Carg16079 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16079
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Glutaredoxin family protein
Location	Cucurbita_argyrosperma_scaffold_090 : 529889 .. 531526 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTTTTTTCTCTCTCTCTCTTTTGGCGGGCCGTTTAGGCCCAATAGGTCTGGATATATAAGCTTAGCAGTCGAAGGATTGTGTGTAATTTTGGACGATGATGCGCGGATTTCAGTTGACTCTGGCTCTGGTGGTGATCACCCTCTCTGCCCTTCGGCCAAGAGATGGCCTTATTGGAGCCGACGCTTCGACTTCCACTTCCGCCTTCGTTCAGAATGTCATCTTCTCTAACAGGATTGCCATGTTCTCCAAATCCTACTGCCCGTATGTTCTCGTCTTCTTTTTCTTTTCTAATTAGATGAACGCACGCTTTCTGTTTTTCTTTTTCTATTTATTTTTCCTGCGTATTTCGATGGCTCAATTCGTGATATTTAGGCTTAGGAATGATTGAGTTATTGGTCCCAGTCAATCTGTAATTTCTATTAGTAGCGATTCTCGTATATTTGAGAAATAAATGTAGGATATACGAGTGCGGGATTCGGATGTTTTTGGTCAAATTTGGAGTGAATAGGAAGCTTATATTTCCCTTGTAGAGATGGGACCAAGCCAAGATAGTTTTCTCCAAGGACAGAAAGCTTGTTTGATTGCTACTGTGGCTTCTTTTTTCTTGGTGGTTTCTAGCAGATCTGTCGTCCTTGAATTATTAGAATTACGCGGTTGTCGGCGGTGGATTGAACTATTTTTATTTTGCTTAGTTCTTAGGTATGTGGAGAGAGAACTGCTTAGATGTCCAACCGTAAATATTGATCACAAGATGAATTCATTTTCTATCTAGATTGCCATTCACATGTGCGATCTTTTCAATTGGATTTCTGGAATCAGTATTACGATTGGATTCTTTACACCGTTTAGTCCCCCTGATTTTATGCTATTCCTTCTTTCTTGAAGTGAGGCTTATAGAGGTTGCGCCATGTTAGCTATTTCTTATTTACGTACTGTTCCAACTTCCAAGTGAAGTAGGTTTCTGTAACTTCTTTTGAGATTGGGTTGGGGTTTTCCTCTCTCTCTCTCTCTCCAGCAATTTCATTGATCAATGAAATTTGCTTTTTGCTTCTTCTAAAAAAGAAAAAAGAATCATCCTATACGAATAGTGAAGACCTACAAAATTATGGCACTTCAAATGGTTTCTTAAAAATAATTTAATAACAATAATTAAGCGATTCATATTCTATCTTTGTCTTATTCTACTGGTAGATATTGCATGGGTGCCAAACGCATCTTCAGTGAACTTCACGAAAAACCTTTTGTTGTGGAGCTTGATCTTCGAGGTATTTATTCGGTGTTAATTTTGTTGATCATTTGCAAATTCAATAACTGTTTGAAGAATCATATTCATGACCACATAATGAGTATCTACATTCACATGTAGATGATGGACCTCAAATTCAGAGTGTCCTGCTAGACCTGACAGGCAGGCGCACTGTTCCTCAAATTTTTGTGAATGGCAAGCACATTGGTGGCGCTGATGGTGAGTTCTCTCGGCTTCTTAATTATTTGAAAGTTCTCTACGTCTTATTCAGTGACATAGAGTAAATTTCTCATTTCCATCACCACTTGGTTTGATTTCCATATATTTTTCAGATCTTAAAGCCGCTGTTGCTAGTGGTCAGTTGCAGAAACTTCTTGCATCAAGTTGA

