Carg15509 (gene) Silver-seed gourd

Overview
NameCarg15509
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionU11/U12 small nuclear ribonucleoprotein 35 kDa protein
LocationCucurbita_argyrosperma_scaffold_069 : 573054 .. 577018 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAACAAACTCGTTGGGGTGTTGGTCAATTGTCTCTCTACTCTGTAGCTAAAAATCTCGGCTGAAACGAGGGGGAGTAAGACGACGAGTGGGCTTGGCGCGCCATGAGCGGGAGCAACGTAAGCAAGGTCTTCTACGCCGAGAATTACCATCCAATTCAAGCCGGCAGCATCGACGGCACCGATATTCTTCCCCACGACAATGCCGTCTACCGAGCATTGCTATGTTCCGCTGCTGGCCTCTGTAAGTCTCTTGCCTCTAATTTTCAGCGCCAGTTTGTATTTGTTGATGTTCTTAAGCTTATTCTAATCGACTGTTGGGTCTGGTTTCGGCAGATGATCCCCTTCGCGATCCCAAGGTCTTCGGTGACCCTTATTGCACCCTCTTCGTTGGTCGCCTTTCTCATCTGACTACCGAAGATAATCTTCGTAGGGTATTGTCTATTGACCTCACTAATTGCTTGTTATTGACTGATTCTGATGAGTTGAAATGAATTAGTTATAATTCGAATCGTGGGTGGAGGGGAGATTAAAGTATAAAGGACGGAGGGTGTTGAAGGATTTTATGTTCTTGATAAATTTTGATAGTGAAGAGACCTTAGTAGCCCCGATAGAGCAATTTTTCCCTTACAGAATTTGTTGGTTGGAACATTTTAGGGTTGCTGGTGATTACCTAATGACTGGACAGTCAGTGACCGAAGTCACTGTGAATGGCCACCATAACTATGAAGGTCCTATCTAGAGTTTAAATTGTACTAACTTTGTGCAACGTAGGGTTTTGGCTTCAAATAGTTAAGCTACATCTTAAACTTCAAGATGGAAGCCTTTCTAGAGGATCCCGTATCCAGCACCCCAACATAAAAAAAAGGGCATAAAAAAGCCTTATCTAGGTTGGAAAAATGTGAGATCCCACGTTGGTTGGAGAGGGGAATGAAGCATTCCTTATAAGGGTATTAAAACCTCTCCCTAGTAGACGTGTTTTAAAACGTGAAGCTGACAGTGATATGTAATGAGACCAAAGCGGACAATATTTGTTAGTGGTGGATTTGAGCTGAAGCTTAACACAAACTAAGCTTTAACAATTATTTCCTATAACGGTAAAGATTAGATTACTCAAGAGGACTGAGGAGAGAGCATCCATTCAGACTGTTTTGCTCATGATGTGTAGCCTTTCTTTAAAAAAACTGACTAGAAAGGAATTGAGCGTATTAGAATTTTTCTCGATCTCTGGATTCTCAAAAGCTTGCTTTCCTATTTTAATTACTTGCACTGTTGCATTTGATATTTCATCTATAATTTACTGCTTTTCTTTTTGTTTCCCTTTCTTCATCTCATCAGCTGAAAAAAAAAATGAATTTCATCTTTCAGGCTATGAGCAAGTATGGTCGGATTAAGAACCTACGCTTAGTCAGACACATTGGTGACTTTCTTATCTAGTTCTGAATTTGATCTTTTATTTGGTTTAGAGGGTATCCTGATTAGTGATTTGGTGCCCAAAAATTGGTCACATTTCCAATATTCGGGATATTTATACTATAAACATTTTTTACATTTAACAGATTACTCTGTTCATATGTTCAACGGATGGAAGAGACAATAATGTTTCTCATGAAATGTGCATGATGTTTTGCAGTAACTGGTTCTTCACGTGGTTATGCTTTTGTTGAATATGAAACTGAAAAAGAGATGCGACATGCATATAAGGTGGTACAACTTCTCGAGTCCTTTAATTTCACCTGAGTTTATCCTTGTGTTCTTGTTTTTGGTTTATATTTTTATTCATTTTATTTGCTGTGTGGTGCCTAATAGCAATCAAATTTGTGTGATGTGATGTTATATTGCATTTTCTTCAAAGATCACTGGGTTTTTTCTTAATGAACTATTGATTCTTGTTGTTTGTCCAACCTTTCCTGTATCTCTTATCATTCATTCATAGAAGTTCTCGGTCTTATCGTTCATGGAAAAAAAAAAAAAAAAGCCTCCAGTTATTTCATTTTTTTCTTGAGAAATACAATAATAAGTTTGTTTTGGTGGCAAATGATATTGATGTCTGCTGTTAATTAACTTTGTTCATCAGGATGCTCATCATTCAATGATAGATGATTGCGAAATTATAGTTGACTACAATCGACAACAGCTAATGCCCGGATGGATTCCACGAAGATTAGGTAAATAAAAGTTCTATAGTTTCCCAAAATATTACCCCTTACTTAAGTCTATTTGATTGTATTTGTGCTATTTGTAATAGGAGGGGGACTTGGGGGTAAGAAGGAATCTGGACAACTTCGATTTGGAGGAAGAGAAAGACCTTTTCGAGCTCCCTTGTATGCTTTGCTTCCCTGATTATATATACTCTCTACTTTCTTTTGCATGGATTTTAGTTCTGCTTCCTCGATTCTCATGTAATGCGAAATAATGTTTTGTTGGCATATAAACATGGTATGGTCTGAACTTCTGTTATACTTATCTTCTCCCAACACGTCGTTACTTGATCGGTCATTATACACCTTGAACTTGGACTCAGCATGGTTGAAGGCTTTCATCTCATGTTCTACGACTGTTCCTGGAATATTCTCTTTCCTGTTGAATGACTGTTCTTGATGATGTGATTCCTCACTATTTATCCTTGATTTTGCTTCAAAAAAGTGTTCTGCACCTTGAGTAATAAAGTTATAAGAGACGTAGAATGATAATATGTCCGAGCCCAATCGATAATATGTAAACTCCCGTTATTTTCCAATCTTATAGTTATAGCAAAGAACTTCAATCATTAGGTGGCTTTCTTTGACTTCTGGTGACTTTATTTGCTTAATCAGGGCAGGGAGGGTTTGATCAGGATTTTCTTAATCAGATTCTTCATTAGTCATTCTTTTCGTGTGCATTTACGTCATCCGCTGACTCAACGTCTCTATCACATACCCTTTTGTGCAGACGTCCGATACCTCATGACGATTTGAAAAGGCTTGGCATTACTCCTCCACCTGAAGGAAGATACATGTCCAGGTTTCAGGTAACTGTTAAAACAAGGAACACATAAGCTTTATGAACTTCGATTTTCGTACAAATGGAAGAACCTTAATGTCCGTTCACGGTGCCAATCTTCTGCTCTTGTACTTGATATTTTGTAATGCAATGAACGATCACTTGACTTAAACTGAGGTCGGGATACTGCAACACCGGACGTAATTGATTTTTTGTTGGTTCCTTGTTCGTTCTACTTTAGGTACCTTCTCCTCCGAGAAGAGAAACAGATTCGGTACATAGGGAAGAAGGCTCCAGTGTGAAAGATTCCGTGGAGAAGGATGGACATAGTCGAAGTAGTTCTACAGATGGAGATGATTGGTCTCATACGAGGAGCCCTGATGGCTACAGAGGAGGGCACTCTCATAAGGGGAACTACGAGAAGATGAAACATGAATCTAGAAGGGGTTCAAACGACAAGGAAGATTATTATCAGAGGAGCTCTTCTGAGAAGGAAGATCGTTATCGGAGGCGCTCATCGGACAAGGAACGATCTCGCAGAAGGGATTCTAATGATAGAGATGATCACTCACGTAAACGTCACAAATCTCGCAGATAGACTCTCCATTATCCCTAAATTTTCCCAGTTTCTATTTAAGCTATTCAACTAATGTTCATCTGAGGCATGCAGGCATTTGAGGATGAACTTGATTGCTTAATACACGAGTTCAGGTGACGTATTTGTACCCAGTAATCTGCTGCTGACAAATGCCGTCCATCCATTAACCGAAGGGAACGTTATGAAATGAGGTGAGGATATGGTATTTGGTTAATTTAGAAATATGCAAGTATATAGGTCCTGTGAGTGTTATGCTAAGAGGAATTTCAAGAACAAGTTTGGCATTTCAGTGATACTCCTTAGTGTTGTTTAGAAATGATCAATGATACTCTTATCTGTTGCGTAATGCGTTATGCCCAAGATTTGAAATCTAGATACAACGATTCT

