Carg15901 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15901
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Heat shock 22 kDa protein
Location	Cucurbita_argyrosperma_scaffold_080 : 437174 .. 438572 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGACCAGCCGGAATATCTCTCCTCTTCAATCGCTTCCGGGTTTAAACCCTAACAAACTGCGGCGGTTGCCCCATCTTTTCAGCCGGGTTTTGGAGCTTCCCTTTTTTAAGTCCGATGCCGATATTTTCATTTCCGAAACCTCTGATTGCTTCCGATTCGTAGCGGAAACTGATGGACTCCGCCGCGAGTTTAGGGCGCACACGGTTCATATCCATCCCGGAGTCCTCAAGGTTGTGATTACACAAATTGGGGCTCTGGAGTTGAAGTTAGATGAACTGGAAATCGATACGTGGAGATTTCGACTGCCGGAAACGGCTCTGCCGGAGCTTGTAACCGCCGCGTTCGCCGGCGGAAAGCTGATCGTGACGGTTCCGAAGACGGAAGACGCCGGAAAAGGTGCGTGGGGGGATAAGAAAGGGGATTGTTTAGTCAATCTTGCTCGCTCTGTTTCCATTTTTCATATATTGAAAGGAATTTAATGAAATTTGAGCTTTCTATTGAATCGTTCGGCACGCTTTGTTTAGAGACGTTTTCGGGTTTTCACACCCTCATAATCAATCTTTTGTTTCACTCTCACAATTTTTGTAACAACACGAACGAATTGCTAGCACATATTGTCAGCTTTGATTAGTTACATATAGCTCTCTAGACTCACGATTTTAAAATACGTCGATCAGGGGGAGGTTTTGAAGTTTCCACACTTTTATAAACAACTTTGTGTTATTCTCTCCAACCGATATGAGATTTCACAATTTTCGTAAACGCTAGTAGATATTGTCTACTTTAGTTCGTTATGTATCACCGTCAATCTTACGATTTTAAAACGCGTCTATTAAGAAAGAATTTCAGGTTTCCACATTCTTACAAGAAATTTTTCGTTCTTCTCTTCAATCGATGTGGGGTTTCACAACTTTTGTAACAGCCTAAGCTAACCGCTAGCAGATATTGTCCTCGCTACGTATCGTCGATCAAACAATTTTTGTAATAGTCCAAACCAACTGCGAGTATATATTATCCACTTTAGGCCGTTACATATCGTCGATATCACAATTTTTGTAACAGGGCAAACCAACTGCTAACAGGTATTGTCTACTTTAGCCCGTTACCTATCACCATCAGTCTCATGATTTTAATACCCTTACAAAGATAAAACTAGTCTATTAGAGAGAGATTTTCACACCTTATAAAAAATGTTTTGGTTATATTCTCCGATAGACATGCTTCATGATTTTAAAACACGTCTACACTCAACCGACGGCTGAGTTTGAACAAATCAAGATTAAATAGGGATGGTCTTTACCAATGAAACCTGTACCATAGAGTTACAGAATTCAACACGTGTCTGGTGACGTGTCATTTACAATTTCTTCCAAACGTCCGGCGACGACCGTTTAA

mRNA sequence

ATGTCGACCAGCCGGAATATCTCTCCTCTTCAATCGCTTCCGGGTTTAAACCCTAACAAACTGCGGCGGTTGCCCCATCTTTTCAGCCGGGTTTTGGAGCTTCCCTTTTTTAAGTCCGATGCCGATATTTTCATTTCCGAAACCTCTGATTGCTTCCGATTCGTAGCGGAAACTGATGGACTCCGCCGCGAGTTTAGGGCGCACACGGTTCATATCCATCCCGGAGTCCTCAAGGTTGTGATTACACAAATTGGGGCTCTGGAGTTGAAGTTAGATGAACTGGAAATCGATACGTGGAGATTTCGACTGCCGGAAACGGCTCTGCCGGAGCTTGTAACCGCCGCGTTCGCCGGCGGAAAGCTGATCGTGACGGTTCCGAAGACGGAAGACGCCGGAAAAGGTGCAATTCAACACGTGTCTGGTGACGTGTCATTTACAATTTCTTCCAAACGTCCGGCGACGACCGTTTAA