mRNA sequence

TCTTTTTTTTCTCTCTCTCTCTTTTGGCGGGCCGTTTAGGCCCAATAGGTCTGGATATATAAGCTTAGCAGTCGAAGGATTGTGTGTAATTTTGGACGATGATGCGCGGATTTCAGTTGACTCTGGCTCTGGTGGTGATCACCCTCTCTGCCCTTCGGCCAAGAGATGGCCTTATTGGAGCCGACGCTTCGACTTCCACTTCCGCCTTCGTTCAGAATGTCATCTTCTCTAACAGGATTGCCATGTTCTCCAAATCCTACTGCCCATATTGCATGGGTGCCAAACGCATCTTCAGTGAACTTCACGAAAAACCTTTTGTTGTGGAGCTTGATCTTCGAGATGATGGACCTCAAATTCAGAGTGTCCTGCTAGACCTGACAGGCAGGCGCACTGTTCCTCAAATTTTTGTGAATGGCAAGCACATTGGTGGCGCTGATGATCTTAAAGCCGCTGTTGCTAGTGGTCAGTTGCAGAAACTTCTTGCATCAAGTTGA

Coding sequence (CDS)

ATGATGCGCGGATTTCAGTTGACTCTGGCTCTGGTGGTGATCACCCTCTCTGCCCTTCGGCCAAGAGATGGCCTTATTGGAGCCGACGCTTCGACTTCCACTTCCGCCTTCGTTCAGAATGTCATCTTCTCTAACAGGATTGCCATGTTCTCCAAATCCTACTGCCCATATTGCATGGGTGCCAAACGCATCTTCAGTGAACTTCACGAAAAACCTTTTGTTGTGGAGCTTGATCTTCGAGATGATGGACCTCAAATTCAGAGTGTCCTGCTAGACCTGACAGGCAGGCGCACTGTTCCTCAAATTTTTGTGAATGGCAAGCACATTGGTGGCGCTGATGATCTTAAAGCCGCTGTTGCTAGTGGTCAGTTGCAGAAACTTCTTGCATCAAGTTGA

Protein sequence

MMRGFQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKLLASS

Homology

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BLAST of Carg16079 vs. NCBI nr
Match: XP_022963026.1 (glutaredoxin-C3 [Cucurbita moschata] >XP_022963027.1 glutaredoxin-C3 [Cucurbita moschata])

HSP 1 Score: 255.4 bits (651), Expect = 1.1e-64
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MMRGFQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMG 60
           MMRGFQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMG
Sbjct: 1   MMRGFQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMG 60

Query: 61  AKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVA 120
           AKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVA
Sbjct: 61  AKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVA 120

Query: 121 SGQLQKLLASS 132
           SGQLQKLLASS
Sbjct: 121 SGQLQKLLASS 131

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BLAST of Carg16079 vs. NCBI nr
Match: XP_023518077.1 (glutaredoxin-C3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253.4 bits (646), Expect = 4.1e-64
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MMRGFQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMG 60
           MMRGFQLTLALVVITLSALRPRDGL GADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMG
Sbjct: 1   MMRGFQLTLALVVITLSALRPRDGLTGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMG 60

Query: 61  AKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVA 120
           AKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVA
Sbjct: 61  AKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVA 120

Query: 121 SGQLQKLLASS 132
           SGQLQKLLASS
Sbjct: 121 SGQLQKLLASS 131

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BLAST of Carg16079 vs. NCBI nr
Match: XP_023003943.1 (glutaredoxin-C3-like [Cucurbita maxima])

HSP 1 Score: 249.6 bits (636), Expect = 5.9e-63
Identity = 128/131 (97.71%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MMRGFQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMG 60
           MMR FQLTLALVVITLSAL PRDGLIGA+ASTSTSAFVQNVIFSNRIAMFSKSYCPYCMG
Sbjct: 1   MMRAFQLTLALVVITLSALHPRDGLIGAEASTSTSAFVQNVIFSNRIAMFSKSYCPYCMG 60

Query: 61  AKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVA 120
           AKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVA
Sbjct: 61  AKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVA 120

