BLAST of Carg15818 vs. NCBI nr
Match:
XP_022960919.1 (pentatricopeptide repeat-containing protein At1g34160 [Cucurbita moschata] >XP_022960927.1 pentatricopeptide repeat-containing protein At1g34160 [Cucurbita moschata])
HSP 1 Score: 1090.9 bits (2820), Expect = 0.0e+00
Identity = 571/576 (99.13%), Postives = 571/576 (99.13%), Query Frame = 0
Query: 1 MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH
Sbjct: 1 MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
Query: 61 IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARS 120
IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTAS GPHRVDALTCSFALKACARALARS
Sbjct: 61 IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS 120
Query: 121 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
EVMQ HSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA
Sbjct: 121 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240
QGGRPSDAIDLFKRMKEDGNLRPN VTVQGALSACSQLGTLKEGENV KYIAEENLDTVV
Sbjct: 181 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVV 240
Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR
Sbjct: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
Query: 361 XXEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
XXEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR
Sbjct: 361 XXEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI
Sbjct: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
Query: 481 KAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
KAIGYTAETGNVLHDIEEEDK NVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH
Sbjct: 481 KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW
Sbjct: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 576
BLAST of Carg15818 vs. NCBI nr
Match:
XP_022990287.1 (pentatricopeptide repeat-containing protein At1g34160 isoform X1 [Cucurbita maxima])
HSP 1 Score: 1079.7 bits (2791), Expect = 0.0e+00
Identity = 530/576 (92.01%), Postives = 534/576 (92.71%), Query Frame = 0
Query: 1 MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH
Sbjct: 23 MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 82
Query: 61 IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARS 120
+HSPSTKDWNAVIRGTALSSNPSNA+FWYRTM AS GPHRVDALTCSFALKACARALARS
Sbjct: 83 VHSPSTKDWNAVIRGTALSSNPSNALFWYRTMNASNGPHRVDALTCSFALKACARALARS 142
Query: 121 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
EVMQ HSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA
Sbjct: 143 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 202
Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240
QGGRPSDAIDLFKRMKEDGNLRPN VTVQGALSACSQLGTLKEGENVHKYI EENLDT+V
Sbjct: 203 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVHKYIVEENLDTIV 262
Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDG+KALDLFEKLGR
Sbjct: 263 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGYKALDLFEKLGR 322
Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
SGI PDAISYLAVLCACNHAGLIEDGLK
Sbjct: 323 SGICPDAISYLAVLCACNHAGLIEDGLKLCNSMMQRGVAPNIKHYGVVVDLLGRAGRLKE 382
Query: 361 XXEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
EIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR
Sbjct: 383 AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 442
Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI
Sbjct: 443 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 502
Query: 481 KAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
KAIGYTAETGNVLHDIEEEDK NVLC HSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH
Sbjct: 503 KAIGYTAETGNVLHDIEEEDKENVLCCHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 562
Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW
Sbjct: 563 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 598
BLAST of Carg15818 vs. NCBI nr
Match:
XP_023526446.1 (pentatricopeptide repeat-containing protein At1g34160 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1075.1 bits (2779), Expect = 0.0e+00
Identity = 562/576 (97.57%), Postives = 564/576 (97.92%), Query Frame = 0
Query: 1 MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALH+FRH
Sbjct: 1 MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHVFRH 60
Query: 61 IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARS 120
IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTAS GPHRVDALTCSFALKACARALARS
Sbjct: 61 IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS 120
Query: 121 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
EVMQ HSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA
Sbjct: 121 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240
QGGRPSDAIDLFKRMKEDGNLRPN VTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV
Sbjct: 181 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240
Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR
Sbjct: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
SGIYPDAISYLAVLCACNHAGLIE+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 SGIYPDAISYLAVLCACNHAGLIEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
Query: 361 XXEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
XX MPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR
Sbjct: 361 XXXXXXXMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI
Sbjct: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
Query: 481 KAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
KAIGYTAETGNVLHDIEEEDK NVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH
Sbjct: 481 KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW
Sbjct: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 576
BLAST of Carg15818 vs. NCBI nr
Match:
