Carg15494 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15494
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	mitochondrial import receptor subunit TOM40-1-like
Location	Cucurbita_argyrosperma_scaffold_069 : 474631 .. 480067 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCGACCTGGTCCTAGGGTTTTAGAGCATCTACATCCTCTCCGGGGTTTAGAGAGAGAAAGACCTACCTCTCTCCCGCTCTCTTGATCGCTACATTTCTCTGATTTTCAGAAATCTACGTTGCCTCAATCAATCTCCACTCACAATTGTTTTCGACGTGCCATTACCGTTCTAAATTCTTCCACTGTCGTGTTGCTTGGTTCATTTCCGTTTCCTGTAGGTGATAATATACAATGGCTGGCCTTGTCCCTCCGACCACCGCTGCGGCTGCTGCTACGGCGACCGCCCTGCCTGTTCCACCGAAGAAGACAGAGGACGAGAAAGTGGATTACCTGAATCTCCCATGTCCTATCCCCTACGAGGAGATTCACCGTGAAGCTTTCAGTAAGTTTCTGTTCTTTAAAACTGTTGCGTTTGTGACTGAGTTGAGTTTTTTGATGTTTATGATTTGTTATGACAGTGTCTTTGAAGCCGGAGCTGTTTGAAGGAATGCGATTTGATTTCACCAAAGGACTCAATCAAAAGTTCTCCCTCAGCCACAGGTAGTTTTGCTTTTTAGTCATGTGTTTCTTCGGATCTTTTCCCTGCGTCCTGTCTTCTGGGTCACATCGTGAATTGACTTATCTGATAACTATGCGTTGTCCACCATCGACGACTGATCAGCGTGTCTATGGGACCAATGGAGATTCCTGCTCAATCCGCTGAGACCATCAAAATCCCTACTGCCAACTACGAGTTTGGTGCTAACTTTATAGACCCGAAGGTAACCCCACTGACTGCAATTTCGTTGTTTCGTTGTTATATTGAGCTACAACGTGATGGCATTGGTAACTGATATGTAGTTGATGCTTTTTGGGAGGATACTCACCGATGGAAGGCTCAATGCAAGAGTGAAGTGCGATTTATCTGACAATCTCACTTTGAAGGCCAATGCACAGGTAATCTGATGGTTTCTTCTATCAGGTTATCATCAGGTGCTGTCATACTTCCCCTTTCATTCGATTTTATTTGCTGATATCATCCTCTCTTTTTTCTGTCAGCTGACAAATGAGCCACATATGTCACATGGGATGGTCAACTTCGATTATAAGGTTATCAAGTCTTGGAAACTTTACGATCTTACACATTCTTATTTCCACCGTGATGTGATATATTTGTTACGAATATGACCTATATGCTATAGTTATTACTCTTGCCCATCAAAGTGTGGCATTTTTTCTTAGCAATCATGCTTGTCGCTGAACTCAGTTGAGAACAATGTCTTTGAAAAGAAACTATTGCCTTCCTTTATTTATTAGTTGGGTTTCTTCTAAAAATTCCACAGATATATTTACACCGCAAATGTCAGTTGACTAGTAACATCAGCTGTTATTCTATGATGTTTAATTTGGTTGTTAGGTCTCCATCAAGACTTGGATCTTTTCTCTTAAACCTTAACCAATGCAAATTTAGTTCCGGCTCTTGTATAAAGAATGTCTTATGCAAAATGGAATCTATCAATGTGCGTGCTAGGCTTCTTAACCTGAATGGCTGCATTGTAAATCTTTTGGATTTAAACTACTGGTCTCTGGTTCATGAAACCTTGAGATTGTCTACCTTAAATATTAAGCACCCTACGGTTTCTCACTCCAAGAGTTGGAGAGCTAGATAGTAGTTCTAATGTCAGGTTCGGTAATATTTTGGGGAGTGTGGTGGCGGTAAGGGAATTAGGGTTTGGAAAATGCTAGATTTCTCTATTAGATATTTATATTTTAAGCATTTGATTGCCATTATGAGTTACCCGTTCTCATAATTTATGTTTTCCTCTTATTGTTAAACAGTTAAAATTTTGATTAAAAAATATTAATACCTTCGTATTTGTCAATTGGAACTATTTTTGAATCAGGGCAGAGACTTCAGAACCCAGTTTCAATTAGGCAACGGTGCCTTATTTGGAGCAAGCTACATTCAGGTACAATTCTGAATGGTTCTGATTATGATGTTGGTTTGTCCTTTTATAGGTGCTCAAGCATTCTTGATGGCCTTGTACAAGTTTTGGAGTTTAGTTTTTATTGGGAGAATTTTGAAACATTTGCATAAATTTTTTGTTAAATTGGAGATTCTCGTTCAATAGTTTCTCTTTTGGACTTATGTTATTCTGCATTTTGAGGGTATACATTTTTTTTTTTGACAACTGGACTACCTTTTGCTCGTCATCCTTTTTCTCTCCCCTTTTGCTAGTGAATGTACTTGATAAGGATACATTTCCTTCTCCAGCTGCTGGAATCGTATGTTAGATTATGACAATCTCACACTTGCTCGCTATACATGTTCAGGTGTTACAGGCCTCTGTATTTATGATCTGATTTTTCTTGTTCTTCTGGCACTCCGCTTCTAAAAACCTTGATCCTTTTGTCTCCTTGGTTTCTATTTTGTCATAACTATGAATTTCTCCTTTTCAAAAACAAAATGCACGTTTCATTTTTCCCTAAATGCTTTGAGGTAGTGGAATGTGTCCCCACCCCCCAGATGTTCATGTTATACTGCCTCTATAGGAATAGAGGTGGAGATAGGGTGAAAGTCTAGAAATTTTTGCATATAGGATGCCTGACAATTTGAGCAATTATCTGTAGCTTTGCTCATGTTTTAACTCTGTCATCATTCTCTTCTCAGCTGTGCGACATAAAGAGACAGTGCTGATAATAGTCTTTTTTTGCAGAGTGTATCATCACATCTTTCATTGGGCGGTGAAGTATTTTGGGCTGGTCAGCATAGGAAGTCCGGTATTGGTTATGCTGCAAGATACAACACAGATAAGATGGTATAGTAACTGTCATCATCAGTTGACTTATTTAATTTTCTACCTTCTATTACCATGGAAAATGAAGTTTCTAGGTTGGCTTCACTTTATATTAACTTAATTTCCATGCACATATGTAGATAACTAAAATTGTGAAGTTAACATAAGCTTTAAGTTTATGATATTATATTGTATTTGTTTAGTGTTGTTTGATGAATTTCTTATTTTAATCAGTTATCATTCATTAAATAAAGTCTTATAAAGTTTTAATAAGTTGTTTATGATATATACTGTGTGCACATAAATTCTTGAACTTTTCATGGAAATAACTTCATAATGGCAGACTAGCTCAAATAGTTTGACATTATTTTCTCGCTTTGTAGGTCATAGGTTTGATTCTCTATGTAAAATATTATTAGAATAGCATAGCTGATTATAATGTTGAAATATATATCGTGTTTCCAAAAATCATAATCCACCATCTCCCTTGAGATATCATAGAAGATCTTGGATTTCTCTGTTCTTAGTGAATTTATGCAAGAAAAGTTGTGCCACTCTAATAATATCTTGTTTCTTTTCTAAAAAATAATTGTACTAGTTGATTGTGGCCAGATTCTGTGGAAATTTCTTGGGTCAATGAAAATTTTAATCCGAGGAAGAATAAGAGTTTGACCTTGATGATCCATCGTCATGTTCAATTTTTCAATCTGCAGGTTGCCACTGGACAAATTGCCAGCACGGGTATGGTGGCTCTGAGCTACGTTCAAAAAGTGTCTGAGAAGGTAAGTAAATTGTGTCAGCGCATTTCTGCTGTCTTGAAACAATAAACATTTGATTAATAACCAAATAACACATAACAAAGGGCAAAATAACCTCCTAGCAAGCCAACACTGCACAATGAAGAGAATGGTAAAAGAGGCAGAACCATCAAACTTTGTAATTTATTTTTCATTATATCTTATATCATTTTTTATTCCTTATTTTAGGTTTCATTGGCATCTGATTTCACGTATAACTACATGTCAAGAGATGTAATATCCAGTCTTGGCTATGACTACATTCTTCGACAGGTAGCTTCTGTTTTGTGAATGTTCTATAACGCCAAATATATGTTATCAACAATCCATTCCTATACTACTGTTTAATTTTTCAAGGAGAACATGATTGGAGGGATTGAAGATTTTGTGTGGTAATCAGAAGGTTTATTTACACTTGGCTGCTATATAGTATTGTTGTGAGGATGATATAATGGTTGAAAATATGTAGAGCTAATCTAGAGAGAAATGGAATGGAGAGTGTGGTTAAAAAATGGCGATGTAAACTAAAAATGTTGCTTCTGGGGTAATCCTAGAAGAGCTGATTTTTGGCAACAAGCCCTAATACTATTCACCAATCTTGCTTTAAACCCTTAATGCTCAAGAATATGACAGAGTGAGCTAGGAAAATGGAGAAATTTTTGTCTAATCGATGGGGGGTCATTTTACTGCAGACTAGTCTGATGGTCATTTTACTGTAAACCCTTGTTGCTCCAGTTTTATCGACTATCATATTACTGAAGATGGGTAAATGTTGTGGTTGTTACAGTGCCGTCTTAGAGGGAAGATTGATTCCAATGGCTGTGTAGCTGCTTTCCTTGAAGAGCGACTAAATATGGGTGTTAATTTCATTCTTTCCGCAGAGGTACCTATAAGTTGCATAGTTATTATTTTTATTTTATTTTATTTTTTATTTTTTGCCTCTTAACAAAACATCAAGAATTTCTTCAAGACTTTTACCCAATGCTTTGCTTATTTCTTGACAATTTATTACATTTGTTAAAAACACTTTTTGAGTTTCTAGTTAAATTTCAAAAGCTTCCCCCTCAATTTTGAAGTTCTGGTTTGAATTTTAGAAACATTCTATGGAATTAGATGTAACAGAACTAAAAATTCACGAGGGAAACAAGTCGCTTTTTTAGAAACAGGAAACTGAAAAACAGAAGGTGACTAACGACTATCAAGCAGGCAGGCACCTTTTAACTTATATTGTTCACATGGCTGAATCGGTTCTTAACTGTGAAATGTAATGCAGATTGATCACAGGAAGAAAGACTACAAATTTGGATTTGGTTTGACAGTAGGAGAATAGATTGGCAAGAGTGAGCAAGTCGTTATCGTGTCCCCAATGCTGTGGTAGAAACATAGTGGAATTCTTTCCTTGCATGATTTTTCCTGGTGTTGAATTCTCAGTTCCCTTAGTTAATTGTTGTTCAGCACATTATTTTGAGCAGAATCTAACTGCTGTTGCAGTTTCTAGAGGCCATATCTGTCTCCCCATATCAAAATTTTCTTTATCAATTAATAATTTTGTTATTCACCCGAGGGCTAGACAAAGAGATGACACTGTCGACTTCGAAATCTTATGCAGCTTTCGACTTGTTTATCGTTTCATTTTTGGTTGGTTTTTAACCTTATTGATACATATACAAGAGCTGCTAATCTTGCCTTTGCTCATTTTGATGTTTGTGGAAATTGATATGTAAGAAATATCATGCTGTGATCGAGTGGATATATAAAAAGGGAAGAAATAGTTTCATCCCTTCCCTTTGCTTTATGATAGAAAGTTCTTCAAAGAAGTGTCCTTGTTCGTTGATTTTTCTTTTATTTATAGAAATACTAC