Coding sequence (CDS)

ATGTCGACCAGCCGGAATATCTCTCCTCTTCAATCGCTTCCGGGTTTAAACCCTAACAAACTGCGGCGGTTGCCCCATCTTTTCAGCCGGGTTTTGGAGCTTCCCTTTTTTAAGTCCGATGCCGATATTTTCATTTCCGAAACCTCTGATTGCTTCCGATTCGTAGCGGAAACTGATGGACTCCGCCGCGAGTTTAGGGCGCACACGGTTCATATCCATCCCGGAGTCCTCAAGGTTGTGATTACACAAATTGGGGCTCTGGAGTTGAAGTTAGATGAACTGGAAATCGATACGTGGAGATTTCGACTGCCGGAAACGGCTCTGCCGGAGCTTGTAACCGCCGCGTTCGCCGGCGGAAAGCTGATCGTGACGGTTCCGAAGACGGAAGACGCCGGAAAAGGTGCAATTCAACACGTGTCTGGTGACGTGTCATTTACAATTTCTTCCAAACGTCCGGCGACGACCGTTTAA

Protein sequence

MSTSRNISPLQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADIFISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWRFRLPETALPELVTAAFAGGKLIVTVPKTEDAGKGAIQHVSGDVSFTISSKRPATTV

Homology

[Close]

BLAST of Carg15901 vs. NCBI nr
Match: XP_022930297.1 (17.4 kDa class I heat shock protein-like [Cucurbita moschata])

HSP 1 Score: 265.8 bits (678), Expect = 9.4e-68
Identity = 135/142 (95.07%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 1   MSTSRNISPLQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADIFISETSDCFRFVAETDG 60
           MSTSRNISP QSLPGLNPNKLRRLPHLFSRVLELPFFKSDADI ISETSDCFRFVAETDG
Sbjct: 1   MSTSRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETDG 60

Query: 61  LRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWRFRLPETALPELVTAAFAGGK 120
           LRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWRFRLPETALPELVTAAFAGGK
Sbjct: 61  LRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWRFRLPETALPELVTAAFAGGK 120

Query: 121 LIVTVPKTEDAGKGAIQHVSGD 143
           LIVTVPKTEDAGKGA     GD
Sbjct: 121 LIVTVPKTEDAGKGAWGDKKGD 142

[Close]

BLAST of Carg15901 vs. NCBI nr
Match: XP_023514761.1 (17.4 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.7 bits (657), Expect = 2.6e-65
Identity = 131/135 (97.04%), Postives = 131/135 (97.04%), Query Frame = 0


Query: 1   MSTSRNISPLQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADIFISETSDCFRFVAETDG 60
           MS SRNISP QSLPGLNPNKLRRLPHLFSRVLELPFFKSDADI ISETSD FRFVAETDG
Sbjct: 1   MSNSRNISPPQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDRFRFVAETDG 60

Query: 61  LRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWRFRLPETALPELVTAAFAGGK 120
           LRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWRFRLPETALPELVTAAFAGGK
Sbjct: 61  LRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWRFRLPETALPELVTAAFAGGK 120

Query: 121 LIVTVPKTEDAGKGA 136
           LIVTVPKTEDAGKGA
Sbjct: 121 LIVTVPKTEDAGKGA 135

[Close]

BLAST of Carg15901 vs. NCBI nr
Match: XP_022999953.1 (17.4 kDa class I heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 245.7 bits (626), Expect = 1.0e-61
Identity = 126/148 (85.14%), Postives = 129/148 (87.16%), Query Frame = 0


Query: 1   MSTSRNISPLQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADIFISETSDCFRFVAETDG 60
           MS S N+SP +SLPGLNPNKLRRLPHLFSRVLELPFFKSDADI ISETSDCFRFVAET G
Sbjct: 1   MSNSGNMSPSRSLPGLNPNKLRRLPHLFSRVLELPFFKSDADISISETSDCFRFVAETGG 60