XP_004140941.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g34160 [Cucumis sativus] >KGN46094.1 hypothetical protein Csa_6G052690 [Cucumis sativus])
HSP 1 Score: 964.1 bits (2491), Expect = 2.1e-277
Identity = 469/576 (81.42%), Postives = 506/576 (87.85%), Query Frame = 0
Query: 1 MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
MAYF+LLLQKCSSFSQIKQLQANLI NG FHFSSSRTKLLELCAIS FGDLS+ALHIFR+
Sbjct: 1 MAYFNLLLQKCSSFSQIKQLQANLIINGDFHFSSSRTKLLELCAISSFGDLSYALHIFRY 60
Query: 61 IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARS 120
I PST DWNAVIRGTALSS+P+NA+FWYR M AS G HR+DALTCSFALKACARALARS
Sbjct: 61 IPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKACARALARS 120
Query: 121 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
E +Q HSQ+LRFGF+ADVLLQTTLLDAYAK+ DLD AQK+FDEMP+PDIASWN+LIAGFA
Sbjct: 121 EAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFA 180
Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240
QG RP+DAI FKRMK DGNLRPNAVTVQGAL ACSQLG LKEGE+VHKYI EE L++ V
Sbjct: 181 QGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNSNV 240
Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
QVCNVVIDMYAKCGS+DKAYWVFENMRC+KSLITWNTMIMAFAMHGDGHKALDLFEKLGR
Sbjct: 241 QVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
SG+ PDA+SYLAVLCACNHAGL+EDGLK
Sbjct: 301 SGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQRGLEPNIKHYGSMVDLLGRAGRLKE 360
Query: 361 XXEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
+IVSS+PFPNMVLWQTLLGACRTYGDV+MAE+ASRKLVEMGFISCGDFVLLSNVYAAR
Sbjct: 361 AYDIVSSLPFPNMVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGDFVLLSNVYAAR 420
Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
+RWDDVGRVRDAMRRRDVKKTPGFSYIE+KG M+KF+ GD+SHSSCREIYAKLDEI RI
Sbjct: 421 QRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRI 480
Query: 481 KAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
KA GY+A+T NVLHDI +EDK N LCYHSEKLAVAFGL+CTEEGTPIQVIKNLRICGDCH
Sbjct: 481 KAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCH 540
Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
VVIKLISK Y REI VRDRTRFHRFK+GLCSCKDYW
Sbjct: 541 VVIKLISKIYIREIIVRDRTRFHRFKEGLCSCKDYW 576
BLAST of Carg15818 vs. NCBI nr
Match:
XP_008456696.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g34160 [Cucumis melo])
HSP 1 Score: 951.0 bits (2457), Expect = 1.8e-273
Identity = 460/576 (79.86%), Postives = 501/576 (86.98%), Query Frame = 0
Query: 1 MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
MAYF+LLLQKCSSFS IKQLQANLI NG FHFSSSRTKLLELCA+S GDLS+ALHIFR+
Sbjct: 1 MAYFNLLLQKCSSFSHIKQLQANLIINGDFHFSSSRTKLLELCAVSSCGDLSYALHIFRY 60
Query: 61 IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARS 120
I PST DWNA+IRGTALSS+P+NA+ WYR M AS GPHR+DALTCSFALKACARALA S
Sbjct: 61 IRYPSTNDWNAIIRGTALSSDPANAVVWYRAMAASNGPHRIDALTCSFALKACARALACS 120
Query: 121 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
E +Q HSQ+LRFGF+ADVLLQTTLLD YAKV DLD AQK+FDEMP PDIASWN+LI+GFA
Sbjct: 121 EAIQLHSQLLRFGFNADVLLQTTLLDVYAKVGDLDLAQKLFDEMPRPDIASWNALISGFA 180
Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240
QG RP+DAI +FKRMKE GNLRPNAVTVQGAL ACSQLGTLKEGENVHKYI EE LD V
Sbjct: 181 QGSRPADAIMMFKRMKEGGNLRPNAVTVQGALLACSQLGTLKEGENVHKYIVEEKLDMNV 240
Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
QVCNVVIDMYAKCGS+DKAYWVFENMRC+KSLITWNTMIMAFAMHGDG++ALDLF+KLGR
Sbjct: 241 QVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGYEALDLFKKLGR 300
Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
SG+ PDA+SYLAVLCACNHAGL+EDGLK
Sbjct: 301 SGMSPDAVSYLAVLCACNHAGLVEDGLKLFNLMAQRGLEPNIKHYGSMVDLLGRAGRLKE 360
Query: 361 XXEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
+IV+S+PFPNMVLWQTLLGACRTYGDV+MAE+AS KLVEMGFISCGDFVLLSNVYAAR
Sbjct: 361 AYDIVNSLPFPNMVLWQTLLGACRTYGDVEMAELASGKLVEMGFISCGDFVLLSNVYAAR 420
Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
+RWDDVGRVRDAMR RDVKKTPGFSYIE+KG M++F+YGD+SHSSCREIYAKLDEI RI
Sbjct: 421 QRWDDVGRVRDAMRIRDVKKTPGFSYIEIKGKMYQFVYGDQSHSSCREIYAKLDEINLRI 480
Query: 481 KAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
KA GY+A+T NVLHDI +EDK N LCYHSEKLAVAFGL+CTEEG PIQVIKNLRICGDCH
Sbjct: 481 KAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGIPIQVIKNLRICGDCH 540
Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
VVIKLISK YNREI VRDRTRFHRFK+GLCSCKDYW
Sbjct: 541 VVIKLISKIYNREIIVRDRTRFHRFKEGLCSCKDYW 576
BLAST of Carg15818 vs. TAIR10
Match:
AT1G34160.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 637.9 bits (1644), Expect = 6.1e-183
Identity = 329/582 (56.53%), Postives = 401/582 (68.90%), Query Frame = 0
Query: 3 YFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRHIH 62
Y + ++QKC SFSQIKQLQ++ +T GHF S R++LLE CAISPFGDLS A+ IFR+I
Sbjct: 5 YMETMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIP 64
Query: 63 SPSTKDWNAVIRGTALSSNPSNAIFWYRTM----TASKGPHRVDALTCSFALKACARALA 122
P T DWNA+IRG A SS+PS A WYR+M ++S RVDALTCSF LKACARAL
Sbjct: 65 KPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALC 124
Query: 123 RSEVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAG 182
S + Q H Q+ R G AD LL TTLLDAY+K DL A K+FDEMP D+ASWN+LIAG
Sbjct: 125 SSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAG 184
Query: 183 FAQGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDT 242
G R S+A++L+KRM+ +G +R + VTV AL ACS LG +KEGEN+ + +N
Sbjct: 185 LVSGNRASEAMELYKRMETEG-IRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN--- 244
Query: 243 VVQVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKL 302
V V N IDMY+KCG VDKAY VFE +KS++TWNTMI FA+HG+ H+AL++F+KL
Sbjct: 245 -VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKL 304
Query: 303 GRSGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 362