Query: 121 SGQLQKLLASS 132
           SGQLQKLLASS
Sbjct: 121 SGQLQKLLASS 131

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BLAST of Carg16079 vs. NCBI nr
Match: XP_008440783.1 (PREDICTED: glutaredoxin-C3 [Cucumis melo])

HSP 1 Score: 229.2 bits (583), Expect = 8.2e-57
Identity = 117/133 (87.97%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 1   MMRG--FQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYC 60
           MMRG  FQLTL + VITL+AL PRDGL GA+A+TSTSAFV NVI+SNRIAMFSKSYCPYC
Sbjct: 2   MMRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYC 61

Query: 61  MGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAA 120
           +GAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTG+RTVPQIFVNGKHIGG+DDLKAA
Sbjct: 62  LGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 121

Query: 121 VASGQLQKLLASS 132
           VASGQLQKLLAS+
Sbjct: 122 VASGQLQKLLAST 134

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BLAST of Carg16079 vs. NCBI nr
Match: XP_004149976.1 (PREDICTED: glutaredoxin-C3 [Cucumis sativus])

HSP 1 Score: 226.5 bits (576), Expect = 5.3e-56
Identity = 116/133 (87.22%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MMRG--FQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYC 60
           MMRG  FQLTL L VITL+AL PRD L GA+A+TSTSAFVQNVI+SNRIAMFSKSYCPYC
Sbjct: 9   MMRGFHFQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYC 68

Query: 61  MGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAA 120
           +GAKRIFSELHEKPFVVELDLRDDG QIQSVLLDLTG+RTVPQIFVNGKHIGG+DDLKAA
Sbjct: 69  LGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 128

Query: 121 VASGQLQKLLASS 132
           VA+GQLQKLLAS+
Sbjct: 129 VANGQLQKLLAST 141

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BLAST of Carg16079 vs. TAIR10
Match: AT1G77370.1 (Glutaredoxin family protein)

HSP 1 Score: 154.8 bits (390), Expect = 3.6e-38
Identity = 75/104 (72.12%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 28  ADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQ 87
           A A+ S SAFVQN I SN+I +FSKSYCPYC+ +KRIFS+L E+PFVVELD R+DG QIQ
Sbjct: 27  AGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQLKEEPFVVELDQREDGDQIQ 86

Query: 88  SVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKLLASS 132
             LL+  GRRTVPQ+FVNGKHIGG+DDL AA+ SGQLQKLLA+S
Sbjct: 87  YELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESGQLQKLLAAS 130

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BLAST of Carg16079 vs. TAIR10
Match: AT5G20500.1 (Glutaredoxin family protein)

HSP 1 Score: 122.5 bits (306), Expect = 2.0e-28
Identity = 61/120 (50.83%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 12  VVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEK 71
           +V+ L AL     ++ + AS+  + FV+  I S++I +FSKSYCPYC  AK +F EL + 
Sbjct: 9   MVMLLVALVTFISMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQV 68

Query: 72  PFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKLLASS 131
           P+VVELD R+DG  IQ+ L ++ GRRTVPQ+F+NGKH+GG+DD   A  SG+L KLL  S
Sbjct: 69  PYVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGELAKLLGVS 128

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BLAST of Carg16079 vs. TAIR10
Match: AT4G28730.1 (Glutaredoxin family protein)

HSP 1 Score: 84.7 bits (208), Expect = 4.5e-17
Identity = 41/95 (43.16%), Postives = 57/95 (60.00%), Query Frame = 0


Query: 38  VQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELD-LRDDGPQIQSVLLDLTGR 97
           ++  +  N + ++SK++C YC   K +F  L  +P VVELD L   GPQ+Q VL  LTG+
Sbjct: 73  IRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQ 132

Query: 98  RTVPQIFVNGKHIGGADDLKAAVASGQLQKLLASS 132
            TVP +FV GKHIGG  D       G L+ +LA +
Sbjct: 133 HTVPNVFVCGKHIGGCTDTVKLNRKGDLELMLAEA 167