mRNA sequence

TTTCGACCTGGTCCTAGGGTTTTAGAGCATCTACATCCTCTCCGGGGTTTAGAGAGAGAAAGACCTACCTCTCTCCCGCTCTCTTGATCGCTACATTTCTCTGATTTTCAGAAATCTACGTTGCCTCAATCAATCTCCACTCACAATTGTTTTCGACGTGCCATTACCGTTCTAAATTCTTCCACTGTCGTGTTGCTTGGTTCATTTCCGTTTCCTGTAGGTGATAATATACAATGGCTGGCCTTGTCCCTCCGACCACCGCTGCGGCTGCTGCTACGGCGACCGCCCTGCCTGTTCCACCGAAGAAGACAGAGGACGAGAAAGTGGATTACCTGAATCTCCCATGTCCTATCCCCTACGAGGAGATTCACCGTGAAGCTTTCATGTCTTTGAAGCCGGAGCTGTTTGAAGGAATGCGATTTGATTTCACCAAAGGACTCAATCAAAAGTTCTCCCTCAGCCACAGCGTGTCTATGGGACCAATGGAGATTCCTGCTCAATCCGCTGAGACCATCAAAATCCCTACTGCCAACTACGAGTTTGGTGCTAACTTTATAGACCCGAAGTTGATGCTTTTTGGGAGGATACTCACCGATGGAAGGCTCAATGCAAGAGTGAAGTGCGATTTATCTGACAATCTCACTTTGAAGGCCAATGCACAGCTGACAAATGAGCCACATATGTCACATGGGATGGTCAACTTCGATTATAAGGGCAGAGACTTCAGAACCCAGTTTCAATTAGGCAACGGTGCCTTATTTGGAGCAAGCTACATTCAGAGTGTATCATCACATCTTTCATTGGGCGGTGAAGTATTTTGGGCTGGTCAGCATAGGAAGTCCGGTATTGGTTATGCTGCAAGATACAACACAGATAAGATGGTTGCCACTGGACAAATTGCCAGCACGGGTATGGTGGCTCTGAGCTACGTTCAAAAAGTGTCTGAGAAGGTTTCATTGGCATCTGATTTCACGTATAACTACATGTCAAGAGATGTAATATCCAGTCTTGGCTATGACTACATTCTTCGACAGTGCCGTCTTAGAGGGAAGATTGATTCCAATGGCTGTGTAGCTGCTTTCCTTGAAGAGCGACTAAATATGGGTGTTAATTTCATTCTTTCCGCAGAGATTGATCACAGGAAGAAAGACTACAAATTTGGATTTGGTTTGACAGTAGGAGAATAGATTGGCAAGAGTGAGCAAGTCGTTATCGTGTCCCCAATGCTGTGGTAGAAACATAGTGGAATTCTTTCCTTGCATGATTTTTCCTGGTGTTGAATTCTCAGTTCCCTTAGTTAATTGTTGTTCAGCACATTATTTTGAGCAGAATCTAACTGCTGTTGCAGTTTCTAGAGGCCATATCTGTCTCCCCATATCAAAATTTTCTTTATCAATTAATAATTTTGTTATTCACCCGAGGGCTAGACAAAGAGATGACACTGTCGACTTCGAAATCTTATGCAGCTTTCGACTTGTTTATCGTTTCATTTTTGGTTGGTTTTTAACCTTATTGATACATATACAAGAGCTGCTAATCTTGCCTTTGCTCATTTTGATGTTTGTGGAAATTGATATGTAAGAAATATCATGCTGTGATCGAGTGGATATATAAAAAGGGAAGAAATAGTTTCATCCCTTCCCTTTGCTTTATGATAGAAAGTTCTTCAAAGAAGTGTCCTTGTTCGTTGATTTTTCTTTTATTTATAGAAATACTAC