+GI PD +SYLA L AC HAGL+E GL
Sbjct: 305 EDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRL 364
Query: 363 XXXXEIVSSMP-FPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVY 422
+I+ SM P+ VLWQ+LLGA Y DV+MAE+ASR++ EMG + GDFVLLSNVY
Sbjct: 365 REAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVY 424
Query: 423 AARRRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIM 482
AA+ RW DVGRVRD M + VKK PG SYIE KG +H+F D+SH REIY K+DEI
Sbjct: 425 AAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIR 484
Query: 483 FRIKAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSC---TEEGTPIQVIKNLR 542
F+I+ GY A+TG VLHDI EE+K N LCYHSEKLAVA+GL +E +P++VI NLR
Sbjct: 485 FKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLR 544
Query: 543 ICGDCHVVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
ICGDCHVV K ISK Y REI VRDR RFHRFKDG CSC+D+W
Sbjct: 545 ICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
BLAST of Carg15818 vs. TAIR10
Match:
AT3G56550.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 407.5 bits (1046), Expect = 1.3e-113
Identity = 210/574 (36.59%), Postives = 334/574 (58.19%), Query Frame = 0
Query: 7 LLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRHIHS-PS 66
+LQ C+S +++++ +++I NG H S LL CA+S G LSHA +F H S PS
Sbjct: 11 MLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPS 70
Query: 67 TKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARSEVMQF 126
T DWN +IRG + SS+P N+I +Y M S R D T +FALK+C R + + ++
Sbjct: 71 TSDWNYLIRGFSNSSSPLNSILFYNRMLLS-SVSRPDLFTFNFALKSCERIKSIPKCLEI 130
Query: 127 HSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGRP 186
H V+R GF D ++ T+L+ Y+ ++ A KVFDEMP D+ SWN +I F+ G
Sbjct: 131 HGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLH 190
Query: 187 SDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVVQVCNV 246
+ A+ ++KRM +G + ++ T+ LS+C+ + L G +H+ + ++ V V N
Sbjct: 191 NQALSMYKRMGNEG-VCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNA 250
Query: 247 VIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGIYP 306
+IDMYAKCGS++ A VF MR ++ ++TWN+MI+ + +HG G +A+ F K+ SG+ P
Sbjct: 251 LIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRP 310
Query: 307 DAISYLAVLCACNHAGLIEDGLK--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 366
+AI++L +L C+H GL+++G++
Sbjct: 311 NAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEM 370
Query: 367 IVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRRW 426
I +S + VLW+TLLG+C+ + ++++ E+A +KLV++ + GD+VL++++Y+A
Sbjct: 371 IYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDA 430
Query: 427 DDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKAI 486
+R +R D++ PG+S+IE+ +HKF+ D+ H IY++L E++ R
Sbjct: 431 QAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILA 490
Query: 487 GYTAETGN-VLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVV 546
GY E N + + + HSEKLA+A+GL T GT +++ KNLR+C DCH
Sbjct: 491 GYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSF 550
Query: 547 IKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
K +SK++NREI VRDR RFH F DG+CSC DYW
Sbjct: 551 TKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
BLAST of Carg15818 vs. TAIR10
Match:
AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 393.7 bits (1010), Expect = 2.0e-109
Identity = 249/571 (43.61%), Postives = 358/571 (62.70%), Query Frame = 0
Query: 12 SSFSQIKQLQANLITNGHFHFSSSRTK--LLELCAISPFGDLSHALHIFRHIHSP-STKD 71
SS ++++Q+ A I +G + K + L ++ +S+A +F I P +
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87
Query: 72 WNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARSEVMQFHSQ 131
WN +IRG A N +A YR M S G D T F +KA HS
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVS-GLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 147
Query: 132 VLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGRPSDA 191
V+R GF + + +Q +LL YA D+ A KVFD+MPE D+ +WNS+I GFA+ G+P +A
Sbjct: 148 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 207
Query: 192 IDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVVQVCNVVID 251
+ L+ M G ++P+ T+ LSAC+++G L G+ VH Y+ + L + NV++D
Sbjct: 208 LALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 267
Query: 252 MYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKL-GRSGIYPDA 311
+YA+CG V++A +F+ M +K+ ++W ++I+ A++G G +A++LF+ + G+ P
Sbjct: 268 LYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCE 327
Query: 312 ISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIVSS 371
I+++ +L AC+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 328 ITFVGILYACSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 387
Query: 372 MP--FPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRRWDD 431
PN+V+W+TLLGAC +GD +AE A +++++ GD+VLLSN+YA+ +RW D
Sbjct: 388 XXPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSD 447
Query: 432 VGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKAIGY 491
V ++R M R VKK PG S +EV +H+FL GD+SH IYAKL E+ R+++ GY
Sbjct: 448 VQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGY 507
Query: 492 TAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVVIKL 551
+ NV D+EEE+K N + YHSEK+A+AF L T E +PI V+KNLR+C DCH+ IKL
Sbjct: 508 VPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKL 567
Query: 552 ISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
+SK YNREI VRDR+RFH FK+G CSC+DYW
Sbjct: 568 VSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
BLAST of Carg15818 vs. TAIR10
Match:
AT1G31920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 382.9 bits (982), Expect = 3.5e-106
Identity = 200/574 (34.84%), Postives = 329/574 (57.32%), Query Frame = 0