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BLAST of Carg16079 vs. TAIR10
Match: AT5G40370.2 (Glutaredoxin family protein)

HSP 1 Score: 80.9 bits (198), Expect = 6.5e-16
Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 0


Query: 38  VQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRR 97
           + + +  N   + SK+YCPYC+  K +  +L  K   VELD   DG QIQS L + TG+R
Sbjct: 31  ILSYLIGNFSGICSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQR 90

Query: 98  TVPQIFVNGKHIGGADDLKAAVASGQLQKLLASS 132
           TVP +F+ G HIGG D        G+L  LL  +
Sbjct: 91  TVPNVFIGGNHIGGCDATSNLHKDGKLVPLLTEA 124

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BLAST of Carg16079 vs. TAIR10
Match: AT5G63030.1 (Thioredoxin superfamily protein)

HSP 1 Score: 76.3 bits (186), Expect = 1.6e-14
Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 0


Query: 39  QNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRT 98
           + ++ +  + +FSK+YC YC   K++ ++L     V+ELD   DG +IQS L + TG+ T
Sbjct: 23  KEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMSDGGEIQSALSEWTGQTT 82

Query: 99  VPQIFVNGKHIGGADDLKAAVASGQLQKLLASS 132
           VP +F+ G HIGG D +      G+L  LL  +
Sbjct: 83  VPNVFIKGNHIGGCDRVMETNKQGKLVPLLTEA 115

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BLAST of Carg16079 vs. Swiss-Prot
Match: sp|Q9FVX1|GRXC3_ARATH (Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 6.4e-37
Identity = 75/104 (72.12%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 28  ADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQ 87
           A A+ S SAFVQN I SN+I +FSKSYCPYC+ +KRIFS+L E+PFVVELD R+DG QIQ
Sbjct: 27  AGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQLKEEPFVVELDQREDGDQIQ 86

Query: 88  SVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKLLASS 132
             LL+  GRRTVPQ+FVNGKHIGG+DDL AA+ SGQLQKLLA+S
Sbjct: 87  YELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESGQLQKLLAAS 130

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BLAST of Carg16079 vs. Swiss-Prot
Match: sp|Q6H628|GRXS6_ORYSJ (Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.8e-34
Identity = 70/104 (67.31%), Postives = 86/104 (82.69%), Query Frame = 0


Query: 28  ADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQ 87
           A A+ S SAFVQN I+SNRI +FSK+YCPY M AKRIF +L E P++VELDLR+DG +IQ
Sbjct: 24  AAATRSPSAFVQNAIYSNRITIFSKTYCPYSMRAKRIFRDLKENPYIVELDLREDGREIQ 83

Query: 88  SVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKLLASS 132
           SVLLDL GR TVPQ+FVNG+H+GG+DD   A ++GQLQKLL +S
Sbjct: 84  SVLLDLVGRHTVPQVFVNGQHVGGSDDTANAHSNGQLQKLLGNS 127

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BLAST of Carg16079 vs. Swiss-Prot
Match: sp|Q8LFQ6|GRXC4_ARATH (Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 3.5e-27
Identity = 61/120 (50.83%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 12  VVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEK 71
           +V+ L AL     ++ + AS+  + FV+  I S++I +FSKSYCPYC  AK +F EL + 
Sbjct: 9   MVMLLVALVTFISMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQV 68

Query: 72  PFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKLLASS 131
           P+VVELD R+DG  IQ+ L ++ GRRTVPQ+F+NGKH+GG+DD   A  SG+L KLL  S
Sbjct: 69  PYVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGELAKLLGVS 128

[Close]

BLAST of Carg16079 vs. Swiss-Prot
Match: sp|Q0DAE4|GRXC8_ORYSJ (Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2)

HSP 1 Score: 114.0 bits (284), Expect = 1.3e-24
Identity = 53/96 (55.21%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 35  SAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELH--EKPFVVELDLRDDGPQIQSVLLD 94
           S+FV++ + ++ + +FSKSYCPYC  AK +F EL   ++P+VVELD R+DG +IQ  L D
Sbjct: 33  SSFVKSTVKAHDVVIFSKSYCPYCRRAKAVFKELELKKEPYVVELDQREDGWEIQDALSD 92

