Carg15770 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15770
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transcription elongation factor SPT5
Location	Cucurbita_argyrosperma_scaffold_055 : 258016 .. 264591 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTGGTCGTTCCAGTGAGCTTGGCTTAGGGCACAGTTGAGCTTCTGAATTTCGGTTTCAGAGATGCCTCGTCGTAGGGACGACGATGAGGATGACGATATTGATGCTGATGATGAAGAGTATGAGGATGAGATGGAGCAGCCTTTGGATGACGAGGAGGAAGAGGAAAATCGCTCGAGTAAGAAGCGGAGGAGATCGAATTTTATAGACGATGTTGCTGAGGAGGATGAGGATGAGGAGGAAGAAGAGGAGGATGATGAGGATTTTGGTGGCGGTGCTAGGCGGCGGCGTGCTAAGAGGCCTAGTGGTTCTCAGTTTTTGGATATTGAGGCGGAGGTCGATAGCGAGGATGATGAAGAGGAGGACGATGGAGAGGACGGTATGTTTCACGTAGTTGGCTTTGTGTTTTTATTGGTCCTATTAGTTCAAATTTGAGGGAAAACTGGTTAGCGTATGAATTAGAGTGCGCTTAGGGTTTTTCTTTTTGGGATTTCCTCAGTATGTATTCAGCTTAGTGGTTAAAAATGGTTGATAATCCAAGCTTTTTCTGGATGGCCTATTTCATTAGAGGCACATTCAGTCAATCCAGTTGAATAGTGAATTAGAATGGCTAGTCAGGAGTCTAAATTGCGAGTTTCAGAGAACGAGAAGTATTCCTGTACTAGTTTCTGGCACGTTAGTCATGCCTTGAAGTTTGATTATTTGAACGGGAATTCGATGTATATGGTTGTGACCAATTGTTTGTTTTTTTTTTCCCAGTAATTTGGTGAAATGGCTGCAAGTCAATTTTTTTTTTTTTAACAAGAAAAAAAACTCTTAATTGTTATGTGAAAAATAAGTAGTTATACTATAAAAATTTATAGCTCACAATTCGAGAACACTATCTGAAACCCTCGGTAAGAGTTTACAAAAAGACACCCCTACTATAATCAATTTCACGAGGAGAGGAATTATGAATCTGCTGGACATGGCCAACCGATAAGAGGCTTGAAATTTAGCAACATCCAGTCAAATGGTTCTTTAGTTTGTGCCATTAATCCATTAAAGCCTAGTATTTCCTTAGAGCTCCAGAGGGTTTATCAAACATTCACGAGCAACCAAAATTTATGAAGACATGTTCTCAACATCGTCTCTATGAAACATGAAAAAAGGCGTGAAGTGTGAACTGATTTGTTTGTCCTCCTCTGCCTTCGTAAAAAGTGCACATGTTTGGTTTAGGGTTGCCAACTTATTTTTTCTGTGTTAATGCCATCCTGTCATACAATCCCCTACAAAGCTTCCCCCTTTCAGGACTTCTCAATCTCCAGAAAACATTCATCCAAGTCTTCCTTCAAGAATTTAAGATTCAATGTTCTTGTGTTCAGCCGTTGCAAAATACTAATACTAGTAGTAACAATAATACAGTGTGAATTGGAGTGCCACAATCCATCCACATAAGCACCATTCCGAAAAAAGTTTTCCTATCATTACTGATCTTGATTACCTCCAGTTTTTGTATACGGAAACAACTTTTTAAATGTTTCACCAATAATTTCTTTCACTGCCACATTTCCTCTTATTTATAGTATTACCATTCTCGCCCTTTCTGTAATTGCAAGCCACCACCTTATGCTGCAATTCATGAGGTTCGTCAGTAAATTTCTTGAATCATTCAGCTAAATGAGCTTCAATTTTCTTCCACTAGTTGCCAATTCCTTAACCTCCACACTCCAAGGGCCTGAAACTTTACTTTCCTTTCTTCATCAGCTACCAAAAAGCCCCTTGACTTCCTTCTCAATCTGAAGAACTATCCCCTTAGCCATGAGAAATAAGGACGTATAATACAAAAGAAAGCTTGAGAACCAGTTACAAACAATTATCCAATCCCTTTTATAAGATACAAAATTTTCCATCATCTCACAATATAGAGCACCTTCTCTACTGCAGGGCTTCAAAATTCTAACTGGATTACCATGTAATACTAGGGAAGTGCCATTTTTACATGTATCTTAAATGGTCAGTCTAGTTGCTTTCTGTCAAACTACTGATCTTTGCCTAGGATGTTCAGGAGTAGGTTTTCCCTAAGAGTATTACAATATGGGGTGGGGTTTAAGAATATAGGATTGTTTGGTTCAAACTCTCAGTAACCTTAGTGCTTGGAACCATTGATAATTACTACCAATTTTCATGAGAATGTGCACTGTAAACAAGAAAATGGTCAATAAACACTTTTGGTCCCTGCTGTGAGTAATCTCATAAAAATGAAGCGTCAACTTTTATTATGTAATGGTTTTGTCTTTATTTTATGAACATGTTTGATCTCTAATATGTTTATCAATCTGCAGACGTGAAAAAACTCGATTAACTCTTAATAATGTTTTCACGATAAGGCCAAACCATTACAAATTTGACAGTACTAGGTAAGTTGTTACATAGTAAAGGGGAGGGACAAAATTGTTACATATTTTGAAGTATAGGTACTAAATTGTTACAATTAATGTTTAGGGACTAAATCATTACTTTGATGAGAGTACAAGGACCATAAGAGTTCTTAACCTAAGAAAATCAATATGGCAAATAACTGTAGAATTAATTATTCATTTCACTAGTTTCTTTGTACACGTGACTTTCATTTATGCATGGGTCAAGTAAATCAGTAATCTTTTAATCTTGCAGACTTCATAGTTGATGGTGCAACTGATATACCCGATGAAGATGAAAATAGAAGGATGCATCGCCGCCCATTGCTACCCCGAGAGGATGAACAGGAGGATGTTGAAGCACTTGAAAGAAGGATTCAAGCTAGATATGCAAGGTCAAATCATATGGAATATGACGAGGAGACAACTGAAGTGGAGCAGCAAGCTCTTCTACCTTCTGTAAGGGATCCAAAGTTGTGGATGGTTAAATGCGCGGTATGCCTACCTATACTCACAAAAATTTCATATTTTCTTTAGTTTCTTATTCCCCAAGATCTTTCCCTTTGGAGTACTTGTATGAGAGAATGAATGTACATGATTAATGCATACACAACTTTTTGTTTGTTAGATTGGCCATGAGAGAGAGGCTGCTGTTTGTCTAATGCAAAAATGCATTGATAGAGGGCCTGAAATGCAAATAAGATCTGCAATTGCTCTTGATCATTTGAAGAACTTTATATATATTGAAGCGGACAAAGAAGCCCATGTTAGAGAGGTATATTATGCTCTTTTATCATATGTTATTGAATAAAGATCACATTCAATTATGTTGGCAGTGGATCAACTCTTCAAATTTGTTTTGGTTATTGGCACATCCTATTTTTTGACTGAATTCAATTCTGTACGTAGTCACTAACTCTTCATTTTTTTTTTCTGTGTTTTAGGCTTGTAAAGGTCTACGCAACATATATTCACAAAAAGTAATGCTTGTTCCAATTAAAGAGATGACTGATGTTCTCTCTGTTGAAAGCAAAGCAATTGATCTTTCCAGAGATACGTGGGTCAGGATGAAGATTGGGACATACAAGGGGGATCTTGCCAAGGTAATTCTGGTTCTTTCAGTAAGTTCAGATATTTCACTCAATCTATCTCTCTTTGACGCATCAAGCTTTCGTTTCTTTAGGTGGTGGATGTTGATAATGTGCGGCAGAGGGTTACTGTGAAACTTATTCCTCGGATAGACCTACAGGCTCTTGCAAACAAATTGGTAATGTTTTGAAGGACATTATTTTTTATTGCCTTTGGTATTTCCTCATTATGGTATTGAACTCACAATCTTCAAATGTTGTCTCATATTGGGAAGTTTCTTAAGCTTTACTTTTTAAGTTTTCATCTGTCTGCAGTCCTTGTTAATATGTTTGTAAACATATTTTGTAGGTAGCATTTCATGTCTTCATGGATTTTAGTATATAAGTAAATATGAGTGTTTATATATTTATGTATTCATGTATAACATAGGTTCCTTCTCTTGGATATTGACATCTTTCTATGATTGAGAAGGAATGCATTTATTTTATACCAAGTTCTCTTTCAGGAAGGTAGAGAAGTTGCTAAGAAGAAGGCATTTGTTCCTCCACCCCGTTTTATGAATATTGATGAAGCTAGGTATCCAAATTGTTTCTCTGATTGTAACCTTGTCCCTTATATTTGATATAAATTGTTGTTTAAAGTCCATATTTACTTACTCTTCTTCATATCCAGAGAGTTGCATATCCGTGTAGAGCGCAGACGCGATCCCATTACTGGAGAATACTTTGAGAACATAGGTGGCATGTTTTTCAAAGATGGTTTCTTGTACAAAACAGTGTCCATGAAGTCAATAAGTGCCCAAAACATAAAACCAACTTTTGATGAACTTGAGAAATTTCGAAAGCCTGGGGAAAATGGTGATGGGGATATTGCTAGTTTGTCTACCTTGTTTGCAAACCGAAAGAAAGGGCACTTTATGAAGGGTGATGCTGTCATTGTTGTCAAGGGGGATCTCAAGAATCTGAAAGGATGGGTAGAGAAAGTAGAGGAAGAGAATGTCCACATCAGACCAGAAATGAAAGGCCTTCCTGTAAGAACTCAACTAAACTGGTTCTATCTTGTTTTTCATCATTTTATTCAAAGGGTCAAGTTTGTATCTAGTGTGACCCTTTTTTTTCTCAATAGAAAACTCTTGCTGTGAATGAAAGAGAACTTTGCAAGTACTTTGAGCCTGGGAATCATGTAAAAGTTGTAACGGGGACTCAGGAGGGGGCTACTGGTATGGTTGTGAAGGTGGAGCAGCATGTGCTTATTATACTGTCTGATACAACCAAGGAACACGTGAGTTAGACTTTCTTGGAAGTATTATTGAATCATAGGTCTTGCTTATTATTGAATGGTATTTTACTGATAATGTGCTAAAATGCCCTAAATCTCTATCATCTTCAGATCCGGGTATTTGCTGATGATGTTGTTGAGAGCTCTGAGGTAACGACTGGTGTGACGAAAATTGGGGATTATGAACTTCATGATCTTGTGTTATTGGAGTAAGTAGTTGTTAACATCATTTTTTATTCTAACTTTTATGTATAAGAATTGGATTCATAGAATGTCATTAACTTCTGCAGTAATATGAGCTTTGGCGTGATTATACGTGTAGAAAGTGAGGCTTTTCAGGTGAGTATGCTTTGGATCATGTATGCGATTCTGTCATTTTGTAGTCAATAATTTCATGAGTGTGATTTTGCGCTAGGTTCTTAAGGGTATTCCAGATAGACCTGAGGTTGATATCGTTAAGTTGAGGGAAATAAAAAGTAAGATTGACAAGAAAATCAGTGTTCAAGATCGACACAATAACACAATTTCTGCCAAAGACATTGTCAGGATTCTTGAAGGTCCTTGTAAGGTTAGCTCTCTGTTTCATGATATCTATTTCCTTCTAGATGTCATTTTTTTTTTTTTTTATCAGAATGTTGCTTTGCTCCTACTATAGGGAAAACAAGGTCCAGTGGAGCACATATACAGAGGTGTGCTGTTCATTTATGATCGCCATCACTTGGAACATGCTGGCTTTATATGTGTTAAATCACATTCTTGTGTTGTTGTGGGTGGATCCCGAACTAATGGAAATAGAAATGTAAGTTCTTGTTTTGATCTAATATGGGATCTTTTCTAGCACATTTTTGACAATTATATCTTGATAGTTGATTTCTGCTGCATTTTTCATCTTGCAGGGTAATTCGTACTCTAGGCTTGCTGGCCTTGGGGCTCCACCTCGTTTTCCTCAGTCGCCTAAGAGATTTTCCAGAGGAGGTCCCCCGAATGATTGTATGTTGTGGATCTCTTGTTTATCATGTACTCTTATTATTGTTTTGTGATTTTCTGATAAATGATTATTCTCTGGTTTTTTATTAAGTTGTTTACTTGTGATTCAGCTGGTGGAAGACATAGAGGTGGAAGAGGGCATCATGATGGTTTGGTTGGATCAACAGTGAAAGTTCGGCAGGGTCCTTACAAGGGTTACCGTGGGCGTGTTGTTGAAATAAAAGGCCAACTGGTTCGAGTAGAGCTTGAGTCTCAAATGAAAGTTGTCACAGGCATGTTTTGAACTTTTTCTGGAAATACTTGAATCTACCTGTTATATATATGTGGGATTACTTGTATCATCTTTTTTGAAGGATGTCTGGGAAATGTTAAGTCTCAAATGGAAGTGGAATATTTTCCATTAACACCATAATACTTGTTTTATTTGCAGTTGACCGCAATTTTATCTCAGATAATGTGGCTGTTTCAACCCCCTATCGGTAAATATAATATATGATAAAATTGATTTTGTTTGTTTCTTGTGATTTCAAGGTTCTAATGCTTGCTTTGTACCAGTGATACATCTAGATATGGTATGGGAAGTGAAACTCCCATGCATCCTTCTCGAACTCCTCTGCATCCGTACATGACCCCAATGAGAGATATGGGAAGTTAGTTCTCTTTCCATGTTGCCTTCTTTTTTTTTAATTCTTATTATACTTTACAAGGTTTATTCATGTTTTACTATCTGTTTATATAGCAACGCCAAGTCATGATGGCATGAGGACACCAATGCGAAATCGAGCATGGAATCCATATGCACCCATGAGTCCGTCAAGGTAA

mRNA sequence

ATTTTGGTCGTTCCAGTGAGCTTGGCTTAGGGCACAGTTGAGCTTCTGAATTTCGGTTTCAGAGATGCCTCGTCGTAGGGACGACGATGAGGATGACGATATTGATGCTGATGATGAAGAGTATGAGGATGAGATGGAGCAGCCTTTGGATGACGAGGAGGAAGAGGAAAATCGCTCGAGTAAGAAGCGGAGGAGATCGAATTTTATAGACGATGTTGCTGAGGAGGATGAGGATGAGGAGGAAGAAGAGGAGGATGATGAGGATTTTGGTGGCGGTGCTAGGCGGCGGCGTGCTAAGAGGCCTAGTGGTTCTCAGTTTTTGGATATTGAGGCGGAGGTCGATAGCGAGGATGATGAAGAGGAGGACGATGGAGAGGACGACTTCATAGTTGATGGTGCAACTGATATACCCGATGAAGATGAAAATAGAAGGATGCATCGCCGCCCATTGCTACCCCGAGAGGATGAACAGGAGGATGTTGAAGCACTTGAAAGAAGGATTCAAGCTAGATATGCAAGGTCAAATCATATGGAATATGACGAGGAGACAACTGAAGTGGAGCAGCAAGCTCTTCTACCTTCTGTAAGGGATCCAAAGTTGTGGATGGTTAAATGCGCGATTGGCCATGAGAGAGAGGCTGCTGTTTGTCTAATGCAAAAATGCATTGATAGAGGGCCTGAAATGCAAATAAGATCTGCAATTGCTCTTGATCATTTGAAGAACTTTATATATATTGAAGCGGACAAAGAAGCCCATGTTAGAGAGGCTTGTAAAGGTCTACGCAACATATATTCACAAAAAGTAATGCTTGTTCCAATTAAAGAGATGACTGATGTTCTCTCTGTTGAAAGCAAAGCAATTGATCTTTCCAGAGATACGTGGGTCAGGATGAAGATTGGGACATACAAGGGGGATCTTGCCAAGGTGGTGGATGTTGATAATGTGCGGCAGAGGGTTACTGTGAAACTTATTCCTCGGATAGACCTACAGGCTCTTGCAAACAAATTGGAAGGTAGAGAAGTTGCTAAGAAGAAGGCATTTGTTCCTCCACCCCGTTTTATGAATATTGATGAAGCTAGAGAGTTGCATATCCGTGTAGAGCGCAGACGCGATCCCATTACTGGAGAATACTTTGAGAACATAGGTGGCATGTTTTTCAAAGATGGTTTCTTGTACAAAACAGTGTCCATGAAGTCAATAAGTGCCCAAAACATAAAACCAACTTTTGATGAACTTGAGAAATTTCGAAAGCCTGGGGAAAATGGTGATGGGGATATTGCTAGTTTGTCTACCTTGTTTGCAAACCGAAAGAAAGGGCACTTTATGAAGGGTGATGCTGTCATTGTTGTCAAGGGGGATCTCAAGAATCTGAAAGGATGGGTAGAGAAAGTAGAGGAAGAGAATGTCCACATCAGACCAGAAATGAAAGGCCTTCCTAAAACTCTTGCTGTGAATGAAAGAGAACTTTGCAAGTACTTTGAGCCTGGGAATCATGTAAAAGTTGTAACGGGGACTCAGGAGGGGGCTACTGGTATGGTTGTGAAGGTGGAGCAGCATGTGCTTATTATACTGTCTGATACAACCAAGGAACACATCCGGGTATTTGCTGATGATGTTGTTGAGAGCTCTGAGGTAACGACTGGTGTGACGAAAATTGGGGATTATGAACTTCATGATCTTGTGTTATTGGATAATATGAGCTTTGGCGTGATTATACGTGTAGAAAGTGAGGCTTTTCAGGTTCTTAAGGGTATTCCAGATAGACCTGAGGTTGATATCGTTAAGTTGAGGGAAATAAAAAGTAAGATTGACAAGAAAATCAGTGTTCAAGATCGACACAATAACACAATTTCTGCCAAAGACATTGTCAGGATTCTTGAAGGTCCTTGTAAGGGAAAACAAGGTCCAGTGGAGCACATATACAGAGGTGTGCTGTTCATTTATGATCGCCATCACTTGGAACATGCTGGCTTTATATGTGTTAAATCACATTCTTGTGTTGTTGTGGGTGGATCCCGAACTAATGGAAATAGAAATGGTAATTCGTACTCTAGGCTTGCTGGCCTTGGGGCTCCACCTCGTTTTCCTCAGTCGCCTAAGAGATTTTCCAGAGGAGGTCCCCCGAATGATTCTGGTGGAAGACATAGAGGTGGAAGAGGGCATCATGATGGTTTGGTTGGATCAACAGTGAAAGTTCGGCAGGGTCCTTACAAGGGTTACCGTGGGCGTGTTGTTGAAATAAAAGGCCAACTGGTTCGAGTAGAGCTTGAGTCTCAAATGAAAGTTGTCACAGGCATTGGAATATTTTCCATTAACACCATAATACTTGTTTTATTTGCAGTTGACCGCAATTTTATCTCAGATAATGTGGCTGTTTCAACCCCCTATCGTGATACATCTAGATATGGTATGGGAAGTGAAACTCCCATGCATCCTTCTCGAACTCCTCTGCATCCGTACATGACCCCAATGAGAGATATGGGAACAACGCCAAGTCATGATGGCATGAGGACACCAATGCGAAATCGAGCATGGAATCCATATGCACCCATGAGTCCGTCAAGGTAA

Coding sequence (CDS)

ATGCCTCGTCGTAGGGACGACGATGAGGATGACGATATTGATGCTGATGATGAAGAGTATGAGGATGAGATGGAGCAGCCTTTGGATGACGAGGAGGAAGAGGAAAATCGCTCGAGTAAGAAGCGGAGGAGATCGAATTTTATAGACGATGTTGCTGAGGAGGATGAGGATGAGGAGGAAGAAGAGGAGGATGATGAGGATTTTGGTGGCGGTGCTAGGCGGCGGCGTGCTAAGAGGCCTAGTGGTTCTCAGTTTTTGGATATTGAGGCGGAGGTCGATAGCGAGGATGATGAAGAGGAGGACGATGGAGAGGACGACTTCATAGTTGATGGTGCAACTGATATACCCGATGAAGATGAAAATAGAAGGATGCATCGCCGCCCATTGCTACCCCGAGAGGATGAACAGGAGGATGTTGAAGCACTTGAAAGAAGGATTCAAGCTAGATATGCAAGGTCAAATCATATGGAATATGACGAGGAGACAACTGAAGTGGAGCAGCAAGCTCTTCTACCTTCTGTAAGGGATCCAAAGTTGTGGATGGTTAAATGCGCGATTGGCCATGAGAGAGAGGCTGCTGTTTGTCTAATGCAAAAATGCATTGATAGAGGGCCTGAAATGCAAATAAGATCTGCAATTGCTCTTGATCATTTGAAGAACTTTATATATATTGAAGCGGACAAAGAAGCCCATGTTAGAGAGGCTTGTAAAGGTCTACGCAACATATATTCACAAAAAGTAATGCTTGTTCCAATTAAAGAGATGACTGATGTTCTCTCTGTTGAAAGCAAAGCAATTGATCTTTCCAGAGATACGTGGGTCAGGATGAAGATTGGGACATACAAGGGGGATCTTGCCAAGGTGGTGGATGTTGATAATGTGCGGCAGAGGGTTACTGTGAAACTTATTCCTCGGATAGACCTACAGGCTCTTGCAAACAAATTGGAAGGTAGAGAAGTTGCTAAGAAGAAGGCATTTGTTCCTCCACCCCGTTTTATGAATATTGATGAAGCTAGAGAGTTGCATATCCGTGTAGAGCGCAGACGCGATCCCATTACTGGAGAATACTTTGAGAACATAGGTGGCATGTTTTTCAAAGATGGTTTCTTGTACAAAACAGTGTCCATGAAGTCAATAAGTGCCCAAAACATAAAACCAACTTTTGATGAACTTGAGAAATTTCGAAAGCCTGGGGAAAATGGTGATGGGGATATTGCTAGTTTGTCTACCTTGTTTGCAAACCGAAAGAAAGGGCACTTTATGAAGGGTGATGCTGTCATTGTTGTCAAGGGGGATCTCAAGAATCTGAAAGGATGGGTAGAGAAAGTAGAGGAAGAGAATGTCCACATCAGACCAGAAATGAAAGGCCTTCCTAAAACTCTTGCTGTGAATGAAAGAGAACTTTGCAAGTACTTTGAGCCTGGGAATCATGTAAAAGTTGTAACGGGGACTCAGGAGGGGGCTACTGGTATGGTTGTGAAGGTGGAGCAGCATGTGCTTATTATACTGTCTGATACAACCAAGGAACACATCCGGGTATTTGCTGATGATGTTGTTGAGAGCTCTGAGGTAACGACTGGTGTGACGAAAATTGGGGATTATGAACTTCATGATCTTGTGTTATTGGATAATATGAGCTTTGGCGTGATTATACGTGTAGAAAGTGAGGCTTTTCAGGTTCTTAAGGGTATTCCAGATAGACCTGAGGTTGATATCGTTAAGTTGAGGGAAATAAAAAGTAAGATTGACAAGAAAATCAGTGTTCAAGATCGACACAATAACACAATTTCTGCCAAAGACATTGTCAGGATTCTTGAAGGTCCTTGTAAGGGAAAACAAGGTCCAGTGGAGCACATATACAGAGGTGTGCTGTTCATTTATGATCGCCATCACTTGGAACATGCTGGCTTTATATGTGTTAAATCACATTCTTGTGTTGTTGTGGGTGGATCCCGAACTAATGGAAATAGAAATGGTAATTCGTACTCTAGGCTTGCTGGCCTTGGGGCTCCACCTCGTTTTCCTCAGTCGCCTAAGAGATTTTCCAGAGGAGGTCCCCCGAATGATTCTGGTGGAAGACATAGAGGTGGAAGAGGGCATCATGATGGTTTGGTTGGATCAACAGTGAAAGTTCGGCAGGGTCCTTACAAGGGTTACCGTGGGCGTGTTGTTGAAATAAAAGGCCAACTGGTTCGAGTAGAGCTTGAGTCTCAAATGAAAGTTGTCACAGGCATTGGAATATTTTCCATTAACACCATAATACTTGTTTTATTTGCAGTTGACCGCAATTTTATCTCAGATAATGTGGCTGTTTCAACCCCCTATCGTGATACATCTAGATATGGTATGGGAAGTGAAACTCCCATGCATCCTTCTCGAACTCCTCTGCATCCGTACATGACCCCAATGAGAGATATGGGAACAACGCCAAGTCATGATGGCATGAGGACACCAATGCGAAATCGAGCATGGAATCCATATGCACCCATGAGTCCGTCAAGGTAA

Protein sequence

MPRRRDDDEDDDIDADDEEYEDEMEQPLDDEEEEENRSSKKRRRSNFIDDVAEEDEDEEEEEEDDEDFGGGARRRRAKRPSGSQFLDIEAEVDSEDDEEEDDGEDDFIVDGATDIPDEDENRRMHRRPLLPREDEQEDVEALERRIQARYARSNHMEYDEETTEVEQQALLPSVRDPKLWMVKCAIGHEREAAVCLMQKCIDRGPEMQIRSAIALDHLKNFIYIEADKEAHVREACKGLRNIYSQKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNIDEARELHIRVERRRDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGDIASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNERELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVTTGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGIPDRPEVDIVKLREIKSKIDKKISVQDRHNNTISAKDIVRILEGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFICVKSHSCVVVGGSRTNGNRNGNSYSRLAGLGAPPRFPQSPKRFSRGGPPNDSGGRHRGGRGHHDGLVGSTVKVRQGPYKGYRGRVVEIKGQLVRVELESQMKVVTGIGIFSINTIILVLFAVDRNFISDNVAVSTPYRDTSRYGMGSETPMHPSRTPLHPYMTPMRDMGTTPSHDGMRTPMRNRAWNPYAPMSPSR

Homology

[Close]

BLAST of Carg15770 vs. NCBI nr
Match: XP_022957057.1 (putative transcription elongation factor SPT5 homolog 1 [Cucurbita moschata])

HSP 1 Score: 1379.0 bits (3568), Expect = 0.0e+00
Identity = 737/755 (97.62%), Postives = 737/755 (97.62%), Query Frame = 0


Query: 80  PSGSQXXXXXXXXXXXXXXXXXXXXXXFIVDGATDIPDEDENRRMHRRPLLPREDEQEDV 139
           PSGSQ  XXXXXXXXXXXXXXXXXXXXFIVDGATDIPDEDENRRMHRRPLLPREDEQEDV
Sbjct: 80  PSGSQFLXXXXXXXXXXXXXXXXXXXXFIVDGATDIPDEDENRRMHRRPLLPREDEQEDV 139

Query: 140 EALERRIQARYARSNHMEYDEETTEVEQQALLPSVRDPKLWMVKCAIGHEREAAVCLMQK 199
           EALERRIQARYARSNHMEYDEETTEVEQQALLPSVRDPKLWMVKCAIGHEREAAVCLMQK
Sbjct: 140 EALERRIQARYARSNHMEYDEETTEVEQQALLPSVRDPKLWMVKCAIGHEREAAVCLMQK 199

Query: 200 CIDRGPEMQIRSAIALDHLKNFIYIEADKEAHVREACKGLRNIYSQKVMLVPIKEMTDVL 259
           CIDRGPEMQIRSAIALDHLKNFIYIEADKEAHVREACKGLRNIYSQKVMLVPIKEMTDVL
Sbjct: 200 CIDRGPEMQIRSAIALDHLKNFIYIEADKEAHVREACKGLRNIYSQKVMLVPIKEMTDVL 259

Query: 260 SVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE 319
           SVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE
Sbjct: 260 SVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE 319

Query: 320 VAKKKAFVPPPRFMNIDEARELHIRVERRRDPITGEYFENIGGMFFKDGFLYKTVSMKSI 379
           VAKKKAFVPPPRFMNIDEARELHIRVERRRDPITGEYFENIGGMFFKDGFLYKTVSMKSI
Sbjct: 320 VAKKKAFVPPPRFMNIDEARELHIRVERRRDPITGEYFENIGGMFFKDGFLYKTVSMKSI 379

Query: 380 SAQNIKPTFDELEKFRKPGENGDGDIASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGW 439
           SAQNIKPTFDELEKFRKPGENGDGDIASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGW
Sbjct: 380 SAQNIKPTFDELEKFRKPGENGDGDIASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGW 439

Query: 440 VEKVEEENVHIRPEMKGLPKTLAVNERELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHV 499
           VEKVEEENVHIRPEMKGLPKTLAVNERELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHV
Sbjct: 440 VEKVEEENVHIRPEMKGLPKTLAVNERELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHV 499

Query: 500 LIILSDTTKEHIRVFADDVVESSEVTTGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQ 559
           LIILSDTTKEHIRVFADDVVESSEVTTGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQ
Sbjct: 500 LIILSDTTKEHIRVFADDVVESSEVTTGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQ 559

Query: 560 VLKGIPDRPEVDIVKLREIKSKIDKKISVQDRHNNTISAKDIVRILEGPCKGKQGPVEHI 619
           VLKGIPDRPEVDIVKLREIKSKIDKKISVQDRHNNTISAKDIVRILEGPCKGKQGPVEHI
Sbjct: 560 VLKGIPDRPEVDIVKLREIKSKIDKKISVQDRHNNTISAKDIVRILEGPCKGKQGPVEHI 619

Query: 620 YRGVLFIYDRHHLEHAGFICVKSHSCVVVGGSRTNGNRNGNSYSRLAGLGAPPRFPQSPK 679
           YRGVLFIYDRHHLEHAGFICVKSHSCVVVGGSRTNGNRNGNSYSRLAGLGAPPRFPQSPK
Sbjct: 620 YRGVLFIYDRHHLEHAGFICVKSHSCVVVGGSRTNGNRNGNSYSRLAGLGAPPRFPQSPK 679

Query: 680 RFSRGGPPNDSGGRHRGGRGHHDGLVGSTVKVRQGPYKGYRGRVVEIKGQLVRVELESQM 739
           RFSRGGPPNDSGGRHRGGRGHHDGLVGSTVKVRQGPYKGYRGRVVEIKGQLVRVELESQM
Sbjct: 680 RFSRGGPPNDSGGRHRGGRGHHDGLVGSTVKVRQGPYKGYRGRVVEIKGQLVRVELESQM 739

Query: 740 KVVTGIGIFSINTIILVLFAVDRNFISDNVAVSTPYRDTSRYGMGSETPMHPXXXXXXXX 799
           KVVT                VDRNFISDNVAVSTPYRDTSRYGMGSETPMHPXXXXXXXX
Sbjct: 740 KVVT----------------VDRNFISDNVAVSTPYRDTSRYGMGSETPMHPXXXXXXXX 799

Query: 800 XXXXXXXGTTPSHDGMRTPMRNRAWNPYAPMSPSR 835
           XXXXXXXGTTPSHDGMRTPMRNRAWNPYAPMSPSR
Sbjct: 800 XXXXXXXGTTPSHDGMRTPMRNRAWNPYAPMSPSR 818

[Close]

BLAST of Carg15770 vs. NCBI nr
Match: XP_023529878.1 (putative transcription elongation factor SPT5 homolog 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1376.3 bits (3561), Expect = 0.0e+00
Identity = 735/755 (97.35%), Postives = 736/755 (97.48%), Query Frame = 0


Query: 80  PSGSQXXXXXXXXXXXXXXXXXXXXXXFIVDGATDIPDEDENRRMHRRPLLPREDEQEDV 139
           PSGSQ  XXXXXXXXXXXXXXXXXXXXFIVDGATDIPDEDENRRMHRRPLLPREDEQEDV
Sbjct: 80  PSGSQFLXXXXXXXXXXXXXXXXXXXXFIVDGATDIPDEDENRRMHRRPLLPREDEQEDV 139

Query: 140 EALERRIQARYARSNHMEYDEETTEVEQQALLPSVRDPKLWMVKCAIGHEREAAVCLMQK 199
           EALERRIQARYARSNHMEYDEETTEVEQQALLPSVRDPKLWMVKCAIGHEREAAVCLMQK
Sbjct: 140 EALERRIQARYARSNHMEYDEETTEVEQQALLPSVRDPKLWMVKCAIGHEREAAVCLMQK 199

Query: 200 CIDRGPEMQIRSAIALDHLKNFIYIEADKEAHVREACKGLRNIYSQKVMLVPIKEMTDVL 259
           CIDRGPEMQIRSAIALDHLKNFIYIEADKEAHVREACKGLRNIYSQKVMLVPIKEMTDVL
Sbjct: 200 CIDRGPEMQIRSAIALDHLKNFIYIEADKEAHVREACKGLRNIYSQKVMLVPIKEMTDVL 259

Query: 260 SVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE 319
           SVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE
Sbjct: 260 SVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE 319

Query: 320 VAKKKAFVPPPRFMNIDEARELHIRVERRRDPITGEYFENIGGMFFKDGFLYKTVSMKSI 379
           VAKKKAFVPPPRFMNIDEARELHIRVERRRDPITGEYFENIGGMFFKDGFLYKTVSMKSI
Sbjct: 320 VAKKKAFVPPPRFMNIDEARELHIRVERRRDPITGEYFENIGGMFFKDGFLYKTVSMKSI 379

Query: 380 SAQNIKPTFDELEKFRKPGENGDGDIASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGW 439
           SAQNIKPTFDELEKFRKPGENGDGDIASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGW
Sbjct: 380 SAQNIKPTFDELEKFRKPGENGDGDIASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGW 439

Query: 440 VEKVEEENVHIRPEMKGLPKTLAVNERELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHV 499
           VEKVEEENVHIRPEMKGLPKTLAVNERELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHV
Sbjct: 440 VEKVEEENVHIRPEMKGLPKTLAVNERELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHV 499

Query: 500 LIILSDTTKEHIRVFADDVVESSEVTTGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQ 559
           LIILSDTTKEHIRVFADDVVESSEVTTGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQ
Sbjct: 500 LIILSDTTKEHIRVFADDVVESSEVTTGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQ 559

Query: 560 VLKGIPDRPEVDIVKLREIKSKIDKKISVQDRHNNTISAKDIVRILEGPCKGKQGPVEHI 619
           VLKGIPDRPEVDIVKLREIKSKIDKKISVQDRHNNTISAKDIVRILEGPCKGKQGPVEHI
Sbjct: 560 VLKGIPDRPEVDIVKLREIKSKIDKKISVQDRHNNTISAKDIVRILEGPCKGKQGPVEHI 619

Query: 620 YRGVLFIYDRHHLEHAGFICVKSHSCVVVGGSRTNGNRNGNSYSRLAGLGAPPRFPQSPK 679
           YRGVLFIYDRHHLEHAGFICVKSHSCVVVGGSRTNGNRNGNSYSRLAGLGAPPRFPQSPK
Sbjct: 620 YRGVLFIYDRHHLEHAGFICVKSHSCVVVGGSRTNGNRNGNSYSRLAGLGAPPRFPQSPK 679

Query: 680 RFSRGGPPNDSGGRHRGGRGHHDGLVGSTVKVRQGPYKGYRGRVVEIKGQLVRVELESQM 739
           RFSRGGPPNDSGGR+RGGRGHHDGLVGSTVKVRQGPYKGYRGRVVEIKGQLVRVELESQM
Sbjct: 680 RFSRGGPPNDSGGRNRGGRGHHDGLVGSTVKVRQGPYKGYRGRVVEIKGQLVRVELESQM 739

Query: 740 KVVTGIGIFSINTIILVLFAVDRNFISDNVAVSTPYRDTSRYGMGSETPMHPXXXXXXXX 799
           KVVT                VDRNFISDNVAVSTPYRDTSRYGMGSETPMHPXXXXXXXX
Sbjct: 740 KVVT----------------VDRNFISDNVAVSTPYRDTSRYGMGSETPMHPXXXXXXXX 799

Query: 800 XXXXXXXGTTPSHDGMRTPMRNRAWNPYAPMSPSR 835
           XXXXXX GTTPSHDGMRTPMRNRAWNPYAPMSPSR
Sbjct: 800 XXXXXXMGTTPSHDGMRTPMRNRAWNPYAPMSPSR 818

[Close]

BLAST of Carg15770 vs. NCBI nr
Match: XP_022989759.1 (putative transcription elongation factor SPT5 homolog 1 [Cucurbita maxima])

HSP 1 Score: 1370.1 bits (3545), Expect = 0.0e+00
Identity = 731/755 (96.82%), Postives = 733/755 (97.09%), Query Frame = 0


Query: 80  PSGSQXXXXXXXXXXXXXXXXXXXXXXFIVDGATDIPDEDENRRMHRRPLLPREDEQEDV 139
           PSGSQ  XXXXXXXXXXXXXXXXXXXXFIVDGATDIPDEDENRRMHRRPLLPREDEQEDV
Sbjct: 80  PSGSQFLXXXXXXXXXXXXXXXXXXXXFIVDGATDIPDEDENRRMHRRPLLPREDEQEDV 139

Query: 140 EALERRIQARYARSNHMEYDEETTEVEQQALLPSVRDPKLWMVKCAIGHEREAAVCLMQK 199
           EALERRIQARYARSNHMEYDEETTEVEQQALLPSVRDPKLWMVKCAIGHEREAAVCLMQK
Sbjct: 140 EALERRIQARYARSNHMEYDEETTEVEQQALLPSVRDPKLWMVKCAIGHEREAAVCLMQK 199

Query: 200 CIDRGPEMQIRSAIALDHLKNFIYIEADKEAHVREACKGLRNIYSQKVMLVPIKEMTDVL 259
           CIDRGPEMQIRSAIALDHLKNFIYIEADKEAHVREACKGLRNIYSQKVMLVPIKEMTDVL
Sbjct: 200 CIDRGPEMQIRSAIALDHLKNFIYIEADKEAHVREACKGLRNIYSQKVMLVPIKEMTDVL 259

Query: 260 SVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE 319
           SVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE
Sbjct: 260 SVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE 319

Query: 320 VAKKKAFVPPPRFMNIDEARELHIRVERRRDPITGEYFENIGGMFFKDGFLYKTVSMKSI 379
           VAKKKAFVPPPRFMNIDEARELHIRVERRRDPITGEYFENIGGMFFKDGFLYKTVSMKSI
Sbjct: 320 VAKKKAFVPPPRFMNIDEARELHIRVERRRDPITGEYFENIGGMFFKDGFLYKTVSMKSI 379

Query: 380 SAQNIKPTFDELEKFRKPGENGDGDIASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGW 439
           SAQNIKPTFDELEKFRKPGENGDGDIASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGW
Sbjct: 380 SAQNIKPTFDELEKFRKPGENGDGDIASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGW 439

Query: 440 VEKVEEENVHIRPEMKGLPKTLAVNERELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHV 499
           VEKVEEENVHIRPEMKGLPKTLAVNERELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHV
Sbjct: 440 VEKVEEENVHIRPEMKGLPKTLAVNERELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHV 499

Query: 500 LIILSDTTKEHIRVFADDVVESSEVTTGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQ 559
           LIILSDTTKEHIRVFADDVVESSEVTTGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQ
Sbjct: 500 LIILSDTTKEHIRVFADDVVESSEVTTGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQ 559

Query: 560 VLKGIPDRPEVDIVKLREIKSKIDKKISVQDRHNNTISAKDIVRILEGPCKGKQGPVEHI 619
           VLKGIPDRPEVDIVKLREIKSKIDKKISVQDRHNNTISAKDIVRILEGPCKGKQGPVEHI
Sbjct: 560 VLKGIPDRPEVDIVKLREIKSKIDKKISVQDRHNNTISAKDIVRILEGPCKGKQGPVEHI 619

Query: 620 YRGVLFIYDRHHLEHAGFICVKSHSCVVVGGSRTNGNRNGNSYSRLAGLGAPPRFPQSPK 679
           YRGVLFIYDRHHLEHAGFICVKSHSC+VVGGSRTNGNRNGNSYSRLAGLGAPPRFPQSPK
Sbjct: 620 YRGVLFIYDRHHLEHAGFICVKSHSCIVVGGSRTNGNRNGNSYSRLAGLGAPPRFPQSPK 679

Query: 680 RFSRGGPPNDSGGRHRGGRGHHDGLVGSTVKVRQGPYKGYRGRVVEIKGQLVRVELESQM 739
           RFSRGGPPND+GGRHRGGRGHHDGLVGSTVKVRQGPYKGYRGRVVEIKG LVRVELESQM
Sbjct: 680 RFSRGGPPNDTGGRHRGGRGHHDGLVGSTVKVRQGPYKGYRGRVVEIKGPLVRVELESQM 739

Query: 740 KVVTGIGIFSINTIILVLFAVDRNFISDNVAVSTPYRDTSRYGMGSETPMHPXXXXXXXX 799
           KVVT                VDRN ISDNVAVSTPYRD SRYGMGSETPMHPXXXXXXXX
Sbjct: 740 KVVT----------------VDRNSISDNVAVSTPYRDASRYGMGSETPMHPXXXXXXXX 799

Query: 800 XXXXXXXGTTPSHDGMRTPMRNRAWNPYAPMSPSR 835
           XXXXXX GTTPSHDGMRTPMRNRAWNPYAPMSPSR
Sbjct: 800 XXXXXXMGTTPSHDGMRTPMRNRAWNPYAPMSPSR 818

[Close]

BLAST of Carg15770 vs. NCBI nr
Match: XP_022141427.1 (putative transcription elongation factor SPT5 homolog 1 isoform X2 [Momordica charantia])

HSP 1 Score: 1328.2 bits (3436), Expect = 0.0e+00
Identity = 683/727 (93.95%), Postives = 695/727 (95.60%), Query Frame = 0


Query: 108 IVDGATDIPDEDENRRMHRRPLLPREDEQEDVEALERRIQARYARSNHMEYDEETTEVEQ 167
           IVD A DIPDEDE+RRMHRRPLLPREDEQEDVEALERRIQARYARSNHMEYDEETTEVEQ
Sbjct: 111 IVDSAADIPDEDESRRMHRRPLLPREDEQEDVEALERRIQARYARSNHMEYDEETTEVEQ 170

Query: 168 QALLPSVRDPKLWMVKCAIGHEREAAVCLMQKCIDRGPEMQIRSAIALDHLKNFIYIEAD 227
           QALLPSVRDPKLWMVKCAIG EREAAVCLMQKC+DRGPEMQIRSAIALDHLKN+IYIEAD
Sbjct: 171 QALLPSVRDPKLWMVKCAIGREREAAVCLMQKCLDRGPEMQIRSAIALDHLKNYIYIEAD 230

Query: 228 KEAHVREACKGLRNIYSQKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAK 287
           KEAHVREACKGLRNIYSQKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAK
Sbjct: 231 KEAHVREACKGLRNIYSQKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAK 290

Query: 288 VVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNIDEARELHIRVER 347
           VVDVDNVRQRVTVKLIPRIDLQALANKLEGREV KKKAFVPPPRFMNIDEARELHIRVER
Sbjct: 291 VVDVDNVRQRVTVKLIPRIDLQALANKLEGREVGKKKAFVPPPRFMNIDEARELHIRVER 350

Query: 348 RRDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGDIAS 407
           RRDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGDIAS
Sbjct: 351 RRDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGDIAS 410

Query: 408 LSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNERE 467
           LSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNERE
Sbjct: 411 LSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNERE 470

Query: 468 LCKYFEPGNHVKVVTGTQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVTTG 527
           LCKYFEPGNHVKVV+G+QEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVTTG
Sbjct: 471 LCKYFEPGNHVKVVSGSQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVTTG 530

Query: 528 VTKIGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGIPDRPEVDIVKLREIKSKIDKKIS 587
           VT+IGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGIPDRPEVDIVKLREIKSKIDKKIS
Sbjct: 531 VTRIGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGIPDRPEVDIVKLREIKSKIDKKIS 590

Query: 588 VQDRHNNTISAKDIVRILEGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFICVKSHSCVV 647
           VQDR NNT+S+KD+VRILEGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFIC KS SCVV
Sbjct: 591 VQDRFNNTVSSKDVVRILEGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFICAKSQSCVV 650

Query: 648 VGGSRTNGNRNGNSYSRLAGLGAPPRFPQSPKRFSRGGPPNDSGGRHRGGRGHHDGLVGS 707
           VGGSRTNGNRNGNSYSR AGLGAPPR PQSPKRF RGGPPNDSGGRHRGGRGHHDGLVGS
Sbjct: 651 VGGSRTNGNRNGNSYSRFAGLGAPPRLPQSPKRFPRGGPPNDSGGRHRGGRGHHDGLVGS 710

Query: 708 TVKVRQGPYKGYRGRVVEIKGQLVRVELESQMKVVTGIGIFSINTIILVLFAVDRNFISD 767
           TVKVRQGPYKGYRGRVVE+KGQ+VRVELESQMKVVT                VDRNFISD
Sbjct: 711 TVKVRQGPYKGYRGRVVELKGQMVRVELESQMKVVT----------------VDRNFISD 770

Query: 768 NVAVSTPYRDTSRYGMGSETPMHPXXXXXXXXXXXXXXXGTTPSHDGMRTPMRNRAWNPY 827
           NVAVSTPYRD SRYGMGSETPMHPXXXXXXXXXXXXX  G TP  DGMRTPMR+RAWNPY
Sbjct: 771 NVAVSTPYRDASRYGMGSETPMHPXXXXXXXXXXXXXDSGATPFLDGMRTPMRDRAWNPY 821

Query: 828 APMSPSR 835
           APMSPSR
Sbjct: 831 APMSPSR 821

[Close]

BLAST of Carg15770 vs. NCBI nr
Match: XP_022141426.1 (putative transcription elongation factor SPT5 homolog 1 isoform X1 [Momordica charantia])

HSP 1 Score: 1328.2 bits (3436), Expect = 0.0e+00
Identity = 683/727 (93.95%), Postives = 695/727 (95.60%), Query Frame = 0


Query: 108 IVDGATDIPDEDENRRMHRRPLLPREDEQEDVEALERRIQARYARSNHMEYDEETTEVEQ 167
           IVD A DIPDEDE+RRMHRRPLLPREDEQEDVEALERRIQARYARSNHMEYDEETTEVEQ
Sbjct: 111 IVDSAADIPDEDESRRMHRRPLLPREDEQEDVEALERRIQARYARSNHMEYDEETTEVEQ 170

Query: 168 QALLPSVRDPKLWMVKCAIGHEREAAVCLMQKCIDRGPEMQIRSAIALDHLKNFIYIEAD 227
           QALLPSVRDPKLWMVKCAIG EREAAVCLMQKC+DRGPEMQIRSAIALDHLKN+IYIEAD
Sbjct: 171 QALLPSVRDPKLWMVKCAIGREREAAVCLMQKCLDRGPEMQIRSAIALDHLKNYIYIEAD 230

Query: 228 KEAHVREACKGLRNIYSQKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAK 287
           KEAHVREACKGLRNIYSQKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAK
Sbjct: 231 KEAHVREACKGLRNIYSQKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAK 290

Query: 288 VVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNIDEARELHIRVER 347
           VVDVDNVRQRVTVKLIPRIDLQALANKLEGREV KKKAFVPPPRFMNIDEARELHIRVER
Sbjct: 291 VVDVDNVRQRVTVKLIPRIDLQALANKLEGREVGKKKAFVPPPRFMNIDEARELHIRVER 350

Query: 348 RRDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGDIAS 407
           RRDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGDIAS
Sbjct: 351 RRDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGDIAS 410

Query: 408 LSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNERE 467
           LSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNERE
Sbjct: 411 LSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNERE 470

Query: 468 LCKYFEPGNHVKVVTGTQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVTTG 527
           LCKYFEPGNHVKVV+G+QEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVTTG
Sbjct: 471 LCKYFEPGNHVKVVSGSQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVTTG 530

Query: 528 VTKIGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGIPDRPEVDIVKLREIKSKIDKKIS 587
           VT+IGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGIPDRPEVDIVKLREIKSKIDKKIS
Sbjct: 531 VTRIGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGIPDRPEVDIVKLREIKSKIDKKIS 590

Query: 588 VQDRHNNTISAKDIVRILEGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFICVKSHSCVV 647
           VQDR NNT+S+KD+VRILEGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFIC KS SCVV
Sbjct: 591 VQDRFNNTVSSKDVVRILEGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFICAKSQSCVV 650

Query: 648 VGGSRTNGNRNGNSYSRLAGLGAPPRFPQSPKRFSRGGPPNDSGGRHRGGRGHHDGLVGS 707
           VGGSRTNGNRNGNSYSR AGLGAPPR PQSPKRF RGGPPNDSGGRHRGGRGHHDGLVGS
Sbjct: 651 VGGSRTNGNRNGNSYSRFAGLGAPPRLPQSPKRFPRGGPPNDSGGRHRGGRGHHDGLVGS 710

Query: 708 TVKVRQGPYKGYRGRVVEIKGQLVRVELESQMKVVTGIGIFSINTIILVLFAVDRNFISD 767
           TVKVRQGPYKGYRGRVVE+KGQ+VRVELESQMKVVT                VDRNFISD
Sbjct: 711 TVKVRQGPYKGYRGRVVELKGQMVRVELESQMKVVT----------------VDRNFISD 770

Query: 768 NVAVSTPYRDTSRYGMGSETPMHPXXXXXXXXXXXXXXXGTTPSHDGMRTPMRNRAWNPY 827
           NVAVSTPYRD SRYGMGSETPMHPXXXXXXXXXXXXX  G TP  DGMRTPMR+RAWNPY
Sbjct: 771 NVAVSTPYRDASRYGMGSETPMHPXXXXXXXXXXXXXDSGATPFLDGMRTPMRDRAWNPY 821

Query: 828 APMSPSR 835
           APMSPSR
Sbjct: 831 APMSPSR 821

[Close]

BLAST of Carg15770 vs. TAIR10
Match: AT4G08350.1 (global transcription factor group A2)

HSP 1 Score: 988.4 bits (2554), Expect = 2.7e-288
Identity = 524/676 (77.51%), Postives = 576/676 (85.21%), Query Frame = 0


Query: 165 VEQQALLPSVRDPKLWMVKCAIGHEREAAVCLMQKCIDRGPEMQIRSAIALDHLKNFIYI 224
           VEQQALLPSVRDPKLWMVKCAIG ERE AVCLMQK IDRG ++QIRS +ALDHLKNFIY+
Sbjct: 170 VEQQALLPSVRDPKLWMVKCAIGREREVAVCLMQKFIDRGADLQIRSVVALDHLKNFIYV 229

Query: 225 EADKEAHVREACKGLRNIY-SQKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKG 284
           EADKEAHV+EA KG+RNIY +QK++LVPI+EMTDVLSVESKAIDLSRDTWVRMKIGTYKG
Sbjct: 230 EADKEAHVKEAIKGMRNIYANQKILLVPIREMTDVLSVESKAIDLSRDTWVRMKIGTYKG 289

Query: 285 DLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNIDEARELHI 344
           DLAKVVDVDNVRQRVTVKLIPRIDLQALA+KL+GREV+KKKAFVPPPRFMNIDEARELHI
Sbjct: 290 DLAKVVDVDNVRQRVTVKLIPRIDLQALASKLDGREVSKKKAFVPPPRFMNIDEARELHI 349

Query: 345 RVERRRDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDG 404
           RVERRRD +TG+YFENIGGM FKDGF YK VS+KSI+ QN+ PTFDELEKF KP ENG+G
Sbjct: 350 RVERRRDHMTGDYFENIGGMLFKDGFHYKQVSLKSITVQNVTPTFDELEKFNKPSENGEG 409

Query: 405 DIASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAV 464
           D   LSTLFANRKKGHFMKGDAVIV+KGDLKNLKGWVEKV+EENV IR E+KGLP  LAV
Sbjct: 410 DFGGLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVLIRSEVKGLPDPLAV 469

Query: 465 NERELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSE 524
           NERELCKYFEPGNHVKVV+GT EGATGMVVKV+QHVLIILSDTTKEH+RVFAD VVESSE
Sbjct: 470 NERELCKYFEPGNHVKVVSGTHEGATGMVVKVDQHVLIILSDTTKEHVRVFADHVVESSE 529

Query: 525 VTTGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGIPDRPEVDIVKLREIKSKID 584
           VTTGVTKIGDYELHDLVLLDN+SFGVIIR+E+EAFQVLKG+PDRPEV +VKLREIK K++
Sbjct: 530 VTTGVTKIGDYELHDLVLLDNLSFGVIIRLENEAFQVLKGVPDRPEVALVKLREIKCKLE 589

Query: 585 KKISVQDRHNNTISAKDIVRILEGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFICVKSH 644
           KKI+VQDR+ N I+ KD VR++EGP KGKQGPV+HIY+GVLFIYDRHHLEHAGFIC K  
Sbjct: 590 KKINVQDRYKNVIAVKDDVRVIEGPSKGKQGPVKHIYKGVLFIYDRHHLEHAGFICAKCT 649

Query: 645 SCVVVGGSRTNGNRN-GNSYSRLAGLGAPPRFPQSPKRF--SRGGPPNDSG--GRHRGGR 704
           SC+VVGGSR+  NRN G+S SR     AP   P SP RF   RGG  N+SG       GR
Sbjct: 650 SCIVVGGSRSGANRNGGDSLSRYGNFKAPAPVPSSPGRFQRGRGGGYNNSGXXXXXXXGR 709

Query: 705 GHHDGLVGSTVKVRQGPYKGYRGRVVEIKGQLVRVELESQMKVVTGIGIFSINTIILVLF 764
           G  D L+G+TVK+R GP+KGYRG VVE+KG  VRVELE  MK+VT               
Sbjct: 710 G-DDSLLGTTVKIRLGPFKGYRGPVVEVKGNSVRVELE--MKIVT--------------- 769

Query: 765 AVDRNFISDNVAVSTPYRDTSRYGMGSETPMHPXXXXXXXXXXXXXXXGTTPSHDGMRTP 824
            VDR  ISDNVA +TP+RDTSRY MGSETPMHPXXXXXXXXXXXXX  G TP HDGM   
Sbjct: 770 -VDRGAISDNVA-TTPFRDTSRYSMGSETPMHPXXXXXXXXXXXXXDSGATPIHDGMXXX 825

Query: 825 MRNRAWNPYAPMSPSR 835
             +RAWNPY PMSP R
Sbjct: 830 XXDRAWNPYTPMSPPR 825

[Close]

BLAST of Carg15770 vs. TAIR10
Match: AT2G34210.1 (Transcription elongation factor Spt5)

HSP 1 Score: 889.8 bits (2298), Expect = 1.3e-258
Identity = 489/741 (65.99%), Postives = 573/741 (77.33%), Query Frame = 0


Query: 107 FIVDGATDIPDEDENRRMHRRPLLPR--EDEQEDVEALER----RIQARYARSNHMEYDE 166
           FIV G  D+P+ED +   HRR    R     +EDV+ LE+    R+  +YA+ ++ E D 
Sbjct: 98  FIVSGEADLPNEDSD---HRRQYYQRGFHPHEEDVDELEKRTLERLSTKYAKDDY-ELD- 157

Query: 167 ETTEVEQQALLPSVRDPKLWMVKCAIGHEREAAVCLMQKCIDRGPEMQIRSAIALDHLKN 226
           +  +V+QQALLPSVRDPKLW+VKCAIG ERE AVCLMQK +DRG E +IRSAIALDHL+N
Sbjct: 158 DVNDVDQQALLPSVRDPKLWLVKCAIGREREVAVCLMQKIVDRGSEFKIRSAIALDHLQN 217

Query: 227 FIYIEADKEAHVREACKGLRNIY-SQKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIG 286
           ++YIEAD EAHV+EA KG+RNIY +QK++LVPIKEMT VLSVESKAIDLSRD+WVRMK+G
Sbjct: 218 YVYIEADMEAHVKEAIKGMRNIYANQKILLVPIKEMTAVLSVESKAIDLSRDSWVRMKLG 277

Query: 287 TYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNIDEAR 346
            YKGDLA+VVDVDNVR+RVTVKLIPRIDLQALANKLEG E  KKKAF PPPRFMNIDEAR
Sbjct: 278 IYKGDLAQVVDVDNVRKRVTVKLIPRIDLQALANKLEGTENVKKKAFAPPPRFMNIDEAR 337

Query: 347 ELHIRVERRRDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGE 406
           ELHIRVE RRDP+TG+YFENIGGM FKDGFLYK VS KSI+AQN+ PTFDELE+F++P E
Sbjct: 338 ELHIRVEHRRDPMTGDYFENIGGMLFKDGFLYKKVSTKSIAAQNVTPTFDELERFKRPNE 397

Query: 407 NGDGDIASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPK 466
           NG+ D    STLFANRKKGHFMKGDAVIV+KGDLKNLKGW+EKV+EENV IR EMK LP 
Sbjct: 398 NGEIDFVDESTLFANRKKGHFMKGDAVIVIKGDLKNLKGWIEKVDEENVLIRSEMKDLPN 457

Query: 467 TLAVNERELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVV 526
            +AVN RELCKYFEPGN VKVV+G  EG TGM+VKV+QH+LIILSDTTKEHI VFAD V 
Sbjct: 458 PIAVNGRELCKYFEPGNFVKVVSGIHEGGTGMIVKVDQHMLIILSDTTKEHICVFADHVA 517

Query: 527 ESSEVTTGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGIPDRPEVDIVKLREIK 586
           +S+EVT GVTKIGDYELHDLV+L + SFGVI++++SEA Q+LKG+PD  EV IVK  EIK
Sbjct: 518 KSAEVTKGVTKIGDYELHDLVILSDFSFGVILKLDSEAIQILKGVPDSSEVSIVKASEIK 577

Query: 587 SKIDKKISVQDRHNNTISAKDIVRILEGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFIC 646
            KI KKI+VQDR+ N ++ KD+VR++EGP KGKQGPV  IY+GVLFI+DRH+LEH GFIC
Sbjct: 578 YKIWKKINVQDRYKNVVAVKDVVRVIEGPSKGKQGPVVQIYKGVLFIHDRHNLEHTGFIC 637

Query: 647 VKSHSCVVVGGSRTNGNRNGNSYSRLAGLGAPPRFPQSPKRFSRG--GPPNDSGGRHRGG 706
            +  SCV+ GG+                   P   P SP+RF R   G    +GGRH+GG
Sbjct: 638 TRCSSCVLAGGN----------------FKTPALVPPSPRRFQRADMGYNPGAGGRHQGG 697

Query: 707 RGHH--DGLVGSTVKVRQGPYKGYRGRVVEIKGQLVRVELESQMKVVTGIGIFSINTIIL 766
           RG    D LVG+ VK+R GP+KGY GR+VE+K +LVRVELE+  K+VT            
Sbjct: 698 RGRRGDDHLVGTYVKIRLGPFKGYSGRLVEVKDKLVRVELEA--KIVT------------ 757

Query: 767 VLFAVDRNFISD--NVAVSTPYRDTSRYGMGSETPMHPXXXXXXXXXXXXXXXGTTPSHD 826
               V+R  ISD  +  V+TP     +Y MGS+TPMHPXXXXXXXXXXXXXXX      D
Sbjct: 758 ----VERKAISDMTDNVVATP-----QYNMGSQTPMHPXXXXXXXXXXXXXXXXXXXXXD 794

Query: 827 GMRTPMRNRAWNPYAPMSPSR 835
           GMRTPMR RAWNPY PMSP R
Sbjct: 818 GMRTPMRGRAWNPYMPMSPPR 794

[Close]

BLAST of Carg15770 vs. TAIR10
Match: AT5G04290.1 (kow domain-containing transcription factor 1)

HSP 1 Score: 268.9 bits (686), Expect = 1.1e-71
Identity = 192/626 (30.67%), Postives = 296/626 (47.28%), Query Frame = 0


Query: 129 LLPREDEQEDVEALERRIQARY-ARSNHMEY--DEETTEVEQQALLPSVRDPKLWMVKCA 188
           + P+E++  + E  +R ++ RY   S  + Y  D+    +E  AL P+ +DP +W VKCA
Sbjct: 96  VFPKEEDLNE-EEFDRIMEERYKPGSGFLRYADDDIKDAIEMDALAPTSKDPPIWKVKCA 155

Query: 189 IGHEREAAVCLMQKCIDR---GPEMQIRSAIALDHLKNFIYIEADKEAHVREACKGLRNI 248
           IG ER +  CLM K ++    G +++I S  ++DH+K FI+IEADKE  V EACK L  I
Sbjct: 156 IGRERRSVFCLMHKFVELRKIGTKLEIISVFSVDHVKGFIFIEADKEHDVLEACKSLVGI 215

Query: 249 YSQKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKL 308
           Y+ +++L+P  E  ++L+V+ K   +S  TW R+K G YKGDLA++V V + R +  +KL
Sbjct: 216 YATRMVLLPKAETPNLLTVQKKTKKVSEGTWARVKNGKYKGDLAQIVAVSDTRNKALIKL 275

Query: 309 IPRIDLQALANKLEGREVAKKKAFVPPPRFMNIDEARELHIRVERRRDPITGEYFENIGG 368
           IPRID+QAL  K  G  V  +K   P PR ++  E  E    ++ RRD  TG  FE++  
Sbjct: 276 IPRIDIQALTQKY-GGGVTVQKGQTPAPRLISSSELEEFRPLIQVRRDRDTGITFEHLDS 335

Query: 369 MFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGDIASLSTLFANRKKGHFMK 428
           +  KDG+LYK VS+ SIS+  + PT DEL KF        GD+  +S ++   +K     
Sbjct: 336 LMLKDGYLYKKVSLDSISSWGVIPTKDELLKFTPVDRKETGDVEWISEIYGEERK----- 395

Query: 429 GDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNERELCKYFEPGNHVKVVT 488
                                                                   K++ 
Sbjct: 396 -------------------------------------------------------KKILP 455

Query: 489 GTQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVTTGVTKIGDYELHDLVLL 548
             +EG  G                                             L++LV  
Sbjct: 456 TCREGGKGEG--------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYNLVCF 515

Query: 549 DNMSFGVIIRVE--SEAFQVLKGIPDRPEVDIVKLREIKS-KIDKKISVQDRHNNTISAK 608
               FG+I+ V+   + ++VLK   D P V  V  +E+++   D K +  D +   IS  
Sbjct: 516 SRKDFGLIVGVDDKGDGYKVLKEGIDGPVVVTVGKKEMQNGPFDSKFTALDLNKKQISVN 575

Query: 609 DIVRILEGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFICVKSHSC--VVVGGSRTNGNR 668
           D+V+I +GP +GKQG V  +YRG++F+YD    E+ G+ C KS SC  V +    +N   
Sbjct: 576 DVVKISKGPSEGKQGVVRQVYRGIIFLYDESEEENGGYFCCKSQSCEKVKLFTEESNEKT 635

Query: 669 NGNSYSRLAGLGAPPRFPQSPKRFSRGGPPNDSGGRHRGGRGHHDGLVGSTVKVRQGPYK 728
            G   +      + P+ P SP++     P       ++G  G     +G  +++R GP K
Sbjct: 636 GGFDGTAFEDFVSSPKSPLSPEK--EWQPRERYNSSNQGDIGSTYS-IGQKLRIRVGPLK 648

Query: 729 GYRGRVVEIKGQLVRVELESQMKVVT 744
           GY  RV+ ++   V V+L+SQ K+ T
Sbjct: 696 GYLCRVIALRYSDVTVKLDSQHKIFT 648

[Close]

BLAST of Carg15770 vs. Swiss-Prot
Match: sp|Q9STN3|SPT51_ARATH (Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4g08350 PE=1 SV=2)

HSP 1 Score: 988.4 bits (2554), Expect = 4.8e-287
Identity = 524/676 (77.51%), Postives = 576/676 (85.21%), Query Frame = 0


Query: 165 VEQQALLPSVRDPKLWMVKCAIGHEREAAVCLMQKCIDRGPEMQIRSAIALDHLKNFIYI 224
           VEQQALLPSVRDPKLWMVKCAIG ERE AVCLMQK IDRG ++QIRS +ALDHLKNFIY+
Sbjct: 170 VEQQALLPSVRDPKLWMVKCAIGREREVAVCLMQKFIDRGADLQIRSVVALDHLKNFIYV 229

Query: 225 EADKEAHVREACKGLRNIY-SQKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKG 284
           EADKEAHV+EA KG+RNIY +QK++LVPI+EMTDVLSVESKAIDLSRDTWVRMKIGTYKG
Sbjct: 230 EADKEAHVKEAIKGMRNIYANQKILLVPIREMTDVLSVESKAIDLSRDTWVRMKIGTYKG 289

Query: 285 DLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNIDEARELHI 344
           DLAKVVDVDNVRQRVTVKLIPRIDLQALA+KL+GREV+KKKAFVPPPRFMNIDEARELHI
Sbjct: 290 DLAKVVDVDNVRQRVTVKLIPRIDLQALASKLDGREVSKKKAFVPPPRFMNIDEARELHI 349

Query: 345 RVERRRDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDG 404
           RVERRRD +TG+YFENIGGM FKDGF YK VS+KSI+ QN+ PTFDELEKF KP ENG+G
Sbjct: 350 RVERRRDHMTGDYFENIGGMLFKDGFHYKQVSLKSITVQNVTPTFDELEKFNKPSENGEG 409

Query: 405 DIASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAV 464
           D   LSTLFANRKKGHFMKGDAVIV+KGDLKNLKGWVEKV+EENV IR E+KGLP  LAV
Sbjct: 410 DFGGLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVLIRSEVKGLPDPLAV 469

Query: 465 NERELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSE 524
           NERELCKYFEPGNHVKVV+GT EGATGMVVKV+QHVLIILSDTTKEH+RVFAD VVESSE
Sbjct: 470 NERELCKYFEPGNHVKVVSGTHEGATGMVVKVDQHVLIILSDTTKEHVRVFADHVVESSE 529

Query: 525 VTTGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGIPDRPEVDIVKLREIKSKID 584
           VTTGVTKIGDYELHDLVLLDN+SFGVIIR+E+EAFQVLKG+PDRPEV +VKLREIK K++
Sbjct: 530 VTTGVTKIGDYELHDLVLLDNLSFGVIIRLENEAFQVLKGVPDRPEVALVKLREIKCKLE 589

Query: 585 KKISVQDRHNNTISAKDIVRILEGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFICVKSH 644
           KKI+VQDR+ N I+ KD VR++EGP KGKQGPV+HIY+GVLFIYDRHHLEHAGFIC K  
Sbjct: 590 KKINVQDRYKNVIAVKDDVRVIEGPSKGKQGPVKHIYKGVLFIYDRHHLEHAGFICAKCT 649

Query: 645 SCVVVGGSRTNGNRN-GNSYSRLAGLGAPPRFPQSPKRF--SRGGPPNDSG--GRHRGGR 704
           SC+VVGGSR+  NRN G+S SR     AP   P SP RF   RGG  N+SG       GR
Sbjct: 650 SCIVVGGSRSGANRNGGDSLSRYGNFKAPAPVPSSPGRFQRGRGGGYNNSGXXXXXXXGR 709

Query: 705 GHHDGLVGSTVKVRQGPYKGYRGRVVEIKGQLVRVELESQMKVVTGIGIFSINTIILVLF 764
           G  D L+G+TVK+R GP+KGYRG VVE+KG  VRVELE  MK+VT               
Sbjct: 710 G-DDSLLGTTVKIRLGPFKGYRGPVVEVKGNSVRVELE--MKIVT--------------- 769

Query: 765 AVDRNFISDNVAVSTPYRDTSRYGMGSETPMHPXXXXXXXXXXXXXXXGTTPSHDGMRTP 824
            VDR  ISDNVA +TP+RDTSRY MGSETPMHPXXXXXXXXXXXXX  G TP HDGM   
Sbjct: 770 -VDRGAISDNVA-TTPFRDTSRYSMGSETPMHPXXXXXXXXXXXXXDSGATPIHDGMXXX 825

Query: 825 MRNRAWNPYAPMSPSR 835
             +RAWNPY PMSP R
Sbjct: 830 XXDRAWNPYTPMSPPR 825

[Close]

BLAST of Carg15770 vs. Swiss-Prot
Match: sp|O80770|SPT52_ARATH (Putative transcription elongation factor SPT5 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At2g34210 PE=3 SV=2)

HSP 1 Score: 889.8 bits (2298), Expect = 2.3e-257
Identity = 489/741 (65.99%), Postives = 573/741 (77.33%), Query Frame = 0


Query: 107 FIVDGATDIPDEDENRRMHRRPLLPR--EDEQEDVEALER----RIQARYARSNHMEYDE 166
           FIV G  D+P+ED +   HRR    R     +EDV+ LE+    R+  +YA+ ++ E D 
Sbjct: 98  FIVSGEADLPNEDSD---HRRQYYQRGFHPHEEDVDELEKRTLERLSTKYAKDDY-ELD- 157

Query: 167 ETTEVEQQALLPSVRDPKLWMVKCAIGHEREAAVCLMQKCIDRGPEMQIRSAIALDHLKN 226
           +  +V+QQALLPSVRDPKLW+VKCAIG ERE AVCLMQK +DRG E +IRSAIALDHL+N
Sbjct: 158 DVNDVDQQALLPSVRDPKLWLVKCAIGREREVAVCLMQKIVDRGSEFKIRSAIALDHLQN 217

Query: 227 FIYIEADKEAHVREACKGLRNIY-SQKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIG 286
           ++YIEAD EAHV+EA KG+RNIY +QK++LVPIKEMT VLSVESKAIDLSRD+WVRMK+G
Sbjct: 218 YVYIEADMEAHVKEAIKGMRNIYANQKILLVPIKEMTAVLSVESKAIDLSRDSWVRMKLG 277

Query: 287 TYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNIDEAR 346
            YKGDLA+VVDVDNVR+RVTVKLIPRIDLQALANKLEG E  KKKAF PPPRFMNIDEAR
Sbjct: 278 IYKGDLAQVVDVDNVRKRVTVKLIPRIDLQALANKLEGTENVKKKAFAPPPRFMNIDEAR 337

Query: 347 ELHIRVERRRDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGE 406
           ELHIRVE RRDP+TG+YFENIGGM FKDGFLYK VS KSI+AQN+ PTFDELE+F++P E
Sbjct: 338 ELHIRVEHRRDPMTGDYFENIGGMLFKDGFLYKKVSTKSIAAQNVTPTFDELERFKRPNE 397

Query: 407 NGDGDIASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPK 466
           NG+ D    STLFANRKKGHFMKGDAVIV+KGDLKNLKGW+EKV+EENV IR EMK LP 
Sbjct: 398 NGEIDFVDESTLFANRKKGHFMKGDAVIVIKGDLKNLKGWIEKVDEENVLIRSEMKDLPN 457

Query: 467 TLAVNERELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVV 526
            +AVN RELCKYFEPGN VKVV+G  EG TGM+VKV+QH+LIILSDTTKEHI VFAD V 
Sbjct: 458 PIAVNGRELCKYFEPGNFVKVVSGIHEGGTGMIVKVDQHMLIILSDTTKEHICVFADHVA 517

Query: 527 ESSEVTTGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGIPDRPEVDIVKLREIK 586
           +S+EVT GVTKIGDYELHDLV+L + SFGVI++++SEA Q+LKG+PD  EV IVK  EIK
Sbjct: 518 KSAEVTKGVTKIGDYELHDLVILSDFSFGVILKLDSEAIQILKGVPDSSEVSIVKASEIK 577

Query: 587 SKIDKKISVQDRHNNTISAKDIVRILEGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFIC 646
            KI KKI+VQDR+ N ++ KD+VR++EGP KGKQGPV  IY+GVLFI+DRH+LEH GFIC
Sbjct: 578 YKIWKKINVQDRYKNVVAVKDVVRVIEGPSKGKQGPVVQIYKGVLFIHDRHNLEHTGFIC 637

Query: 647 VKSHSCVVVGGSRTNGNRNGNSYSRLAGLGAPPRFPQSPKRFSRG--GPPNDSGGRHRGG 706
            +  SCV+ GG+                   P   P SP+RF R   G    +GGRH+GG
Sbjct: 638 TRCSSCVLAGGN----------------FKTPALVPPSPRRFQRADMGYNPGAGGRHQGG 697