Query: 7 LLQKCSSFSQIKQLQANLITNGHFHFSS-SRTKLLELCAISPF-GDLSHALHIFRHIHSP 66
LL++C + + KQ+ A I F+ SS S + +L CA S + +++A IFR I P
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDP 95
Query: 67 STKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARSEVMQ 126
T D+N +IRG + A+ +Y M + + D T LKAC R + E Q
Sbjct: 96 CTFDFNTMIRGYVNVMSFEEALCFYNEM--MQRGNEPDNFTYPCLLKACTRLKSIREGKQ 155
Query: 127 FHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGR 186
H QV + G +ADV +Q +L++ Y + +++ + VF+++ ASW+S+++ A G
Sbjct: 156 IHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGM 215
Query: 187 PSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVVQVCN 246
S+ + LF+ M + NL+ + AL AC+ G L G ++H ++ + + V
Sbjct: 216 WSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQT 275
Query: 247 VVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGIY 306
++DMY KCG +DKA +F+ M +++ +T++ MI A+HG+G AL +F K+ + G+
Sbjct: 276 SLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLE 335
Query: 307 PDAISYLAVLCACNHAGLIEDGLK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 366
PD + Y++VL AC+H+GL+++G + E
Sbjct: 336 PDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALE 395
Query: 367 IVSSMPF-PNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRR 426
+ S+P N V+W+T L CR ++++ ++A+++L+++ + GD++L+SN+Y+ +
Sbjct: 396 TIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQM 455
Query: 427 WDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKA 486
WDDV R R + + +K+TPGFS +E+KG H+F+ DRSH C+EIY L ++ +++K
Sbjct: 456 WDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKF 515
Query: 487 IGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVV 546
GY+ + +L +++EE+K L HS+K+A+AFGL T G+ I++ +NLR+C DCH
Sbjct: 516 EGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTY 575
Query: 547 IKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
K IS Y REI VRDR RFH FK G CSCKDYW
Sbjct: 576 TKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
BLAST of Carg15818 vs. TAIR10
Match:
AT3G47530.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 377.1 bits (967), Expect = 1.9e-104
Identity = 208/564 (36.88%), Postives = 314/564 (55.67%), Query Frame = 0
Query: 20 LQANLITNGH-FHFSSSRTKLLELCAISPFGDLSHALHIFRHIHSPSTKDWNAVIRGTAL 79
L+ +LI N FH SR L ++ P D++++ +F +P+ N +IR +L
Sbjct: 35 LRTSLIRNSDVFHHFLSRLAL----SLIP-RDINYSCRVFSQRLNPTLSHCNTMIRAFSL 94
Query: 80 SSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARSEVMQFHSQVLRFGFDADV 139
S P +R++ + + L+ SFALK C ++ +Q H ++ GF +D
Sbjct: 95 SQTPCEGFRLFRSLRRNSS-LPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDS 154
Query: 140 LLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGRPSDAIDLFKRMKE- 199
LL TTL+D Y+ E+ A KVFDE+P+ D SWN L + + + R D + LF +MK
Sbjct: 155 LLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKND 214
Query: 200 -DGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVVQVCNVVIDMYAKCGSV 259
DG ++P+ VT AL AC+ LG L G+ VH +I E L + + N ++ MY++CGS+
Sbjct: 215 VDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSM 274
Query: 260 DKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGIYPDAISYLAVLCA 319
DKAY VF MR E+++++W +I AM+G G +A++ F ++ + GI P+ + +L A
Sbjct: 275 DKAYQVFYGMR-ERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSA 334
Query: 320 CNHAGLIEDGLK--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIVSSMPF-PNM 379
C+H+GL+ +G+ ++ SM P+
Sbjct: 335 CSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDS 394
Query: 380 VLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRRWDDVGRVRDAM 439
+W+TLLGACR +GDV++ E L+E+ GD+VLL N Y+ +W+ V +R M
Sbjct: 395 TIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLM 454
Query: 440 RRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKAIGYTAETGNVL 499
+ + + PG S IE++G +H+F+ D SH EIY L EI ++K GY AE + L
Sbjct: 455 KEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSEL 514
Query: 500 HDIE-EEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVVIKLISKSYNR 559
H++E EE+K L YHSEKLA+AFG+ T GT I+V KNLR C DCH K +S Y+R
Sbjct: 515 HNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDR 574
Query: 560 EIFVRDRTRFHRFKDGLCSCKDYW 577
+ VRDR+RFH FK G CSC D+W
Sbjct: 575 IVIVRDRSRFHHFKGGSCSCNDFW 591
BLAST of Carg15818 vs. Swiss-Prot
Match:
sp|Q9FX24|PPR71_ARATH (Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H68 PE=2 SV=2)
HSP 1 Score: 637.9 bits (1644), Expect = 1.1e-181
Identity = 329/582 (56.53%), Postives = 401/582 (68.90%), Query Frame = 0
Query: 3 YFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRHIH 62
Y + ++QKC SFSQIKQLQ++ +T GHF S R++LLE CAISPFGDLS A+ IFR+I
Sbjct: 5 YMETMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIP 64
Query: 63 SPSTKDWNAVIRGTALSSNPSNAIFWYRTM----TASKGPHRVDALTCSFALKACARALA 122
P T DWNA+IRG A SS+PS A WYR+M ++S RVDALTCSF LKACARAL
Sbjct: 65 KPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALC 124
Query: 123 RSEVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAG 182
S + Q H Q+ R G AD LL TTLLDAY+K DL A K+FDEMP D+ASWN+LIAG
Sbjct: 125 SSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAG 184
Query: 183 FAQGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDT 242
G R S+A++L+KRM+ +G +R + VTV AL ACS LG +KEGEN+ + +N
Sbjct: 185 LVSGNRASEAMELYKRMETEG-IRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN--- 244
Query: 243 VVQVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKL 302
V V N IDMY+KCG VDKAY VFE +KS++TWNTMI FA+HG+ H+AL++F+KL
Sbjct: 245 -VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKL 304
Query: 303 GRSGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 362
+GI PD +SYLA L AC HAGL+E GL