Query: 95  LTGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKLL 129
           + GRRTVPQ+FV+GKH+GG+DD   A  SG+L KLL
Sbjct: 93  MVGRRTVPQVFVHGKHLGGSDDTVEAYESGKLAKLL 128

[Close]

BLAST of Carg16079 vs. Swiss-Prot
Match: sp|P55143|GLRX_RICCO (Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.1e-19
Identity = 43/93 (46.24%), Postives = 60/93 (64.52%), Query Frame = 0


Query: 39  QNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRT 98
           + ++ SN + +FSK+YCPYC   K++  +L  K  VVELD   DG +IQ+ L + TG+RT
Sbjct: 7   KELVSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELDTESDGSEIQTALAEWTGQRT 66

Query: 99  VPQIFVNGKHIGGADDLKAAVASGQLQKLLASS 132
           VP +F+ GKHIGG D   A  + GQL  LL  +
Sbjct: 67  VPNVFIGGKHIGGCDSTTAKHSQGQLVPLLTEA 99

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BLAST of Carg16079 vs. TrEMBL
Match: tr|A0A1S3B2P3|A0A1S3B2P3_CUCME (glutaredoxin-C3 OS=Cucumis melo OX=3656 GN=LOC103485100 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 5.4e-57
Identity = 117/133 (87.97%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 1   MMRG--FQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYC 60
           MMRG  FQLTL + VITL+AL PRDGL GA+A+TSTSAFV NVI+SNRIAMFSKSYCPYC
Sbjct: 2   MMRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYC 61

Query: 61  MGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAA 120
           +GAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTG+RTVPQIFVNGKHIGG+DDLKAA
Sbjct: 62  LGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 121

Query: 121 VASGQLQKLLASS 132
           VASGQLQKLLAS+
Sbjct: 122 VASGQLQKLLAST 134

[Close]

BLAST of Carg16079 vs. TrEMBL
Match: tr|A0A0A0KKK8|A0A0A0KKK8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504670 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.3e-55
Identity = 112/127 (88.19%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 5   FQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRI 64
           FQLTL L VITL+AL PRD L GA+A+TSTSAFVQNVI+SNRIAMFSKSYCPYC+GAKRI
Sbjct: 106 FQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRI 165

Query: 65  FSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQL 124
           FSELHEKPFVVELDLRDDG QIQSVLLDLTG+RTVPQIFVNGKHIGG+DDLKAAVA+GQL
Sbjct: 166 FSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVANGQL 225

Query: 125 QKLLASS 132
           QKLLAS+
Sbjct: 226 QKLLAST 232

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BLAST of Carg16079 vs. TrEMBL
Match: tr|A0A251NCG7|A0A251NCG7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G163800 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 7.6e-43
Identity = 95/131 (72.52%), Postives = 109/131 (83.21%), Query Frame = 0


Query: 2   MRGFQLT-LALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMG 61
           MR F+L   A +    +AL     ++ A+ASTS SAFVQNVI+SN+IA+FSKSYCPYC+ 
Sbjct: 155 MRRFELLGCAAIAAVAAALVLLGNVVVAEASTSPSAFVQNVIYSNKIAIFSKSYCPYCLR 214

Query: 62  AKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVA 121
           AKRIFSELHE+PFVVELDLRDDG QIQSVLLD+ GR TVPQIFVNGKHIGG+DDLKAAV 
Sbjct: 215 AKRIFSELHEQPFVVELDLRDDGAQIQSVLLDIVGRTTVPQIFVNGKHIGGSDDLKAAVL 274

Query: 122 SGQLQKLLASS 132
           SGQLQKLL+ S
Sbjct: 275 SGQLQKLLSIS 285

[Close]