Query: 61  LRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWRFRLPETALPELVTAAFAGGK 120
           LRREFRAHTVHIHPGVLKVVITQIGALELKLDE E DTWRFRLPETALPELVTA FAGGK
Sbjct: 61  LRREFRAHTVHIHPGVLKVVITQIGALELKLDEPETDTWRFRLPETALPELVTAQFAGGK 120

Query: 121 LIVTVPKTEDAGKGAIQHVSGDVSFTIS 149
           LIVTVPKTEDA KG      GD    +S
Sbjct: 121 LIVTVPKTEDAEKGTWGDKKGDCLVNLS 148

[Close]

BLAST of Carg15901 vs. NCBI nr
Match: XP_008447155.1 (PREDICTED: uncharacterized protein LOC103489672 [Cucumis melo])

HSP 1 Score: 195.3 bits (495), Expect = 1.6e-46
Identity = 101/135 (74.81%), Postives = 111/135 (82.22%), Query Frame = 0


Query: 2   STSRN-ISPLQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADIFISETSDCFRFVAETDG 61
           S  RN +S  +SL GLNP KLRRLPH+FSRVLELP F+SDAD+ I E S+CFRFVAETDG
Sbjct: 19  SNGRNSLSRARSLLGLNPKKLRRLPHVFSRVLELP-FRSDADVSIVENSNCFRFVAETDG 78

Query: 62  LRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWRFRLPETALPELVTAAFAGGK 121
           +  EFRAHTV IHPGV+KVV+ QIG LE  LDELEID WRFRLPET LPEL TA F GGK
Sbjct: 79  VSEEFRAHTVQIHPGVIKVVVRQIGDLESTLDELEIDMWRFRLPETTLPELATAVFDGGK 138

Query: 122 LIVTVPKTEDAGKGA 136
           LIVTVPK EDAG+GA
Sbjct: 139 LIVTVPKREDAGEGA 152

[Close]

BLAST of Carg15901 vs. NCBI nr
Match: XP_023006455.1 (uncharacterized protein LOC111499177 [Cucurbita maxima])

HSP 1 Score: 194.5 bits (493), Expect = 2.7e-46
Identity = 97/136 (71.32%), Postives = 112/136 (82.35%), Query Frame = 0


Query: 6   NISPLQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADIFISETSDCFRFVAETDGLRREF 65
           ++S  QS  GLNP KLRRLPH+FSRVLELP F+SDAD+ I E SDCFRFVAET+G+  EF
Sbjct: 18  SLSRAQSFLGLNPKKLRRLPHVFSRVLELP-FRSDADVSILENSDCFRFVAETNGISDEF 77

Query: 66  RAHTVHIHPGVLKVVITQIGALELKLDELEIDTWRFRLPETALPELVTAAFAGGKLIVTV 125
           RAHTV IHPGV+KVV+ QIGALE  L+ELEID WRFRLP+T LPEL TAAFA GKL+VTV
Sbjct: 78  RAHTVQIHPGVIKVVVRQIGALESTLEELEIDMWRFRLPDTTLPELATAAFANGKLVVTV 137

Query: 126 PKTEDAGKGAIQHVSG 142
           PK EDAG+G   + +G
Sbjct: 138 PKREDAGEGTWGNKNG 152

[Close]

BLAST of Carg15901 vs. TAIR10
Match: AT4G14830.1 (unknown protein)

HSP 1 Score: 134.0 bits (336), Expect = 7.8e-32
Identity = 75/121 (61.98%), Postives = 88/121 (72.73%), Query Frame = 0


Query: 20  KLRRLPHLFSRVLELPFFKSDADIFISETSDCFRFVAETD-GLRREFRAHTVHIHPGVLK 79
           KLRRLPH+FSRVLELP  KSDAD+ + E+ DCFRFVAETD G     RA+ V IHPGV K
Sbjct: 29  KLRRLPHIFSRVLELP-LKSDADVAVEESHDCFRFVAETDGGGGGGVRAYMVEIHPGVTK 88