Sbjct: 305 EDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRL 364
Query: 363 XXXXEIVSSMP-FPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVY 422
+I+ SM P+ VLWQ+LLGA Y DV+MAE+ASR++ EMG + GDFVLLSNVY
Sbjct: 365 REAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVY 424
Query: 423 AARRRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIM 482
AA+ RW DVGRVRD M + VKK PG SYIE KG +H+F D+SH REIY K+DEI
Sbjct: 425 AAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIR 484
Query: 483 FRIKAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSC---TEEGTPIQVIKNLR 542
F+I+ GY A+TG VLHDI EE+K N LCYHSEKLAVA+GL +E +P++VI NLR
Sbjct: 485 FKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLR 544
Query: 543 ICGDCHVVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
ICGDCHVV K ISK Y REI VRDR RFHRFKDG CSC+D+W
Sbjct: 545 ICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
BLAST of Carg15818 vs. Swiss-Prot
Match:
sp|B8YEK4|OGR1_ORYSJ (Pentatricopeptide repeat-containing protein OGR1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=OGR1 PE=2 SV=1)
HSP 1 Score: 528.1 bits (1359), Expect = 1.2e-148
Identity = 282/583 (48.37%), Postives = 371/583 (63.64%), Query Frame = 0
Query: 3 YFDLLLQKCSSFSQIKQLQANLITNGHF-HFSSSRTKLLELCAISPF-GDLSHALHIFRH 62
+ + LL + +S Q A L+T+GH R + L+ A+SP L HAL + R
Sbjct: 9 HLESLLPRLASLRHYLQFHARLLTSGHLGAHPGLRARFLDRLALSPHPAALPHALLLLRS 68
Query: 63 IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARS 122
+ +P+T D NA +RG A S +P+ ++ R DAL+ SFALKA AR
Sbjct: 69 LPTPATNDLNAALRGLAASPHPARSLLLLAGRLLPALLPRPDALSLSFALKASARCSDAH 128
Query: 123 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 182
+Q H+ VLR G ADV L TTLLD+YAK DL A+KVFDEM D+A+WNSL+AG A
Sbjct: 129 TTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVFDEMTVRDVATWNSLLAGLA 188
Query: 183 QGGRPSDAIDLFKRMKED-----GNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEEN 242
QG P+ A+ LF R+ PN VT+ ALSAC+Q+G LK+G VH++
Sbjct: 189 QGTEPNLALALFHRLANSFQELPSREEPNEVTIVAALSACAQIGLLKDGMYVHEFAKRFG 248
Query: 243 LDTVVQVCNVVIDMYAKCGSVDKAYWVFENMRCE-KSLITWNTMIMAFAMHGDGHKALDL 302
LD V+VCN +IDMY+KCGS+ +A VF +++ E ++L+++N I A +MHG G AL L
Sbjct: 249 LDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQAHSMHGHGGDALRL 308
Query: 303 FEKLGRSGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXX 362
F+++ + I PD ++YLAVLC CNH+GL++DGL+
Sbjct: 309 FDEM-PTRIEPDGVTYLAVLCGCNHSGLVDDGLR---VFNSMRVAPNMKHYGTIVDLLGR 368
Query: 363 XXXXXXXXEIVSSMPFP-NMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLL 422
+ V SMPFP ++VLWQTLLGA + +G V++AE+A+ KL E+G GD+VLL
Sbjct: 369 AGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDYVLL 428
Query: 423 SNVYAARRRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKL 482
SNVYA++ RW DVGRVRD MR DV+K PGFSY E+ G MHKF+ GD+ H +EIY L
Sbjct: 429 SNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEIDGVMHKFINGDKEHPRWQEIYRAL 488
Query: 483 DEIMFRIKAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNL 542
++I+ RI +GY ET NVLHDI EE+K LCYHSEKLA+AFGL T G ++VIKNL
Sbjct: 489 EDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKNL 548
Query: 543 RICGDCHVVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
RICGDCHVV KLISK+Y R I +RDR RFHRF+DG CSC+DYW
Sbjct: 549 RICGDCHVVAKLISKAYGRVIVIRDRARFHRFEDGQCSCRDYW 587
BLAST of Carg15818 vs. Swiss-Prot
Match:
sp|Q9LXY5|PP284_ARATH (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H80 PE=2 SV=1)
HSP 1 Score: 407.5 bits (1046), Expect = 2.4e-112
Identity = 210/574 (36.59%), Postives = 334/574 (58.19%), Query Frame = 0
Query: 7 LLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRHIHS-PS 66
+LQ C+S +++++ +++I NG H S LL CA+S G LSHA +F H S PS
Sbjct: 11 MLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPS 70
Query: 67 TKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARSEVMQF 126
T DWN +IRG + SS+P N+I +Y M S R D T +FALK+C R + + ++
Sbjct: 71 TSDWNYLIRGFSNSSSPLNSILFYNRMLLS-SVSRPDLFTFNFALKSCERIKSIPKCLEI 130
Query: 127 HSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGRP 186
H V+R GF D ++ T+L+ Y+ ++ A KVFDEMP D+ SWN +I F+ G
Sbjct: 131 HGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLH 190
Query: 187 SDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVVQVCNV 246
+ A+ ++KRM +G + ++ T+ LS+C+ + L G +H+ + ++ V V N
Sbjct: 191 NQALSMYKRMGNEG-VCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNA 250
Query: 247 VIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGIYP 306
+IDMYAKCGS++ A VF MR ++ ++TWN+MI+ + +HG G +A+ F K+ SG+ P
Sbjct: 251 LIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRP 310
Query: 307 DAISYLAVLCACNHAGLIEDGLK--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 366
+AI++L +L C+H GL+++G++
Sbjct: 311 NAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEM 370
Query: 367 IVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRRW 426
I +S + VLW+TLLG+C+ + ++++ E+A +KLV++ + GD+VL++++Y+A
Sbjct: 371 IYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDA 430
Query: 427 DDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKAI 486
+R +R D++ PG+S+IE+ +HKF+ D+ H IY++L E++ R
Sbjct: 431 QAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILA 490
Query: 487 GYTAETGN-VLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVV 546
GY E N + + + HSEKLA+A+GL T GT +++ KNLR+C DCH
Sbjct: 491 GYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSF 550
Query: 547 IKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
K +SK++NREI VRDR RFH F DG+CSC DYW
Sbjct: 551 TKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
BLAST of Carg15818 vs. Swiss-Prot
Match:
sp|A8MQA3|PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)