mRNA sequence

CGAACAAACTCGTTGGGGTGTTGGTCAATTGTCTCTCTACTCTGTAGCTAAAAATCTCGGCTGAAACGAGGGGGAGTAAGACGACGAGTGGGCTTGGCGCGCCATGAGCGGGAGCAACGTAAGCAAGGTCTTCTACGCCGAGAATTACCATCCAATTCAAGCCGGCAGCATCGACGGCACCGATATTCTTCCCCACGACAATGCCGTCTACCGAGCATTGCTATGTTCCGCTGCTGGCCTCTATGATCCCCTTCGCGATCCCAAGGTCTTCGGTGACCCTTATTGCACCCTCTTCGTTGGTCGCCTTTCTCATCTGACTACCGAAGATAATCTTCGTAGGGTATTGTCTATTGACCTCACTAATTGCTTGTTATTGACTGATTCTGATGAGGTTGCTGGTGATTACCTAATGACTGGACAGTCAGTGACCGAAGTCACTGTGAATGGCCACCATAACTATGAAGTAACTGGTTCTTCACGTGGTTATGCTTTTGTTGAATATGAAACTGAAAAAGAGATGCGACATGCATATAAGGATGCTCATCATTCAATGATAGATGATTGCGAAATTATAGTTGACTACAATCGACAACAGCTAATGCCCGGATGGATTCCACGAAGATTAGGAGGGGGACTTGGGGGTAAGAAGGAATCTGGACAACTTCGATTTGGAGGAAGAGAAAGACCTTTTCGAGCTCCCTTACGTCCGATACCTCATGACGATTTGAAAAGGCTTGGCATTACTCCTCCACCTGAAGGAAGATACATGTCCAGGTTTCAGGTACCTTCTCCTCCGAGAAGAGAAACAGATTCGGTACATAGGGAAGAAGGCTCCAGTGTGAAAGATTCCGTGGAGAAGGATGGACATAGTCGAAGTAGTTCTACAGATGGAGATGATTGGTCTCATACGAGGAGCCCTGATGGCTACAGAGGAGGGCACTCTCATAAGGGGAACTACGAGAAGATGAAACATGAATCTAGAAGGGGTTCAAACGACAAGGAAGATTATTATCAGAGGAGCTCTTCTGAGAAGGAAGATCGTTATCGGAGGCGCTCATCGGACAAGGAACGATCTCGCAGAAGGGATTCTAATGATAGAGATGATCACTCACGTAAACGTCACAAATCTCGCAGATAGACTCTCCATTATCCCTAAATTTTCCCAGTTTCTATTTAAGCTATTCAACTAATGTTCATCTGAGGCATGCAGGCATTTGAGGATGAACTTGATTGCTTAATACACGAGTTCAGGTGACGTATTTGTACCCAGTAATCTGCTGCTGACAAATGCCGTCCATCCATTAACCGAAGGGAACGTTATGAAATGAGGTGAGGATATGGTATTTGGTTAATTTAGAAATATGCAAGTATATAGGTCCTGTGAGTGTTATGCTAAGAGGAATTTCAAGAACAAGTTTGGCATTTCAGTGATACTCCTTAGTGTTGTTTAGAAATGATCAATGATACTCTTATCTGTTGCGTAATGCGTTATGCCCAAGATTTGAAATCTAGATACAACGATTCT

