Carg15818 (gene) Silver-seed gourd

NameCarg15818
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat
LocationCucurbita_argyrosperma_scaffold_055 : 539333 .. 541063 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTACTTCGATCTCCTGTTGCAGAAGTGCTCTTCCTTCTCGCAAATCAAGCAACTCCAAGCAAACCTCATCACCAATGGCCATTTTCACTTCTCTTCCTCTCGCACCAAGCTTCTCGAGCTCTGCGCCATCTCCCCCTTCGGCGACCTTTCTCATGCCCTCCATATTTTCCGCCATATCCACTCCCCTTCCACCAAGGATTGGAACGCCGTCATTCGCGGCACCGCCTTGAGCTCCAATCCCTCAAATGCCATTTTCTGGTACAGAACCATGACCGCGTCAAAAGGGCCTCATAGAGTCGACGCTCTCACCTGCTCCTTTGCCCTCAAAGCTTGTGCGCGTGCGTTGGCTCGTTCTGAAGTGATGCAATTTCATTCACAGGTTTTGCGATTTGGGTTCGATGCTGATGTTCTCCTACAGACTACATTGCTTGATGCGTACGCAAAAGTTGAGGATCTTGATCAGGCCCAGAAGGTGTTCGACGAAATGCCAGAACCAGATATCGCCTCATGGAATTCTCTGATTGCTGGGTTTGCCCAGGGGGGTCGACCAAGCGATGCTATAGACTTGTTTAAGAGAATGAAGGAGGATGGGAATTTGAGGCCCAATGCAGTAACCGTTCAAGGTGCTCTCTCGGCGTGTTCCCAATTGGGTACTTTGAAAGAAGGTGAGAATGTTCACAAATACATAGCAGAGGAGAATTTAGACACAGTTGTGCAGGTTTGTAATGTTGTTATTGACATGTATGCTAAATGTGGATCTGTGGATAAAGCTTATTGGGTGTTTGAGAATATGAGATGTGAGAAAAGCTTAATCACATGGAATACAATGATAATGGCATTTGCAATGCATGGTGATGGACACAAAGCGTTAGATCTTTTTGAAAAGTTGGGTCGATCTGGTATATATCCTGATGCAATATCATATCTAGCGGTGCTATGCGCCTGTAACCACGCAGGGCTCATAGAGGATGGACTTAAGCTCTTCAATTCAATGGTGCAAAGGGGTGTGGCGCCAAATATAAAGCATTATGGAGTAGTGGTCGATTTGTTGGGTCGAGCCGGGCGTCTGAAAGAAGCATATGAAATTGTAAGTTCAATGCCTTTTCCTAATATGGTTCTGTGGCAGACTTTGCTTGGTGCTTGCAGGACTTATGGGGATGTAAAAATGGCAGAGATGGCATCTAGGAAGCTAGTAGAGATGGGCTTTATTAGCTGTGGTGATTTTGTTCTGTTGTCGAACGTGTATGCTGCTCGTCGGAGATGGGATGACGTTGGGCGAGTTAGGGATGCCATGAGAAGAAGGGATGTGAAGAAGACGCCTGGATTTAGTTACATAGAAGTGAAAGGTAATATGCACAAATTTCTTTATGGTGATCGAAGCCATTCGAGTTGCCGTGAAATTTATGCAAAGCTTGATGAGATCATGTTTAGGATCAAAGCCATTGGATATACAGCTGAAACTGGTAATGTATTGCATGATATTGAGGAGGAGGACAAGGTGAACGTGCTGTGTTATCATAGTGAGAAGCTTGCTGTAGCCTTTGGATTATCTTGTACTGAAGAAGGGACCCCAATCCAAGTGATTAAGAATTTAAGGATTTGTGGCGATTGTCATGTTGTGATTAAGCTAATATCAAAGAGTTATAATCGAGAAATTTTCGTAAGGGACCGAACTCGATTTCACCGGTTTAAAGATGGTTTGTGTTCTTGCAAAGATTATTGGTGA

mRNA sequence

ATGGCCTACTTCGATCTCCTGTTGCAGAAGTGCTCTTCCTTCTCGCAAATCAAGCAACTCCAAGCAAACCTCATCACCAATGGCCATTTTCACTTCTCTTCCTCTCGCACCAAGCTTCTCGAGCTCTGCGCCATCTCCCCCTTCGGCGACCTTTCTCATGCCCTCCATATTTTCCGCCATATCCACTCCCCTTCCACCAAGGATTGGAACGCCGTCATTCGCGGCACCGCCTTGAGCTCCAATCCCTCAAATGCCATTTTCTGGTACAGAACCATGACCGCGTCAAAAGGGCCTCATAGAGTCGACGCTCTCACCTGCTCCTTTGCCCTCAAAGCTTGTGCGCGTGCGTTGGCTCGTTCTGAAGTGATGCAATTTCATTCACAGGTTTTGCGATTTGGGTTCGATGCTGATGTTCTCCTACAGACTACATTGCTTGATGCGTACGCAAAAGTTGAGGATCTTGATCAGGCCCAGAAGGTGTTCGACGAAATGCCAGAACCAGATATCGCCTCATGGAATTCTCTGATTGCTGGGTTTGCCCAGGGGGGTCGACCAAGCGATGCTATAGACTTGTTTAAGAGAATGAAGGAGGATGGGAATTTGAGGCCCAATGCAGTAACCGTTCAAGGTGCTCTCTCGGCGTGTTCCCAATTGGGTACTTTGAAAGAAGGTGAGAATGTTCACAAATACATAGCAGAGGAGAATTTAGACACAGTTGTGCAGGTTTGTAATGTTGTTATTGACATGTATGCTAAATGTGGATCTGTGGATAAAGCTTATTGGGTGTTTGAGAATATGAGATGTGAGAAAAGCTTAATCACATGGAATACAATGATAATGGCATTTGCAATGCATGGTGATGGACACAAAGCGTTAGATCTTTTTGAAAAGTTGGGTCGATCTGGTATATATCCTGATGCAATATCATATCTAGCGGTGCTATGCGCCTGTAACCACGCAGGGCTCATAGAGGATGGACTTAAGCTCTTCAATTCAATGGTGCAAAGGGGTGTGGCGCCAAATATAAAGCATTATGGAGTAGTGGTCGATTTGTTGGGTCGAGCCGGGCGTCTGAAAGAAGCATATGAAATTGTAAGTTCAATGCCTTTTCCTAATATGGTTCTGTGGCAGACTTTGCTTGGTGCTTGCAGGACTTATGGGGATGTAAAAATGGCAGAGATGGCATCTAGGAAGCTAGTAGAGATGGGCTTTATTAGCTGTGGTGATTTTGTTCTGTTGTCGAACGTGTATGCTGCTCGTCGGAGATGGGATGACGTTGGGCGAGTTAGGGATGCCATGAGAAGAAGGGATGTGAAGAAGACGCCTGGATTTAGTTACATAGAAGTGAAAGGTAATATGCACAAATTTCTTTATGGTGATCGAAGCCATTCGAGTTGCCGTGAAATTTATGCAAAGCTTGATGAGATCATGTTTAGGATCAAAGCCATTGGATATACAGCTGAAACTGGTAATGTATTGCATGATATTGAGGAGGAGGACAAGGTGAACGTGCTGTGTTATCATAGTGAGAAGCTTGCTGTAGCCTTTGGATTATCTTGTACTGAAGAAGGGACCCCAATCCAAGTGATTAAGAATTTAAGGATTTGTGGCGATTGTCATGTTGTGATTAAGCTAATATCAAAGAGTTATAATCGAGAAATTTTCGTAAGGGACCGAACTCGATTTCACCGGTTTAAAGATGGTTTGTGTTCTTGCAAAGATTATTGGTGA

Coding sequence (CDS)