HSP 1 Score: 393.7 bits (1010), Expect = 3.6e-108
Identity = 249/571 (43.61%), Postives = 358/571 (62.70%), Query Frame = 0
Query: 12 SSFSQIKQLQANLITNGHFHFSSSRTK--LLELCAISPFGDLSHALHIFRHIHSP-STKD 71
SS ++++Q+ A I +G + K + L ++ +S+A +F I P +
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87
Query: 72 WNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARSEVMQFHSQ 131
WN +IRG A N +A YR M S G D T F +KA HS
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVS-GLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 147
Query: 132 VLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGRPSDA 191
V+R GF + + +Q +LL YA D+ A KVFD+MPE D+ +WNS+I GFA+ G+P +A
Sbjct: 148 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 207
Query: 192 IDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVVQVCNVVID 251
+ L+ M G ++P+ T+ LSAC+++G L G+ VH Y+ + L + NV++D
Sbjct: 208 LALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 267
Query: 252 MYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKL-GRSGIYPDA 311
+YA+CG V++A +F+ M +K+ ++W ++I+ A++G G +A++LF+ + G+ P
Sbjct: 268 LYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCE 327
Query: 312 ISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIVSS 371
I+++ +L AC+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 328 ITFVGILYACSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 387
Query: 372 MP--FPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRRWDD 431
PN+V+W+TLLGAC +GD +AE A +++++ GD+VLLSN+YA+ +RW D
Sbjct: 388 XXPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSD 447
Query: 432 VGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKAIGY 491
V ++R M R VKK PG S +EV +H+FL GD+SH IYAKL E+ R+++ GY
Sbjct: 448 VQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGY 507
Query: 492 TAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVVIKL 551
+ NV D+EEE+K N + YHSEK+A+AF L T E +PI V+KNLR+C DCH+ IKL
Sbjct: 508 VPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKL 567
Query: 552 ISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
+SK YNREI VRDR+RFH FK+G CSC+DYW
Sbjct: 568 VSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
BLAST of Carg15818 vs. Swiss-Prot
Match:
sp|Q9C6T2|PPR68_ARATH (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H11 PE=2 SV=1)
HSP 1 Score: 382.9 bits (982), Expect = 6.4e-105
Identity = 200/574 (34.84%), Postives = 329/574 (57.32%), Query Frame = 0
Query: 7 LLQKCSSFSQIKQLQANLITNGHFHFSS-SRTKLLELCAISPF-GDLSHALHIFRHIHSP 66
LL++C + + KQ+ A I F+ SS S + +L CA S + +++A IFR I P
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDP 95
Query: 67 STKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARSEVMQ 126
T D+N +IRG + A+ +Y M + + D T LKAC R + E Q
Sbjct: 96 CTFDFNTMIRGYVNVMSFEEALCFYNEM--MQRGNEPDNFTYPCLLKACTRLKSIREGKQ 155
Query: 127 FHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGR 186
H QV + G +ADV +Q +L++ Y + +++ + VF+++ ASW+S+++ A G
Sbjct: 156 IHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGM 215
Query: 187 PSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVVQVCN 246
S+ + LF+ M + NL+ + AL AC+ G L G ++H ++ + + V
Sbjct: 216 WSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQT 275
Query: 247 VVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGIY 306
++DMY KCG +DKA +F+ M +++ +T++ MI A+HG+G AL +F K+ + G+
Sbjct: 276 SLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLE 335
Query: 307 PDAISYLAVLCACNHAGLIEDGLK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 366
PD + Y++VL AC+H+GL+++G + E
Sbjct: 336 PDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALE 395
Query: 367 IVSSMPF-PNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRR 426
+ S+P N V+W+T L CR ++++ ++A+++L+++ + GD++L+SN+Y+ +
Sbjct: 396 TIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQM 455
Query: 427 WDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKA 486
WDDV R R + + +K+TPGFS +E+KG H+F+ DRSH C+EIY L ++ +++K
Sbjct: 456 WDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKF 515
Query: 487 IGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVV 546
GY+ + +L +++EE+K L HS+K+A+AFGL T G+ I++ +NLR+C DCH
Sbjct: 516 EGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTY 575
Query: 547 IKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
K IS Y REI VRDR RFH FK G CSCKDYW
Sbjct: 576 TKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
BLAST of Carg15818 vs. TrEMBL
Match:
tr|A0A0A0KB77|A0A0A0KB77_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052690 PE=4 SV=1)
HSP 1 Score: 964.1 bits (2491), Expect = 1.4e-277
Identity = 469/576 (81.42%), Postives = 506/576 (87.85%), Query Frame = 0
Query: 1 MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
MAYF+LLLQKCSSFSQIKQLQANLI NG FHFSSSRTKLLELCAIS FGDLS+ALHIFR+
Sbjct: 1 MAYFNLLLQKCSSFSQIKQLQANLIINGDFHFSSSRTKLLELCAISSFGDLSYALHIFRY 60
Query: 61 IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARS 120
I PST DWNAVIRGTALSS+P+NA+FWYR M AS G HR+DALTCSFALKACARALARS
Sbjct: 61 IPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKACARALARS 120
Query: 121 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
E +Q HSQ+LRFGF+ADVLLQTTLLDAYAK+ DLD AQK+FDEMP+PDIASWN+LIAGFA
Sbjct: 121 EAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFA 180
Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240
QG RP+DAI FKRMK DGNLRPNAVTVQGAL ACSQLG LKEGE+VHKYI EE L++ V
Sbjct: 181 QGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNSNV 240
Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
QVCNVVIDMYAKCGS+DKAYWVFENMRC+KSLITWNTMIMAFAMHGDGHKALDLFEKLGR