Coding sequence (CDS)

ATGGCTGGCCTTGTCCCTCCGACCACCGCTGCGGCTGCTGCTACGGCGACCGCCCTGCCTGTTCCACCGAAGAAGACAGAGGACGAGAAAGTGGATTACCTGAATCTCCCATGTCCTATCCCCTACGAGGAGATTCACCGTGAAGCTTTCATGTCTTTGAAGCCGGAGCTGTTTGAAGGAATGCGATTTGATTTCACCAAAGGACTCAATCAAAAGTTCTCCCTCAGCCACAGCGTGTCTATGGGACCAATGGAGATTCCTGCTCAATCCGCTGAGACCATCAAAATCCCTACTGCCAACTACGAGTTTGGTGCTAACTTTATAGACCCGAAGTTGATGCTTTTTGGGAGGATACTCACCGATGGAAGGCTCAATGCAAGAGTGAAGTGCGATTTATCTGACAATCTCACTTTGAAGGCCAATGCACAGCTGACAAATGAGCCACATATGTCACATGGGATGGTCAACTTCGATTATAAGGGCAGAGACTTCAGAACCCAGTTTCAATTAGGCAACGGTGCCTTATTTGGAGCAAGCTACATTCAGAGTGTATCATCACATCTTTCATTGGGCGGTGAAGTATTTTGGGCTGGTCAGCATAGGAAGTCCGGTATTGGTTATGCTGCAAGATACAACACAGATAAGATGGTTGCCACTGGACAAATTGCCAGCACGGGTATGGTGGCTCTGAGCTACGTTCAAAAAGTGTCTGAGAAGGTTTCATTGGCATCTGATTTCACGTATAACTACATGTCAAGAGATGTAATATCCAGTCTTGGCTATGACTACATTCTTCGACAGTGCCGTCTTAGAGGGAAGATTGATTCCAATGGCTGTGTAGCTGCTTTCCTTGAAGAGCGACTAAATATGGGTGTTAATTTCATTCTTTCCGCAGAGATTGATCACAGGAAGAAAGACTACAAATTTGGATTTGGTTTGACAGTAGGAGAATAG

Protein sequence

MAGLVPPTTAAAAATATALPVPPKKTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEGMRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIKIPTANYEFGANFIDPKLMLFGRILTDGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASYIQSVSSHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQIASTGMVALSYVQKVSEKVSLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEIDHRKKDYKFGFGLTVGE

Homology

[Close]

BLAST of Carg15494 vs. NCBI nr
Match: XP_023540810.1 (mitochondrial import receptor subunit TOM40-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 602.8 bits (1553), Expect = 6.6e-169
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0


Query: 1   MAGLVPPTTXXXXXXXXXXXXXXXXTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG 60
           MAGLVPPTTXXXXXXXXXXXXXXXXTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG
Sbjct: 1   MAGLVPPTTXXXXXXXXXXXXXXXXTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG 60

Query: 61  MRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIKIPTANYEFGANFIDPKLMLFGRILT 120
           MRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIKIPTANYEFGANFIDPKLMLFGRILT
Sbjct: 61  MRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIKIPTANYEFGANFIDPKLMLFGRILT 120

Query: 121 DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY 180
           DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY
Sbjct: 121 DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY 180

Query: 181 IQSVSSHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQIASTGMVALSYVQKVSEKV 240
           IQSVSSHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQIASTGMVALSYVQKVSEKV
Sbjct: 181 IQSVSSHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQIASTGMVALSYVQKVSEKV 240

Query: 241 SLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI 300
           SLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI
Sbjct: 241 SLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI 300

Query: 301 DHRKKDYKFGFGLTVGE 318
           DHRKKDYKFGFGLTVGE
Sbjct: 301 DHRKKDYKFGFGLTVGE 317

[Close]

BLAST of Carg15494 vs. NCBI nr
Match: XP_022932584.1 (mitochondrial import receptor subunit TOM40-1-like [Cucurbita moschata])

HSP 1 Score: 601.3 bits (1549), Expect = 1.9e-168
Identity = 316/317 (99.68%), Postives = 317/317 (100.00%), Query Frame = 0


Query: 1   MAGLVPPTTXXXXXXXXXXXXXXXXTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG 60
           MAGLVPPTTXXXXXXXXXXXXXXXXTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG
Sbjct: 1   MAGLVPPTTXXXXXXXXXXXXXXXXTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG 60

Query: 61  MRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIKIPTANYEFGANFIDPKLMLFGRILT 120
           MRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIKIPTANYEFGANFIDPKLMLFGRILT
Sbjct: 61  MRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIKIPTANYEFGANFIDPKLMLFGRILT 120

Query: 121 DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY 180
           DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY
Sbjct: 121 DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY 180

Query: 181 IQSVSSHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQIASTGMVALSYVQKVSEKV 240
           IQSVSSHLSLGGEVFWAGQHRKSGIGYAARYNT+KMVATGQIASTGMVALSYVQKVSEKV
Sbjct: 181 IQSVSSHLSLGGEVFWAGQHRKSGIGYAARYNTEKMVATGQIASTGMVALSYVQKVSEKV 240

Query: 241 SLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI 300
           SLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI
Sbjct: 241 SLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI 300

Query: 301 DHRKKDYKFGFGLTVGE 318
           DHRKKDYKFGFGLTVGE
Sbjct: 301 DHRKKDYKFGFGLTVGE 317

[Close]

BLAST of Carg15494 vs. NCBI nr
Match: XP_022972232.1 (mitochondrial import receptor subunit TOM40-1-like [Cucurbita maxima])

HSP 1 Score: 599.0 bits (1543), Expect = 9.5e-168
Identity = 314/317 (99.05%), Postives = 314/317 (99.05%), Query Frame = 0


Query: 1   MAGLVPPTTXXXXXXXXXXXXXXXXTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG 60
           MAGL PPTT XXXXXXXXXXXXXXX EDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG
Sbjct: 1   MAGLAPPTTAXXXXXXXXXXXXXXXXEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG 60

Query: 61  MRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIKIPTANYEFGANFIDPKLMLFGRILT 120
           MRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIKIPTANYEFGANFIDPKLMLFGRILT
Sbjct: 61  MRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIKIPTANYEFGANFIDPKLMLFGRILT 120

Query: 121 DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY 180
           DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY
Sbjct: 121 DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY 180

Query: 181 IQSVSSHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQIASTGMVALSYVQKVSEKV 240
           IQSVSSHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQIASTGMVALSYVQKVSEKV
Sbjct: 181 IQSVSSHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQIASTGMVALSYVQKVSEKV 240

Query: 241 SLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI 300
           SLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI
Sbjct: 241 SLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI 300

Query: 301 DHRKKDYKFGFGLTVGE 318
           DHRKKDYKFGFGLTVGE
Sbjct: 301 DHRKKDYKFGFGLTVGE 317

[Close]

BLAST of Carg15494 vs. NCBI nr
Match: XP_022138139.1 (mitochondrial import receptor subunit TOM40-1-like [Momordica charantia])

HSP 1 Score: 586.3 bits (1510), Expect = 6.4e-164
Identity = 299/317 (94.32%), Postives = 304/317 (95.90%), Query Frame = 0


Query: 1   MAGLVPPTTXXXXXXXXXXXXXXXXTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG 60
           MAGLVPPTT XXXXXXXX        ++EKVDYLNLPCPIPYEEIHREAFMSLKPELFEG
Sbjct: 1   MAGLVPPTTAXXXXXXXXQYVPPKKIQEEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG 60

Query: 61  MRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIKIPTANYEFGANFIDPKLMLFGRILT 120
           MRFDFTKGLNQKFSLSHSV MGPMEIP+QS+ETIKIPTA YEFGANFIDPKLMLFGRILT
Sbjct: 61  MRFDFTKGLNQKFSLSHSVFMGPMEIPSQSSETIKIPTATYEFGANFIDPKLMLFGRILT 120

Query: 121 DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY 180
           DGRLNARVKCDLSDNL LKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY
Sbjct: 121 DGRLNARVKCDLSDNLILKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY 180

Query: 181 IQSVSSHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQIASTGMVALSYVQKVSEKV 240
           IQSVS HLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQ+ASTGMVALSYVQKVSEKV
Sbjct: 181 IQSVSPHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQVASTGMVALSYVQKVSEKV 240

Query: 241 SLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI 300
           SLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI
Sbjct: 241 SLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI 300

Query: 301 DHRKKDYKFGFGLTVGE 318
           DHRKKDYKFGFGLTVGE
Sbjct: 301 DHRKKDYKFGFGLTVGE 317

[Close]

BLAST of Carg15494 vs. NCBI nr
Match: XP_022955605.1 (mitochondrial import receptor subunit TOM40-1-like [Cucurbita moschata] >XP_023526583.1 mitochondrial import receptor subunit TOM40-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 585.1 bits (1507), Expect = 1.4e-163
Identity = 305/317 (96.21%), Postives = 312/317 (98.42%), Query Frame = 0


Query: 1   MAGLVPPTTXXXXXXXXXXXXXXXXTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG 60
           MAGL PPTTXXXXXXXXXXXXXXXXTEDEKVDYL+LPCPIPYEEIHREAFMSLKPELFEG
Sbjct: 1   MAGLAPPTTXXXXXXXXXXXXXXXXTEDEKVDYLDLPCPIPYEEIHREAFMSLKPELFEG 60

Query: 61  MRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIKIPTANYEFGANFIDPKLMLFGRILT 120
           MRFDFTKGLNQKFSLSHSVSMGP+EIP+QS ETIKIPTA YEFGAN+IDPKLMLFGRILT
Sbjct: 61  MRFDFTKGLNQKFSLSHSVSMGPIEIPSQSTETIKIPTATYEFGANYIDPKLMLFGRILT 120

Query: 121 DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY 180
           DGRLNARVKCDLSDNLTLK NAQLTNEPHMSHGMVNFDYKGRDFR+QFQLGNGALFGASY
Sbjct: 121 DGRLNARVKCDLSDNLTLKGNAQLTNEPHMSHGMVNFDYKGRDFRSQFQLGNGALFGASY 180

Query: 181 IQSVSSHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQIASTGMVALSYVQKVSEKV 240
           IQSVS HLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQ+ASTGMVALSYVQKVSEKV
Sbjct: 181 IQSVSPHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQVASTGMVALSYVQKVSEKV 240

Query: 241 SLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI 300
           SLA+DFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI
Sbjct: 241 SLATDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI 300

Query: 301 DHRKKDYKFGFGLTVGE 318
           DHRKKDYKFGFGLTVGE
Sbjct: 301 DHRKKDYKFGFGLTVGE 317

[Close]

BLAST of Carg15494 vs. TAIR10
Match: AT3G20000.1 (translocase of the outer mitochondrial membrane 40)

HSP 1 Score: 449.9 bits (1156), Expect = 1.3e-126
Identity = 220/317 (69.40%), Postives = 258/317 (81.39%), Query Frame = 0


Query: 1   MAGLVPPTTXXXXXXXXXXXXXXXXTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG 60
           MA L+PP T                  DEKVDY NLP P+PYEE+HREA MSLK + FEG
Sbjct: 1   MADLLPPLTAAQVDAKTKV--------DEKVDYSNLPSPVPYEELHREALMSLKSDNFEG 60

Query: 61  MRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAE-TIKIPTANYEFGANFIDPKLMLFGRIL 120
           +RFDFT+ LNQKFSLSHSV MGP E+PAQS E TIKIPTA+YEFGAN+ DPKL+L GR++
Sbjct: 61  LRFDFTRALNQKFSLSHSVMMGPTEVPAQSPETTIKIPTAHYEFGANYYDPKLLLIGRVM 120

Query: 121 TDGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGAS 180
           TDGRLNAR+K DL+D L +KANA +TNE HMS  M NFDY G D+R Q QLG  AL GA+
Sbjct: 121 TDGRLNARLKADLTDKLVVKANALITNEEHMSQAMFNFDYMGSDYRAQLQLGQSALIGAT 180

Query: 181 YIQSVSSHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQIASTGMVALSYVQKVSEK 240
           YIQSV++HLSLGGE+FWAG  RKSGIGYAARY TDKMVA+GQ+ASTG V ++YVQK+S+K
Sbjct: 181 YIQSVTNHLSLGGEIFWAGVPRKSGIGYAARYETDKMVASGQVASTGAVVMNYVQKISDK 240

Query: 241 VSLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAE 300
           VSLA+DF YNY SRDV +S+GYDY+LRQ R+RGKIDSNG  +A LEERL+MG+NF+LSAE
Sbjct: 241 VSLATDFMYNYFSRDVTASVGYDYMLRQARVRGKIDSNGVASALLEERLSMGLNFLLSAE 300

Query: 301 IDHRKKDYKFGFGLTVG 317
           +DH+KKDYKFGFGLTVG
Sbjct: 301 LDHKKKDYKFGFGLTVG 309

[Close]

BLAST of Carg15494 vs. TAIR10
Match: AT1G50400.1 (Eukaryotic porin family protein)

HSP 1 Score: 400.2 bits (1027), Expect = 1.2e-111
Identity = 194/288 (67.36%), Postives = 232/288 (80.56%), Query Frame = 0


Query: 28  DEKVDYLNLPCPIPYEEIHREAFMSLKPELFEGMRFDFTKGLNQKFSLSHSVSMGPMEI- 87
           DEKVDY NLPCP+ YEE++REA M+LKPELFEG R D+ K LNQKF LSHS+ MGP E+ 
Sbjct: 20  DEKVDYSNLPCPVLYEELNREATMALKPELFEGFRLDYNKSLNQKFFLSHSILMGPTEVP 79