ATGGCCTACTTCGATCTCCTGTTGCAGAAGTGCTCTTCCTTCTCGCAAATCAAGCAACTCCAAGCAAACCTCATCACCAATGGCCATTTTCACTTCTCTTCCTCTCGCACCAAGCTTCTCGAGCTCTGCGCCATCTCCCCCTTCGGCGACCTTTCTCATGCCCTCCATATTTTCCGCCATATCCACTCCCCTTCCACCAAGGATTGGAACGCCGTCATTCGCGGCACCGCCTTGAGCTCCAATCCCTCAAATGCCATTTTCTGGTACAGAACCATGACCGCGTCAAAAGGGCCTCATAGAGTCGACGCTCTCACCTGCTCCTTTGCCCTCAAAGCTTGTGCGCGTGCGTTGGCTCGTTCTGAAGTGATGCAATTTCATTCACAGGTTTTGCGATTTGGGTTCGATGCTGATGTTCTCCTACAGACTACATTGCTTGATGCGTACGCAAAAGTTGAGGATCTTGATCAGGCCCAGAAGGTGTTCGACGAAATGCCAGAACCAGATATCGCCTCATGGAATTCTCTGATTGCTGGGTTTGCCCAGGGGGGTCGACCAAGCGATGCTATAGACTTGTTTAAGAGAATGAAGGAGGATGGGAATTTGAGGCCCAATGCAGTAACCGTTCAAGGTGCTCTCTCGGCGTGTTCCCAATTGGGTACTTTGAAAGAAGGTGAGAATGTTCACAAATACATAGCAGAGGAGAATTTAGACACAGTTGTGCAGGTTTGTAATGTTGTTATTGACATGTATGCTAAATGTGGATCTGTGGATAAAGCTTATTGGGTGTTTGAGAATATGAGATGTGAGAAAAGCTTAATCACATGGAATACAATGATAATGGCATTTGCAATGCATGGTGATGGACACAAAGCGTTAGATCTTTTTGAAAAGTTGGGTCGATCTGGTATATATCCTGATGCAATATCATATCTAGCGGTGCTATGCGCCTGTAACCACGCAGGGCTCATAGAGGATGGACTTAAGCTCTTCAATTCAATGGTGCAAAGGGGTGTGGCGCCAAATATAAAGCATTATGGAGTAGTGGTCGATTTGTTGGGTCGAGCCGGGCGTCTGAAAGAAGCATATGAAATTGTAAGTTCAATGCCTTTTCCTAATATGGTTCTGTGGCAGACTTTGCTTGGTGCTTGCAGGACTTATGGGGATGTAAAAATGGCAGAGATGGCATCTAGGAAGCTAGTAGAGATGGGCTTTATTAGCTGTGGTGATTTTGTTCTGTTGTCGAACGTGTATGCTGCTCGTCGGAGATGGGATGACGTTGGGCGAGTTAGGGATGCCATGAGAAGAAGGGATGTGAAGAAGACGCCTGGATTTAGTTACATAGAAGTGAAAGGTAATATGCACAAATTTCTTTATGGTGATCGAAGCCATTCGAGTTGCCGTGAAATTTATGCAAAGCTTGATGAGATCATGTTTAGGATCAAAGCCATTGGATATACAGCTGAAACTGGTAATGTATTGCATGATATTGAGGAGGAGGACAAGGTGAACGTGCTGTGTTATCATAGTGAGAAGCTTGCTGTAGCCTTTGGATTATCTTGTACTGAAGAAGGGACCCCAATCCAAGTGATTAAGAATTTAAGGATTTGTGGCGATTGTCATGTTGTGATTAAGCTAATATCAAAGAGTTATAATCGAGAAATTTTCGTAAGGGACCGAACTCGATTTCACCGGTTTAAAGATGGTTTGTGTTCTTGCAAAGATTATTGGTGA

Protein sequence

MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRHIHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARSEVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVVQVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGIYPDAISYLAVLCACNHAGLIEDGLKLFNSMVQRGVAPNIKHYGVVVDLLGRAGRLKEAYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW
BLAST of Carg15818 vs. NCBI nr
Match: XP_022960919.1 (pentatricopeptide repeat-containing protein At1g34160 [Cucurbita moschata] >XP_022960927.1 pentatricopeptide repeat-containing protein At1g34160 [Cucurbita moschata])

HSP 1 Score: 1090.9 bits (2820), Expect = 0.0e+00
Identity = 571/576 (99.13%), Postives = 571/576 (99.13%), Query Frame = 0

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
           MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH
Sbjct: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60

Query: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARS 120
           IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTAS GPHRVDALTCSFALKACARALARS
Sbjct: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS 120

Query: 121 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
           EVMQ HSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA
Sbjct: 121 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180

Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240
           QGGRPSDAIDLFKRMKEDGNLRPN VTVQGALSACSQLGTLKEGENV KYIAEENLDTVV
Sbjct: 181 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVRKYIAEENLDTVV 240

Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
           QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR
Sbjct: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300

Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
           XXEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR
Sbjct: 361 XXEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420

Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
           RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI
Sbjct: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480

Query: 481 KAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
           KAIGYTAETGNVLHDIEEEDK NVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH
Sbjct: 481 KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540

Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW
Sbjct: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 576

BLAST of Carg15818 vs. NCBI nr
Match: XP_022990287.1 (pentatricopeptide repeat-containing protein At1g34160 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1079.7 bits (2791), Expect = 0.0e+00
Identity = 530/576 (92.01%), Postives = 534/576 (92.71%), Query Frame = 0

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
           MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH
Sbjct: 23  MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 82

Query: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARS 120
           +HSPSTKDWNAVIRGTALSSNPSNA+FWYRTM AS GPHRVDALTCSFALKACARALARS
Sbjct: 83  VHSPSTKDWNAVIRGTALSSNPSNALFWYRTMNASNGPHRVDALTCSFALKACARALARS 142

Query: 121 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
           EVMQ HSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA
Sbjct: 143 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 202

Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240
           QGGRPSDAIDLFKRMKEDGNLRPN VTVQGALSACSQLGTLKEGENVHKYI EENLDT+V
Sbjct: 203 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVHKYIVEENLDTIV 262

Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
           QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDG+KALDLFEKLGR
Sbjct: 263 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGYKALDLFEKLGR 322

Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           SGI PDAISYLAVLCACNHAGLIEDGLK                                
Sbjct: 323 SGICPDAISYLAVLCACNHAGLIEDGLKLCNSMMQRGVAPNIKHYGVVVDLLGRAGRLKE 382

Query: 361 XXEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
             EIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR
Sbjct: 383 AYEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 442

Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
           RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI
Sbjct: 443 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 502

Query: 481 KAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
           KAIGYTAETGNVLHDIEEEDK NVLC HSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH
Sbjct: 503 KAIGYTAETGNVLHDIEEEDKENVLCCHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 562

Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW
Sbjct: 563 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 598

BLAST of Carg15818 vs. NCBI nr
Match: XP_023526446.1 (pentatricopeptide repeat-containing protein At1g34160 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1075.1 bits (2779), Expect = 0.0e+00
Identity = 562/576 (97.57%), Postives = 564/576 (97.92%), Query Frame = 0

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
           MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALH+FRH
Sbjct: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHVFRH 60

Query: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARS 120
           IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTAS GPHRVDALTCSFALKACARALARS
Sbjct: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASNGPHRVDALTCSFALKACARALARS 120

Query: 121 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
           EVMQ HSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA
Sbjct: 121 EVMQLHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180

Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240
           QGGRPSDAIDLFKRMKEDGNLRPN VTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV
Sbjct: 181 QGGRPSDAIDLFKRMKEDGNLRPNEVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240

Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
           QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR
Sbjct: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300

Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           SGIYPDAISYLAVLCACNHAGLIE+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 SGIYPDAISYLAVLCACNHAGLIEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
           XX     MPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR
Sbjct: 361 XXXXXXXMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420

Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
           RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI
Sbjct: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480

Query: 481 KAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
           KAIGYTAETGNVLHDIEEEDK NVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH
Sbjct: 481 KAIGYTAETGNVLHDIEEEDKENVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540

Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW
Sbjct: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 576

BLAST of Carg15818 vs. NCBI nr
Match: XP_004140941.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g34160 [Cucumis sativus] >KGN46094.1 hypothetical protein Csa_6G052690 [Cucumis sativus])

HSP 1 Score: 964.1 bits (2491), Expect = 2.1e-277
Identity = 469/576 (81.42%), Postives = 506/576 (87.85%), Query Frame = 0

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
           MAYF+LLLQKCSSFSQIKQLQANLI NG FHFSSSRTKLLELCAIS FGDLS+ALHIFR+
Sbjct: 1   MAYFNLLLQKCSSFSQIKQLQANLIINGDFHFSSSRTKLLELCAISSFGDLSYALHIFRY 60

Query: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARS 120
           I  PST DWNAVIRGTALSS+P+NA+FWYR M AS G HR+DALTCSFALKACARALARS
Sbjct: 61  IPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKACARALARS 120