Sbjct: 241 QVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
SG+ PDA+SYLAVLCACNHAGL+EDGLK
Sbjct: 301 SGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQRGLEPNIKHYGSMVDLLGRAGRLKE 360
Query: 361 XXEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
+IVSS+PFPNMVLWQTLLGACRTYGDV+MAE+ASRKLVEMGFISCGDFVLLSNVYAAR
Sbjct: 361 AYDIVSSLPFPNMVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGDFVLLSNVYAAR 420
Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
+RWDDVGRVRDAMRRRDVKKTPGFSYIE+KG M+KF+ GD+SHSSCREIYAKLDEI RI
Sbjct: 421 QRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRI 480
Query: 481 KAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
KA GY+A+T NVLHDI +EDK N LCYHSEKLAVAFGL+CTEEGTPIQVIKNLRICGDCH
Sbjct: 481 KAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCH 540
Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
VVIKLISK Y REI VRDRTRFHRFK+GLCSCKDYW
Sbjct: 541 VVIKLISKIYIREIIVRDRTRFHRFKEGLCSCKDYW 576
BLAST of Carg15818 vs. TrEMBL
Match:
tr|A0A1S3C3U7|A0A1S3C3U7_CUCME (pentatricopeptide repeat-containing protein At1g34160 OS=Cucumis melo OX=3656 GN=LOC103496566 PE=4 SV=1)
HSP 1 Score: 951.0 bits (2457), Expect = 1.2e-273
Identity = 460/576 (79.86%), Postives = 501/576 (86.98%), Query Frame = 0
Query: 1 MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
MAYF+LLLQKCSSFS IKQLQANLI NG FHFSSSRTKLLELCA+S GDLS+ALHIFR+
Sbjct: 1 MAYFNLLLQKCSSFSHIKQLQANLIINGDFHFSSSRTKLLELCAVSSCGDLSYALHIFRY 60
Query: 61 IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARS 120
I PST DWNA+IRGTALSS+P+NA+ WYR M AS GPHR+DALTCSFALKACARALA S
Sbjct: 61 IRYPSTNDWNAIIRGTALSSDPANAVVWYRAMAASNGPHRIDALTCSFALKACARALACS 120
Query: 121 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
E +Q HSQ+LRFGF+ADVLLQTTLLD YAKV DLD AQK+FDEMP PDIASWN+LI+GFA
Sbjct: 121 EAIQLHSQLLRFGFNADVLLQTTLLDVYAKVGDLDLAQKLFDEMPRPDIASWNALISGFA 180
Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240
QG RP+DAI +FKRMKE GNLRPNAVTVQGAL ACSQLGTLKEGENVHKYI EE LD V
Sbjct: 181 QGSRPADAIMMFKRMKEGGNLRPNAVTVQGALLACSQLGTLKEGENVHKYIVEEKLDMNV 240
Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
QVCNVVIDMYAKCGS+DKAYWVFENMRC+KSLITWNTMIMAFAMHGDG++ALDLF+KLGR
Sbjct: 241 QVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGYEALDLFKKLGR 300
Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
SG+ PDA+SYLAVLCACNHAGL+EDGLK
Sbjct: 301 SGMSPDAVSYLAVLCACNHAGLVEDGLKLFNLMAQRGLEPNIKHYGSMVDLLGRAGRLKE 360
Query: 361 XXEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
+IV+S+PFPNMVLWQTLLGACRTYGDV+MAE+AS KLVEMGFISCGDFVLLSNVYAAR
Sbjct: 361 AYDIVNSLPFPNMVLWQTLLGACRTYGDVEMAELASGKLVEMGFISCGDFVLLSNVYAAR 420
Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
+RWDDVGRVRDAMR RDVKKTPGFSYIE+KG M++F+YGD+SHSSCREIYAKLDEI RI
Sbjct: 421 QRWDDVGRVRDAMRIRDVKKTPGFSYIEIKGKMYQFVYGDQSHSSCREIYAKLDEINLRI 480
Query: 481 KAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
KA GY+A+T NVLHDI +EDK N LCYHSEKLAVAFGL+CTEEG PIQVIKNLRICGDCH
Sbjct: 481 KAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGIPIQVIKNLRICGDCH 540
Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
VVIKLISK YNREI VRDRTRFHRFK+GLCSCKDYW
Sbjct: 541 VVIKLISKIYNREIIVRDRTRFHRFKEGLCSCKDYW 576
BLAST of Carg15818 vs. TrEMBL
Match:
tr|A0A2I4FME1|A0A2I4FME1_9ROSI (pentatricopeptide repeat-containing protein At1g34160 OS=Juglans regia OX=51240 GN=LOC109000395 PE=4 SV=1)
HSP 1 Score: 776.9 bits (2005), Expect = 3.1e-221
Identity = 391/577 (67.76%), Postives = 445/577 (77.12%), Query Frame = 0
Query: 1 MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
MA + L+QKC+S S +KQLQA+ IT F SSRTKLLELCA+SPFGDLS+A H+FRH
Sbjct: 1 MASLESLIQKCNSLSHVKQLQAHFITTSQLLFCSSRTKLLELCAVSPFGDLSYATHLFRH 60
Query: 61 IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARS 120
I +PST DWNAV+RG A P+ AI WYRTM S+ RVDALTCSFALKACARALARS
Sbjct: 61 IQNPSTNDWNAVVRGLAAGPEPTRAISWYRTM--SRQSCRVDALTCSFALKACARALARS 120
Query: 121 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
E MQ HSQV+R GF ADVLL TTLLDAYAK DLD A+KVFDEM DIASWN+LIAG A
Sbjct: 121 EAMQIHSQVVRLGFYADVLLMTTLLDAYAKSGDLDGAKKVFDEMVVRDIASWNALIAGLA 180
Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240
QG RPS+AI+LF M+ +G +P+ +TV GALSACSQLG LKEGE VH YI E LD V
Sbjct: 181 QGSRPSEAIELFNGMRVEG-WKPDEITVLGALSACSQLGALKEGEKVHSYIMGEKLDMNV 240
Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
QVCN VIDMYAKCG +KAY VF+NM C +SL+TWNTMIMAFAMHGDG+KAL+LFE++G+
Sbjct: 241 QVCNAVIDMYAKCGFANKAYTVFKNMCC-RSLVTWNTMIMAFAMHGDGYKALELFEQMGQ 300
Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
+G++PDA+SYL LCACNHAGL+ DG++
Sbjct: 301 AGVHPDAVSYLGALCACNHAGLVNDGVRLFDSMAGSGLTPNVKHYGSVVDLLGRAGRLKE 360
Query: 361 XXEIVSSMPF-PNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAA 420
+IVSSMP + VLWQTLLGAC+TYG+V+MAE+ASRKLVEMG SCGDFVLLSNVYAA
Sbjct: 361 AYDIVSSMPMKSDEVLWQTLLGACKTYGNVEMAEIASRKLVEMGSKSCGDFVLLSNVYAA 420
Query: 421 RRRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFR 480
RW DV RVR AM+ RDVKK PGFSYIEV G +HKF+ GD++H + REIYAKLDEI FR
Sbjct: 421 HERWKDVDRVRTAMKDRDVKKIPGFSYIEVDGVIHKFVNGDQNHFNWREIYAKLDEIKFR 480
Query: 481 IKAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDC 540
KA GY AET VLHDI +E+K N LCYHSEKLAVAFGL T EGTPIQVIKNLRICGDC
Sbjct: 481 TKAYGYVAETNYVLHDIGQEEKENALCYHSEKLAVAFGLISTAEGTPIQVIKNLRICGDC 540
Query: 541 HVVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
HVVIK+ISK YNREI VRDR RFHRF +GLCSCKDYW
Sbjct: 541 HVVIKIISKIYNREIVVRDRARFHRFTEGLCSCKDYW 573
BLAST of Carg15818 vs. TrEMBL
Match:
tr|M5VIA7|M5VIA7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G045500 PE=4 SV=1)
HSP 1 Score: 766.9 bits (1979), Expect = 3.2e-218