Query: 80  VVITQIG--ALELKLDELEIDTWRFRLPETALPELVTAAFAG-GKLIVTVPKTEDAGKGA 137
           +++   G  +L L LDELE+D WRFRLPE+  PELVT    G G+LIVTVPK ED G+  
Sbjct: 89  ILVRTNGSSSLGLSLDELELDVWRFRLPESTRPELVTVDCDGDGELIVTVPKIEDNGRDL 148

[Close]

BLAST of Carg15901 vs. TAIR10
Match: AT3G22530.1 (unknown protein)

HSP 1 Score: 129.4 bits (324), Expect = 1.9e-30
Identity = 71/120 (59.17%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 14  PGLNPNK-LRRLPHLFSRVLELPFFKSDADIFISETSDCFRFVAETDGLRR---EFRAHT 73
           P   P K LRRLPH+F+RVLELP  +S+AD+ + E  DCFRFVAET GL     E RA+ 
Sbjct: 53  PTREPGKNLRRLPHIFNRVLELP-LRSEADVAVEERHDCFRFVAETVGLCNGDGEMRAYM 112

Query: 74  VHIHPGVLKVVITQIG--ALELKLDELEIDTWRFRLPETALPELVTAAFAGGKLIVTVPK 128
           V IHPG+ K+V+   G  +L L LDELE+D WRFRLPE+  PELVT A   G LIVTVPK
Sbjct: 113 VEIHPGITKIVVRTNGSSSLGLSLDELELDVWRFRLPESTRPELVTVACVDGDLIVTVPK 171

[Close]

BLAST of Carg15901 vs. TAIR10
Match: AT3G46230.1 (heat shock protein 17.4)

HSP 1 Score: 42.0 bits (97), Expect = 4.0e-04
Identity = 34/105 (32.38%), Postives = 48/105 (45.71%), Query Frame = 0


Query: 39  SDADIFISETSDCFRFVAETDGLRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDT 98
           ++A +   ET +   F A+  GL++E     V +  G     I QI       +E + DT
Sbjct: 47  TNAKVDWRETPEAHVFKADVPGLKKE--EVKVEVEDG----NILQISGERSSENEEKSDT 106

Query: 99  W------------RFRLPETALPELVTAAFAGGKLIVTVPKTEDA 132
           W            RFRLPE A  E V A+   G L VTVPK +++
Sbjct: 107 WHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQES 145

[Close]

BLAST of Carg15901 vs. TrEMBL
Match: tr|A0A1S3BGR7|A0A1S3BGR7_CUCME (uncharacterized protein LOC103489672 OS=Cucumis melo OX=3656 GN=LOC103489672 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.0e-46
Identity = 101/135 (74.81%), Postives = 111/135 (82.22%), Query Frame = 0


Query: 2   STSRN-ISPLQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADIFISETSDCFRFVAETDG 61
           S  RN +S  +SL GLNP KLRRLPH+FSRVLELP F+SDAD+ I E S+CFRFVAETDG
Sbjct: 19  SNGRNSLSRARSLLGLNPKKLRRLPHVFSRVLELP-FRSDADVSIVENSNCFRFVAETDG 78

Query: 62  LRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWRFRLPETALPELVTAAFAGGK 121
           +  EFRAHTV IHPGV+KVV+ QIG LE  LDELEID WRFRLPET LPEL TA F GGK
Sbjct: 79  VSEEFRAHTVQIHPGVIKVVVRQIGDLESTLDELEIDMWRFRLPETTLPELATAVFDGGK 138

Query: 122 LIVTVPKTEDAGKGA 136
           LIVTVPK EDAG+GA
Sbjct: 139 LIVTVPKREDAGEGA 152

[Close]