Query: 88  -PAQSAETIKIPTANYEFGANFIDPKLMLFGRILTDGRLNARVKCDLSDNLTLKANAQLT 147
            P  S+E IKIPTANY+FGA FIDPKL L GRI TDGRLNAR K DL+DN ++KANA LT
Sbjct: 80  NPTPSSEIIKIPTANYDFGAGFIDPKLYLIGRITTDGRLNARAKFDLTDNFSVKANALLT 139

Query: 148 NEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASYIQSVSSHLSLGGEVFWAGQHRKSGI 207
           +E   S G +  DYKG D+RTQ QLGN +++ A+YIQ V+ HLSLGGE FW GQ   SG+
Sbjct: 140 DEEDKSQGHLVIDYKGSDYRTQLQLGNNSVYAANYIQHVTPHLSLGGEAFWLGQQLMSGV 199

Query: 208 GYAARYNTDKMVATGQIASTGMVALSYVQKVSEKVSLASDFTYNYMSRDVISSLGYDYIL 267
           GYAARY TDK VA+GQIASTG+  ++YV KVSEK+S A+DF YNY+SRDV +S+GYD I 
Sbjct: 200 GYAARYETDKTVASGQIASTGVAVMNYVHKVSEKLSFATDFIYNYLSRDVTASVGYDLIT 259

Query: 268 RQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEIDHRKKDYKFGFGL 314
           RQ RLRGK+DSNG VAA+LEE+L +G+ F+LSAE+DH KKDYKFGFG+
Sbjct: 260 RQSRLRGKVDSNGVVAAYLEEQLPIGLRFLLSAEVDHVKKDYKFGFGV 307

[Close]

BLAST of Carg15494 vs. Swiss-Prot
Match: sp|Q9LHE5|TO401_ARATH (Mitochondrial import receptor subunit TOM40-1 OS=Arabidopsis thaliana OX=3702 GN=TOM40-1 PE=1 SV=3)

HSP 1 Score: 449.9 bits (1156), Expect = 2.3e-125
Identity = 220/317 (69.40%), Postives = 258/317 (81.39%), Query Frame = 0


Query: 1   MAGLVPPTTXXXXXXXXXXXXXXXXTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG 60
           MA L+PP T                  DEKVDY NLP P+PYEE+HREA MSLK + FEG
Sbjct: 1   MADLLPPLTAAQVDAKTKV--------DEKVDYSNLPSPVPYEELHREALMSLKSDNFEG 60

Query: 61  MRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAE-TIKIPTANYEFGANFIDPKLMLFGRIL 120
           +RFDFT+ LNQKFSLSHSV MGP E+PAQS E TIKIPTA+YEFGAN+ DPKL+L GR++
Sbjct: 61  LRFDFTRALNQKFSLSHSVMMGPTEVPAQSPETTIKIPTAHYEFGANYYDPKLLLIGRVM 120

Query: 121 TDGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGAS 180
           TDGRLNAR+K DL+D L +KANA +TNE HMS  M NFDY G D+R Q QLG  AL GA+
Sbjct: 121 TDGRLNARLKADLTDKLVVKANALITNEEHMSQAMFNFDYMGSDYRAQLQLGQSALIGAT 180

Query: 181 YIQSVSSHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQIASTGMVALSYVQKVSEK 240
           YIQSV++HLSLGGE+FWAG  RKSGIGYAARY TDKMVA+GQ+ASTG V ++YVQK+S+K
Sbjct: 181 YIQSVTNHLSLGGEIFWAGVPRKSGIGYAARYETDKMVASGQVASTGAVVMNYVQKISDK 240

Query: 241 VSLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAE 300
           VSLA+DF YNY SRDV +S+GYDY+LRQ R+RGKIDSNG  +A LEERL+MG+NF+LSAE
Sbjct: 241 VSLATDFMYNYFSRDVTASVGYDYMLRQARVRGKIDSNGVASALLEERLSMGLNFLLSAE 300

Query: 301 IDHRKKDYKFGFGLTVG 317
           +DH+KKDYKFGFGLTVG
Sbjct: 301 LDHKKKDYKFGFGLTVG 309

[Close]

BLAST of Carg15494 vs. Swiss-Prot
Match: sp|Q9SX55|TO402_ARATH (Probable mitochondrial import receptor subunit TOM40-2 OS=Arabidopsis thaliana OX=3702 GN=TOM40-2 PE=1 SV=3)

HSP 1 Score: 400.2 bits (1027), Expect = 2.1e-110
Identity = 194/288 (67.36%), Postives = 232/288 (80.56%), Query Frame = 0


Query: 28  DEKVDYLNLPCPIPYEEIHREAFMSLKPELFEGMRFDFTKGLNQKFSLSHSVSMGPMEI- 87
           DEKVDY NLPCP+ YEE++REA M+LKPELFEG R D+ K LNQKF LSHS+ MGP E+ 
Sbjct: 20  DEKVDYSNLPCPVLYEELNREATMALKPELFEGFRLDYNKSLNQKFFLSHSILMGPTEVP 79

Query: 88  -PAQSAETIKIPTANYEFGANFIDPKLMLFGRILTDGRLNARVKCDLSDNLTLKANAQLT 147
            P  S+E IKIPTANY+FGA FIDPKL L GRI TDGRLNAR K DL+DN ++KANA LT
Sbjct: 80  NPTPSSEIIKIPTANYDFGAGFIDPKLYLIGRITTDGRLNARAKFDLTDNFSVKANALLT 139

Query: 148 NEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASYIQSVSSHLSLGGEVFWAGQHRKSGI 207
           +E   S G +  DYKG D+RTQ QLGN +++ A+YIQ V+ HLSLGGE FW GQ   SG+
Sbjct: 140 DEEDKSQGHLVIDYKGSDYRTQLQLGNNSVYAANYIQHVTPHLSLGGEAFWLGQQLMSGV 199

Query: 208 GYAARYNTDKMVATGQIASTGMVALSYVQKVSEKVSLASDFTYNYMSRDVISSLGYDYIL 267
           GYAARY TDK VA+GQIASTG+  ++YV KVSEK+S A+DF YNY+SRDV +S+GYD I 
Sbjct: 200 GYAARYETDKTVASGQIASTGVAVMNYVHKVSEKLSFATDFIYNYLSRDVTASVGYDLIT 259

Query: 268 RQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEIDHRKKDYKFGFGL 314
           RQ RLRGK+DSNG VAA+LEE+L +G+ F+LSAE+DH KKDYKFGFG+
Sbjct: 260 RQSRLRGKVDSNGVVAAYLEEQLPIGLRFLLSAEVDHVKKDYKFGFGV 307

[Close]

BLAST of Carg15494 vs. Swiss-Prot
Match: sp|Q9QYA2|TOM40_MOUSE (Mitochondrial import receptor subunit TOM40 homolog OS=Mus musculus OX=10090 GN=Tomm40 PE=1 SV=3)

HSP 1 Score: 122.5 bits (306), Expect = 8.6e-27
Identity = 92/303 (30.36%), Postives = 148/303 (48.84%), Query Frame = 0


Query: 36  LPCPIPYEEIHREAFMSLKPELFEGMRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIK 95
           LP P  +EE HR+    L P   EG++    KGL+ +F ++H+V++G             
Sbjct: 77  LPNPGTFEECHRKC-KELFPVQMEGVKLTVNKGLSNRFQVTHTVALG------------T 136