Coding sequence (CDS)

ATGAGCGGGAGCAACGTAAGCAAGGTCTTCTACGCCGAGAATTACCATCCAATTCAAGCCGGCAGCATCGACGGCACCGATATTCTTCCCCACGACAATGCCGTCTACCGAGCATTGCTATGTTCCGCTGCTGGCCTCTATGATCCCCTTCGCGATCCCAAGGTCTTCGGTGACCCTTATTGCACCCTCTTCGTTGGTCGCCTTTCTCATCTGACTACCGAAGATAATCTTCGTAGGGTATTGTCTATTGACCTCACTAATTGCTTGTTATTGACTGATTCTGATGAGGTTGCTGGTGATTACCTAATGACTGGACAGTCAGTGACCGAAGTCACTGTGAATGGCCACCATAACTATGAAGTAACTGGTTCTTCACGTGGTTATGCTTTTGTTGAATATGAAACTGAAAAAGAGATGCGACATGCATATAAGGATGCTCATCATTCAATGATAGATGATTGCGAAATTATAGTTGACTACAATCGACAACAGCTAATGCCCGGATGGATTCCACGAAGATTAGGAGGGGGACTTGGGGGTAAGAAGGAATCTGGACAACTTCGATTTGGAGGAAGAGAAAGACCTTTTCGAGCTCCCTTACGTCCGATACCTCATGACGATTTGAAAAGGCTTGGCATTACTCCTCCACCTGAAGGAAGATACATGTCCAGGTTTCAGGTACCTTCTCCTCCGAGAAGAGAAACAGATTCGGTACATAGGGAAGAAGGCTCCAGTGTGAAAGATTCCGTGGAGAAGGATGGACATAGTCGAAGTAGTTCTACAGATGGAGATGATTGGTCTCATACGAGGAGCCCTGATGGCTACAGAGGAGGGCACTCTCATAAGGGGAACTACGAGAAGATGAAACATGAATCTAGAAGGGGTTCAAACGACAAGGAAGATTATTATCAGAGGAGCTCTTCTGAGAAGGAAGATCGTTATCGGAGGCGCTCATCGGACAAGGAACGATCTCGCAGAAGGGATTCTAATGATAGAGATGATCACTCACGTAAACGTCACAAATCTCGCAGATAG

Protein sequence

MSGSNVSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCSAAGLYDPLRDPKVFGDPYCTLFVGRLSHLTTEDNLRRVLSIDLTNCLLLTDSDEVAGDYLMTGQSVTEVTVNGHHNYEVTGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIPHDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSVHREEGSSVKDSVEKDGHSRSSSTDGDDWSHTRSPDGYRGGHSHKGNYEKMKHESRRGSNDKEDYYQRSSSEKEDRYRRRSSDKERSRRRDSNDRDDHSRKRHKSRR
Homology
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BLAST of Carg15509 vs. NCBI nr
Match: XP_022936561.1 (U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Cucurbita moschata])

HSP 1 Score: 419.9 bits (1078), Expect = 8.6e-114
Identity = 211/253 (83.40%), Postives = 216/253 (85.38%), Query Frame = 0 

Query: 1   MSGSNVSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCSAAGLYDPLRDPKVFGDPY 60
           MSGSNVSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCS+AGLYDPLRDPKVFGDPY
Sbjct: 1   MSGSNVSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPLRDPKVFGDPY 60

Query: 61  CTLFVGRLSHLTTEDNLRRVLSI--DLTNCLLLTDSDEVAGDYLMTGQSVTEVTVNGHHN 120
           CTLFVGRLSHLTTEDNLRR +S    + N  L+                           
Sbjct: 61  CTLFVGRLSHLTTEDNLRRAMSKYGRIKNLRLV--------------------------R 120

Query: 121 YEVTGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGL 180
           + VTGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGL
Sbjct: 121 HIVTGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGL 180

Query: 181 GGKKESGQLRFGGRERPFRAPLRPIPHDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSV 240
           GGKKESGQLRFGGRERPFRAPLRPIPHDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSV
Sbjct: 181 GGKKESGQLRFGGRERPFRAPLRPIPHDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSV 227

Query: 241 HREEGSSVKDSVE 252
            REEGSSVKDSVE
Sbjct: 241 RREEGSSVKDSVE 227

[Close]
BLAST of Carg15509 vs. NCBI nr
Match: XP_022972289.1 (U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Cucurbita maxima])

HSP 1 Score: 414.5 bits (1064), Expect = 3.6e-112
Identity = 209/252 (82.94%), Postives = 215/252 (85.32%), Query Frame = 0 

Query: 1   MSGSNVSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCSAAGLYDPLRDPKVFGDPY 60
           MSGSNVSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCS+AGLYDPLRDPKVFGDPY
Sbjct: 1   MSGSNVSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPLRDPKVFGDPY 60

Query: 61  CTLFVGRLSHLTTEDNLRRVLSI--DLTNCLLLTDSDEVAGDYLMTGQSVTEVTVNGHHN 120
           CTLFVGRLSHLTTED+LRR +S    + N  L+                           
Sbjct: 61  CTLFVGRLSHLTTEDSLRRAMSKYGRVKNLRLV--------------------------R 120