Query: 121 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
           E +Q HSQ+LRFGF+ADVLLQTTLLDAYAK+ DLD AQK+FDEMP+PDIASWN+LIAGFA
Sbjct: 121 EAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFA 180

Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240
           QG RP+DAI  FKRMK DGNLRPNAVTVQGAL ACSQLG LKEGE+VHKYI EE L++ V
Sbjct: 181 QGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNSNV 240

Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
           QVCNVVIDMYAKCGS+DKAYWVFENMRC+KSLITWNTMIMAFAMHGDGHKALDLFEKLGR
Sbjct: 241 QVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300

Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           SG+ PDA+SYLAVLCACNHAGL+EDGLK                                
Sbjct: 301 SGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQRGLEPNIKHYGSMVDLLGRAGRLKE 360

Query: 361 XXEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
             +IVSS+PFPNMVLWQTLLGACRTYGDV+MAE+ASRKLVEMGFISCGDFVLLSNVYAAR
Sbjct: 361 AYDIVSSLPFPNMVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGDFVLLSNVYAAR 420

Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
           +RWDDVGRVRDAMRRRDVKKTPGFSYIE+KG M+KF+ GD+SHSSCREIYAKLDEI  RI
Sbjct: 421 QRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRI 480

Query: 481 KAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
           KA GY+A+T NVLHDI +EDK N LCYHSEKLAVAFGL+CTEEGTPIQVIKNLRICGDCH
Sbjct: 481 KAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCH 540

Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           VVIKLISK Y REI VRDRTRFHRFK+GLCSCKDYW
Sbjct: 541 VVIKLISKIYIREIIVRDRTRFHRFKEGLCSCKDYW 576

BLAST of Carg15818 vs. NCBI nr
Match: XP_008456696.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g34160 [Cucumis melo])

HSP 1 Score: 951.0 bits (2457), Expect = 1.8e-273
Identity = 460/576 (79.86%), Postives = 501/576 (86.98%), Query Frame = 0

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
           MAYF+LLLQKCSSFS IKQLQANLI NG FHFSSSRTKLLELCA+S  GDLS+ALHIFR+
Sbjct: 1   MAYFNLLLQKCSSFSHIKQLQANLIINGDFHFSSSRTKLLELCAVSSCGDLSYALHIFRY 60

Query: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARS 120
           I  PST DWNA+IRGTALSS+P+NA+ WYR M AS GPHR+DALTCSFALKACARALA S
Sbjct: 61  IRYPSTNDWNAIIRGTALSSDPANAVVWYRAMAASNGPHRIDALTCSFALKACARALACS 120

Query: 121 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
           E +Q HSQ+LRFGF+ADVLLQTTLLD YAKV DLD AQK+FDEMP PDIASWN+LI+GFA
Sbjct: 121 EAIQLHSQLLRFGFNADVLLQTTLLDVYAKVGDLDLAQKLFDEMPRPDIASWNALISGFA 180

Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240
           QG RP+DAI +FKRMKE GNLRPNAVTVQGAL ACSQLGTLKEGENVHKYI EE LD  V
Sbjct: 181 QGSRPADAIMMFKRMKEGGNLRPNAVTVQGALLACSQLGTLKEGENVHKYIVEEKLDMNV 240

Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
           QVCNVVIDMYAKCGS+DKAYWVFENMRC+KSLITWNTMIMAFAMHGDG++ALDLF+KLGR
Sbjct: 241 QVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGYEALDLFKKLGR 300

Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           SG+ PDA+SYLAVLCACNHAGL+EDGLK                                
Sbjct: 301 SGMSPDAVSYLAVLCACNHAGLVEDGLKLFNLMAQRGLEPNIKHYGSMVDLLGRAGRLKE 360

Query: 361 XXEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
             +IV+S+PFPNMVLWQTLLGACRTYGDV+MAE+AS KLVEMGFISCGDFVLLSNVYAAR
Sbjct: 361 AYDIVNSLPFPNMVLWQTLLGACRTYGDVEMAELASGKLVEMGFISCGDFVLLSNVYAAR 420

Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
           +RWDDVGRVRDAMR RDVKKTPGFSYIE+KG M++F+YGD+SHSSCREIYAKLDEI  RI
Sbjct: 421 QRWDDVGRVRDAMRIRDVKKTPGFSYIEIKGKMYQFVYGDQSHSSCREIYAKLDEINLRI 480

Query: 481 KAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
           KA GY+A+T NVLHDI +EDK N LCYHSEKLAVAFGL+CTEEG PIQVIKNLRICGDCH
Sbjct: 481 KAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGIPIQVIKNLRICGDCH 540

Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           VVIKLISK YNREI VRDRTRFHRFK+GLCSCKDYW
Sbjct: 541 VVIKLISKIYNREIIVRDRTRFHRFKEGLCSCKDYW 576

BLAST of Carg15818 vs. TAIR10
Match: AT1G34160.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 637.9 bits (1644), Expect = 6.1e-183
Identity = 329/582 (56.53%), Postives = 401/582 (68.90%), Query Frame = 0

Query: 3   YFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRHIH 62
           Y + ++QKC SFSQIKQLQ++ +T GHF  S  R++LLE CAISPFGDLS A+ IFR+I 
Sbjct: 5   YMETMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIP 64

Query: 63  SPSTKDWNAVIRGTALSSNPSNAIFWYRTM----TASKGPHRVDALTCSFALKACARALA 122
            P T DWNA+IRG A SS+PS A  WYR+M    ++S    RVDALTCSF LKACARAL 
Sbjct: 65  KPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALC 124

Query: 123 RSEVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAG 182
            S + Q H Q+ R G  AD LL TTLLDAY+K  DL  A K+FDEMP  D+ASWN+LIAG
Sbjct: 125 SSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAG 184

Query: 183 FAQGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDT 242
              G R S+A++L+KRM+ +G +R + VTV  AL ACS LG +KEGEN+    + +N   
Sbjct: 185 LVSGNRASEAMELYKRMETEG-IRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN--- 244

Query: 243 VVQVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKL 302
            V V N  IDMY+KCG VDKAY VFE    +KS++TWNTMI  FA+HG+ H+AL++F+KL
Sbjct: 245 -VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKL 304

Query: 303 GRSGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 362
             +GI PD +SYLA L AC HAGL+E GL                               
Sbjct: 305 EDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRL 364

Query: 363 XXXXEIVSSMP-FPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVY 422
               +I+ SM   P+ VLWQ+LLGA   Y DV+MAE+ASR++ EMG  + GDFVLLSNVY
Sbjct: 365 REAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVY 424

Query: 423 AARRRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIM 482
           AA+ RW DVGRVRD M  + VKK PG SYIE KG +H+F   D+SH   REIY K+DEI 
Sbjct: 425 AAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIR 484

Query: 483 FRIKAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSC---TEEGTPIQVIKNLR 542
           F+I+  GY A+TG VLHDI EE+K N LCYHSEKLAVA+GL      +E +P++VI NLR
Sbjct: 485 FKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLR 544

Query: 543 ICGDCHVVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           ICGDCHVV K ISK Y REI VRDR RFHRFKDG CSC+D+W
Sbjct: 545 ICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581

BLAST of Carg15818 vs. TAIR10
Match: AT3G56550.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 407.5 bits (1046), Expect = 1.3e-113
Identity = 210/574 (36.59%), Postives = 334/574 (58.19%), Query Frame = 0

Query: 7   LLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRHIHS-PS 66
           +LQ C+S  +++++ +++I NG  H  S    LL  CA+S  G LSHA  +F H  S PS
Sbjct: 11  MLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPS 70

Query: 67  TKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARSEVMQF 126
           T DWN +IRG + SS+P N+I +Y  M  S    R D  T +FALK+C R  +  + ++ 
Sbjct: 71  TSDWNYLIRGFSNSSSPLNSILFYNRMLLS-SVSRPDLFTFNFALKSCERIKSIPKCLEI 130

Query: 127 HSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGRP 186
           H  V+R GF  D ++ T+L+  Y+    ++ A KVFDEMP  D+ SWN +I  F+  G  
Sbjct: 131 HGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLH 190

Query: 187 SDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVVQVCNV 246
           + A+ ++KRM  +G +  ++ T+   LS+C+ +  L  G  +H+   +   ++ V V N 
Sbjct: 191 NQALSMYKRMGNEG-VCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNA 250