Query: 96  IPTANYEFGANFIDPKLM--------LFGRILTDGRLNARVKCDLSDNLTLKANAQLTNE 155
           I  +NY FG  ++  K +        L G +   G LNA+V   LS  L  K   Q T +
Sbjct: 137 IGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLSPGLRSKMAIQ-TQQ 196

Query: 156 PHMSHGMVNFDYKGRDFRTQFQLGN------GALFGASYIQSVSSHLSLGGEVFWAGQHR 215
               +  V+ +Y+G DF     LGN        +  A Y+QS++  L+LGGE+ +   HR
Sbjct: 197 SKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVY---HR 256

Query: 216 KSG-----IGYAARYNTDKMVATGQIASTGMVALSYVQKVSEKVSLASDFTYNYMSRDVI 275
           + G     +  A +Y  +  +AT  +   GM A +Y  K S+++ +  +F  +   +D  
Sbjct: 257 RPGEEGTVMSLAGKYTLNNWLATVTLGQAGMHA-TYYHKASDQLQVGVEFEASTRMQDTS 316

Query: 276 SSLGYDYILRQCR--LRGKIDSNGCVAAFLEERL-NMGVNFILSAEIDHRKKDYKFGFGL 317
           +S GY   L +     +G ++SN  V A LE++L  + +   L A ++HRK  +  GFGL
Sbjct: 317 ASFGYQLDLPKANFLFKGSVNSNWIVGATLEKKLPPLPLTLSLCAFLNHRKNKFLCGFGL 361

[Close]

BLAST of Carg15494 vs. Swiss-Prot
Match: sp|Q75Q40|TOM40_RAT (Mitochondrial import receptor subunit TOM40 homolog OS=Rattus norvegicus OX=10116 GN=Tomm40 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.6e-27
Identity = 92/303 (30.36%), Postives = 148/303 (48.84%), Query Frame = 0


Query: 36  LPCPIPYEEIHREAFMSLKPELFEGMRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIK 95
           LP P  +EE HR+    L P   EG++    KGL+ +F ++H+V++G             
Sbjct: 77  LPNPGTFEECHRKC-KELFPVQMEGVKLTVNKGLSNRFQVTHTVALG------------T 136

Query: 96  IPTANYEFGANFIDPKLM--------LFGRILTDGRLNARVKCDLSDNLTLKANAQLTNE 155
           I  +NY FG  ++  K +        L G +   G LNA+V   LS  L  K   Q T +
Sbjct: 137 IGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLSPGLRSKMAIQ-TQQ 196

Query: 156 PHMSHGMVNFDYKGRDFRTQFQLGN------GALFGASYIQSVSSHLSLGGEVFWAGQHR 215
               +  V+ +Y+G DF     LGN        +  A Y+QS++  L+LGGE+ +   HR
Sbjct: 197 SKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVY---HR 256

Query: 216 KSG-----IGYAARYNTDKMVATGQIASTGMVALSYVQKVSEKVSLASDFTYNYMSRDVI 275
           + G     +  A +Y  +  +AT  +   GM A +Y  K S+++ +  +F  +   +D  
Sbjct: 257 RPGEKGTVMSLAGKYTLNNWLATVTLGQAGMHA-TYYHKASDQLQVGVEFEASTRMQDTS 316

Query: 276 SSLGYDYILRQCR--LRGKIDSNGCVAAFLEERL-NMGVNFILSAEIDHRKKDYKFGFGL 317
           +S GY   L +     +G ++SN  V A LE++L  + +   L A ++HRK  +  GFGL
Sbjct: 317 ASFGYQLDLPKANFLFKGSVNSNWIVGATLEKKLPPLPLTLSLCAFLNHRKNKFLCGFGL 361

[Close]

BLAST of Carg15494 vs. Swiss-Prot
Match: sp|Q1LZB5|TOM40_BOVIN (Mitochondrial import receptor subunit TOM40 homolog OS=Bos taurus OX=9913 GN=TOMM40 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.9e-26
Identity = 92/303 (30.36%), Postives = 146/303 (48.18%), Query Frame = 0


Query: 36  LPCPIPYEEIHREAFMSLKPELFEGMRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIK 95
           LP P  +EE HR+    L P   EG++    KGL+  F ++H+V++              
Sbjct: 77  LPNPGTFEECHRKC-KELFPIQMEGVKLTVNKGLSNHFQVNHTVALS------------T 136

Query: 96  IPTANYEFGANFIDPKLM--------LFGRILTDGRLNARVKCDLSDNLTLKANAQLTNE 155
           I  +NY FG  ++  K +        L G +   G LNA+V   L   L  K   Q T +
Sbjct: 137 IGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLGPGLRSKMAIQ-TQQ 196

Query: 156 PHMSHGMVNFDYKGRDFRTQFQLGN------GALFGASYIQSVSSHLSLGGEVFWAGQHR 215
               +  V+ +Y+G DF     LGN        +  A Y+QS++  L+LGGE+ +   HR
Sbjct: 197 SKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVY---HR 256

Query: 216 KSG-----IGYAARYNTDKMVATGQIASTGMVALSYVQKVSEKVSLASDFTYNYMSRDVI 275
           + G     +  A +Y  +  +AT  +   GM A +Y  K S+++ +  +F  +   +D  
Sbjct: 257 RPGEEGAVMSLAGKYTLNNWLATVTLGQAGMHA-TYYHKASDQLQVGVEFEASTRMQDTS 316

Query: 276 SSLGYDYILRQCRL--RGKIDSNGCVAAFLEERL-NMGVNFILSAEIDHRKKDYKFGFGL 317
            S GY   L +  L  +G +DSN  V A LE++L  + +   L A ++HRK  ++ GFGL
Sbjct: 317 VSFGYQLDLPKANLLFKGSVDSNWIVGATLEKKLPPLPLTLALGAFLNHRKNKFQCGFGL 361

[Close]

BLAST of Carg15494 vs. TrEMBL
Match: tr|A0A1S3BWW8|A0A1S3BWW8_CUCME (mitochondrial import receptor subunit TOM40-1-like OS=Cucumis melo OX=3656 GN=LOC103494505 PE=4 SV=1)

HSP 1 Score: 582.8 bits (1501), Expect = 4.7e-163
Identity = 305/317 (96.21%), Postives = 307/317 (96.85%), Query Frame = 0


Query: 1   MAGLVPPTTXXXXXXXXXXXXXXXXTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG 60
           MAGL PPT   XXXXXXXXXXXXXXTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG
Sbjct: 1   MAGLAPPTAATXXXXXXXXXXXXXXTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG 60

Query: 61  MRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIKIPTANYEFGANFIDPKLMLFGRILT 120
           MRFDFTKGLNQKFSLSHSV MGP EIP QSAETIKIPTA YEFGANFIDPKLMLFGRILT
Sbjct: 61  MRFDFTKGLNQKFSLSHSVFMGPTEIPNQSAETIKIPTATYEFGANFIDPKLMLFGRILT 120

Query: 121 DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY 180
           DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY
Sbjct: 121 DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY 180

Query: 181 IQSVSSHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQIASTGMVALSYVQKVSEKV 240
           IQSVS HLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQ+ASTGMVALSYVQKVSEKV
Sbjct: 181 IQSVSPHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQVASTGMVALSYVQKVSEKV 240

Query: 241 SLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI 300
           SLA+DFTYNYMSRDVISSLGYDYILRQ RLRGKIDSNGCVAAFLEERLNMGVNFILSAEI
Sbjct: 241 SLATDFTYNYMSRDVISSLGYDYILRQSRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI 300

Query: 301 DHRKKDYKFGFGLTVGE 318
           DHRKKDYKFGFGLTVGE
Sbjct: 301 DHRKKDYKFGFGLTVGE 317

[Close]

BLAST of Carg15494 vs. TrEMBL
Match: tr|A0A0A0KW78|A0A0A0KW78_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017120 PE=4 SV=1)

HSP 1 Score: 582.8 bits (1501), Expect = 4.7e-163
Identity = 305/317 (96.21%), Postives = 307/317 (96.85%), Query Frame = 0


Query: 1   MAGLVPPTTXXXXXXXXXXXXXXXXTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG 60
           MAGL PPT  XXXXXXXXXXXXXX TEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG
Sbjct: 1   MAGLAPPTAAXXXXXXXXXXXXXXKTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG 60

Query: 61  MRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIKIPTANYEFGANFIDPKLMLFGRILT 120
           MRFDFTKGLNQKFSLSHSV MGP EIP QSAETIKIPTA YEFGANFIDPKLMLFGRILT
Sbjct: 61  MRFDFTKGLNQKFSLSHSVFMGPTEIPNQSAETIKIPTATYEFGANFIDPKLMLFGRILT 120

Query: 121 DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY 180
           DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY
Sbjct: 121 DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY 180

Query: 181 IQSVSSHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQIASTGMVALSYVQKVSEKV 240
           IQSVS HLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQ+ASTGMVALSYVQKVSEKV
Sbjct: 181 IQSVSPHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQVASTGMVALSYVQKVSEKV 240

Query: 241 SLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI 300
           SLA+DFTYNYMSRDVISSLGYDYILRQ RLRGKIDSNGCVAAFLEERLNMGVNFILSAEI
Sbjct: 241 SLATDFTYNYMSRDVISSLGYDYILRQSRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI 300

Query: 301 DHRKKDYKFGFGLTVGE 318
           DHRKKDYKFGFGLTVGE
Sbjct: 301 DHRKKDYKFGFGLTVGE 317

[Close]

BLAST of Carg15494 vs. TrEMBL
Match: tr|A0A2R6QJK7|A0A2R6QJK7_ACTCH (Mitochondrial import receptor subunit TOM40-1, N-terminally processed like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc16597 PE=4 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 4.4e-153
Identity = 271/317 (85.49%), Postives = 287/317 (90.54%), Query Frame = 0


Query: 1   MAGLVPPTTXXXXXXXXXXXXXXXXTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG 60
           MA LVPPT                  + EKVDYLNLPCPIPYEEIHREA MSLKPELFEG
Sbjct: 1   MATLVPPTA------AMPPASKPAVIQPEKVDYLNLPCPIPYEEIHREALMSLKPELFEG 60

Query: 61  MRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIKIPTANYEFGANFIDPKLMLFGRILT 120
           MRFDFTKGLNQ+FSLSHSV MGP EIP+QS+E IKIPTA+YEFGANFIDP+LMLFGRI+T
Sbjct: 61  MRFDFTKGLNQRFSLSHSVFMGPTEIPSQSSEAIKIPTAHYEFGANFIDPQLMLFGRIMT 120

Query: 121 DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY 180
           DGRLNARVKCDLS+NLTLKANAQLTNEPHMSHGMVNFDYKG D+R+QFQLGNGALFGASY
Sbjct: 121 DGRLNARVKCDLSENLTLKANAQLTNEPHMSHGMVNFDYKGTDYRSQFQLGNGALFGASY 180

Query: 181 IQSVSSHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQIASTGMVALSYVQKVSEKV 240
           IQSV+ HLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQ+ASTGMVALSYVQKVSEKV
Sbjct: 181 IQSVTPHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQVASTGMVALSYVQKVSEKV 240

Query: 241 SLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI 300
           SLASDF YNYMSRDV +S GYDYILRQCRLRGKIDSNGC +AFLEERLNMG+NFILSAE+
Sbjct: 241 SLASDFMYNYMSRDVTASFGYDYILRQCRLRGKIDSNGCTSAFLEERLNMGLNFILSAEV 300

Query: 301 DHRKKDYKFGFGLTVGE 318
           DHRKKDYKFGFGLTVGE
Sbjct: 301 DHRKKDYKFGFGLTVGE 311

[Close]

BLAST of Carg15494 vs. TrEMBL
Match: tr|A0A022RAW3|A0A022RAW3_ERYGU (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a010292mg PE=4 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 7.5e-153
Identity = 267/317 (84.23%), Postives = 283/317 (89.27%), Query Frame = 0


Query: 1   MAGLVPPTTXXXXXXXXXXXXXXXXTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG 60
           MA L+PP+                 TE  KVDYLNLPCPIPYEEIHREA MSLKPELFEG
Sbjct: 1   MATLIPPSPATATTHPAAGPTNPTATEQPKVDYLNLPCPIPYEEIHREALMSLKPELFEG 60

Query: 61  MRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIKIPTANYEFGANFIDPKLMLFGRILT 120
           +RFDFTKGLNQKFSLSHSV MGP E+P+QS ETIKIPTANYEFGANFIDPKLMLFGR++T
Sbjct: 61  LRFDFTKGLNQKFSLSHSVMMGPTEVPSQSTETIKIPTANYEFGANFIDPKLMLFGRVMT 120

Query: 121 DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY 180
           DGRLNAR+KCDL++NLTLK NAQLTNEPHMSHGM NFDYKG D+RTQFQLGNGALFGASY
Sbjct: 121 DGRLNARLKCDLTENLTLKGNAQLTNEPHMSHGMFNFDYKGSDYRTQFQLGNGALFGASY 180

Query: 181 IQSVSSHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQIASTGMVALSYVQKVSEKV 240
           IQSVS HLSLGGEVFWAGQHRKSGIGYAARYNTDKMV TGQ+ASTGMVALSYVQKVSEKV
Sbjct: 181 IQSVSPHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVTTGQVASTGMVALSYVQKVSEKV 240

Query: 241 SLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI 300
           SLASDF YNYMSRDV +S GYDYILRQCRLRGKIDSNG VAAFLEER NMG+NF+LSAEI
Sbjct: 241 SLASDFMYNYMSRDVTASFGYDYILRQCRLRGKIDSNGVVAAFLEERFNMGLNFLLSAEI 300

Query: 301 DHRKKDYKFGFGLTVGE 318
           DH+KKDYKFGFGLTVGE
Sbjct: 301 DHKKKDYKFGFGLTVGE 317

[Close]

BLAST of Carg15494 vs. TrEMBL
Match: tr|A0A1S4CG96|A0A1S4CG96_TOBAC (mitochondrial import receptor subunit TOM40-1-like OS=Nicotiana tabacum OX=4097 GN=LOC107818614 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 9.8e-153
Identity = 270/317 (85.17%), Postives = 286/317 (90.22%), Query Frame = 0


Query: 1   MAGLVPPTTXXXXXXXXXXXXXXXXTEDEKVDYLNLPCPIPYEEIHREAFMSLKPELFEG 60
           MA LVPPTT                 E EKVDY NLPCPIPYEEIHREA MSLKPELFEG
Sbjct: 1   MATLVPPTT-----TVPPACSKPAAVEPEKVDYSNLPCPIPYEEIHREALMSLKPELFEG 60