Query: 121 YEVTGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGL 180
           + VTGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGL
Sbjct: 121 HIVTGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGL 180

Query: 181 GGKKESGQLRFGGRERPFRAPLRPIPHDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSV 240
           GGKKESGQLRFGGRERPFRAPLRPIPHDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSV
Sbjct: 181 GGKKESGQLRFGGRERPFRAPLRPIPHDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSV 226

Query: 241 HREEGSSVKDSV 251
            REEGSSVKDSV
Sbjct: 241 CREEGSSVKDSV 226

[Close]
BLAST of Carg15509 vs. NCBI nr
Match: XP_023538864.1 (U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 413.7 bits (1062), Expect = 6.2e-112
Identity = 208/253 (82.21%), Postives = 214/253 (84.58%), Query Frame = 0 

Query: 1   MSGSNVSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCSAAGLYDPLRDPKVFGDPY 60
           MSGSNVSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCS+AGLYDPLRDPKVFGDPY
Sbjct: 1   MSGSNVSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPLRDPKVFGDPY 60

Query: 61  CTLFVGRLSHLTTEDNLRRVLSI--DLTNCLLLTDSDEVAGDYLMTGQSVTEVTVNGHHN 120
           CTLFVGRLSHLTTED+LRR +S    + N  L+                           
Sbjct: 61  CTLFVGRLSHLTTEDSLRRAMSKYGRVKNLRLV--------------------------R 120

Query: 121 YEVTGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGL 180
           + VTGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGL
Sbjct: 121 HIVTGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGL 180

Query: 181 GGKKESGQLRFGGRERPFRAPLRPIPHDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSV 240
           GGKKESGQLRFGGRERPFRAPLRPIPHDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSV
Sbjct: 181 GGKKESGQLRFGGRERPFRAPLRPIPHDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSV 227

Query: 241 HREEGSSVKDSVE 252
            REE S VKDSVE
Sbjct: 241 RREESSGVKDSVE 227

[Close]
BLAST of Carg15509 vs. NCBI nr
Match: XP_022138184.1 (U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Momordica charantia])

HSP 1 Score: 392.5 bits (1007), Expect = 1.5e-105
Identity = 198/253 (78.26%), Postives = 209/253 (82.61%), Query Frame = 0 

Query: 1   MSGSNVSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCSAAGLYDPLRDPKVFGDPY 60
           M+GSNV+KVF+AENYHPIQAGSIDGTDILPHDNAVYRALLCS+AGLYDPL DPKV GDPY
Sbjct: 1   MNGSNVNKVFFAENYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPLGDPKVSGDPY 60

Query: 61  CTLFVGRLSHLTTEDNLRRVLSI--DLTNCLLLTDSDEVAGDYLMTGQSVTEVTVNGHHN 120
           CTLFVGRLSHLT ED LRR +S    + N  L+                           
Sbjct: 61  CTLFVGRLSHLTDEDTLRRAMSKYGRVKNLRLV--------------------------R 120

Query: 121 YEVTGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGL 180
           + VTGSSRGYAFVEYETEKEMR AYKDAHHSMIDDCEIIVDYNRQQLMPGW+PRRLGGGL
Sbjct: 121 HIVTGSSRGYAFVEYETEKEMRRAYKDAHHSMIDDCEIIVDYNRQQLMPGWVPRRLGGGL 180

Query: 181 GGKKESGQLRFGGRERPFRAPLRPIPHDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSV 240
           GGKKESGQLRFGGRERPFRAPLRPIP DDLKRLGITPPPEGRYMSRFQVPSPPRRETDSV
Sbjct: 181 GGKKESGQLRFGGRERPFRAPLRPIPFDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSV 227

Query: 241 HREEGSSVKDSVE 252
            REEGSS +DS+E
Sbjct: 241 CREEGSSERDSLE 227

[Close]
BLAST of Carg15509 vs. NCBI nr
Match: XP_008439055.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X1 [Cucumis melo])

HSP 1 Score: 388.7 bits (997), Expect = 2.1e-104
Identity = 196/251 (78.09%), Postives = 208/251 (82.87%), Query Frame = 0 

Query: 1   MSGSNVSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCSAAGLYDPLRDPKVFGDPY 60
           MSGSNV+KVFYA+NYHPIQAGSIDGTDILPHDNAVYRALLCS+AGLYDP  DPKVFGDPY
Sbjct: 1   MSGSNVNKVFYADNYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 60

Query: 61  CTLFVGRLSHLTTEDNLRRVLSIDLTNCLLLTDSDEVAGDYLMTGQSVTEVTVNGHHNYE 120
           CTLFVGRLSHLTTED LRR +S                      GQ V ++ +  H    
Sbjct: 61  CTLFVGRLSHLTTEDTLRRAMS--------------------KYGQ-VKDLRLVRH---I 120

Query: 121 VTGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGLGG 180
           VTGSSRGYAFVEYETEKEMR AYKDAHHSMIDDCEIIVDYNRQ+LM GWIPRRLGGGLGG
Sbjct: 121 VTGSSRGYAFVEYETEKEMRRAYKDAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGG 180

Query: 181 KKESGQLRFGGRERPFRAPLRPIPHDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSVHR 240
           KKESGQLRFGGRERPFRAPLRPIP+DDLKRLGITPPPEGRYMSRFQ+PSPPRRETDS  R
Sbjct: 181 KKESGQLRFGGRERPFRAPLRPIPYDDLKRLGITPPPEGRYMSRFQIPSPPRRETDSERR 227

Query: 241 EEGSSVKDSVE 252
           EEGS+  +  E
Sbjct: 241 EEGSNKNEPTE 227

[Close]
BLAST of Carg15509 vs. TAIR10
Match: AT2G43370.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 315.8 bits (808), Expect = 3.2e-86
Identity = 163/243 (67.08%), Postives = 180/243 (74.07%), Query Frame = 0 