Identity = 418/578 (72.32%), Postives = 470/578 (81.31%), Query Frame = 0
Query: 1 MAYFDLLLQKCSSFSQIKQLQANLITNGHFHF-SSSRTKLLELCAISPFGDLSHALHIFR 60
MA + LLQKC+S ++IKQLQ++L+T+G F F S TKL+ELCA+SP DLSHA+ +F
Sbjct: 1 MANLESLLQKCTSLARIKQLQSHLLTSGKFQFYPSLTTKLIELCALSPIADLSHAITLFH 60
Query: 61 HIHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALAR 120
+ PST WNAV+RG A S P+ AI WY+TM SK +VDALTCSFALKACARALA
Sbjct: 61 QLRKPSTNQWNAVVRGLAQSLQPTQAISWYKTM--SKASQKVDALTCSFALKACARALAF 120
Query: 121 SEVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGF 180
SE MQ HSQ++RFGF DVLLQTTLLD YAKV DL AQKVFDEM E DIASWN+LIAG
Sbjct: 121 SEAMQIHSQIVRFGFGVDVLLQTTLLDVYAKVGDLGFAQKVFDEMSERDIASWNALIAGL 180
Query: 181 AQGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTV 240
AQG RP++AI LFKRM E+ L+PN VTV GALSACSQLG +K GE +H YI EE LD
Sbjct: 181 AQGSRPTEAIALFKRMSEEEGLKPNEVTVLGALSACSQLGGVKGGEKIHVYIMEEKLDMH 240
Query: 241 VQVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLG 300
V VCN VIDMYAKCG VDKAYWVF+NM+C K+LITWNTMIMAFAMHGDG KAL+LF ++
Sbjct: 241 VIVCNAVIDMYAKCGFVDKAYWVFKNMKCGKNLITWNTMIMAFAMHGDGGKALELFGEMA 300
Query: 301 RSGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
+SG+ PDA+SYLA LCACNHAGL+EDG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 KSGVCPDAVSYLAALCACNHAGLVEDGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
Query: 361 XXXEIVSSMP-FPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYA 420
XXX P F ++VLWQTLLGA +TYG+V+MAEMASRKLVEMG CGDFVLLSNVYA
Sbjct: 361 XXXXXXXXXPMFADVVLWQTLLGASKTYGNVEMAEMASRKLVEMGSKGCGDFVLLSNVYA 420
Query: 421 ARRRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMF 480
A RWDDVGRVR+AM+RRDVKK PGF YIEV G +HKF+ GD+SH REIYAKLDEIM
Sbjct: 421 AHERWDDVGRVREAMKRRDVKKIPGFGYIEVDGVIHKFVNGDQSHVKWREIYAKLDEIML 480
Query: 481 RIKAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGD 540
+KA GY A+T NVLHDI EE+K N L YH EKLAVAFGL T EGTPIQVIKNLRIC D
Sbjct: 481 SVKAYGYVAKTNNVLHDIGEEEKENALSYHCEKLAVAFGLISTSEGTPIQVIKNLRICDD 540
Query: 541 CHVVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
CH VIKLISK YNREI VRDR RFHRFK+G CSC+DYW
Sbjct: 541 CHAVIKLISKIYNREIIVRDRARFHRFKEGCCSCRDYW 576
BLAST of Carg15818 vs. TrEMBL
Match:
tr|A0A2P6PRK6|A0A2P6PRK6_ROSCH (Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0273501 PE=4 SV=1)
HSP 1 Score: 759.6 bits (1960), Expect = 5.1e-216
Identity = 400/578 (69.20%), Postives = 459/578 (79.41%), Query Frame = 0
Query: 1 MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRT-KLLELCAISPFGDLSHALHIFR 60
MA +LLLQKC S + IKQLQA+L+T G F S T KLLELCA+ P +L +A +F
Sbjct: 1 MAKLELLLQKCDSLTHIKQLQAHLLTIGRFQLYPSITIKLLELCALPPITNLPYATTLFH 60
Query: 61 HIHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALAR 120
+ SPST+ WNAV+RG A S P+ A+ WY TM S+ +VDALTCSFALKACARALA
Sbjct: 61 QLQSPSTRHWNAVVRGLAQSLQPTQAVTWYATM--SRSSQKVDALTCSFALKACARALAL 120
Query: 121 SEVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGF 180
SE MQ HSQ+LRFGF DVLL+TTLLD YAKV L AQKVFDEMPE DIA WN+L+AG
Sbjct: 121 SEAMQIHSQLLRFGFGRDVLLRTTLLDVYAKVGKLGFAQKVFDEMPERDIACWNALVAGL 180
Query: 181 AQGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTV 240
AQG +PS+A+ LF+RM E+ L+PN VTV GALSACSQLG L+ GE +H YI LDT
Sbjct: 181 AQGSQPSEALALFERMAEEEGLKPNEVTVLGALSACSQLGALRGGERIHTYIVNAKLDTH 240
Query: 241 VQVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLG 300
V VCN VIDMYAKCG VD+AY FENMRC K+LITWNTMIMAFAMHGDG KAL+LFEK+G
Sbjct: 241 VIVCNAVIDMYAKCGFVDRAYEAFENMRCGKNLITWNTMIMAFAMHGDGCKALELFEKMG 300
Query: 301 RSGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
++G+ PDA+SYLA LCACNHAGL+EDG+K XXXXXXXXXXXXXXXXXXXX
Sbjct: 301 KNGVCPDAVSYLAALCACNHAGLVEDGVKLXXXXXXXXXXXXXXXXXXXXDLLGRAGRLQ 360
Query: 361 XXXEIVSSMP-FPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYA 420
EIV SMP FP++VLWQTLLGA +TYG+V+MAEMASR LVE+G CGDFVLLSNVYA
Sbjct: 361 EAYEIVKSMPMFPDVVLWQTLLGASKTYGNVEMAEMASRNLVELGSEGCGDFVLLSNVYA 420
Query: 421 ARRRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMF 480
A RWDDVGRVR+AM+RRDVKK PGF YIEV+G +HKF+ GD++H + EIY+KLDEI
Sbjct: 421 AHNRWDDVGRVREAMKRRDVKKIPGFGYIEVEGVIHKFVNGDQNHVNSHEIYSKLDEIKC 480
Query: 481 RIKAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGD 540
RIKA GY A+T +VLHDI EEDK N L YH EKLAVAFGL T+EGTPIQVIKNLRIC D
Sbjct: 481 RIKAYGYVAKTNHVLHDIGEEDKENALSYHCEKLAVAFGLISTDEGTPIQVIKNLRICDD 540
Query: 541 CHVVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
CHVV+KLIS+ YNREI VRDR RFHRF+DGLCSC+DYW
Sbjct: 541 CHVVMKLISEIYNREIIVRDRARFHRFQDGLCSCRDYW 576
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022960919.1 | 0.0e+00 | 99.13 | pentatricopeptide repeat-containing protein At1g34160 [Cucurbita moschata] >XP_0... | [more] |
XP_022990287.1 | 0.0e+00 | 92.01 | pentatricopeptide repeat-containing protein At1g34160 isoform X1 [Cucurbita maxi... | [more] |
XP_023526446.1 | 0.0e+00 | 97.57 | pentatricopeptide repeat-containing protein At1g34160 isoform X1 [Cucurbita pepo... | [more] |
XP_004140941.1 | 2.1e-277 | 81.42 | PREDICTED: pentatricopeptide repeat-containing protein At1g34160 [Cucumis sativu... | [more] |
XP_008456696.1 | 1.8e-273 | 79.86 | PREDICTED: pentatricopeptide repeat-containing protein At1g34160 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
AT1G34160.1 | 6.1e-183 | 56.53 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G56550.1 | 1.3e-113 | 36.59 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G21065.1 | 2.0e-109 | 43.61 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G31920.1 | 3.5e-106 | 34.84 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G47530.1 | 1.9e-104 | 36.88 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |