Carg15621 (gene) Silver-seed gourd

NameCarg15621
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_059 : 584635 .. 587149 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAATTATAGTGAGAGGAATATCTTGAAACTCATACAGTCAGTGAGACGGCGTCGTTTTGGTTTGAAAGTGATTCCGTCCTGCTACTCAATTATTCATTGGTCACAGAAGGAAGTCGGACGTGACGCCACCATCCACCCCAATGACGCCACGTGTCAATTTGTCTTTAACCACGGACGTCAAAACTGACCGTTAACTCCATTTGACCAAACTAGCAGCGTCCGCTCTGTCAGTTGCGAAGGAAAGAAAGAAAAGGAACAAGGAAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGGATAGAGACGGAATCTCGAGTGGTCAAAGAAAAACTGCAAATACTGCAGAATCCTCTTTCAGCTCTCTTTGCCAGGGGGAAGATTCGTAGCTGTTTTCTTTCTGCTTGGATTTGAAGGTTTTTGCGAAATGATCTGCTTGCTTCAGGTATTTGGATTTCAAAGTTCGAATGGTTTTTGTTTTCTACTGTTTTGGTGGATTTTTCCGTTTGAAAAACTGGAAGAAATCGATAGGAACTTTGTGATTGTTGTACTGGTTTTAGATCTTGTCTGTATTGCATTTTGAGTGATTTGGAGATTTGGACTTAGATTTCGGGATTTTTTCCTTTGTTTTCGGCTTTTTGGATTTGATTATTGAAATGCTTAGAGGAACCTTGTGCTGATGTTTATCTGGCTTGATTTCTTGGCCTTTTGAAATGGTAGTGTGTGGGAAACTGGCTGAAGGTGAAGCGGTATGAATATCGAAGATTATGAGTCATGAGGGGAAAACCTTTATAAACTTAAAATTTCCTTTCAGTTTGTTTAGTTGAGATTTTTTAAATGTATACATGTATGATTATGGTGTCTTGGGCTTACTTCTTGCTCTGTGCTGATGGCTCACCCAACTAGTTTTGAGCAGCTTCATCCGTCCCAATAGAACAAAGTTTTTAAGAGATTTAAGTTCTCAACTAGAGGTTTGGACTAGGAACAGCCTTGGAGGGTGTGTCTAAATATCCCATGTCCTTATCTTATCGTTAAGTATTTGATGACTGATGGCTAAGAATGATTGTACTTCAATGTGATTTGTGGTTGAGATTTATCAGATGAGTGGGGTGCTCTAATGAACCGAAGTTAATTTATATCACAGCAAGCTTTGAATGTAGCTAAGAGTGGATATCTTAGTGACTATTTGAGAAGGGTTCGGTGTTCATTTGTAAGAATGGATAGGAATTTGAATATAATTCCATTTAGATTAGAACTTAGAAGTGGAGAAGATGTTTAGGGACAAGATCTCCATCTGTAGGAACGTTTTAGGGTGAAACCTAAAGAAAAATCATGCAGGCTTCAGCTTGAAATGAACAATACTGATATGTCGTGGAAATATGGTGTAACAGCCCAAATGTTGTCCTTTTTGGGCTTTCCCTTCAAAGTTTTAAAACATCGATATGTCGTGGAAATATGGTGTAACAGCTCAGATGTTGTCCGTCGTGGAAATATGGTGTAACAGCTCAGATGTTGTCCTTTTTGGGCTTTCCCTTCAAAGTTTTAAAACGTGTCTGCTAGGAAGGAGGTTCCACACTCTTATAAGGAATGGTTTGCTCCCCTCTCCAACCGACATGGGATCTCACAATCCACCCCTCTTGGGGGCCAGCGTCCTTGCTGGCACACTACCCAGTGATTGGCTCTAATACCATATGTAACAGCCCAAGTCCTCGCTAGTCGATATTGTCCTTTTTGAGCTTTCCGTTTTGGTATCTCCCTCAAAGTTTTAAACACATCTGCCACTCTCCCTCAAGGTTTTAAACACATCTGCCACCGTAGGTTTCCACACCTTTATAAGGAATGACCTGTTTGAAACCAAGTCTTGACTATGAAGTTTTCCATTCAATTCTTGCCTCTTTTCTTTGTAAACTTCTCGAAGGTCCATATAGGGACATTGTAAAGATCCCCTTGATGCAATCTCCCAAGCAATGTATTGAAGCCCATTGTATAGAGTGACGCCTTCAAAGTAATAGAGAACTCTTAATATCTGTAAGGGATGTCTCGTCTATCTTGCAAATCTAAAACATGGCTTGAGGCATCCAACTTCAATGAATGGCCAGATCTCTAGATCTTGACCGAGATTTAGACAACTCAATCCTTGATTGAACAGAGGTTAGATTATTGTTAAAATTTAAAAGTTTGTATGGATAATACTAAGAACTCCTTTCACCCCCTTCACTTTTCTTCCTTGCCCTCTCCTTTCACATTCCATCTCAAGATTTTCATAACAACCTCGAATCCCTATCCAAACTCTCCATGTCAAAACCTAGACAGTTTTACTAAAAGAGAAGATTTTTGAGTTTTTTGATTGCTTCATTCCATCTCTTTTACGGCCAGTCCTTTGTTTTGGATTTTTCTCGGAAATTCTATCAAGATGCCTATTAGGTGGTGAAGTGCTGGAGCATTGCTCCAGTCACATGGGTTGGTCAAGAAGCGAGCCAACAAGAGGAGTCTGCAAAAGGGAGCAAGTTACAATAA

mRNA sequence

ATGGACAATTATAGTGAGAGGAATATCTTGAAACTCATACAGTCAGTGAGACGGCGTCGTTTTGGTTTGAAAGTGATTCCGTCCTGCTACTCAATTATTCATTGGTCACAGAAGGAAGTCGGACGTGACGCCACCATCCACCCCAATGACGCCACCGTCCGCTCTGTCAGTTGCGAAGGAAAGAAAGAAAAGGAACAAGGAAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGGATAGAGACGGAATCTCGAGTGGTCAAAGAAAAACTGCAAATACTGCAGAATCCTCTTTCAGCTCTCTTTGCCAGGGGGAAGATTCGTTTTTGCGAAATGATCTGCTTGCTTCAGTGTGTGGGAAACTGGCTGAAGGTGAAGCGGTGGTGAAGTGCTGGAGCATTGCTCCAGTCACATGGGTTGGTCAAGAAGCGAGCCAACAAGAGGAGTCTGCAAAAGGGAGCAAGTTACAATAA

Coding sequence (CDS)

ATGGACAATTATAGTGAGAGGAATATCTTGAAACTCATACAGTCAGTGAGACGGCGTCGTTTTGGTTTGAAAGTGATTCCGTCCTGCTACTCAATTATTCATTGGTCACAGAAGGAAGTCGGACGTGACGCCACCATCCACCCCAATGACGCCACCGTCCGCTCTGTCAGTTGCGAAGGAAAGAAAGAAAAGGAACAAGGAAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGGATAGAGACGGAATCTCGAGTGGTCAAAGAAAAACTGCAAATACTGCAGAATCCTCTTTCAGCTCTCTTTGCCAGGGGGAAGATTCGTTTTTGCGAAATGATCTGCTTGCTTCAGTGTGTGGGAAACTGGCTGAAGGTGAAGCGGTGGTGAAGTGCTGGAGCATTGCTCCAGTCACATGGGTTGGTCAAGAAGCGAGCCAACAAGAGGAGTCTGCAAAAGGGAGCAAGTTACAATAA

Protein sequence

MDNYSERNILKLIQSVRRRRFGLKVIPSCYSIIHWSQKEVGRDATIHPNDATVRSVSCEGKKEKEQGRREEKRREEKDRDGISSGQRKTANTAESSFSSLCQGEDSFLRNDLLASVCGKLAEGEAVVKCWSIAPVTWVGQEASQQEESAKGSKLQ
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg15621-RACarg15621-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..96

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg15621CmoCh11G016790Cucurbita moschata (Rifu)carcmoB0502
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg15621Silver-seed gourdcarcarB298
Carg15621Silver-seed gourdcarcarB397
Carg15621Silver-seed gourdcarcarB398
Carg15621Cucumber (Gy14) v2carcgybB0376
Carg15621Cucumber (Gy14) v2carcgybB0378
Carg15621Cucumber (Gy14) v1carcgyB0428
Carg15621Cucumber (Gy14) v1carcgyB0429
Carg15621Cucurbita maxima (Rimu)carcmaB0518
Carg15621Cucurbita maxima (Rimu)carcmaB0519
Carg15621Cucurbita maxima (Rimu)carcmaB0520
Carg15621Cucurbita maxima (Rimu)carcmaB0521
Carg15621Cucurbita maxima (Rimu)carcmaB0522
Carg15621Cucurbita maxima (Rimu)carcmaB0523
Carg15621Cucurbita moschata (Rifu)carcmoB0503
Carg15621Cucurbita moschata (Rifu)carcmoB0504
Carg15621Cucurbita moschata (Rifu)carcmoB0505
Carg15621Cucurbita moschata (Rifu)carcmoB0506
Carg15621Cucurbita pepo (Zucchini)carcpeB0520
Carg15621Cucurbita pepo (Zucchini)carcpeB0515
Carg15621Cucurbita pepo (Zucchini)carcpeB0516
Carg15621Cucurbita pepo (Zucchini)carcpeB0517
Carg15621Cucurbita pepo (Zucchini)carcpeB0518
Carg15621Cucurbita pepo (Zucchini)carcpeB0519
Carg15621Wild cucumber (PI 183967)carcpiB0401
Carg15621Wild cucumber (PI 183967)carcpiB0403
Carg15621Cucumber (Chinese Long) v2carcuB0396
Carg15621Cucumber (Chinese Long) v2carcuB0398
Carg15621Cucumber (Chinese Long) v3carcucB0400
Carg15621Melon (DHL92) v3.6.1carmedB0377
Carg15621Bottle gourd (USVL1VR-Ls)carlsiB332
Carg15621Melon (DHL92) v3.5.1carmeB0370
Carg15621Melon (DHL92) v3.5.1carmeB0372
Carg15621Watermelon (Charleston Gray)carwcgB0358
Carg15621Watermelon (Charleston Gray)carwcgB0359
Carg15621Watermelon (97103) v1carwmB0357
Carg15621Watermelon (97103) v1carwmB0358
Carg15621Watermelon (97103) v2carwmbB0389
Carg15621Watermelon (97103) v2carwmbB0384
Carg15621Wax gourdcarwgoB0450
Carg15621Wax gourdcarwgoB0451