Query: 3   GSN-VSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCSAAGLYDPLRDPKVFGDPYC 62
           G+N V+KVFYA +YHPIQAGSIDGTD+ PHDN V RALLC  AGLYDP  D K  GDPYC
Sbjct: 5   GNNVVNKVFYATSYHPIQAGSIDGTDVAPHDNGVRRALLCYNAGLYDPSGDSKAVGDPYC 64

Query: 63  TLFVGRLSHLTTEDNLRRVLSI--DLTNCLLLTDSDEVAGDYLMTGQSVTEVTVNGHHNY 122
           TLFVGRLSH TTED LR V+S    + N  L+                           +
Sbjct: 65  TLFVGRLSHHTTEDTLREVMSKYGRIKNLRLV--------------------------RH 124

Query: 123 EVTGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGLG 182
            VTG+SRGY FVEYETEKEM  AY+DAHHS+ID  EIIVDYNRQQLMPGWIPRRLGGGLG
Sbjct: 125 IVTGASRGYGFVEYETEKEMLRAYEDAHHSLIDGREIIVDYNRQQLMPGWIPRRLGGGLG 184

Query: 183 GKKESGQLRFGGRERPFRAPLRPIPHDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSVH 242
           G+KESGQLRFGGR+RPFRAPLRPIPH+DLK+LGI  PPEGRYMSR Q+PSPPRR+     
Sbjct: 185 GRKESGQLRFGGRDRPFRAPLRPIPHEDLKKLGIQLPPEGRYMSRTQIPSPPRRKGSVSD 221

[Close]
BLAST of Carg15509 vs. TAIR10
Match: AT3G50670.1 (U1 small nuclear ribonucleoprotein-70K)

HSP 1 Score: 90.5 bits (223), Expect = 2.2e-18
Identity = 51/149 (34.23%), Postives = 73/149 (48.99%), Query Frame = 0 

Query: 47  YDPLRDPKVFGDPYCTLFVGRLSHLTTEDNLRRVLSIDLTNCLLLTDSDEVAGDYLMTGQ 106
           YDP  DP   GDPY TLFV RL++ ++E  ++R                 +   +L+T Q
Sbjct: 124 YDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFE----------SYGPIKRVHLVTDQ 183

Query: 107 SVTEVTVNGHHNYEVTGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLM 166
                         +T   +GYAF+EY   ++M+ AYK A    ID   ++VD  R + +
Sbjct: 184 --------------LTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDGRRVLVDVERGRTV 243

Query: 167 PGWIPRRLGGGLGGKKESGQLRFGGRERP 196
           P W PRRLGGGLG  +  G     G ++P
Sbjct: 244 PNWRPRRLGGGLGTSRVGGGEEIVGEQQP 248

[Close]
BLAST of Carg15509 vs. Swiss-Prot
Match: sp|Q8VY74|U1135_ARATH (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP35 PE=1 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 5.7e-85
Identity = 163/243 (67.08%), Postives = 180/243 (74.07%), Query Frame = 0 

Query: 3   GSN-VSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCSAAGLYDPLRDPKVFGDPYC 62
           G+N V+KVFYA +YHPIQAGSIDGTD+ PHDN V RALLC  AGLYDP  D K  GDPYC
Sbjct: 5   GNNVVNKVFYATSYHPIQAGSIDGTDVAPHDNGVRRALLCYNAGLYDPSGDSKAVGDPYC 64

Query: 63  TLFVGRLSHLTTEDNLRRVLSI--DLTNCLLLTDSDEVAGDYLMTGQSVTEVTVNGHHNY 122
           TLFVGRLSH TTED LR V+S    + N  L+                           +
Sbjct: 65  TLFVGRLSHHTTEDTLREVMSKYGRIKNLRLV--------------------------RH 124

Query: 123 EVTGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGLG 182
            VTG+SRGY FVEYETEKEM  AY+DAHHS+ID  EIIVDYNRQQLMPGWIPRRLGGGLG
Sbjct: 125 IVTGASRGYGFVEYETEKEMLRAYEDAHHSLIDGREIIVDYNRQQLMPGWIPRRLGGGLG 184

Query: 183 GKKESGQLRFGGRERPFRAPLRPIPHDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSVH 242
           G+KESGQLRFGGR+RPFRAPLRPIPH+DLK+LGI  PPEGRYMSR Q+PSPPRR+     
Sbjct: 185 GRKESGQLRFGGRDRPFRAPLRPIPHEDLKKLGIQLPPEGRYMSRTQIPSPPRRKGSVSD 221

[Close]
BLAST of Carg15509 vs. Swiss-Prot
Match: sp|Q16560|U1SBP_HUMAN (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP35 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.6e-39
Identity = 97/204 (47.55%), Postives = 121/204 (59.31%), Query Frame = 0 

Query: 12  AENYHPIQAGSIDGTDILPHDNAVYRALLCSAAGLYDPLRDPKVFGDPYCTLFVGRLSHL 71
           A+ Y P++AGSIDGTD  PHD AV+RA+L      Y P  +  V GDP  TLFV RL+  
Sbjct: 8   AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDPLLTLFVARLNLQ 67

Query: 72  TTEDNLRRVLSI--DLTNCLLLTDSDEVAGDYLMTGQSVTEVTVNGHHNYEVTGSSRGYA 131
           T ED L+ V S   D+    L+ D                           VTG S+GYA
Sbjct: 68  TKEDKLKEVFSRYGDIRRLRLVRDL--------------------------VTGFSKGYA 127