BLAST of Carg15901 vs. TrEMBL
Match: tr|A0A0A0K3G1|A0A0A0K3G1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G234120 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.3e-46
Identity = 100/135 (74.07%), Postives = 111/135 (82.22%), Query Frame = 0


Query: 2   STSRN-ISPLQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADIFISETSDCFRFVAETDG 61
           S +RN IS  QSL GLNP KLRRLPH+FSRVLELP F+SDAD+ I E  +CFRFVAETDG
Sbjct: 19  SNARNSISRAQSLLGLNPKKLRRLPHVFSRVLELP-FRSDADVSIVENCNCFRFVAETDG 78

Query: 62  LRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWRFRLPETALPELVTAAFAGGK 121
           +  +FRAHTV IHPGV+KVV+ QIG LE  LDELEID WRFRLPET LP+L TA F GGK
Sbjct: 79  ITEDFRAHTVQIHPGVIKVVVRQIGDLESTLDELEIDMWRFRLPETTLPDLATAVFDGGK 138

Query: 122 LIVTVPKTEDAGKGA 136
           LIVTVPK EDAG+GA
Sbjct: 139 LIVTVPKREDAGEGA 152

[Close]

BLAST of Carg15901 vs. TrEMBL
Match: tr|A0A2I4G987|A0A2I4G987_9ROSI (uncharacterized protein LOC109005839 isoform X1 OS=Juglans regia OX=51240 GN=LOC109005839 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.0e-37
Identity = 83/141 (58.87%), Postives = 104/141 (73.76%), Query Frame = 0


Query: 1   MSTSRNISPLQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADIFISETSDCFRFVAETDG 60
           M+    +S  Q+L GL+  KLRRLPH+FSRVLELP F+SDAD+ + E  DCFRF+AETD 
Sbjct: 79  MNARDPLSEAQALLGLSSKKLRRLPHVFSRVLELP-FRSDADVSVEEKPDCFRFIAETDN 138

Query: 61  LRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWRFRLPETALPELVTAAFAGGK 120
             R  RAHTV IHPGV K+V+ + G+LEL LDELE+D WRFRLPE+  PEL +AAF  G+
Sbjct: 139 DIRNVRAHTVEIHPGVTKIVVRESGSLELSLDELELDMWRFRLPESTRPELASAAFVDGE 198

Query: 121 LIVTVPKTEDAGKGAIQHVSG 142
           LIVTVPK E+  + A ++  G
Sbjct: 199 LIVTVPKGEEGVENAEENGVG 218

[Close]

BLAST of Carg15901 vs. TrEMBL
Match: tr|A0A2I4G972|A0A2I4G972_9ROSI (uncharacterized protein LOC109005839 isoform X3 OS=Juglans regia OX=51240 GN=LOC109005839 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.0e-37
Identity = 83/141 (58.87%), Postives = 104/141 (73.76%), Query Frame = 0


Query: 1   MSTSRNISPLQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADIFISETSDCFRFVAETDG 60
           M+    +S  Q+L GL+  KLRRLPH+FSRVLELP F+SDAD+ + E  DCFRF+AETD 
Sbjct: 79  MNARDPLSEAQALLGLSSKKLRRLPHVFSRVLELP-FRSDADVSVEEKPDCFRFIAETDN 138

Query: 61  LRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWRFRLPETALPELVTAAFAGGK 120
             R  RAHTV IHPGV K+V+ + G+LEL LDELE+D WRFRLPE+  PEL +AAF  G+
Sbjct: 139 DIRNVRAHTVEIHPGVTKIVVRESGSLELSLDELELDMWRFRLPESTRPELASAAFVDGE 198

Query: 121 LIVTVPKTEDAGKGAIQHVSG 142
           LIVTVPK E+  + A ++  G
Sbjct: 199 LIVTVPKGEEGVENAEENGVG 218

[Close]

BLAST of Carg15901 vs. TrEMBL
Match: tr|A0A2I4G973|A0A2I4G973_9ROSI (uncharacterized protein LOC109005839 isoform X2 OS=Juglans regia OX=51240 GN=LOC109005839 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.0e-37
Identity = 83/141 (58.87%), Postives = 104/141 (73.76%), Query Frame = 0