Query: 247 VIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGIYP 306
           +IDMYAKCGS++ A  VF  MR ++ ++TWN+MI+ + +HG G +A+  F K+  SG+ P
Sbjct: 251 LIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRP 310

Query: 307 DAISYLAVLCACNHAGLIEDGLK--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 366
           +AI++L +L  C+H GL+++G++                                     
Sbjct: 311 NAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEM 370

Query: 367 IVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRRW 426
           I +S    + VLW+TLLG+C+ + ++++ E+A +KLV++   + GD+VL++++Y+A    
Sbjct: 371 IYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDA 430

Query: 427 DDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKAI 486
                +R  +R  D++  PG+S+IE+   +HKF+  D+ H     IY++L E++ R    
Sbjct: 431 QAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILA 490

Query: 487 GYTAETGN-VLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVV 546
           GY  E  N     + +    +    HSEKLA+A+GL  T  GT +++ KNLR+C DCH  
Sbjct: 491 GYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSF 550

Query: 547 IKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
            K +SK++NREI VRDR RFH F DG+CSC DYW
Sbjct: 551 TKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581

BLAST of Carg15818 vs. TAIR10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 393.7 bits (1010), Expect = 2.0e-109
Identity = 249/571 (43.61%), Postives = 358/571 (62.70%), Query Frame = 0

Query: 12  SSFSQIKQLQANLITNGHFHFSSSRTK--LLELCAISPFGDLSHALHIFRHIHSP-STKD 71
           SS ++++Q+ A  I +G     +   K  +  L ++     +S+A  +F  I  P +   
Sbjct: 28  SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87

Query: 72  WNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARSEVMQFHSQ 131
           WN +IRG A   N  +A   YR M  S G    D  T  F +KA             HS 
Sbjct: 88  WNTLIRGYAEIGNSISAFSLYREMRVS-GLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 147

Query: 132 VLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGRPSDA 191
           V+R GF + + +Q +LL  YA   D+  A KVFD+MPE D+ +WNS+I GFA+ G+P +A
Sbjct: 148 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 207

Query: 192 IDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVVQVCNVVID 251
           + L+  M   G ++P+  T+   LSAC+++G L  G+ VH Y+ +  L   +   NV++D
Sbjct: 208 LALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 267

Query: 252 MYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKL-GRSGIYPDA 311
           +YA+CG V++A  +F+ M  +K+ ++W ++I+  A++G G +A++LF+ +    G+ P  
Sbjct: 268 LYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCE 327

Query: 312 ISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIVSS 371
           I+++ +L AC+          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 328 ITFVGILYACSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 387

Query: 372 MP--FPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRRWDD 431
                PN+V+W+TLLGAC  +GD  +AE A  +++++     GD+VLLSN+YA+ +RW D
Sbjct: 388 XXPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSD 447

Query: 432 VGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKAIGY 491
           V ++R  M R  VKK PG S +EV   +H+FL GD+SH     IYAKL E+  R+++ GY
Sbjct: 448 VQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGY 507

Query: 492 TAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVVIKL 551
             +  NV  D+EEE+K N + YHSEK+A+AF L  T E +PI V+KNLR+C DCH+ IKL
Sbjct: 508 VPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKL 567

Query: 552 ISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           +SK YNREI VRDR+RFH FK+G CSC+DYW
Sbjct: 568 VSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

BLAST of Carg15818 vs. TAIR10
Match: AT1G31920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 382.9 bits (982), Expect = 3.5e-106
Identity = 200/574 (34.84%), Postives = 329/574 (57.32%), Query Frame = 0

Query: 7   LLQKCSSFSQIKQLQANLITNGHFHFSS-SRTKLLELCAISPF-GDLSHALHIFRHIHSP 66
           LL++C +  + KQ+ A  I    F+ SS S + +L  CA S +   +++A  IFR I  P
Sbjct: 36  LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDP 95

Query: 67  STKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARSEVMQ 126
            T D+N +IRG     +   A+ +Y  M   +  +  D  T    LKAC R  +  E  Q
Sbjct: 96  CTFDFNTMIRGYVNVMSFEEALCFYNEM--MQRGNEPDNFTYPCLLKACTRLKSIREGKQ 155

Query: 127 FHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGR 186
            H QV + G +ADV +Q +L++ Y +  +++ +  VF+++     ASW+S+++  A  G 
Sbjct: 156 IHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGM 215

Query: 187 PSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVVQVCN 246
            S+ + LF+ M  + NL+     +  AL AC+  G L  G ++H ++     +  + V  
Sbjct: 216 WSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQT 275

Query: 247 VVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGIY 306
            ++DMY KCG +DKA  +F+ M  +++ +T++ MI   A+HG+G  AL +F K+ + G+ 
Sbjct: 276 SLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLE 335

Query: 307 PDAISYLAVLCACNHAGLIEDGLK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 366
           PD + Y++VL AC+H+GL+++G +                                   E
Sbjct: 336 PDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALE 395

Query: 367 IVSSMPF-PNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRR 426
            + S+P   N V+W+T L  CR   ++++ ++A+++L+++   + GD++L+SN+Y+  + 
Sbjct: 396 TIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQM 455

Query: 427 WDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKA 486
           WDDV R R  +  + +K+TPGFS +E+KG  H+F+  DRSH  C+EIY  L ++ +++K 
Sbjct: 456 WDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKF 515

Query: 487 IGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVV 546
            GY+ +   +L +++EE+K   L  HS+K+A+AFGL  T  G+ I++ +NLR+C DCH  
Sbjct: 516 EGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTY 575

Query: 547 IKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
            K IS  Y REI VRDR RFH FK G CSCKDYW
Sbjct: 576 TKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606

BLAST of Carg15818 vs. TAIR10
Match: AT3G47530.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 377.1 bits (967), Expect = 1.9e-104
Identity = 208/564 (36.88%), Postives = 314/564 (55.67%), Query Frame = 0

Query: 20  LQANLITNGH-FHFSSSRTKLLELCAISPFGDLSHALHIFRHIHSPSTKDWNAVIRGTAL 79
           L+ +LI N   FH   SR  L    ++ P  D++++  +F    +P+    N +IR  +L
Sbjct: 35  LRTSLIRNSDVFHHFLSRLAL----SLIP-RDINYSCRVFSQRLNPTLSHCNTMIRAFSL 94

Query: 80  SSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARSEVMQFHSQVLRFGFDADV 139
           S  P      +R++  +      + L+ SFALK C ++      +Q H ++   GF +D 
Sbjct: 95  SQTPCEGFRLFRSLRRNSS-LPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDS 154

Query: 140 LLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGRPSDAIDLFKRMKE- 199
           LL TTL+D Y+  E+   A KVFDE+P+ D  SWN L + + +  R  D + LF +MK  
Sbjct: 155 LLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKND 214

Query: 200 -DGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVVQVCNVVIDMYAKCGSV 259
            DG ++P+ VT   AL AC+ LG L  G+ VH +I E  L   + + N ++ MY++CGS+
Sbjct: 215 VDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSM 274

Query: 260 DKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGIYPDAISYLAVLCA 319
           DKAY VF  MR E+++++W  +I   AM+G G +A++ F ++ + GI P+  +   +L A
Sbjct: 275 DKAYQVFYGMR-ERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSA 334

Query: 320 CNHAGLIEDGLK--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIVSSMPF-PNM 379
           C+H+GL+ +G+                                      ++ SM   P+ 
Sbjct: 335 CSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDS 394

Query: 380 VLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRRWDDVGRVRDAM 439
            +W+TLLGACR +GDV++ E     L+E+     GD+VLL N Y+   +W+ V  +R  M
Sbjct: 395 TIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLM 454

Query: 440 RRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKAIGYTAETGNVL 499
           + + +   PG S IE++G +H+F+  D SH    EIY  L EI  ++K  GY AE  + L
Sbjct: 455 KEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSEL 514

Query: 500 HDIE-EEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVVIKLISKSYNR 559
           H++E EE+K   L YHSEKLA+AFG+  T  GT I+V KNLR C DCH   K +S  Y+R
Sbjct: 515 HNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDR 574

Query: 560 EIFVRDRTRFHRFKDGLCSCKDYW 577
            + VRDR+RFH FK G CSC D+W
Sbjct: 575 IVIVRDRSRFHHFKGGSCSCNDFW 591

BLAST of Carg15818 vs. Swiss-Prot
Match: sp|Q9FX24|PPR71_ARATH (Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H68 PE=2 SV=2)