Query: 132 FVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGLGGKKESGQLRF 191
           F+EY+ E+ +  AY+DA   +ID  EI VDY  ++ + GWIPRRLGGGLGGKKESGQLRF
Sbjct: 128 FIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQLRF 179

Query: 192 GGRERPFRAPLR-PIPHDDLKRLG 213
           GGR+RPFR P+  P+  +DL R G
Sbjct: 188 GGRDRPFRKPINLPVVKNDLYREG 179

[Close]
BLAST of Carg15509 vs. Swiss-Prot
Match: sp|Q1LZH0|U1SBP_BOVIN (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Bos taurus OX=9913 GN=SNRNP35 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.1e-38
Identity = 95/204 (46.57%), Postives = 120/204 (58.82%), Query Frame = 0 

Query: 12  AENYHPIQAGSIDGTDILPHDNAVYRALLCSAAGLYDPLRDPKVFGDPYCTLFVGRLSHL 71
           A+ Y P++AGSIDGTD  PHD AV+RA+L      Y P  +  V GDP  TLFV RL+  
Sbjct: 8   AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YTP--NKGVTGDPLLTLFVARLNLQ 67

Query: 72  TTEDNLRRVLSI--DLTNCLLLTDSDEVAGDYLMTGQSVTEVTVNGHHNYEVTGSSRGYA 131
           T E+ L+ V S   D+    L+ D                           VTG S+GYA
Sbjct: 68  TKEEKLKEVFSRYGDIRRLRLVRDL--------------------------VTGFSKGYA 127

Query: 132 FVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGLGGKKESGQLRF 191
           F+EY+ E+ +  AY+DA   +ID  EI VDY  ++ + GWIPRRLGGGLGGKKESGQLRF
Sbjct: 128 FIEYKDERSLLKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQLRF 179

Query: 192 GGRERPFRAPLR-PIPHDDLKRLG 213
           GGR+RPFR P+  P+  +D  R G
Sbjct: 188 GGRDRPFRKPINLPVVKNDQFREG 179

[Close]
BLAST of Carg15509 vs. Swiss-Prot
Match: sp|Q5U1W5|U1SBP_RAT (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Rattus norvegicus OX=10116 GN=Snrnp35 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 9.0e-38
Identity = 96/206 (46.60%), Postives = 121/206 (58.74%), Query Frame = 0 

Query: 12  AENYHPIQAGSIDGTDILPHDNAVYRALLCSAAGLYDPLRDPKVFGDPYCTLFVGRLSHL 71
           A+ Y P++AGSIDGTD  PHD AV+RA+L      Y P  +  V GDP  TLFV RL+  
Sbjct: 8   AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVTGDPLLTLFVARLNSQ 67

Query: 72  TTEDNLRRVLSI--DLTNCLLLTDSDEVAGDYLMTGQSVTEVTVNGHHNYEVTGSSRGYA 131
           T E+ L+ V S   D+    L+ D                           VTG S+GYA
Sbjct: 68  TKEEKLKEVFSRYGDIRRLRLVRDL--------------------------VTGFSKGYA 127

Query: 132 FVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGLGGKKESGQLRF 191
           F+EY+ E+ +  AY+DA   +ID  EI VDY  ++ + GWIPRRLGGGLGGKKESGQLRF
Sbjct: 128 FIEYKEERALLKAYRDADGLVIDQHEIFVDYELERTLRGWIPRRLGGGLGGKKESGQLRF 181

Query: 192 GGRERPFRAPLR-PI----PHDDLKR 211
           GGR+RPFR P+  P+    PH + KR
Sbjct: 188 GGRDRPFRKPINLPVVKNEPHREGKR 181

[Close]
BLAST of Carg15509 vs. Swiss-Prot
Match: sp|Q9D384|U1SBP_MOUSE (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Mus musculus OX=10090 GN=Snrnp35 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-37
Identity = 96/206 (46.60%), Postives = 121/206 (58.74%), Query Frame = 0 

Query: 12  AENYHPIQAGSIDGTDILPHDNAVYRALLCSAAGLYDPLRDPKVFGDPYCTLFVGRLSHL 71
           A+ Y P++AGSIDGTD  PHD AV+RA+L      Y P  +  V GDP  TLFV RL+  
Sbjct: 8   AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVTGDPLLTLFVARLNLQ 67

Query: 72  TTEDNLRRVLSI--DLTNCLLLTDSDEVAGDYLMTGQSVTEVTVNGHHNYEVTGSSRGYA 131
           T E+ L+ V S   D+    L+ D                           VTG S+GYA
Sbjct: 68  TKEEKLKEVFSRYGDIRRLRLVRDL--------------------------VTGFSKGYA 127

Query: 132 FVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGLGGKKESGQLRF 191
           F+EY+ E+ +  AY+DA   +ID  EI VDY  ++ + GWIPRRLGGGLGGKKESGQLRF
Sbjct: 128 FIEYKEERALMKAYRDADGLVIDQHEIFVDYELERTLRGWIPRRLGGGLGGKKESGQLRF 181

Query: 192 GGRERPFRAPLR-PI----PHDDLKR 211
           GGR+RPFR P+  P+    PH + KR
Sbjct: 188 GGRDRPFRKPINLPVVKNEPHREGKR 181

[Close]
BLAST of Carg15509 vs. TrEMBL
Match: tr|A0A1S3AXF1|A0A1S3AXF1_CUCME (U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483955 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.4e-104
Identity = 196/251 (78.09%), Postives = 208/251 (82.87%), Query Frame = 0 

Query: 1   MSGSNVSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCSAAGLYDPLRDPKVFGDPY 60
           MSGSNV+KVFYA+NYHPIQAGSIDGTDILPHDNAVYRALLCS+AGLYDP  DPKVFGDPY
Sbjct: 1   MSGSNVNKVFYADNYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 60