Query: 707 RGHH--DGLVGSTVKVRQGPYKGYRGRVVEIKGQLVRVELESQMKVVTGIGIFSINTIIL 766
           RG    D LVG+ VK+R GP+KGY GR+VE+K +LVRVELE+  K+VT            
Sbjct: 698 RGRRGDDHLVGTYVKIRLGPFKGYSGRLVEVKDKLVRVELEA--KIVT------------ 757

Query: 767 VLFAVDRNFISD--NVAVSTPYRDTSRYGMGSETPMHPXXXXXXXXXXXXXXXGTTPSHD 826
               V+R  ISD  +  V+TP     +Y MGS+TPMHPXXXXXXXXXXXXXXX      D
Sbjct: 758 ----VERKAISDMTDNVVATP-----QYNMGSQTPMHPXXXXXXXXXXXXXXXXXXXXXD 794

Query: 827 GMRTPMRNRAWNPYAPMSPSR 835
           GMRTPMR RAWNPY PMSP R
Sbjct: 818 GMRTPMRGRAWNPYMPMSPPR 794

[Close]

BLAST of Carg15770 vs. Swiss-Prot
Match: sp|Q5ZI08|SPT5H_CHICK (Transcription elongation factor SPT5 OS=Gallus gallus OX=9031 GN=SUPT5H PE=2 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.3e-95
Identity = 247/714 (34.59%), Postives = 384/714 (53.78%), Query Frame = 0


Query: 110 DGATDIPDE-------------DENRRMHRRPLLPREDEQEDVEALERRIQARYARSNHM 169
           DGA DI ++             DE+R   RR      D++E  E L      +YA+S+  
Sbjct: 91  DGAEDILEKEEIEASNIDNVVLDEDRSGARRLQNLWRDQRE--EELGEYYMKKYAKSSVG 150

Query: 170 E-----YDEETTEVEQQALLPSVRDPKLWMVKCAIGHEREAAVCLMQKCID---RGPEMQ 229
           E      DE + ++ QQ LLP V+DP LW VKC IG ER  A+ LM+K I        +Q
Sbjct: 151 ETVYGGSDELSDDITQQQLLPGVKDPNLWTVKCKIGEERATAIALMRKFIAYQFTDTPLQ 210

Query: 230 IRSAIALDHLKNFIYIEADKEAHVREACKGLRNI----YSQKVMLVPIKEMTDVLSVESK 289
           I+S +A +H+K +IY+EA K+ HV++A +G+ N+    ++Q+  +VPIKEMTDVL V  +
Sbjct: 211 IKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRMGYWNQQ--MVPIKEMTDVLKVVKE 270

Query: 290 AIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VAKK 349
             +L   +WVR+K G YK D+A+V  V+  + ++++K+IPRID   +  ++  ++  AK+
Sbjct: 271 VTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNQISLKMIPRIDFDRIKARMSLKDWFAKR 330

Query: 350 KAFV-PPPRFMNIDEARELHIRVERRRDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQ 409
           K F  PP R  + ++ R L   V        G++    G  + + GFL+K+ +M ++  +
Sbjct: 331 KKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVITE 390

Query: 410 NIKPTFDELEKFRKPGENGDGDIASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEK 469
            +KPT  ELEKF    E  D ++ + ST     ++ +F  GD V V +G+L NL+G +  
Sbjct: 391 GVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKILS 450

Query: 470 VEEENVHIRPEMKGLPKTLAVNERELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHVLII 529
           V+   + I P+ + L   L    +EL KYF+ G+HVKV+ G  EG TG++V+VE++ +I+
Sbjct: 451 VDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVIL 510

Query: 530 LSDTTKEHIRVFADDVVESSEVTTGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQVLK 589
            SD T   ++V   D+   SE  +GV   G +E  +LV LD  + GVI+R+E E FQVL 
Sbjct: 511 FSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQVLN 570

Query: 590 GIPDRPEVDIVKLREIKSKIDKKISVQ-DRHNNTISAKDIVRILEGPCKGKQGPVEHIYR 649
                 +V  V+ + +  K D + +V  D   N I  KDIV++++GP  G++G + H++R
Sbjct: 571 MY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHLFR 630

Query: 650 GVLFIYDRHHLEHAGFICVKSHSCVVVGGSRTNG--NRNGNSYSRLAGLGAPPRFPQSPK 709
           G  F++ +  +E+ G    K+   V+ GGS+     N    S++ ++   + P  P    
Sbjct: 631 GFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVGSFAPMSPRISSPMHPSGAG 690

Query: 710 RFSRGGPPNDSGGRHRGGRGHHDG-LVGSTVKVRQGPYKGYRGRVVEIKGQLVRVELESQ 769
           +  RGG     GG    GRG  D  L+G TV++ QGPYKGY G V +      RVEL S 
Sbjct: 691 Q--RGG---FGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVKDATESTARVELHST 750

Query: 770 MKVVTGIGIFSINTIILVLFAVDRNFISDNVAVSTPYRDTSRYG----MGSETP 789
            + +                +VDR  ++  V    P   TS YG     GS+TP
Sbjct: 751 CQTI----------------SVDRQRLT-TVGSRRPGGMTSTYGRTPMYGSQTP 768

[Close]

BLAST of Carg15770 vs. Swiss-Prot
Match: sp|O55201|SPT5H_MOUSE (Transcription elongation factor SPT5 OS=Mus musculus OX=10090 GN=Supt5h PE=1 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 8.7e-95
Identity = 242/692 (34.97%), Postives = 375/692 (54.19%), Query Frame = 0


Query: 119 DENRRMHRRPLLPREDEQEDVEALERRIQARYARSNHME-----YDEETTEVEQQALLPS 178
           DE+R   RR      D++E  E L      +YA+S+  E      DE + ++ QQ LLP 
Sbjct: 114 DEDRSGARRLQNLWRDQRE--EELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPG 173

Query: 179 VRDPKLWMVKCAIGHEREAAVCLMQKCID---RGPEMQIRSAIALDHLKNFIYIEADKEA 238
           V+DP LW VKC IG ER  A+ LM+K I        +QI+S +A +H+K +IY+EA K+ 
Sbjct: 174 VKDPNLWTVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQT 233

Query: 239 HVREACKGLRNI----YSQKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLA 298
           HV++A +G+ N+    ++Q+  +VPIKEMTDVL V  +  +L   +WVR+K G YK D+A
Sbjct: 234 HVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIA 293

Query: 299 KVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VAKKKAFV-PPPRFMNIDEARELHIR 358
           +V  V+  +  +++K+IPRID   +  ++  ++  AK+K F  PP R  + ++ R L   
Sbjct: 294 QVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGD 353

Query: 359 VERRRDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGD 418
           V        G++    G  + + GFL+K+ +M ++  + +KPT  ELEKF    E  D +
Sbjct: 354 VAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLE 413

Query: 419 IASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVN 478
           + + ST     ++ +F  GD V V +G+L NL+G V  V+   + I P+ + L   L   
Sbjct: 414 VVTEST--GKEREHNFQPGDNVEVCEGELINLQGKVLSVDGNKITIMPKHEDLKDMLEFP 473

Query: 479 ERELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEV 538
            +EL KYF+ G+HVKV+ G  EG TG++V+VE++ +I+ SD T   ++V   D+   SE 
Sbjct: 474 AQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSET 533

Query: 539 TTGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGIPDRPEVDIVKLREIKSKIDK 598
            +GV   G +E  +LV LD  + GVI+R+E E FQVL       +V  V+ + +  K D 
Sbjct: 534 ASGVDVGGQHEWGELVQLDPRTVGVIVRLERETFQVLN---MHGKVVTVRHQAVTQKKDN 593

Query: 599 KISVQ-DRHNNTISAKDIVRILEGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFICVKSH 658
           + +V  D   N I  KDIV++++GP  G++G + H+YR   F++ +  +E+ G    K+ 
Sbjct: 594 RFAVALDSDQNNIHVKDIVKVIDGPHSGREGEIRHLYRSFAFLHCKKLVENGGMFVCKAR 653

Query: 659 SCVVVGGSRTNG--NRNGNSYSRLAGLGAPPRFPQSPKRFSRGGPPNDSGGRHRGGRGHH 718
             V+ GGS+     N     ++ ++   + P  P +  +    G P   GG  R GRG  
Sbjct: 654 HLVLAGGSKPRDVTNLTVGGFTPMSPRISSPMHPSAEGQHGGFGSP---GGMSR-GRGRR 713

Query: 719 DG-LVGSTVKVRQGPYKGYRGRVVEIKGQLVRVELESQMKVVTGIGIFSINTIILVLFAV 778
           D  L+G TV++ QGPYKGY G V +      RVEL S  + +                +V
Sbjct: 714 DNELIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTI----------------SV 770

Query: 779 DRNFISDNVAVSTPYRDTSRYG----MGSETP 789
           DR  ++  V    P   TS YG     GS+TP
Sbjct: 774 DRQRLT-TVDSQRPGGMTSTYGRTPMYGSQTP 770

[Close]

BLAST of Carg15770 vs. Swiss-Prot
Match: sp|O00267|SPT5H_HUMAN (Transcription elongation factor SPT5 OS=Homo sapiens OX=9606 GN=SUPT5H PE=1 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.5e-94
Identity = 241/693 (34.78%), Postives = 372/693 (53.68%), Query Frame = 0


Query: 119 DENRRMHRRPLLPREDEQEDVEALERRIQARYARSNHME-----YDEETTEVEQQALLPS 178
           DE+R   RR      D++E  E L      +YA+S+  E      DE + ++ QQ LLP 
Sbjct: 116 DEDRSGARRLQNLWRDQRE--EELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPG 175

Query: 179 VRDPKLWMVKCAIGHEREAAVCLMQKCID---RGPEMQIRSAIALDHLKNFIYIEADKEA 238
           V+DP LW VKC IG ER  A+ LM+K I        +QI+S +A +H+K +IY+EA K+ 
Sbjct: 176 VKDPNLWTVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQT 235

Query: 239 HVREACKGLRNI----YSQKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLA 298
           HV++A +G+ N+    ++Q+  +VPIKEMTDVL V  +  +L   +WVR+K G YK D+A
Sbjct: 236 HVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIA 295

Query: 299 KVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VAKKKAFV-PPPRFMNIDEARELHIR 358
           +V  V+  +  +++K+IPRID   +  ++  ++  AK+K F  PP R  + ++ R L   
Sbjct: 296 QVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGD 355

Query: 359 VERRRDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGD 418
           V        G++    G  + + GFL+K+ +M ++  + +KPT  ELEKF    E  D +
Sbjct: 356 VAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLE 415

Query: 419 IASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVN 478
           + + ST     ++ +F  GD V V +G+L NL+G +  V+   + I P+ + L   L   
Sbjct: 416 VVTEST--GKEREHNFQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFP 475

Query: 479 ERELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEV 538
            +EL KYF+ G+HVKV+ G  EG TG++V+VE++ +I+ SD T   ++V   D+   SE 
Sbjct: 476 AQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSET 535

Query: 539 TTGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGIPDRPEVDIVKLREIKSKIDK 598
            +GV   G +E  +LV LD  + GVI+R+E E FQVL       +V  V+ + +  K D 
Sbjct: 536 ASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQVLNMY---GKVVTVRHQAVTRKKDN 595

Query: 599 KISVQ-DRHNNTISAKDIVRILEGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFICVKSH 658
           + +V  D   N I  KDIV++++GP  G++G + H++R   F++ +  +E+ G    K+ 
Sbjct: 596 RFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTR 655

Query: 659 SCVVVGGSRTNGNRN---GNSYSRLAGLGAPPRFPQSPKRFSRGGPPNDSGGRHRGGRGH 718
             V+ GGS+     N   G        + +P       +R   G P   S G  R GRG 
Sbjct: 656 HLVLAGGSKPRDVTNFTVGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSXGMSR-GRGR 715

Query: 719 HDG-LVGSTVKVRQGPYKGYRGRVVEIKGQLVRVELESQMKVVTGIGIFSINTIILVLFA 778
            D  L+G TV++ QGPYKGY G V +      RVEL S  + +                +
Sbjct: 716 RDNELIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTI----------------S 775

Query: 779 VDRNFISDNVAVSTPYRDTSRYG----MGSETP 789
           VDR  ++  V    P   TS YG     GS+TP
Sbjct: 776 VDRQRLT-TVGSRRPGGMTSTYGRTPMYGSQTP 776

[Close]

BLAST of Carg15770 vs. TrEMBL
Match: tr|A0A1S3B4G0|A0A1S3B4G0_CUCME (Transcription elongation factor SPT5 OS=Cucumis melo OX=3656 GN=LOC103485653 PE=3 SV=1)

HSP 1 Score: 1327.4 bits (3434), Expect = 0.0e+00
Identity = 680/726 (93.66%), Postives = 695/726 (95.73%), Query Frame = 0


Query: 109 VDGATDIPDEDENRRMHRRPLLPREDEQEDVEALERRIQARYARSNHMEYDEETTEVEQQ 168
           VD   DIPDED+NRRMHRRPLLPREDEQEDVEALERRIQARYARSNHMEYDEETTEVEQQ
Sbjct: 112 VDNVADIPDEDDNRRMHRRPLLPREDEQEDVEALERRIQARYARSNHMEYDEETTEVEQQ 171

Query: 169 ALLPSVRDPKLWMVKCAIGHEREAAVCLMQKCIDRGPEMQIRSAIALDHLKNFIYIEADK 228
           ALLPSVRDPKLWMVKCAIG EREAAVCLMQKCIDRGPEMQIRSA+ALDHLKNFIYIEADK
Sbjct: 172 ALLPSVRDPKLWMVKCAIGREREAAVCLMQKCIDRGPEMQIRSAVALDHLKNFIYIEADK 231

Query: 229 EAHVREACKGLRNIYSQKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKV 288
           EAHVREACKGLRNIY+QK+ LVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKV
Sbjct: 232 EAHVREACKGLRNIYAQKITLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKV 291

Query: 289 VDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNIDEARELHIRVERR 348
           VDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNIDEARELHIRVERR
Sbjct: 292 VDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNIDEARELHIRVERR 351

Query: 349 RDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGDIASL 408
           RDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGDIASL
Sbjct: 352 RDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGDIASL 411

Query: 409 STLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNEREL 468
           STLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNEREL
Sbjct: 412 STLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNEREL 471

Query: 469 CKYFEPGNHVKVVTGTQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVTTGV 528
           CKYFEPGNHVKVV+GTQEGATGMVVKV+QHVLIILSDTTKEHIRVFADDVVESSEVTTGV
Sbjct: 472 CKYFEPGNHVKVVSGTQEGATGMVVKVDQHVLIILSDTTKEHIRVFADDVVESSEVTTGV 531

Query: 529 TKIGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGIPDRPEVDIVKLREIKSKIDKKISV 588
           T+IGDYELHDLVLLDNMSFGVIIRVE+EAFQVLKG PDRPEVDIVKLREIKSKIDKKISV
Sbjct: 532 TRIGDYELHDLVLLDNMSFGVIIRVETEAFQVLKGTPDRPEVDIVKLREIKSKIDKKISV 591

Query: 589 QDRHNNTISAKDIVRILEGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFICVKSHSCVVV 648
           QDR NNTIS+KD+VRILEGPCKGKQGPVEHIYRG+LFIYDRHHLEHAGFIC KS SCVVV
Sbjct: 592 QDRFNNTISSKDVVRILEGPCKGKQGPVEHIYRGILFIYDRHHLEHAGFICAKSQSCVVV 651

Query: 649 GGSRTNGNRNGNSYSRLAGLGAPPRFPQSPKRFSRGGPPNDSGGRHRGGRGHHDGLVGST 708
           GGSRTNGNRNGNSYSR AG+  PPRFPQSPKRFSRGGPPNDSGGRHRGGRGHHDGLVGST
Sbjct: 652 GGSRTNGNRNGNSYSRFAGIATPPRFPQSPKRFSRGGPPNDSGGRHRGGRGHHDGLVGST 711

Query: 709 VKVRQGPYKGYRGRVVEIKGQLVRVELESQMKVVTGIGIFSINTIILVLFAVDRNFISDN 768
           VKVRQGPYKGYRGRVVEIKGQLVRVELESQMKVVT                VDRNFISDN
Sbjct: 712 VKVRQGPYKGYRGRVVEIKGQLVRVELESQMKVVT----------------VDRNFISDN 771

Query: 769 VAVSTPYRDTSRYGMGSETPMHPXXXXXXXXXXXXXXXGTTPSHDGMRTPMRNRAWNPYA 828
           VA+STP+RD SRYGMGSETPMHPXXXXXXXXXXXXXX GTTP HDGMRTPMR+RAWNPYA
Sbjct: 772 VAISTPHRDASRYGMGSETPMHPXXXXXXXXXXXXXXIGTTPIHDGMRTPMRDRAWNPYA 821

Query: 829 PMSPSR 835
           PMSPSR
Sbjct: 832 PMSPSR 821

[Close]

BLAST of Carg15770 vs. TrEMBL
Match: tr|A0A0A0KI91|A0A0A0KI91_CUCSA (Transcription elongation factor SPT5 OS=Cucumis sativus OX=3659 GN=Csa_6G338670 PE=3 SV=1)

HSP 1 Score: 1323.1 bits (3423), Expect = 0.0e+00
Identity = 678/721 (94.04%), Postives = 693/721 (96.12%), Query Frame = 0


Query: 114 DIPDEDENRRMHRRPLLPREDEQEDVEALERRIQARYARSNHMEYDEETTEVEQQALLPS 173
           DIPDED+NRRMHRRPLLPREDEQEDVEALERRIQARYARSNHMEYDEETTEVEQQALLPS
Sbjct: 99  DIPDEDDNRRMHRRPLLPREDEQEDVEALERRIQARYARSNHMEYDEETTEVEQQALLPS 158

Query: 174 VRDPKLWMVKCAIGHEREAAVCLMQKCIDRGPEMQIRSAIALDHLKNFIYIEADKEAHVR 233
           VRDPKLWMVKCAIG EREAAVCLMQKCIDRGPEMQIRSA+ALDHLKNFIYIEADKEAHVR
Sbjct: 159 VRDPKLWMVKCAIGREREAAVCLMQKCIDRGPEMQIRSAVALDHLKNFIYIEADKEAHVR 218

Query: 234 EACKGLRNIYSQKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDN 293
           EACKGLRNIY+QK+ LVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDN
Sbjct: 219 EACKGLRNIYAQKITLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDN 278

Query: 294 VRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNIDEARELHIRVERRRDPIT 353
           VRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNIDEARELHIRVERRRDPIT
Sbjct: 279 VRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNIDEARELHIRVERRRDPIT 338

Query: 354 GEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGDIASLSTLFA 413
           GEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGDIASLSTLFA
Sbjct: 339 GEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGDIASLSTLFA 398

Query: 414 NRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNERELCKYFE 473
           NRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNERELCKYFE
Sbjct: 399 NRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNERELCKYFE 458

Query: 474 PGNHVKVVTGTQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVTTGVTKIGD 533
           PGNHVKVV+GTQEGATGMVVKV+QHVLIILSDTTKEHIRVFADDVVESSEVTTGVT+IGD
Sbjct: 459 PGNHVKVVSGTQEGATGMVVKVDQHVLIILSDTTKEHIRVFADDVVESSEVTTGVTRIGD 518

Query: 534 YELHDLVLLDNMSFGVIIRVESEAFQVLKGIPDRPEVDIVKLREIKSKIDKKISVQDRHN 593
           YELHDLVLLDNMSFGVIIRVE+EAFQVLKG PDRPEVDIVKLREIKSKIDKKISVQDR N
Sbjct: 519 YELHDLVLLDNMSFGVIIRVETEAFQVLKGTPDRPEVDIVKLREIKSKIDKKISVQDRFN 578

Query: 594 NTISAKDIVRILEGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFICVKSHSCVVVGGSRT 653
           NTIS+KD+VRILEGPCKGKQGPVEHIYRG+LFIYDRHHLEHAGFIC KS SCVVVGGSRT
Sbjct: 579 NTISSKDVVRILEGPCKGKQGPVEHIYRGILFIYDRHHLEHAGFICAKSQSCVVVGGSRT 638

Query: 654 NGNRNGNSYSRLAGLGAPPRFPQSPKRFSRGGPPNDSGGRHRGGRGHHDGLVGSTVKVRQ 713
           NGNRNGNSYSR AG+  PPRFPQSPKRFSRGGPPNDSGGRHRGGRGHHDGLVGSTVKVRQ
Sbjct: 639 NGNRNGNSYSRFAGIATPPRFPQSPKRFSRGGPPNDSGGRHRGGRGHHDGLVGSTVKVRQ 698

Query: 714 GPYKGYRGRVVEIKGQLVRVELESQMKVVTGIGIFSINTIILVLFAVDRNFISDNVAVST 773
           GPYKGYRGRVVEIKGQLVRVELESQMKVVT                VDRNFISDNVA+ST
Sbjct: 699 GPYKGYRGRVVEIKGQLVRVELESQMKVVT----------------VDRNFISDNVAIST 758

Query: 774 PYRDTSRYGMGSETPMHPXXXXXXXXXXXXXXXGTTPSHDGMRTPMRNRAWNPYAPMSPS 833
           P+RD SRYGMGSETPMHPXXXXXXXXXXXXXX GTTP HDGMRTPMR+RAWNPYAPMSPS
Sbjct: 759 PHRDASRYGMGSETPMHPXXXXXXXXXXXXXXIGTTPIHDGMRTPMRDRAWNPYAPMSPS 803

Query: 834 R 835
           R
Sbjct: 819 R 803

[Close]

BLAST of Carg15770 vs. TrEMBL
Match: tr|B9H0X9|B9H0X9_POPTR (Transcription elongation factor SPT5 OS=Populus trichocarpa OX=3694 GN=POPTR_004G162500v3 PE=3 SV=2)

HSP 1 Score: 1215.3 bits (3143), Expect = 0.0e+00
Identity = 620/729 (85.05%), Postives = 662/729 (90.81%), Query Frame = 0


Query: 107 FIVDG-ATDIPDEDENRRMHRRPLLPREDEQEDVEALERRIQARYARSNHMEYDEETTEV 166
           FIVD    D+PDE   RRMHRRPLLP E++QEDVEALER IQARYA+S H EYDEETTEV
Sbjct: 119 FIVDDHGADLPDEGSGRRMHRRPLLPAEEDQEDVEALERSIQARYAKSMHSEYDEETTEV 178

Query: 167 EQQALLPSVRDPKLWMVKCAIGHEREAAVCLMQKCIDRGPEMQIRSAIALDHLKNFIYIE 226
           EQQALLPSVRDPKLWMVKCAIG ERE AVCLMQK ID+G E+QIRSAIALDHLKN+IYIE
Sbjct: 179 EQQALLPSVRDPKLWMVKCAIGRERETAVCLMQKYIDKGSELQIRSAIALDHLKNYIYIE 238

Query: 227 ADKEAHVREACKGLRNIYSQKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDL 286
           ADKEAHVREACKGLRNI+ QK+MLVPIKEMTDVLSVESK IDLSRDTWVRMKIG YKGDL
Sbjct: 239 ADKEAHVREACKGLRNIFGQKIMLVPIKEMTDVLSVESKVIDLSRDTWVRMKIGNYKGDL 298

Query: 287 AKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNIDEARELHIRV 346
           AKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE  KKKAFVPPPRFMN++EARELHIRV
Sbjct: 299 AKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREAPKKKAFVPPPRFMNVEEARELHIRV 358

Query: 347 ERRRDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGDI 406
           ERRRDP+TG+YFENIGGM FKDGFLYKTVSMKSISAQNIKP+FDELEKFR PGENGDGDI
Sbjct: 359 ERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIKPSFDELEKFRTPGENGDGDI 418

Query: 407 ASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNE 466
           ASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKV+EENVHIRPEMKGLPKTLAVNE
Sbjct: 419 ASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNE 478

Query: 467 RELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVT 526
           +ELCKYFEPGNHVKVV+GT EGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVT
Sbjct: 479 KELCKYFEPGNHVKVVSGTHEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVT 538

Query: 527 TGVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGIPDRPEVDIVKLREIKSKIDKK 586
           TG T IG YELHDLVLLDNMSFG+IIRVESEAFQVLKG+P+RP+V +V+LREIK KI+KK
Sbjct: 539 TGATNIGGYELHDLVLLDNMSFGLIIRVESEAFQVLKGVPERPDVALVRLREIKCKIEKK 598

Query: 587 ISVQDRHNNTISAKDIVRILEGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFICVKSHSC 646
            +VQDR+ NT+S KD+VRI++GPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFIC KSHSC
Sbjct: 599 TNVQDRYKNTVSVKDVVRIIDGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFICAKSHSC 658

Query: 647 VVVGGSRTNGNRNGNSYSRLAGLGAPPRFPQSPKRFSRGGPPNDSGGRHRGGRGHHDGLV 706
           VVVGGSR+NG+RNG+SYSRL+    PPR P SPKRFSRGGPP +SGGR+RGGRG HD LV
Sbjct: 659 VVVGGSRSNGDRNGDSYSRLSSFKTPPRVPPSPKRFSRGGPPFESGGRNRGGRGGHDALV 718

Query: 707 GSTVKVRQGPYKGYRGRVVEIKGQLVRVELESQMKVVTGIGIFSINTIILVLFAVDRNFI 766
           G+T+KVRQGP+KGYRGRVV+IKGQLVRVELESQMKVVT                VDR+ I
Sbjct: 719 GTTIKVRQGPFKGYRGRVVDIKGQLVRVELESQMKVVT----------------VDRSHI 778

Query: 767 SDNVAVSTPYRDTSRYGMGSETPMHPXXXXXXXXXXXXXXXGTTPSHDGMRTPMRNRAWN 826
           SDNV VSTPYRDT RYGMGSETPMHP XXXXXXXXXXX   G TP HDGMRTPMR+RAWN
Sbjct: 779 SDNVVVSTPYRDTLRYGMGSETPMHPSXXXXXXXXXXXRDAGATPIHDGMRTPMRDRAWN 831

Query: 827 PYAPMSPSR 835
           PYAPMSP R
Sbjct: 839 PYAPMSPLR 831

[Close]

BLAST of Carg15770 vs. TrEMBL
Match: tr|A0A061FI63|A0A061FI63_THECC (Global transcription factor group A2 isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_035426 PE=4 SV=1)

HSP 1 Score: 1206.0 bits (3119), Expect = 0.0e+00
Identity = 614/728 (84.34%), Postives = 659/728 (90.52%), Query Frame = 0


Query: 107 FIVDGATDIPDEDENRRMHRRPLLPREDEQEDVEALERRIQARYARSNHMEYDEETTEVE 166
           FIVD   D+PDED  RR+HRRPL  REDEQEDVEALER IQARYARS+H EYDEETTEVE
Sbjct: 113 FIVDNGADLPDEDVGRRLHRRPLPLREDEQEDVEALERSIQARYARSSHTEYDEETTEVE 172

Query: 167 QQALLPSVRDPKLWMVKCAIGHEREAAVCLMQKCIDRGPEMQIRSAIALDHLKNFIYIEA 226
           QQALLPSVRDPKLWMVKCAIG ERE AVCLMQK ID+G E+QIRS IALDHLKN+IYIEA
Sbjct: 173 QQALLPSVRDPKLWMVKCAIGRERETAVCLMQKYIDKGSELQIRSVIALDHLKNYIYIEA 232

Query: 227 DKEAHVREACKGLRNIYSQKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLA 286
           DKEAHVREA KGLRNI++ K+MLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLA
Sbjct: 233 DKEAHVREAVKGLRNIFATKIMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLA 292

Query: 287 KVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNIDEARELHIRVE 346
           +VVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMN+DEARELHIRVE
Sbjct: 293 QVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNVDEARELHIRVE 352

Query: 347 RRRDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGDIA 406
           RRRDP+TG+YFENIGGM FKDGFLYKTVSMKSISAQNIKPTFDELEKFR P ENG+ ++ 
Sbjct: 353 RRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIKPTFDELEKFRTPSENGESEMV 412

Query: 407 SLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNER 466
            LSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNE+
Sbjct: 413 GLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNEK 472

Query: 467 ELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVTT 526
           ELCKYFEPGNHVKVV+GT+EGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVTT
Sbjct: 473 ELCKYFEPGNHVKVVSGTKEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVTT 532

Query: 527 GVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGIPDRPEVDIVKLREIKSKIDKKI 586
           GVTKIG+YELHDLVLLDN SFGVIIRVESEAFQVLKG+P+RPEV +VKLREIK K++KK 
Sbjct: 533 GVTKIGEYELHDLVLLDNNSFGVIIRVESEAFQVLKGVPERPEVSLVKLREIKCKLEKKF 592

Query: 587 SVQDRHNNTISAKDIVRILEGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFICVKSHSCV 646
           +VQDR+ NT+S KD+VRILEGPCKGKQGPVEHIY+GVLF+YDRHHLEHAGFIC K+ SC 
Sbjct: 593 NVQDRYRNTVSVKDVVRILEGPCKGKQGPVEHIYKGVLFVYDRHHLEHAGFICAKADSCC 652