HSP 1 Score: 637.9 bits (1644), Expect = 1.1e-181
Identity = 329/582 (56.53%), Postives = 401/582 (68.90%), Query Frame = 0

Query: 3   YFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRHIH 62
           Y + ++QKC SFSQIKQLQ++ +T GHF  S  R++LLE CAISPFGDLS A+ IFR+I 
Sbjct: 5   YMETMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIP 64

Query: 63  SPSTKDWNAVIRGTALSSNPSNAIFWYRTM----TASKGPHRVDALTCSFALKACARALA 122
            P T DWNA+IRG A SS+PS A  WYR+M    ++S    RVDALTCSF LKACARAL 
Sbjct: 65  KPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALC 124

Query: 123 RSEVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAG 182
            S + Q H Q+ R G  AD LL TTLLDAY+K  DL  A K+FDEMP  D+ASWN+LIAG
Sbjct: 125 SSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAG 184

Query: 183 FAQGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDT 242
              G R S+A++L+KRM+ +G +R + VTV  AL ACS LG +KEGEN+    + +N   
Sbjct: 185 LVSGNRASEAMELYKRMETEG-IRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN--- 244

Query: 243 VVQVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKL 302
            V V N  IDMY+KCG VDKAY VFE    +KS++TWNTMI  FA+HG+ H+AL++F+KL
Sbjct: 245 -VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKL 304

Query: 303 GRSGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 362
             +GI PD +SYLA L AC HAGL+E GL                               
Sbjct: 305 EDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRL 364

Query: 363 XXXXEIVSSMP-FPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVY 422
               +I+ SM   P+ VLWQ+LLGA   Y DV+MAE+ASR++ EMG  + GDFVLLSNVY
Sbjct: 365 REAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVY 424

Query: 423 AARRRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIM 482
           AA+ RW DVGRVRD M  + VKK PG SYIE KG +H+F   D+SH   REIY K+DEI 
Sbjct: 425 AAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIR 484

Query: 483 FRIKAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSC---TEEGTPIQVIKNLR 542
           F+I+  GY A+TG VLHDI EE+K N LCYHSEKLAVA+GL      +E +P++VI NLR
Sbjct: 485 FKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLR 544

Query: 543 ICGDCHVVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           ICGDCHVV K ISK Y REI VRDR RFHRFKDG CSC+D+W
Sbjct: 545 ICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581

BLAST of Carg15818 vs. Swiss-Prot
Match: sp|B8YEK4|OGR1_ORYSJ (Pentatricopeptide repeat-containing protein OGR1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=OGR1 PE=2 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 1.2e-148
Identity = 282/583 (48.37%), Postives = 371/583 (63.64%), Query Frame = 0

Query: 3   YFDLLLQKCSSFSQIKQLQANLITNGHF-HFSSSRTKLLELCAISPF-GDLSHALHIFRH 62
           + + LL + +S     Q  A L+T+GH       R + L+  A+SP    L HAL + R 
Sbjct: 9   HLESLLPRLASLRHYLQFHARLLTSGHLGAHPGLRARFLDRLALSPHPAALPHALLLLRS 68

Query: 63  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARS 122
           + +P+T D NA +RG A S +P+ ++             R DAL+ SFALKA AR     
Sbjct: 69  LPTPATNDLNAALRGLAASPHPARSLLLLAGRLLPALLPRPDALSLSFALKASARCSDAH 128

Query: 123 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 182
             +Q H+ VLR G  ADV L TTLLD+YAK  DL  A+KVFDEM   D+A+WNSL+AG A
Sbjct: 129 TTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVFDEMTVRDVATWNSLLAGLA 188

Query: 183 QGGRPSDAIDLFKRMKED-----GNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEEN 242
           QG  P+ A+ LF R+            PN VT+  ALSAC+Q+G LK+G  VH++     
Sbjct: 189 QGTEPNLALALFHRLANSFQELPSREEPNEVTIVAALSACAQIGLLKDGMYVHEFAKRFG 248

Query: 243 LDTVVQVCNVVIDMYAKCGSVDKAYWVFENMRCE-KSLITWNTMIMAFAMHGDGHKALDL 302
           LD  V+VCN +IDMY+KCGS+ +A  VF +++ E ++L+++N  I A +MHG G  AL L
Sbjct: 249 LDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQAHSMHGHGGDALRL 308

Query: 303 FEKLGRSGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXX 362
           F+++  + I PD ++YLAVLC CNH+GL++DGL+                          
Sbjct: 309 FDEM-PTRIEPDGVTYLAVLCGCNHSGLVDDGLR---VFNSMRVAPNMKHYGTIVDLLGR 368

Query: 363 XXXXXXXXEIVSSMPFP-NMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLL 422
                   + V SMPFP ++VLWQTLLGA + +G V++AE+A+ KL E+G    GD+VLL
Sbjct: 369 AGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDYVLL 428

Query: 423 SNVYAARRRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKL 482
           SNVYA++ RW DVGRVRD MR  DV+K PGFSY E+ G MHKF+ GD+ H   +EIY  L
Sbjct: 429 SNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEIDGVMHKFINGDKEHPRWQEIYRAL 488

Query: 483 DEIMFRIKAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNL 542
           ++I+ RI  +GY  ET NVLHDI EE+K   LCYHSEKLA+AFGL  T  G  ++VIKNL
Sbjct: 489 EDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKNL 548

Query: 543 RICGDCHVVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           RICGDCHVV KLISK+Y R I +RDR RFHRF+DG CSC+DYW
Sbjct: 549 RICGDCHVVAKLISKAYGRVIVIRDRARFHRFEDGQCSCRDYW 587

BLAST of Carg15818 vs. Swiss-Prot
Match: sp|Q9LXY5|PP284_ARATH (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H80 PE=2 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 2.4e-112
Identity = 210/574 (36.59%), Postives = 334/574 (58.19%), Query Frame = 0

Query: 7   LLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRHIHS-PS 66
           +LQ C+S  +++++ +++I NG  H  S    LL  CA+S  G LSHA  +F H  S PS
Sbjct: 11  MLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPS 70

Query: 67  TKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARSEVMQF 126
           T DWN +IRG + SS+P N+I +Y  M  S    R D  T +FALK+C R  +  + ++ 
Sbjct: 71  TSDWNYLIRGFSNSSSPLNSILFYNRMLLS-SVSRPDLFTFNFALKSCERIKSIPKCLEI 130

Query: 127 HSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGRP 186
           H  V+R GF  D ++ T+L+  Y+    ++ A KVFDEMP  D+ SWN +I  F+  G  
Sbjct: 131 HGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLH 190

Query: 187 SDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVVQVCNV 246
           + A+ ++KRM  +G +  ++ T+   LS+C+ +  L  G  +H+   +   ++ V V N 
Sbjct: 191 NQALSMYKRMGNEG-VCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNA 250

Query: 247 VIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGIYP 306
           +IDMYAKCGS++ A  VF  MR ++ ++TWN+MI+ + +HG G +A+  F K+  SG+ P
Sbjct: 251 LIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRP 310

Query: 307 DAISYLAVLCACNHAGLIEDGLK--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 366
           +AI++L +L  C+H GL+++G++                                     
Sbjct: 311 NAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEM 370

Query: 367 IVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRRW 426
           I +S    + VLW+TLLG+C+ + ++++ E+A +KLV++   + GD+VL++++Y+A    
Sbjct: 371 IYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDA 430

Query: 427 DDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKAI 486
                +R  +R  D++  PG+S+IE+   +HKF+  D+ H     IY++L E++ R    
Sbjct: 431 QAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILA 490

Query: 487 GYTAETGN-VLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVV 546
           GY  E  N     + +    +    HSEKLA+A+GL  T  GT +++ KNLR+C DCH  
Sbjct: 491 GYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSF 550

Query: 547 IKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
            K +SK++NREI VRDR RFH F DG+CSC DYW
Sbjct: 551 TKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581

BLAST of Carg15818 vs. Swiss-Prot
Match: sp|A8MQA3|PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 393.7 bits (1010), Expect = 3.6e-108
Identity = 249/571 (43.61%), Postives = 358/571 (62.70%), Query Frame = 0

Query: 12  SSFSQIKQLQANLITNGHFHFSSSRTK--LLELCAISPFGDLSHALHIFRHIHSP-STKD 71
           SS ++++Q+ A  I +G     +   K  +  L ++     +S+A  +F  I  P +   
Sbjct: 28  SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87