Query: 61  CTLFVGRLSHLTTEDNLRRVLSIDLTNCLLLTDSDEVAGDYLMTGQSVTEVTVNGHHNYE 120
           CTLFVGRLSHLTTED LRR +S                      GQ V ++ +  H    
Sbjct: 61  CTLFVGRLSHLTTEDTLRRAMS--------------------KYGQ-VKDLRLVRH---I 120

Query: 121 VTGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGLGG 180
           VTGSSRGYAFVEYETEKEMR AYKDAHHSMIDDCEIIVDYNRQ+LM GWIPRRLGGGLGG
Sbjct: 121 VTGSSRGYAFVEYETEKEMRRAYKDAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGG 180

Query: 181 KKESGQLRFGGRERPFRAPLRPIPHDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSVHR 240
           KKESGQLRFGGRERPFRAPLRPIP+DDLKRLGITPPPEGRYMSRFQ+PSPPRRETDS  R
Sbjct: 181 KKESGQLRFGGRERPFRAPLRPIPYDDLKRLGITPPPEGRYMSRFQIPSPPRRETDSERR 227

Query: 241 EEGSSVKDSVE 252
           EEGS+  +  E
Sbjct: 241 EEGSNKNEPTE 227

[Close]
BLAST of Carg15509 vs. TrEMBL
Match: tr|A0A1S4DT11|A0A1S4DT11_CUCME (U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483955 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.6e-103
Identity = 194/251 (77.29%), Postives = 206/251 (82.07%), Query Frame = 0 

Query: 1   MSGSNVSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCSAAGLYDPLRDPKVFGDPY 60
           MSGSNV+KVFYA+NYHPIQAGSIDGTDILPHDNAVYRALLCS+AGLYDP  DPKVFGDPY
Sbjct: 1   MSGSNVNKVFYADNYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 60

Query: 61  CTLFVGRLSHLTTEDNLRRVLSIDLTNCLLLTDSDEVAGDYLMTGQSVTEVTVNGHHNYE 120
           CTLFVGRLSHLTTED LRR +S                      GQ V ++ +  H    
Sbjct: 61  CTLFVGRLSHLTTEDTLRRAMS--------------------KYGQ-VKDLRLVRH---- 120

Query: 121 VTGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGLGG 180
             GSSRGYAFVEYETEKEMR AYKDAHHSMIDDCEIIVDYNRQ+LM GWIPRRLGGGLGG
Sbjct: 121 -IGSSRGYAFVEYETEKEMRRAYKDAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGG 180

Query: 181 KKESGQLRFGGRERPFRAPLRPIPHDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSVHR 240
           KKESGQLRFGGRERPFRAPLRPIP+DDLKRLGITPPPEGRYMSRFQ+PSPPRRETDS  R
Sbjct: 181 KKESGQLRFGGRERPFRAPLRPIPYDDLKRLGITPPPEGRYMSRFQIPSPPRRETDSERR 225

Query: 241 EEGSSVKDSVE 252
           EEGS+  +  E
Sbjct: 241 EEGSNKNEPTE 225

[Close]
BLAST of Carg15509 vs. TrEMBL
Match: tr|A0A218XRW5|A0A218XRW5_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr000352 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.6e-92
Identity = 178/252 (70.63%), Postives = 193/252 (76.59%), Query Frame = 0 

Query: 4   SNVSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCSAAGLYDPLRDPKVFGDPYCTL 63
           +N++ VFYAE+YHPIQAGSIDGTDILPHDNAVYRA LCS+AGLYDPL DPKV GDPYCTL
Sbjct: 3   NNLNSVFYAESYHPIQAGSIDGTDILPHDNAVYRAHLCSSAGLYDPLGDPKVIGDPYCTL 62

Query: 64  FVGRLSHLTTEDNLRRVLSI--DLTNCLLLTDSDEVAGDYLMTGQSVTEVTVNGHHNYEV 123
           FVGRLSH TTE  LR  +S    + N  L+                           + V
Sbjct: 63  FVGRLSHFTTEGTLREAMSKYGRVKNLRLV--------------------------RHIV 122

Query: 124 TGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGLGGK 183
           TG+SRGYAFVE+ETE+EMR AYKDAHHS IDD EIIVDYNRQQLMPGWIPRRLGGGLGGK
Sbjct: 123 TGASRGYAFVEFETEREMRRAYKDAHHSFIDDSEIIVDYNRQQLMPGWIPRRLGGGLGGK 182

Query: 184 KESGQLRFGGRERPFRAPLRPIPHDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSVHRE 243
           KESGQLRFGGRERPFRAPLRPIP+D+LKRLGI PPPEGRYMSRFQVPSPPRRE  S   E
Sbjct: 183 KESGQLRFGGRERPFRAPLRPIPYDELKRLGIPPPPEGRYMSRFQVPSPPRREKSSPDLE 228

Query: 244 EGS--SVKDSVE 252
            GS  S KD  +
Sbjct: 243 RGSRRSSKDRAD 228

[Close]
BLAST of Carg15509 vs. TrEMBL
Match: tr|A0A251QYQ3|A0A251QYQ3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G172700 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.7e-92
Identity = 175/245 (71.43%), Postives = 194/245 (79.18%), Query Frame = 0 

Query: 1   MSGS--NVSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCSAAGLYDPLRDPKVFGD 60
           MSG   NV+ VFYAE YHP+QAGSIDGTDILPHDNAVYRA LCS+AGLYDPL DPK+ GD
Sbjct: 3   MSGRNVNVNSVFYAEAYHPVQAGSIDGTDILPHDNAVYRAFLCSSAGLYDPLGDPKLIGD 62