BLAST of Carg16079 vs. TrEMBL
Match: tr|A0A2P6RM46|A0A2P6RM46_ROSCH (Putative thioredoxin-disulfide reductase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0100301 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.4e-41
Identity = 89/120 (74.17%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 12  VVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEK 71
           V++T++A+    G    +AS+S SAFVQNVI+SN+IA+FSKSYCPYC+ AKRIFSELHE+
Sbjct: 18  VIVTVAAVLLLLGNDVVEASSSPSAFVQNVIYSNKIAIFSKSYCPYCLRAKRIFSELHEQ 77

Query: 72  PFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKLLASS 131
           P+VVELDLRDDG QIQSVLLD+ GR TVPQ+FVNGKHIGG+DDLKAAVASGQLQKLL+ S
Sbjct: 78  PYVVELDLRDDGGQIQSVLLDVVGRSTVPQVFVNGKHIGGSDDLKAAVASGQLQKLLSIS 137

[Close]

BLAST of Carg16079 vs. TrEMBL
Match: tr|C6T1G2|C6T1G2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100500348 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 7.9e-40
Identity = 86/121 (71.07%), Postives = 101/121 (83.47%), Query Frame = 0


Query: 11  LVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHE 70
           +V +T + L    G +   AS S SAFVQN I+SNRIA+FSKSYCPYC+ AKR+ +EL+E
Sbjct: 9   VVTVTFAVLLFWIGSLQVQASNSVSAFVQNAIYSNRIAVFSKSYCPYCLRAKRLLAELNE 68

Query: 71  KPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKLLAS 130
           KPFVVELDLRDDG QIQSVLLDL GRRTVPQ+FVNGKHIGG+DDL AAV SG+LQKLL++
Sbjct: 69  KPFVVELDLRDDGYQIQSVLLDLIGRRTVPQVFVNGKHIGGSDDLSAAVQSGELQKLLSA 128

Query: 131 S 132
           S
Sbjct: 129 S 129

The following BLAST results are available for this feature:

BLAST of Carg16079 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963026.1	1.1e-64	100.00	glutaredoxin-C3 [Cucurbita moschata] >XP_022963027.1 glutaredoxin-C3 [Cucurbita ...	[more]
XP_023518077.1	4.1e-64	99.24	glutaredoxin-C3 [Cucurbita pepo subsp. pepo]	[more]
XP_023003943.1	5.9e-63	97.71	glutaredoxin-C3-like [Cucurbita maxima]	[more]
XP_008440783.1	8.2e-57	87.97	PREDICTED: glutaredoxin-C3 [Cucumis melo]	[more]
XP_004149976.1	5.3e-56	87.22	PREDICTED: glutaredoxin-C3 [Cucumis sativus]	[more]

BLAST of Carg16079 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G77370.1	3.6e-38	72.12	Glutaredoxin family protein	[more]
AT5G20500.1	2.0e-28	50.83	Glutaredoxin family protein	[more]
AT4G28730.1	4.5e-17	43.16	Glutaredoxin family protein	[more]
AT5G40370.2	6.5e-16	41.49	Glutaredoxin family protein	[more]
AT5G63030.1	1.6e-14	37.63	Thioredoxin superfamily protein	[more]

BLAST of Carg16079 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FVX1\|GRXC3_ARATH	6.4e-37	72.12	Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1	[more]
sp\|Q6H628\|GRXS6_ORYSJ	1.8e-34	67.31	Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2...	[more]
sp\|Q8LFQ6\|GRXC4_ARATH	3.5e-27	50.83	Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2	[more]
sp\|Q0DAE4\|GRXC8_ORYSJ	1.3e-24	55.21	Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2	[more]
sp\|P55143\|GLRX_RICCO	2.1e-19	46.24	Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1	[more]