Query: 72  WNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARSEVMQFHSQ 131
           WN +IRG A   N  +A   YR M  S G    D  T  F +KA             HS 
Sbjct: 88  WNTLIRGYAEIGNSISAFSLYREMRVS-GLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 147

Query: 132 VLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGRPSDA 191
           V+R GF + + +Q +LL  YA   D+  A KVFD+MPE D+ +WNS+I GFA+ G+P +A
Sbjct: 148 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 207

Query: 192 IDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVVQVCNVVID 251
           + L+  M   G ++P+  T+   LSAC+++G L  G+ VH Y+ +  L   +   NV++D
Sbjct: 208 LALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 267

Query: 252 MYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKL-GRSGIYPDA 311
           +YA+CG V++A  +F+ M  +K+ ++W ++I+  A++G G +A++LF+ +    G+ P  
Sbjct: 268 LYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCE 327

Query: 312 ISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIVSS 371
           I+++ +L AC+          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 328 ITFVGILYACSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 387

Query: 372 MP--FPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRRWDD 431
                PN+V+W+TLLGAC  +GD  +AE A  +++++     GD+VLLSN+YA+ +RW D
Sbjct: 388 XXPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSD 447

Query: 432 VGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKAIGY 491
           V ++R  M R  VKK PG S +EV   +H+FL GD+SH     IYAKL E+  R+++ GY
Sbjct: 448 VQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGY 507

Query: 492 TAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVVIKL 551
             +  NV  D+EEE+K N + YHSEK+A+AF L  T E +PI V+KNLR+C DCH+ IKL
Sbjct: 508 VPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKL 567

Query: 552 ISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           +SK YNREI VRDR+RFH FK+G CSC+DYW
Sbjct: 568 VSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

BLAST of Carg15818 vs. Swiss-Prot
Match: sp|Q9C6T2|PPR68_ARATH (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H11 PE=2 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 6.4e-105
Identity = 200/574 (34.84%), Postives = 329/574 (57.32%), Query Frame = 0

Query: 7   LLQKCSSFSQIKQLQANLITNGHFHFSS-SRTKLLELCAISPF-GDLSHALHIFRHIHSP 66
           LL++C +  + KQ+ A  I    F+ SS S + +L  CA S +   +++A  IFR I  P
Sbjct: 36  LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDP 95

Query: 67  STKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARSEVMQ 126
            T D+N +IRG     +   A+ +Y  M   +  +  D  T    LKAC R  +  E  Q
Sbjct: 96  CTFDFNTMIRGYVNVMSFEEALCFYNEM--MQRGNEPDNFTYPCLLKACTRLKSIREGKQ 155

Query: 127 FHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFAQGGR 186
            H QV + G +ADV +Q +L++ Y +  +++ +  VF+++     ASW+S+++  A  G 
Sbjct: 156 IHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGM 215

Query: 187 PSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVVQVCN 246
            S+ + LF+ M  + NL+     +  AL AC+  G L  G ++H ++     +  + V  
Sbjct: 216 WSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQT 275

Query: 247 VVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGIY 306
            ++DMY KCG +DKA  +F+ M  +++ +T++ MI   A+HG+G  AL +F K+ + G+ 
Sbjct: 276 SLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLE 335

Query: 307 PDAISYLAVLCACNHAGLIEDGLK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 366
           PD + Y++VL AC+H+GL+++G +                                   E
Sbjct: 336 PDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALE 395

Query: 367 IVSSMPF-PNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAARRR 426
            + S+P   N V+W+T L  CR   ++++ ++A+++L+++   + GD++L+SN+Y+  + 
Sbjct: 396 TIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQM 455

Query: 427 WDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRIKA 486
           WDDV R R  +  + +K+TPGFS +E+KG  H+F+  DRSH  C+EIY  L ++ +++K 
Sbjct: 456 WDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKF 515

Query: 487 IGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCHVV 546
            GY+ +   +L +++EE+K   L  HS+K+A+AFGL  T  G+ I++ +NLR+C DCH  
Sbjct: 516 EGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTY 575

Query: 547 IKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
            K IS  Y REI VRDR RFH FK G CSCKDYW
Sbjct: 576 TKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606

BLAST of Carg15818 vs. TrEMBL
Match: tr|A0A0A0KB77|A0A0A0KB77_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052690 PE=4 SV=1)

HSP 1 Score: 964.1 bits (2491), Expect = 1.4e-277
Identity = 469/576 (81.42%), Postives = 506/576 (87.85%), Query Frame = 0

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
           MAYF+LLLQKCSSFSQIKQLQANLI NG FHFSSSRTKLLELCAIS FGDLS+ALHIFR+
Sbjct: 1   MAYFNLLLQKCSSFSQIKQLQANLIINGDFHFSSSRTKLLELCAISSFGDLSYALHIFRY 60

Query: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARS 120
           I  PST DWNAVIRGTALSS+P+NA+FWYR M AS G HR+DALTCSFALKACARALARS
Sbjct: 61  IPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKACARALARS 120

Query: 121 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
           E +Q HSQ+LRFGF+ADVLLQTTLLDAYAK+ DLD AQK+FDEMP+PDIASWN+LIAGFA
Sbjct: 121 EAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFA 180

Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240
           QG RP+DAI  FKRMK DGNLRPNAVTVQGAL ACSQLG LKEGE+VHKYI EE L++ V
Sbjct: 181 QGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNSNV 240

Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
           QVCNVVIDMYAKCGS+DKAYWVFENMRC+KSLITWNTMIMAFAMHGDGHKALDLFEKLGR
Sbjct: 241 QVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300

Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           SG+ PDA+SYLAVLCACNHAGL+EDGLK                                
Sbjct: 301 SGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQRGLEPNIKHYGSMVDLLGRAGRLKE 360

Query: 361 XXEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
             +IVSS+PFPNMVLWQTLLGACRTYGDV+MAE+ASRKLVEMGFISCGDFVLLSNVYAAR
Sbjct: 361 AYDIVSSLPFPNMVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGDFVLLSNVYAAR 420

Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
           +RWDDVGRVRDAMRRRDVKKTPGFSYIE+KG M+KF+ GD+SHSSCREIYAKLDEI  RI
Sbjct: 421 QRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRI 480

Query: 481 KAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
           KA GY+A+T NVLHDI +EDK N LCYHSEKLAVAFGL+CTEEGTPIQVIKNLRICGDCH
Sbjct: 481 KAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCH 540

Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           VVIKLISK Y REI VRDRTRFHRFK+GLCSCKDYW
Sbjct: 541 VVIKLISKIYIREIIVRDRTRFHRFKEGLCSCKDYW 576

BLAST of Carg15818 vs. TrEMBL
Match: tr|A0A1S3C3U7|A0A1S3C3U7_CUCME (pentatricopeptide repeat-containing protein At1g34160 OS=Cucumis melo OX=3656 GN=LOC103496566 PE=4 SV=1)

HSP 1 Score: 951.0 bits (2457), Expect = 1.2e-273
Identity = 460/576 (79.86%), Postives = 501/576 (86.98%), Query Frame = 0

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
           MAYF+LLLQKCSSFS IKQLQANLI NG FHFSSSRTKLLELCA+S  GDLS+ALHIFR+
Sbjct: 1   MAYFNLLLQKCSSFSHIKQLQANLIINGDFHFSSSRTKLLELCAVSSCGDLSYALHIFRY 60

Query: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARS 120
           I  PST DWNA+IRGTALSS+P+NA+ WYR M AS GPHR+DALTCSFALKACARALA S
Sbjct: 61  IRYPSTNDWNAIIRGTALSSDPANAVVWYRAMAASNGPHRIDALTCSFALKACARALACS 120

Query: 121 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
           E +Q HSQ+LRFGF+ADVLLQTTLLD YAKV DLD AQK+FDEMP PDIASWN+LI+GFA
Sbjct: 121 EAIQLHSQLLRFGFNADVLLQTTLLDVYAKVGDLDLAQKLFDEMPRPDIASWNALISGFA 180

Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240
           QG RP+DAI +FKRMKE GNLRPNAVTVQGAL ACSQLGTLKEGENVHKYI EE LD  V
Sbjct: 181 QGSRPADAIMMFKRMKEGGNLRPNAVTVQGALLACSQLGTLKEGENVHKYIVEEKLDMNV 240

Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
           QVCNVVIDMYAKCGS+DKAYWVFENMRC+KSLITWNTMIMAFAMHGDG++ALDLF+KLGR
Sbjct: 241 QVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGYEALDLFKKLGR 300

Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           SG+ PDA+SYLAVLCACNHAGL+EDGLK                                
Sbjct: 301 SGMSPDAVSYLAVLCACNHAGLVEDGLKLFNLMAQRGLEPNIKHYGSMVDLLGRAGRLKE 360

Query: 361 XXEIVSSMPFPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAAR 420
             +IV+S+PFPNMVLWQTLLGACRTYGDV+MAE+AS KLVEMGFISCGDFVLLSNVYAAR
Sbjct: 361 AYDIVNSLPFPNMVLWQTLLGACRTYGDVEMAELASGKLVEMGFISCGDFVLLSNVYAAR 420

Query: 421 RRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFRI 480
           +RWDDVGRVRDAMR RDVKKTPGFSYIE+KG M++F+YGD+SHSSCREIYAKLDEI  RI
Sbjct: 421 QRWDDVGRVRDAMRIRDVKKTPGFSYIEIKGKMYQFVYGDQSHSSCREIYAKLDEINLRI 480

Query: 481 KAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDCH 540
           KA GY+A+T NVLHDI +EDK N LCYHSEKLAVAFGL+CTEEG PIQVIKNLRICGDCH
Sbjct: 481 KAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGIPIQVIKNLRICGDCH 540

Query: 541 VVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           VVIKLISK YNREI VRDRTRFHRFK+GLCSCKDYW
Sbjct: 541 VVIKLISKIYNREIIVRDRTRFHRFKEGLCSCKDYW 576

BLAST of Carg15818 vs. TrEMBL
Match: tr|A0A2I4FME1|A0A2I4FME1_9ROSI (pentatricopeptide repeat-containing protein At1g34160 OS=Juglans regia OX=51240 GN=LOC109000395 PE=4 SV=1)

HSP 1 Score: 776.9 bits (2005), Expect = 3.1e-221
Identity = 391/577 (67.76%), Postives = 445/577 (77.12%), Query Frame = 0

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRTKLLELCAISPFGDLSHALHIFRH 60
           MA  + L+QKC+S S +KQLQA+ IT     F SSRTKLLELCA+SPFGDLS+A H+FRH
Sbjct: 1   MASLESLIQKCNSLSHVKQLQAHFITTSQLLFCSSRTKLLELCAVSPFGDLSYATHLFRH 60

Query: 61  IHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALARS 120
           I +PST DWNAV+RG A    P+ AI WYRTM  S+   RVDALTCSFALKACARALARS
Sbjct: 61  IQNPSTNDWNAVVRGLAAGPEPTRAISWYRTM--SRQSCRVDALTCSFALKACARALARS 120

Query: 121 EVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGFA 180
           E MQ HSQV+R GF ADVLL TTLLDAYAK  DLD A+KVFDEM   DIASWN+LIAG A
Sbjct: 121 EAMQIHSQVVRLGFYADVLLMTTLLDAYAKSGDLDGAKKVFDEMVVRDIASWNALIAGLA 180

Query: 181 QGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTVV 240
           QG RPS+AI+LF  M+ +G  +P+ +TV GALSACSQLG LKEGE VH YI  E LD  V
Sbjct: 181 QGSRPSEAIELFNGMRVEG-WKPDEITVLGALSACSQLGALKEGEKVHSYIMGEKLDMNV 240

Query: 241 QVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLGR 300
           QVCN VIDMYAKCG  +KAY VF+NM C +SL+TWNTMIMAFAMHGDG+KAL+LFE++G+
Sbjct: 241 QVCNAVIDMYAKCGFANKAYTVFKNMCC-RSLVTWNTMIMAFAMHGDGYKALELFEQMGQ 300

Query: 301 SGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           +G++PDA+SYL  LCACNHAGL+ DG++                                
Sbjct: 301 AGVHPDAVSYLGALCACNHAGLVNDGVRLFDSMAGSGLTPNVKHYGSVVDLLGRAGRLKE 360

Query: 361 XXEIVSSMPF-PNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYAA 420
             +IVSSMP   + VLWQTLLGAC+TYG+V+MAE+ASRKLVEMG  SCGDFVLLSNVYAA
Sbjct: 361 AYDIVSSMPMKSDEVLWQTLLGACKTYGNVEMAEIASRKLVEMGSKSCGDFVLLSNVYAA 420

Query: 421 RRRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMFR 480
             RW DV RVR AM+ RDVKK PGFSYIEV G +HKF+ GD++H + REIYAKLDEI FR
Sbjct: 421 HERWKDVDRVRTAMKDRDVKKIPGFSYIEVDGVIHKFVNGDQNHFNWREIYAKLDEIKFR 480

Query: 481 IKAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGDC 540
            KA GY AET  VLHDI +E+K N LCYHSEKLAVAFGL  T EGTPIQVIKNLRICGDC
Sbjct: 481 TKAYGYVAETNYVLHDIGQEEKENALCYHSEKLAVAFGLISTAEGTPIQVIKNLRICGDC 540

Query: 541 HVVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           HVVIK+ISK YNREI VRDR RFHRF +GLCSCKDYW
Sbjct: 541 HVVIKIISKIYNREIVVRDRARFHRFTEGLCSCKDYW 573

BLAST of Carg15818 vs. TrEMBL
Match: tr|M5VIA7|M5VIA7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G045500 PE=4 SV=1)

HSP 1 Score: 766.9 bits (1979), Expect = 3.2e-218
Identity = 418/578 (72.32%), Postives = 470/578 (81.31%), Query Frame = 0

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHF-SSSRTKLLELCAISPFGDLSHALHIFR 60
           MA  + LLQKC+S ++IKQLQ++L+T+G F F  S  TKL+ELCA+SP  DLSHA+ +F 
Sbjct: 1   MANLESLLQKCTSLARIKQLQSHLLTSGKFQFYPSLTTKLIELCALSPIADLSHAITLFH 60

Query: 61  HIHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALAR 120
            +  PST  WNAV+RG A S  P+ AI WY+TM  SK   +VDALTCSFALKACARALA 
Sbjct: 61  QLRKPSTNQWNAVVRGLAQSLQPTQAISWYKTM--SKASQKVDALTCSFALKACARALAF 120

Query: 121 SEVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGF 180
           SE MQ HSQ++RFGF  DVLLQTTLLD YAKV DL  AQKVFDEM E DIASWN+LIAG 
Sbjct: 121 SEAMQIHSQIVRFGFGVDVLLQTTLLDVYAKVGDLGFAQKVFDEMSERDIASWNALIAGL 180

Query: 181 AQGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTV 240
           AQG RP++AI LFKRM E+  L+PN VTV GALSACSQLG +K GE +H YI EE LD  
Sbjct: 181 AQGSRPTEAIALFKRMSEEEGLKPNEVTVLGALSACSQLGGVKGGEKIHVYIMEEKLDMH 240

Query: 241 VQVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLG 300
           V VCN VIDMYAKCG VDKAYWVF+NM+C K+LITWNTMIMAFAMHGDG KAL+LF ++ 
Sbjct: 241 VIVCNAVIDMYAKCGFVDKAYWVFKNMKCGKNLITWNTMIMAFAMHGDGGKALELFGEMA 300

Query: 301 RSGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           +SG+ PDA+SYLA LCACNHAGL+EDG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 KSGVCPDAVSYLAALCACNHAGLVEDGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXEIVSSMP-FPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYA 420
           XXX      P F ++VLWQTLLGA +TYG+V+MAEMASRKLVEMG   CGDFVLLSNVYA
Sbjct: 361 XXXXXXXXXPMFADVVLWQTLLGASKTYGNVEMAEMASRKLVEMGSKGCGDFVLLSNVYA 420

Query: 421 ARRRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMF 480
           A  RWDDVGRVR+AM+RRDVKK PGF YIEV G +HKF+ GD+SH   REIYAKLDEIM 
Sbjct: 421 AHERWDDVGRVREAMKRRDVKKIPGFGYIEVDGVIHKFVNGDQSHVKWREIYAKLDEIML 480

Query: 481 RIKAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGD 540
            +KA GY A+T NVLHDI EE+K N L YH EKLAVAFGL  T EGTPIQVIKNLRIC D
Sbjct: 481 SVKAYGYVAKTNNVLHDIGEEEKENALSYHCEKLAVAFGLISTSEGTPIQVIKNLRICDD 540