Query: 61  PYCTLFVGRLSHLTTEDNLRRVLSIDLTNCLLLTDSDEVAGDYLMTGQSVTEVTVNGHHN 120
           PYCTLFVG LSHLTTE +LR+ LS                         V ++ +  H  
Sbjct: 63  PYCTLFVGHLSHLTTEQSLRKALS---------------------KYGRVKDLRLVRH-- 122

Query: 121 YEVTGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGL 180
             VTG+SRGYAFVEYETE+EM+ AYK+AHHS IDD E+IVDYNRQQLMPGWIPRRLGGGL
Sbjct: 123 -IVTGASRGYAFVEYETEREMQRAYKEAHHSFIDDSEVIVDYNRQQLMPGWIPRRLGGGL 182

Query: 181 GGKKESGQLRFGGRERPFRAPLRPIPHDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSV 240
           GGKKESGQLRFGGRERPFRAPLR IP+DDL+RLGI PPPEGRYMSR+QVPSPPRR+ +SV
Sbjct: 183 GGKKESGQLRFGGRERPFRAPLRSIPYDDLERLGIPPPPEGRYMSRYQVPSPPRRKRNSV 223

Query: 241 HREEG 244
            REEG
Sbjct: 243 DREEG 223

[Close]
BLAST of Carg15509 vs. TrEMBL
Match: tr|M5XPC0|M5XPC0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa024322mg PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.7e-92
Identity = 175/245 (71.43%), Postives = 194/245 (79.18%), Query Frame = 0 

Query: 1   MSGS--NVSKVFYAENYHPIQAGSIDGTDILPHDNAVYRALLCSAAGLYDPLRDPKVFGD 60
           MSG   NV+ VFYAE YHP+QAGSIDGTDILPHDNAVYRA LCS+AGLYDPL DPK+ GD
Sbjct: 1   MSGRNVNVNSVFYAEAYHPVQAGSIDGTDILPHDNAVYRAFLCSSAGLYDPLGDPKLIGD 60

Query: 61  PYCTLFVGRLSHLTTEDNLRRVLSIDLTNCLLLTDSDEVAGDYLMTGQSVTEVTVNGHHN 120
           PYCTLFVG LSHLTTE +LR+ LS                         V ++ +  H  
Sbjct: 61  PYCTLFVGHLSHLTTEQSLRKALS---------------------KYGRVKDLRLVRH-- 120

Query: 121 YEVTGSSRGYAFVEYETEKEMRHAYKDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGL 180
             VTG+SRGYAFVEYETE+EM+ AYK+AHHS IDD E+IVDYNRQQLMPGWIPRRLGGGL
Sbjct: 121 -IVTGASRGYAFVEYETEREMQRAYKEAHHSFIDDSEVIVDYNRQQLMPGWIPRRLGGGL 180

Query: 181 GGKKESGQLRFGGRERPFRAPLRPIPHDDLKRLGITPPPEGRYMSRFQVPSPPRRETDSV 240
           GGKKESGQLRFGGRERPFRAPLR IP+DDL+RLGI PPPEGRYMSR+QVPSPPRR+ +SV
Sbjct: 181 GGKKESGQLRFGGRERPFRAPLRSIPYDDLERLGIPPPPEGRYMSRYQVPSPPRRKRNSV 221

Query: 241 HREEG 244
            REEG
Sbjct: 241 DREEG 221

The following BLAST results are available for this feature:
BLAST of Carg15509 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022936561.18.6e-11483.40U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Cucurbita moschata][more]
XP_022972289.13.6e-11282.94U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Cucurbita maxima][more]
XP_023538864.16.2e-11282.21U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Cucurbita pepo subsp. pe... [more]
XP_022138184.11.5e-10578.26U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Momordica charantia][more]
XP_008439055.12.1e-10478.09PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X1 [Cu... [more]
BLAST of Carg15509 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G43370.13.2e-8667.08RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT3G50670.12.2e-1834.23U1 small nuclear ribonucleoprotein-70K[more]
BLAST of Carg15509 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8VY74|U1135_ARATH5.7e-8567.08U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Arabidopsis thaliana O... [more]
sp|Q16560|U1SBP_HUMAN3.6e-3947.55U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Homo sapiens OX=9606 G... [more]
sp|Q1LZH0|U1SBP_BOVIN3.1e-3846.57U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Bos taurus OX=9913 GN=... [more]
sp|Q5U1W5|U1SBP_RAT9.0e-3846.60U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Rattus norvegicus OX=1... [more]
sp|Q9D384|U1SBP_MOUSE1.2e-3746.60U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Mus musculus OX=10090 ... [more]
BLAST of Carg15509 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AXF1|A0A1S3AXF1_CUCME1.4e-10478.09U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X1 OS=Cucumis mel... [more]
tr|A0A1S4DT11|A0A1S4DT11_CUCME1.6e-10377.29U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X2 OS=Cucumis mel... [more]
tr|A0A218XRW5|A0A218XRW5_PUNGR3.6e-9270.63Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr000352 PE=4 SV=1[more]
tr|A0A251QYQ3|A0A251QYQ3_PRUPE4.7e-9271.43Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G172700 PE=4 SV=1[more]
tr|M5XPC0|M5XPC0_PRUPE4.7e-9271.43Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa024322mg PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg15509-RACarg15509-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 62..159
e-value: 7.3E-10
score: 48.8
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 121..156
e-value: 1.9E-6
score: 27.5
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 61..163
score: 11.298
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 48..193
e-value: 2.1E-20
score: 75.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..344
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..336
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..213
NoneNo IPR availablePANTHERPTHR13952U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDcoord: 1..338
NoneNo IPR availablePANTHERPTHR13952:SF6U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 35 KDA PROTEINcoord: 1..338
IPR035979RNA-binding domain superfamilySUPERFAMILYSSF54928RNA-binding domain, RBDcoord: 47..94
coord: 121..191