Query: 647 VVGGSRTNGNRNGNSYSRLAGLGAPPRFPQSPKRFSRGGPPNDSGGRHRGGRGHHDGLVG 706
           +VGGSR+NG+RNG S+SR  G   PPR P SP++FSRGGPP D+GGRHRGGRG HD LVG
Sbjct: 653 IVGGSRSNGDRNGESFSRFGGFKTPPRIPPSPRKFSRGGPPFDTGGRHRGGRGGHDALVG 712

Query: 707 STVKVRQGPYKGYRGRVVEIKGQLVRVELESQMKVVTGIGIFSINTIILVLFAVDRNFIS 766
           +TVK+RQGP+KGYRGRVV+IKGQ VRVELESQMKVVT               AVDRNFIS
Sbjct: 713 TTVKIRQGPFKGYRGRVVDIKGQSVRVELESQMKVVT---------------AVDRNFIS 772

Query: 767 DNVAVSTPYRDTSRYGMGSETPMHPXXXXXXXXXXXXXXXGTTPSHDGMRTPMRNRAWNP 826
           DNV +STPYRDTSRYGMGSETPMHPXXXXXXXXXXXXX  G TP HDGM     +RAWNP
Sbjct: 773 DNVVISTPYRDTSRYGMGSETPMHPXXXXXXXXXXXXXDAGATPIHDGMXXXXXDRAWNP 825

Query: 827 YAPMSPSR 835
           YAPMSP R
Sbjct: 833 YAPMSPPR 825

[Close]

BLAST of Carg15770 vs. TrEMBL
Match: tr|A0A061FIV9|A0A061FIV9_THECC (Transcription elongation factor SPT5 OS=Theobroma cacao OX=3641 GN=TCM_035426 PE=3 SV=1)

HSP 1 Score: 1203.7 bits (3113), Expect = 0.0e+00
Identity = 613/728 (84.20%), Postives = 658/728 (90.38%), Query Frame = 0


Query: 107 FIVDGATDIPDEDENRRMHRRPLLPREDEQEDVEALERRIQARYARSNHMEYDEETTEVE 166
           FIVD   D+PDED  RR+HRRPL  REDEQEDVEALER IQARYARS+H EYDEETTEVE
Sbjct: 113 FIVDNGADLPDEDVGRRLHRRPLPLREDEQEDVEALERSIQARYARSSHTEYDEETTEVE 172

Query: 167 QQALLPSVRDPKLWMVKCAIGHEREAAVCLMQKCIDRGPEMQIRSAIALDHLKNFIYIEA 226
           QQALLPSVRDPKLWMVKCAIG ERE AVCLMQK ID+G E+QIRS IALDHLKN+IYIEA
Sbjct: 173 QQALLPSVRDPKLWMVKCAIGRERETAVCLMQKYIDKGSELQIRSVIALDHLKNYIYIEA 232

Query: 227 DKEAHVREACKGLRNIYSQKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLA 286
           DKEAHVREA KGLRNI++ K+MLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLA
Sbjct: 233 DKEAHVREAVKGLRNIFATKIMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLA 292

Query: 287 KVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNIDEARELHIRVE 346
           +VVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMN+DEARELHIRVE
Sbjct: 293 QVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNVDEARELHIRVE 352

Query: 347 RRRDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGDIA 406
           RRRDP+TG+YFENIGGM FKDGFLYKTVSMKSISAQNIKPTFDELEKFR P ENG+ ++ 
Sbjct: 353 RRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIKPTFDELEKFRTPSENGESEMV 412

Query: 407 SLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNER 466
            LSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNE+
Sbjct: 413 GLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNEK 472

Query: 467 ELCKYFEPGNHVKVVTGTQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVTT 526
           ELCKYFEPGNHVKVV+GT+EGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVTT
Sbjct: 473 ELCKYFEPGNHVKVVSGTKEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVTT 532

Query: 527 GVTKIGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGIPDRPEVDIVKLREIKSKIDKKI 586
           GVTKIG+YELHDLVLLDN SFGVIIRVESEAFQVLKG+P+RPEV +VKLREIK K++KK 
Sbjct: 533 GVTKIGEYELHDLVLLDNNSFGVIIRVESEAFQVLKGVPERPEVSLVKLREIKCKLEKKF 592

Query: 587 SVQDRHNNTISAKDIVRILEGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGFICVKSHSCV 646
           +VQDR+ NT+S KD+VRILEGPCKGKQGPVEHIY+GVLF+YDRHHLEHAGFIC K+ SC 
Sbjct: 593 NVQDRYRNTVSVKDVVRILEGPCKGKQGPVEHIYKGVLFVYDRHHLEHAGFICAKADSCC 652

Query: 647 VVGGSRTNGNRNGNSYSRLAGLGAPPRFPQSPKRFSRGGPPNDSGGRHRGGRGHHDGLVG 706
           +VGGSR+NG+RNG S+SR  G   PPR P SP++FSRGGPP D+GGRHRGGRG HD LVG
Sbjct: 653 IVGGSRSNGDRNGESFSRFGGFKTPPRIPPSPRKFSRGGPPFDTGGRHRGGRGGHDALVG 712

Query: 707 STVKVRQGPYKGYRGRVVEIKGQLVRVELESQMKVVTGIGIFSINTIILVLFAVDRNFIS 766
           +TVK+RQGP+KGYRGRVV+IKGQ VRVELESQMKVVT                VDRNFIS
Sbjct: 713 TTVKIRQGPFKGYRGRVVDIKGQSVRVELESQMKVVT----------------VDRNFIS 772

Query: 767 DNVAVSTPYRDTSRYGMGSETPMHPXXXXXXXXXXXXXXXGTTPSHDGMRTPMRNRAWNP 826
           DNV +STPYRDTSRYGMGSETPMHPXXXXXXXXXXXXX  G TP HDGM     +RAWNP
Sbjct: 773 DNVVISTPYRDTSRYGMGSETPMHPXXXXXXXXXXXXXDAGATPIHDGMXXXXXDRAWNP 824

Query: 827 YAPMSPSR 835
           YAPMSP R
Sbjct: 833 YAPMSPPR 824

The following BLAST results are available for this feature:

BLAST of Carg15770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957057.1	0.0e+00	97.62	putative transcription elongation factor SPT5 homolog 1 [Cucurbita moschata]	[more]
XP_023529878.1	0.0e+00	97.35	putative transcription elongation factor SPT5 homolog 1 [Cucurbita pepo subsp. p...	[more]
XP_022989759.1	0.0e+00	96.82	putative transcription elongation factor SPT5 homolog 1 [Cucurbita maxima]	[more]
XP_022141427.1	0.0e+00	93.95	putative transcription elongation factor SPT5 homolog 1 isoform X2 [Momordica ch...	[more]
XP_022141426.1	0.0e+00	93.95	putative transcription elongation factor SPT5 homolog 1 isoform X1 [Momordica ch...	[more]

BLAST of Carg15770 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G08350.1	2.7e-288	77.51	global transcription factor group A2	[more]
AT2G34210.1	1.3e-258	65.99	Transcription elongation factor Spt5	[more]
AT5G04290.1	1.1e-71	30.67	kow domain-containing transcription factor 1	[more]

BLAST of Carg15770 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9STN3\|SPT51_ARATH	4.8e-287	77.51	Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana ...	[more]
sp\|O80770\|SPT52_ARATH	2.3e-257	65.99	Putative transcription elongation factor SPT5 homolog 2 OS=Arabidopsis thaliana ...	[more]
sp\|Q5ZI08\|SPT5H_CHICK	2.3e-95	34.59	Transcription elongation factor SPT5 OS=Gallus gallus OX=9031 GN=SUPT5H PE=2 SV=...	[more]
sp\|O55201\|SPT5H_MOUSE	8.7e-95	34.97	Transcription elongation factor SPT5 OS=Mus musculus OX=10090 GN=Supt5h PE=1 SV=...	[more]
sp\|O00267\|SPT5H_HUMAN	1.5e-94	34.78	Transcription elongation factor SPT5 OS=Homo sapiens OX=9606 GN=SUPT5H PE=1 SV=1	[more]

BLAST of Carg15770 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B4G0\|A0A1S3B4G0_CUCME	0.0e+00	93.66	Transcription elongation factor SPT5 OS=Cucumis melo OX=3656 GN=LOC103485653 PE=...	[more]
tr\|A0A0A0KI91\|A0A0A0KI91_CUCSA	0.0e+00	94.04	Transcription elongation factor SPT5 OS=Cucumis sativus OX=3659 GN=Csa_6G338670 ...	[more]
tr\|B9H0X9\|B9H0X9_POPTR	0.0e+00	85.05	Transcription elongation factor SPT5 OS=Populus trichocarpa OX=3694 GN=POPTR_004...	[more]
tr\|A0A061FI63\|A0A061FI63_THECC	0.0e+00	84.34	Global transcription factor group A2 isoform 2 OS=Theobroma cacao OX=3641 GN=TCM...	[more]
tr\|A0A061FIV9\|A0A061FIV9_THECC	0.0e+00	84.20	Transcription elongation factor SPT5 OS=Theobroma cacao OX=3641 GN=TCM_035426 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR008991	Translation_prot_SH3-like_sf
IPR039385	NGN_Euk
IPR005825	Ribosomal_L24/26_CS
IPR036735	NGN_dom_sf
IPR022581	Spt5_N
IPR014722	Rib_L2_dom2
IPR005100	NGN-domain
IPR006645	NGN_dom
IPR005824	KOW

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15770-RA	Carg15770-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 132..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 809..834
None	No IPR available	PANTHER	PTHR11125	SUPPRESSOR OF TY 5	coord: 12..824
None	No IPR available	CDD	cd06085	KOW_Spt5_5	coord: 702..743 e-value: 2.59444E-14 score: 67.8949
None	No IPR available	CDD	cd06084	KOW_Spt5_4	coord: 599..641 e-value: 8.56719E-16 score: 72.1673
None	No IPR available	CDD	cd06082	KOW_Spt5_2	coord: 420..470 e-value: 4.74438E-13 score: 64.4454
None	No IPR available	CDD	cd06083	KOW_Spt5_3	coord: 471..521 e-value: 1.26008E-18 score: 80.262
None	No IPR available	CDD	cd06081	KOW_Spt5_1	coord: 271..308 e-value: 2.74671E-15 score: 70.5754
IPR005824	KOW	SMART	SM00739	kow_9	coord: 595..622 e-value: 0.086 score: 22.0 coord: 267..294 e-value: 6.3 score: 15.8 coord: 419..446 e-value: 0.0034 score: 26.6 coord: 702..729 e-value: 0.034 score: 23.3 coord: 471..498 e-value: 3.0E-4 score: 30.1
IPR005824	KOW	PFAM	PF00467	KOW	coord: 705..736 e-value: 6.1E-6 score: 25.9 coord: 474..501 e-value: 4.1E-10 score: 39.2
IPR006645	NusG, N-terminal	SMART	SM00738	nusgn_4	coord: 176..262 e-value: 3.5E-12 score: 56.5
IPR005100	NGN domain	PFAM	PF03439	Spt5-NGN	coord: 178..259 e-value: 2.0E-24 score: 85.2
IPR014722	Ribosomal protein L2, domain 2	GENE3D	G3DSA:2.30.30.30		coord: 687..744 e-value: 1.3E-16 score: 61.7
IPR014722	Ribosomal protein L2, domain 2	GENE3D	G3DSA:2.30.30.30		coord: 270..310 e-value: 1.5E-7 score: 33.1
IPR014722	Ribosomal protein L2, domain 2	GENE3D	G3DSA:2.30.30.30		coord: 414..471 e-value: 1.0E-17 score: 65.6
IPR014722	Ribosomal protein L2, domain 2	GENE3D	G3DSA:2.30.30.30		coord: 473..523 e-value: 2.0E-19 score: 70.9
IPR022581	Spt5 transcription elongation factor, N-terminal	PFAM	PF11942	Spt5_N	coord: 85..172 e-value: 1.1E-13 score: 51.8
IPR036735	NusG, N-terminal domain superfamily	GENE3D	G3DSA:3.30.70.940		coord: 172..269 e-value: 2.4E-35 score: 122.5
IPR005825	Ribosomal protein L24/L26, conserved site	PROSITE	PS01108	RIBOSOMAL_L24	coord: 423..440
IPR039385	NGN domain, eukaryotic	CDD	cd09888	NGN_Euk	coord: 178..260 e-value: 4.0166E-38 score: 136.892
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	SSF50104	Translation proteins SH3-like domain	coord: 463..522

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15770	Cla013863	Watermelon (97103) v1	carwmB0064
Carg15770	Csa6G338670	Cucumber (Chinese Long) v2	carcuB0067
Carg15770	MELO3C008414	Melon (DHL92) v3.5.1	carmeB0066
Carg15770	ClCG08G006430	Watermelon (Charleston Gray)	carwcgB0066
Carg15770	CSPI06G18140	Wild cucumber (PI 183967)	carcpiB0071
Carg15770	Cucsa.077110	Cucumber (Gy14) v1	carcgyB0070
Carg15770	CmaCh04G024220	Cucurbita maxima (Rimu)	carcmaB0088
Carg15770	CmaCh15G006270	Cucurbita maxima (Rimu)	carcmaB0087
Carg15770	CmoCh04G025390	Cucurbita moschata (Rifu)	carcmoB0094
Carg15770	CmoCh15G006340	Cucurbita moschata (Rifu)	carcmoB0092
Carg15770	Lsi08G005190	Bottle gourd (USVL1VR-Ls)	carlsiB059
Carg15770	Cp4.1LG13g04370	Cucurbita pepo (Zucchini)	carcpeB0095
Carg15770	Cp4.1LG01g20900	Cucurbita pepo (Zucchini)	carcpeB0096
Carg15770	CsGy6G017590	Cucumber (Gy14) v2	carcgybB0067
Carg15770	MELO3C008414.2	Melon (DHL92) v3.6.1	carmedB0066
Carg15770	CsaV3_6G031000	Cucumber (Chinese Long) v3	carcucB0073
Carg15770	Cla97C08G149210	Watermelon (97103) v2	carwmbB0063
Carg15770	Bhi04G001422	Wax gourd	carwgoB0077

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15770	Carg01579	Silver-seed gourd	carcarB076

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15770	Cucurbita moschata (Rifu)	carcmoB0091
Carg15770	Cucurbita moschata (Rifu)	carcmoB0093
Carg15770	Cucurbita pepo (Zucchini)	carcpeB0097