098Watermelon (Charleston Gray)carwcgB0336
Carg16098Watermelon (Charleston Gray)carwcgB0340
Carg16098Watermelon (97103) v1carwmB0331
Carg16098Watermelon (97103) v1carwmB0334
Carg16098Watermelon (97103) v1carwmB0339
Carg16098Watermelon (97103) v2carwmbB0357
Carg16098Watermelon (97103) v2carwmbB0358
Carg16098Watermelon (97103) v2carwmbB0363
Carg16098Wax gourdcarwgoB0428
Carg16098Wax gourdcarwgoB0429
Carg16098Wax gourdcarwgoB0433