Query: 1   MSTSRNISPLQSLPGLNPNKLRRLPHLFSRVLELPFFKSDADIFISETSDCFRFVAETDG 60
           M+    +S  Q+L GL+  KLRRLPH+FSRVLELP F+SDAD+ + E  DCFRF+AETD 
Sbjct: 79  MNARDPLSEAQALLGLSSKKLRRLPHVFSRVLELP-FRSDADVSVEEKPDCFRFIAETDN 138

Query: 61  LRREFRAHTVHIHPGVLKVVITQIGALELKLDELEIDTWRFRLPETALPELVTAAFAGGK 120
             R  RAHTV IHPGV K+V+ + G+LEL LDELE+D WRFRLPE+  PEL +AAF  G+
Sbjct: 139 DIRNVRAHTVEIHPGVTKIVVRESGSLELSLDELELDMWRFRLPESTRPELASAAFVDGE 198

Query: 121 LIVTVPKTEDAGKGAIQHVSG 142
           LIVTVPK E+  + A ++  G
Sbjct: 199 LIVTVPKGEEGVENAEENGVG 218

The following BLAST results are available for this feature:

BLAST of Carg15901 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930297.1	9.4e-68	95.07	17.4 kDa class I heat shock protein-like [Cucurbita moschata]	[more]
XP_023514761.1	2.6e-65	97.04	17.4 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022999953.1	1.0e-61	85.14	17.4 kDa class I heat shock protein-like [Cucurbita maxima]	[more]
XP_008447155.1	1.6e-46	74.81	PREDICTED: uncharacterized protein LOC103489672 [Cucumis melo]	[more]
XP_023006455.1	2.7e-46	71.32	uncharacterized protein LOC111499177 [Cucurbita maxima]	[more]

BLAST of Carg15901 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G14830.1	7.8e-32	61.98	unknown protein	[more]
AT3G22530.1	1.9e-30	59.17	unknown protein	[more]
AT3G46230.1	4.0e-04	32.38	heat shock protein 17.4	[more]

BLAST of Carg15901 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg15901 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BGR7\|A0A1S3BGR7_CUCME	1.0e-46	74.81	uncharacterized protein LOC103489672 OS=Cucumis melo OX=3656 GN=LOC103489672 PE=...	[more]
tr\|A0A0A0K3G1\|A0A0A0K3G1_CUCSA	2.3e-46	74.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G234120 PE=4 SV=1	[more]
tr\|A0A2I4G987\|A0A2I4G987_9ROSI	2.0e-37	58.87	uncharacterized protein LOC109005839 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2I4G972\|A0A2I4G972_9ROSI	2.0e-37	58.87	uncharacterized protein LOC109005839 isoform X3 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2I4G973\|A0A2I4G973_9ROSI	2.0e-37	58.87	uncharacterized protein LOC109005839 isoform X2 OS=Juglans regia OX=51240 GN=LOC...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15901-RA	Carg15901-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 77..97
None	No IPR available	PANTHER	PTHR33879:SF3	SUBFAMILY NOT NAMED	coord: 11..134
None	No IPR available	PANTHER	PTHR33879	FAMILY NOT NAMED	coord: 11..134
None	No IPR available	CDD	cd00298	ACD_sHsps_p23-like	coord: 45..127 e-value: 5.61102E-6 score: 40.2651
IPR008978	HSP20-like chaperone	SUPERFAMILY	SSF49764	HSP20-like chaperones	coord: 100..133