Query: 541 CHVVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           CH VIKLISK YNREI VRDR RFHRFK+G CSC+DYW
Sbjct: 541 CHAVIKLISKIYNREIIVRDRARFHRFKEGCCSCRDYW 576

BLAST of Carg15818 vs. TrEMBL
Match: tr|A0A2P6PRK6|A0A2P6PRK6_ROSCH (Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0273501 PE=4 SV=1)

HSP 1 Score: 759.6 bits (1960), Expect = 5.1e-216
Identity = 400/578 (69.20%), Postives = 459/578 (79.41%), Query Frame = 0

Query: 1   MAYFDLLLQKCSSFSQIKQLQANLITNGHFHFSSSRT-KLLELCAISPFGDLSHALHIFR 60
           MA  +LLLQKC S + IKQLQA+L+T G F    S T KLLELCA+ P  +L +A  +F 
Sbjct: 1   MAKLELLLQKCDSLTHIKQLQAHLLTIGRFQLYPSITIKLLELCALPPITNLPYATTLFH 60

Query: 61  HIHSPSTKDWNAVIRGTALSSNPSNAIFWYRTMTASKGPHRVDALTCSFALKACARALAR 120
            + SPST+ WNAV+RG A S  P+ A+ WY TM  S+   +VDALTCSFALKACARALA 
Sbjct: 61  QLQSPSTRHWNAVVRGLAQSLQPTQAVTWYATM--SRSSQKVDALTCSFALKACARALAL 120

Query: 121 SEVMQFHSQVLRFGFDADVLLQTTLLDAYAKVEDLDQAQKVFDEMPEPDIASWNSLIAGF 180
           SE MQ HSQ+LRFGF  DVLL+TTLLD YAKV  L  AQKVFDEMPE DIA WN+L+AG 
Sbjct: 121 SEAMQIHSQLLRFGFGRDVLLRTTLLDVYAKVGKLGFAQKVFDEMPERDIACWNALVAGL 180

Query: 181 AQGGRPSDAIDLFKRMKEDGNLRPNAVTVQGALSACSQLGTLKEGENVHKYIAEENLDTV 240
           AQG +PS+A+ LF+RM E+  L+PN VTV GALSACSQLG L+ GE +H YI    LDT 
Sbjct: 181 AQGSQPSEALALFERMAEEEGLKPNEVTVLGALSACSQLGALRGGERIHTYIVNAKLDTH 240

Query: 241 VQVCNVVIDMYAKCGSVDKAYWVFENMRCEKSLITWNTMIMAFAMHGDGHKALDLFEKLG 300
           V VCN VIDMYAKCG VD+AY  FENMRC K+LITWNTMIMAFAMHGDG KAL+LFEK+G
Sbjct: 241 VIVCNAVIDMYAKCGFVDRAYEAFENMRCGKNLITWNTMIMAFAMHGDGCKALELFEKMG 300

Query: 301 RSGIYPDAISYLAVLCACNHAGLIEDGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           ++G+ PDA+SYLA LCACNHAGL+EDG+K XXXXXXXXXXXXXXXXXXXX          
Sbjct: 301 KNGVCPDAVSYLAALCACNHAGLVEDGVKLXXXXXXXXXXXXXXXXXXXXDLLGRAGRLQ 360

Query: 361 XXXEIVSSMP-FPNMVLWQTLLGACRTYGDVKMAEMASRKLVEMGFISCGDFVLLSNVYA 420
              EIV SMP FP++VLWQTLLGA +TYG+V+MAEMASR LVE+G   CGDFVLLSNVYA
Sbjct: 361 EAYEIVKSMPMFPDVVLWQTLLGASKTYGNVEMAEMASRNLVELGSEGCGDFVLLSNVYA 420

Query: 421 ARRRWDDVGRVRDAMRRRDVKKTPGFSYIEVKGNMHKFLYGDRSHSSCREIYAKLDEIMF 480
           A  RWDDVGRVR+AM+RRDVKK PGF YIEV+G +HKF+ GD++H +  EIY+KLDEI  
Sbjct: 421 AHNRWDDVGRVREAMKRRDVKKIPGFGYIEVEGVIHKFVNGDQNHVNSHEIYSKLDEIKC 480

Query: 481 RIKAIGYTAETGNVLHDIEEEDKVNVLCYHSEKLAVAFGLSCTEEGTPIQVIKNLRICGD 540
           RIKA GY A+T +VLHDI EEDK N L YH EKLAVAFGL  T+EGTPIQVIKNLRIC D
Sbjct: 481 RIKAYGYVAKTNHVLHDIGEEDKENALSYHCEKLAVAFGLISTDEGTPIQVIKNLRICDD 540

Query: 541 CHVVIKLISKSYNREIFVRDRTRFHRFKDGLCSCKDYW 577
           CHVV+KLIS+ YNREI VRDR RFHRF+DGLCSC+DYW
Sbjct: 541 CHVVMKLISEIYNREIIVRDRARFHRFQDGLCSCRDYW 576

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022960919.10.0e+0099.13pentatricopeptide repeat-containing protein At1g34160 [Cucurbita moschata] >XP_0... [more]
XP_022990287.10.0e+0092.01pentatricopeptide repeat-containing protein At1g34160 isoform X1 [Cucurbita maxi... [more]
XP_023526446.10.0e+0097.57pentatricopeptide repeat-containing protein At1g34160 isoform X1 [Cucurbita pepo... [more]
XP_004140941.12.1e-27781.42PREDICTED: pentatricopeptide repeat-containing protein At1g34160 [Cucumis sativu... [more]
XP_008456696.11.8e-27379.86PREDICTED: pentatricopeptide repeat-containing protein At1g34160 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT1G34160.16.1e-18356.53Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G56550.11.3e-11336.59Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G21065.12.0e-10943.61Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G31920.13.5e-10634.84Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G47530.11.9e-10436.88Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q9FX24|PPR71_ARATH1.1e-18156.53Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana OX... [more]
sp|B8YEK4|OGR1_ORYSJ1.2e-14848.37Pentatricopeptide repeat-containing protein OGR1, mitochondrial OS=Oryza sativa ... [more]
sp|Q9LXY5|PP284_ARATH2.4e-11236.59Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana OX... [more]
sp|A8MQA3|PP330_ARATH3.6e-10843.61Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... [more]
sp|Q9C6T2|PPR68_ARATH6.4e-10534.84Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0KB77|A0A0A0KB77_CUCSA1.4e-27781.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052690 PE=4 SV=1[more]
tr|A0A1S3C3U7|A0A1S3C3U7_CUCME1.2e-27379.86pentatricopeptide repeat-containing protein At1g34160 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A2I4FME1|A0A2I4FME1_9ROSI3.1e-22167.76pentatricopeptide repeat-containing protein At1g34160 OS=Juglans regia OX=51240 ... [more]
tr|M5VIA7|M5VIA7_PRUPE3.2e-21872.32Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G045500 PE=4 SV=1[more]
tr|A0A2P6PRK6|A0A2P6PRK6_ROSCH5.1e-21669.20Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
IPR032867DYW_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg15818-RACarg15818-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 442..566
e-value: 4.3E-39
score: 133.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 308..342
e-value: 3.9E-6
score: 24.7
coord: 171..204
e-value: 8.5E-8
score: 29.9
coord: 273..307
e-value: 2.1E-7
score: 28.7
coord: 242..269
e-value: 0.0021
score: 16.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 167..215
e-value: 7.6E-10
score: 38.7
coord: 271..317
e-value: 5.9E-9
score: 35.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 243..268
e-value: 1.4E-4
score: 21.7
coord: 142..166
e-value: 0.0018
score: 18.3
coord: 345..368
e-value: 0.28
score: 11.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 406..440
score: 5.985
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 168..202
score: 11.674
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 102..136
score: 6.445
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 204..238
score: 6.358
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 271..305
score: 11.181
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 137..167
score: 8.331
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 306..340
score: 10.841
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 239..269
score: 8.232
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 341..375
score: 8.079
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 65..95
score: 5.415
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 14..152
e-value: 1.1E-10
score: 43.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 271..455
e-value: 1.6E-32
score: 115.1
coord: 153..270
e-value: 1.2E-28
score: 102.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 79..297
NoneNo IPR availablePANTHERPTHR24015:SF717SUBFAMILY NOT NAMEDcoord: 3..495
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 3..495