BLAST of Carg16079 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B2P3\|A0A1S3B2P3_CUCME	5.4e-57	87.97	glutaredoxin-C3 OS=Cucumis melo OX=3656 GN=LOC103485100 PE=4 SV=1	[more]
tr\|A0A0A0KKK8\|A0A0A0KKK8_CUCSA	2.3e-55	88.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504670 PE=4 SV=1	[more]
tr\|A0A251NCG7\|A0A251NCG7_PRUPE	7.6e-43	72.52	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G163800 PE=4 SV=1	[more]
tr\|A0A2P6RM46\|A0A2P6RM46_ROSCH	1.4e-41	74.17	Putative thioredoxin-disulfide reductase OS=Rosa chinensis OX=74649 GN=RchiOBHm_...	[more]
tr\|C6T1G2\|C6T1G2_SOYBN	7.9e-40	71.07	Uncharacterized protein OS=Glycine max OX=3847 GN=100500348 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR011767	GLR_AS
IPR011899	Glutaredoxin_euk/vir
IPR002109	Glutaredoxin
IPR014025	Glutaredoxin_subgr

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16079-RA	Carg16079-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 106..119 score: 47.02 coord: 92..105 score: 54.17 coord: 47..65 score: 40.57
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 47..109 e-value: 2.5E-16 score: 59.6
IPR002109	Glutaredoxin	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 35..131 score: 22.704
IPR011899	Glutaredoxin, eukaryotic/virial	TIGRFAM	TIGR02180	TIGR02180	coord: 47..128 e-value: 2.6E-28 score: 96.1
None	No IPR available	GENE3D	G3DSA:3.40.30.10		coord: 28..131 e-value: 3.6E-35 score: 122.0
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 23..130
None	No IPR available	PANTHER	PTHR10168:SF116	GLUTAREDOXIN-C3	coord: 23..130
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 46..127 e-value: 4.60986E-43 score: 137.671
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 49..64
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 36..129

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg16079	Cla014260	Watermelon (97103) v1	carwmB0756
Carg16079	Csa6G504670	Cucumber (Chinese Long) v2	carcuB0776
Carg16079	MELO3C007879	Melon (DHL92) v3.5.1	carmeB0751
Carg16079	ClCG01G020060	Watermelon (Charleston Gray)	carwcgB0732
Carg16079	CSPI06G31500	Wild cucumber (PI 183967)	carcpiB0794
Carg16079	Cucsa.043320	Cucumber (Gy14) v1	carcgyB0850
Carg16079	CmaCh07G004500	Cucurbita maxima (Rimu)	carcmaB1056
Carg16079	CmoCh07G004470	Cucurbita moschata (Rifu)	carcmoB1029
Carg16079	Lsi01G006290	Bottle gourd (USVL1VR-Ls)	carlsiB693
Carg16079	Cp4.1LG19g09060	Cucurbita pepo (Zucchini)	carcpeB1065
Carg16079	MELO3C007879.2	Melon (DHL92) v3.6.1	carmedB0766
Carg16079	CsaV3_6G046820	Cucumber (Chinese Long) v3	carcucB0797

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg16079	Silver-seed gourd	carcarB426
Carg16079	Silver-seed gourd	carcarB604
Carg16079	Cucumber (Gy14) v2	carcgybB0751
Carg16079	Cucumber (Gy14) v2	carcgybB0753
Carg16079	Cucurbita maxima (Rimu)	carcmaB1055
Carg16079	Cucurbita moschata (Rifu)	carcmoB1028
Carg16079	Cucurbita pepo (Zucchini)	carcpeB1064
Carg16079	Cucurbita pepo (Zucchini)	carcpeB1069
Carg16079	Wild cucumber (PI 183967)	carcpiB0792
Carg16079	Cucumber (Chinese Long) v2	carcuB0774
Carg16079	Cucumber (Chinese Long) v3	carcucB0795
Carg16079	Bottle gourd (USVL1VR-Ls)	carlsiB696
Carg16079	Melon (DHL92) v3.6.1	carmedB0764
Carg16079	Watermelon (97103) v2	carwmbB0791
Carg16079	Watermelon (97103) v2	carwmbB0793
Carg16079	Wax gourd	carwgoB0891