Query: 61  MRFDFTKGLNQKFSLSHSVSMGPMEIPAQSAETIKIPTANYEFGANFIDPKLMLFGRILT 120
           +RFDFTKGLNQ+FSLSHSV MGP E+P+QS ETIKIPTA+YEFGANFIDPKLMLFGR+LT
Sbjct: 61  LRFDFTKGLNQRFSLSHSVLMGPTELPSQSTETIKIPTAHYEFGANFIDPKLMLFGRVLT 120

Query: 121 DGRLNARVKCDLSDNLTLKANAQLTNEPHMSHGMVNFDYKGRDFRTQFQLGNGALFGASY 180
           DGR+NARVKCDLS+NLTLKAN QLT EPHMSHGMVNFDYKG+D R+QFQLGNGALFGASY
Sbjct: 121 DGRVNARVKCDLSENLTLKANGQLTGEPHMSHGMVNFDYKGKDHRSQFQLGNGALFGASY 180

Query: 181 IQSVSSHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQIASTGMVALSYVQKVSEKV 240
           IQSV+ HLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQ+ASTGMVALSYVQKVSEKV
Sbjct: 181 IQSVTPHLSLGGEVFWAGQHRKSGIGYAARYNTDKMVATGQVASTGMVALSYVQKVSEKV 240

Query: 241 SLASDFTYNYMSRDVISSLGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGVNFILSAEI 300
           SLASDF YNYMSRDV +S GYDYILRQCRLRGKIDSNGCVAAFLEERLNMG+NFILSAE+
Sbjct: 241 SLASDFMYNYMSRDVTASFGYDYILRQCRLRGKIDSNGCVAAFLEERLNMGLNFILSAEV 300

Query: 301 DHRKKDYKFGFGLTVGE 318
           DH+KKDYKFGFGLTVGE
Sbjct: 301 DHKKKDYKFGFGLTVGE 312

The following BLAST results are available for this feature:

BLAST of Carg15494 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540810.1	6.6e-169	100.00	mitochondrial import receptor subunit TOM40-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022932584.1	1.9e-168	99.68	mitochondrial import receptor subunit TOM40-1-like [Cucurbita moschata]	[more]
XP_022972232.1	9.5e-168	99.05	mitochondrial import receptor subunit TOM40-1-like [Cucurbita maxima]	[more]
XP_022138139.1	6.4e-164	94.32	mitochondrial import receptor subunit TOM40-1-like [Momordica charantia]	[more]
XP_022955605.1	1.4e-163	96.21	mitochondrial import receptor subunit TOM40-1-like [Cucurbita moschata] >XP_0235...	[more]

BLAST of Carg15494 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G20000.1	1.3e-126	69.40	translocase of the outer mitochondrial membrane 40	[more]
AT1G50400.1	1.2e-111	67.36	Eukaryotic porin family protein	[more]

BLAST of Carg15494 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LHE5\|TO401_ARATH	2.3e-125	69.40	Mitochondrial import receptor subunit TOM40-1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q9SX55\|TO402_ARATH	2.1e-110	67.36	Probable mitochondrial import receptor subunit TOM40-2 OS=Arabidopsis thaliana O...	[more]
sp\|Q9QYA2\|TOM40_MOUSE	8.6e-27	30.36	Mitochondrial import receptor subunit TOM40 homolog OS=Mus musculus OX=10090 GN=...	[more]
sp\|Q75Q40\|TOM40_RAT	8.6e-27	30.36	Mitochondrial import receptor subunit TOM40 homolog OS=Rattus norvegicus OX=1011...	[more]
sp\|Q1LZB5\|TOM40_BOVIN	1.9e-26	30.36	Mitochondrial import receptor subunit TOM40 homolog OS=Bos taurus OX=9913 GN=TOM...	[more]

BLAST of Carg15494 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BWW8\|A0A1S3BWW8_CUCME	4.7e-163	96.21	mitochondrial import receptor subunit TOM40-1-like OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A0A0KW78\|A0A0A0KW78_CUCSA	4.7e-163	96.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017120 PE=4 SV=1	[more]
tr\|A0A2R6QJK7\|A0A2R6QJK7_ACTCH	4.4e-153	85.49	Mitochondrial import receptor subunit TOM40-1, N-terminally processed like OS=Ac...	[more]
tr\|A0A022RAW3\|A0A022RAW3_ERYGU	7.5e-153	84.23	Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a010292mg PE...	[more]
tr\|A0A1S4CG96\|A0A1S4CG96_TOBAC	9.8e-153	85.17	mitochondrial import receptor subunit TOM40-1-like OS=Nicotiana tabacum OX=4097 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008320	protein transmembrane transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0030150	protein import into mitochondrial matrix
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0005741	mitochondrial outer membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR037930	Tom40
IPR023614	Porin_dom_sf
IPR027246	Porin_Euk/Tom40

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030150	protein import into mitochondrial matrix
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0005741	mitochondrial outer membrane
molecular_function	GO:0008320	protein transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15494-RA	Carg15494-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027246	Eukaryotic porin/Tom40	PFAM	PF01459	Porin_3	coord: 38..310 e-value: 3.5E-82 score: 275.8
IPR023614	Porin domain superfamily	GENE3D	G3DSA:2.40.160.10		coord: 207..316 e-value: 3.5E-13 score: 51.4
IPR037930	Tom40	PANTHER	PTHR10802	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40	coord: 13..316
IPR037930	Tom40	CDD	cd07305	Porin3_Tom40	coord: 36..316 e-value: 4.4867E-111 score: 325.703
None	No IPR available	PANTHER	PTHR10802:SF2	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40 HOMOLOG 1-RELATED	coord: 13..316

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15494	Cla010745	Watermelon (97103) v1	carwmB0691
Carg15494	Csa4G017120	Cucumber (Chinese Long) v2	carcuB0716
Carg15494	MELO3C017676	Melon (DHL92) v3.5.1	carmeB0694
Carg15494	ClCG07G016660	Watermelon (Charleston Gray)	carwcgB0671
Carg15494	CSPI04G03780	Wild cucumber (PI 183967)	carcpiB0730
Carg15494	Cucsa.094410	Cucumber (Gy14) v1	carcgyB0775
Carg15494	CmaCh06G016260	Cucurbita maxima (Rimu)	carcmaB0974
Carg15494	CmaCh14G015040	Cucurbita maxima (Rimu)	carcmaB0972
Carg15494	CmoCh06G016220	Cucurbita moschata (Rifu)	carcmoB0947
Carg15494	Cp4.1LG03g12450	Cucurbita pepo (Zucchini)	carcpeB0973
Carg15494	Cp4.1LG08g05700	Cucurbita pepo (Zucchini)	carcpeB0974
Carg15494	MELO3C017676.2	Melon (DHL92) v3.6.1	carmedB0707
Carg15494	CsaV3_4G003790	Cucumber (Chinese Long) v3	carcucB0733
Carg15494	Cla97C07G143660	Watermelon (97103) v2	carwmbB0723
Carg15494	Bhi01G002046	Wax gourd	carwgoB0816

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15494	Carg22446	Silver-seed gourd	carcarB231

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15494	Cucumber (Gy14) v2	carcgybB0693
Carg15494	Cucurbita moschata (Rifu)	carcmoB0946
Carg15494	Bottle gourd (USVL1VR-Ls)	carlsiB634