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15901	Cla021620	Watermelon (97103) v1	carwmB0316
Carg15901	Cla009418	Watermelon (97103) v1	carwmB0317
Carg15901	Csa3G146610	Cucumber (Chinese Long) v2	carcuB0350
Carg15901	Csa7G234120	Cucumber (Chinese Long) v2	carcuB0355
Carg15901	MELO3C006527	Melon (DHL92) v3.5.1	carmeB0332
Carg15901	MELO3C012655	Melon (DHL92) v3.5.1	carmeB0329
Carg15901	ClCG06G006270	Watermelon (Charleston Gray)	carwcgB0318
Carg15901	CSPI03G13080	Wild cucumber (PI 183967)	carcpiB0355
Carg15901	CSPI07G10510	Wild cucumber (PI 183967)	carcpiB0359
Carg15901	Cucsa.239440	Cucumber (Gy14) v1	carcgyB0382
Carg15901	Cucsa.254350	Cucumber (Gy14) v1	carcgyB0383
Carg15901	CmaCh17G002270	Cucurbita maxima (Rimu)	carcmaB0455
Carg15901	CmaCh14G017120	Cucurbita maxima (Rimu)	carcmaB0453
Carg15901	CmoCh14G017560	Cucurbita moschata (Rifu)	carcmoB0444
Carg15901	CmoCh08G011140	Cucurbita moschata (Rifu)	carcmoB0449
Carg15901	CmoCh06G014080	Cucurbita moschata (Rifu)	carcmoB0448
Carg15901	Lsi05G016090	Bottle gourd (USVL1VR-Ls)	carlsiB299
Carg15901	Cp4.1LG03g10690	Cucurbita pepo (Zucchini)	carcpeB0454
Carg15901	Cp4.1LG08g04070	Cucurbita pepo (Zucchini)	carcpeB0456
Carg15901	CsGy3G013230	Cucumber (Gy14) v2	carcgybB0333
Carg15901	CsGy7G009860	Cucumber (Gy14) v2	carcgybB0338
Carg15901	MELO3C006527.2	Melon (DHL92) v3.6.1	carmedB0340
Carg15901	MELO3C012655.2	Melon (DHL92) v3.6.1	carmedB0337
Carg15901	CsaV3_7G022450	Cucumber (Chinese Long) v3	carcucB0359
Carg15901	CsaV3_3G013240	Cucumber (Chinese Long) v3	carcucB0355
Carg15901	Cla97C05G086280	Watermelon (97103) v2	carwmbB0333
Carg15901	Cla97C06G115780	Watermelon (97103) v2	carwmbB0334
Carg15901	Bhi12G001512	Wax gourd	carwgoB0407
Carg15901	Bhi01G000579	Wax gourd	carwgoB0411

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15901	Carg10028	Silver-seed gourd	carcarB260
Carg15901	Carg17424	Silver-seed gourd	carcarB347
Carg15901	Carg23516	Silver-seed gourd	carcarB348

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15901	Silver-seed gourd	carcarB128
Carg15901	Cucumber (Gy14) v2	carcgybB0339
Carg15901	Cucumber (Gy14) v1	carcgyB0380
Carg15901	Cucurbita maxima (Rimu)	carcmaB0456
Carg15901	Cucurbita maxima (Rimu)	carcmaB0457
Carg15901	Cucurbita maxima (Rimu)	carcmaB0458
Carg15901	Cucurbita moschata (Rifu)	carcmoB0446
Carg15901	Cucurbita moschata (Rifu)	carcmoB0447
Carg15901	Cucurbita pepo (Zucchini)	carcpeB0450
Carg15901	Cucurbita pepo (Zucchini)	carcpeB0451
Carg15901	Cucurbita pepo (Zucchini)	carcpeB0453
Carg15901	Wild cucumber (PI 183967)	carcpiB0360
Carg15901	Cucumber (Chinese Long) v2	carcuB0356
Carg15901	Cucumber (Chinese Long) v3	carcucB0360
Carg15901	Bottle gourd (USVL1VR-Ls)	carlsiB296
Carg15901	Bottle gourd (USVL1VR-Ls)	carlsiB297
Carg15901	Melon (DHL92) v3.5.1	carmeB0328
Carg15901	Watermelon (Charleston Gray)	carwcgB0316
Carg15901	Watermelon (Charleston Gray)	carwcgB0317
Carg15901	Watermelon (97103) v1	carwmB0314
Carg15901	Watermelon (97103) v2	carwmbB0336