Carg15438 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15438
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Phage shock protein A, PspA
Location	Cucurbita_argyrosperma_scaffold_069 : 176862 .. 181388 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCAAATCGAGCTGGGATTGAATTATTGGAATTGGGCAGGCTTGGCCGGTTGATGAGGCTGAGGTGGAACACAAGCGATCCCCTGTTATCTTCAATCTATCTCAACTCAACACAATTTCACTATTCCGATTCTTTTCTGCAACATTTTTGCTTGGGTTCGATCATTCATGGCTGCCCAAACCCACGTTTTTACCGGATTAGCTTTGGCTTCAACTCCTTCTTCTTCATCTCAACCCTCTTCATCCAAGCCTTCCACCCTCTGTGTTGCCGCCAAGCCCTTGAGCACGTCCTTCCTTAATGGCGGAGGTACGTTTCCCTTGCTCTTAGCTTACCGTTCTCCATTTTGTTGATTTTAATGGCGGAGGTGTGATCCCCTGCTAAGTTTCATTTTATAATTGTTCCTTAGGGCATATTTTACTTGATTGGTACACATTCCTTTAGTGGGGTTCCCTCTTTTGGATGCCTACGCATACTTCCTTTCTTTTTTTCTAGAGTTAGGTTTCTTAAAAACCTGTAATATTTAGTGGAAATGCTGGCCAGCTTGACCGCTTTGTGTCCATCAATTTGAGATTGGGATTACCTCCTGGCGTGGGCTTCTTACAACATTAATCTAGGATCAATGAGCTGATTGGCTAACATGAGGCAACATTGTGCTATCTTATAATGAGTTAGGGGAACTTCTAGCTGGATATAGTTGATATAAGCAACTAATTTACTTAGAACTCAAATTAGAAGGCTTTTGATCACTTTAGAAACCAATTTCAAACCTCATGGTCCAACTAGAAATTGAACTCAATCCTCGGAGACCAAACAAAGCACTTAGAAACTTCAAGGATTAAGTAGAAATGGAAGTGTTAGTTTTGACAACCTAGGATCAAATAGAAACTAAGTTCAAATATCAGGAACCAAAAGTATATTCTACCTTAAAATATGAATCAAATTCCACTTAACTTTGTAATAGCTGTGTGCTTAATTACTCTAACAGGAAATCATAATTTTCCCTGCAGGGCACACCTTACAAATTACATGGATGAAGTCTTTACATTTTAATCGATCCCATGGTGGCAGACGTGGAGGTGCTCTTGGTGCTCACATGAACCTTTTTGATCGTTTTGCAAGGGTTGTTAAGGTAGTACTTTCAATTGTTTCATCAATTCGTTTAGTAATCTTTGGAATTCACGGATTTTGAGGATAACCATGACGCTTGCTTTCTCATGAGGTAGTCGTATGCTAATGCACTTATAAGTTCGTTTGAGGATCCGGAGAAAATTCTGGAGCAGACAGTGCTTGAAATGAATGATGACTTGACAAAGATGCGTCAAGCCACTGCACAGGTAAGTTTCAGAACCTTGTATTTATCATTTTTCTCTACTTGCGTTACCTTTGGCATTTCTCTTTGCTTCTTAGCCCGCAATGCTGTGTCTCCACTTTCAACTTTCCTTTATAAATTATTCATATTTCAAAGGGAATTAGAAGATGCATGTTATTAGGAAAATTGTACAAGGAAGCAAAATAATGAGGCATCTATTTCATTTTTTGACATGCATACTTAACCAATTAAAATTATGAAATGGACTTTTATTCTTGAAGGTACTAGCTTCTCAAAAGCGCTTGGAAAACAAGTATAAATCTGCACAGCAAGCTGCTGATGATTGGTAAAAATCTAGAACCATTCTCCATTTTCTTTGTGAAGTGATAGGTATACACCTTTCATTTCTAGTTTTAATATAGGTATCGAAAGGCGCAATTTGCTCTTCAAAAGGGAGACGATGATCTTGCTCGGGAAGCTTTAAAGAGGCGCAAATCATATGCTGTAAGTTAGAACAGATTCGTTGTCAGATCCGATTCCTATATTTCATGATAAATAGGAATGGTATTTATCAATTTGAAGAAACCTCTTAAATTCTTTTGTCCAATATGGAACTATTTCATGTTACTTTTTCTCCTATAGGTATGCTATTAGAAGCAATTTTAAGTTCGAAATTTTAATTCTGTTTGGCAAGATTTATGATTTATTCTGACCGATGATCACTGTGTTGTACCGTCAGGATAACGCAAATGCTTTGAAAGCTCAACTTGATCAGCAGAAGAATGTTGTGGAAAATCTTGTTTCTAATACTCGGGTATGAAGTTCTAATGTATTTTCCGTTGACCATCACATGAAACATTTTAAATTATATTTTGTTAAATTCTTTTAAGGATACAGCCCAGATTCCCTTGCATTACATTCGTTGGCCATGTAAAAATATTAACCGTAAGGGTAAACCAGTATGAGGAAATCCATCTTCTTGTTGGAGCTATGAAAGAATGCTGTAAAGAACAGTTAATGTTATCTCTGTAGTCTATAGATATTGAGAAAAATTAGTATTCTTCTTTCTTGTTGAGATAATGCTGATCCCTATTACATTCCTAGTGTAGCTAGAATTAGAAACTGGTAGAGACAAGTTTTCATATAATATATGCTCGAACATTAGTATGATTCTAACTTCAAGCTTTTAAAACAAGGATAATTAAGCCTATAGAATTCAATTTTACCATTGAATCTTTTCTTTGTAGCTTTTAGAGAGCAAGATACAAGAGGCGAGGTCAAAGAAAGACACACTGAAAGCGCGTGCTCAGTCTGCAAAGTTTGTGATTTAGTCAGATTGTTAAAAGTCTCTTTTTTCTCGAGTATCTTCCTTTATTGTTGATGATTGCTGATACCACCTTTCCATGGATTTAGGACTGCAACCAAAGTAAGTGAAATGTTGGGGAATGTTAACACAAGCAGTGCTCTTTCTGCTTTTGAGAAGATGGAGGAGAAAGGTAAGGAAGTGAAATATTTTAGTCAAGCATAGGCTTTCTTATCATCTAACATTACTTTATTTAAATATAGTTTCGTTGTAGTTTTTTCGTACTGTTGAGATTCTTGTCTATATGTTACTTATGGATAGATGATCTCCTTCTTGGCTTCTTCCTCGTTATGTTTGATTATCTTCCTCAAAATCTTGGTAGTTTTGGCAATGGAGTCTCAAGCAGAAGCTCTTGGACAGTTAACTGCTGATGATCTTGAAGGAAAGGTAACAGTTCTCTGCTTTCCCTCCAAATCTAATTTGTGTTTGATTTTATTACTGGTCTATTGAGCTTAAATTCAGAAACTAGAAAGTATCATTTCTCTTACCTGTCCCTTTTTAAGATTTCTGTAAAAGCTTCTTGAGTCTGAGTAAATCCTTCAAGAAGCTTATGAGGGATTTCCTTTATGAAGGAATGAGGAGAAAGGGTAGCATTTAGACGAGTGGGAGGCGGTAATTGTTTCGTATTTTGTAATACCGCAAGTGTACGTGCCAAGTTTTAATATAGTGATAAGAGTGTTCGAGTATCGTCCTCAAGAGTTTCCAATTGATACGTACATTTTAAAACACATGTCGCTGCACAGCTCTGTTTTATTTTGGCTTTCAGCTATTTCCTATATTGTAGTTTGCTCTGCTGGAGGGCTCATCAGTTGATGACGAGCTAGCGGACTTGAAGAGAGAGTTATCTGGAAGCTCAAAGGTAAAATCATATTCCACTCTTTATATATAAGTTTATATCTGACCGTGGCTCGATCTTCTAAGAATGAAACCTAGAATAGGAACCCAATGGAAGCCTCGACTTTCGTAGTAAACTATAACAAGATCGCCTTCCTCGAAAGTTTTCTTTCATTGATGCTTCTCTGCGCAGCTTCCTTATACTTAAAAGTTTGATTTCTCCAAATGATCTTGAACTTCTTTATGGAGTAAGACAATCTGCTCAGCCATTTCACTAGCTTCCTGACTCAAATCAATAGCAAAAAGAAGATTAGCTTATTCCGCATCTAAATGGGAAAGTTTAGTATGTATGTACAATTTCAAACATTCCTTCAGTATTTGAACCTAACAACGGGATCCTCTCTATTTCTACAGAAAGGAGAACTTCCACCAGGAAGAACTGTTTCTGGCAGCGCATTGCCAGTTCGTGATGCCGAGATCGAGTCGGAACTCAATCTACTGAGGCAAAAGGCAAGAGAATTGTAGAGATGCCAAATCAGTAGAACTTTAAATGTCCAAATTTTCATGCTAGTAACTGGCATCATTTCACATTAGAAGTACAGTGTACAGGAAGAAAAAGGTTCCAAACAGATCAACTTTGTATTGCTAAACGCCTACATGAGAGAGTACTTTTTGGATTGAGGTGCAATGGGTTATATATTGATGAATCTGTGGGGATCAAATGTTGTTTGTAAGTTAAATTGCACACAACTCTCTGAACATTGATCAAGTAACTTCTATTTGTATTGGGTTCTTAAGTCAAGAAATTATTTCAAACCACAATAAACCCGATCCTAATTTTCTAAAAACTATATTATGAATAGAGGAATGTACGGTGTTTGACTTTGTGCGTTATATAATCACTAAGACCGTGGTCCAATCAGAAATTTCAAGGAATATGGAAAATTCAAATTCAAATTCTAAAAAACAAAGCCAGAATTTTAGGGGTCAAATTCTTGTATTGGGTAGCTGCAAACTCAT

mRNA sequence

CTTCAAATCGAGCTGGGATTGAATTATTGGAATTGGGCAGGCTTGGCCGGTTGATGAGGCTGAGGTGGAACACAAGCGATCCCCTGTTATCTTCAATCTATCTCAACTCAACACAATTTCACTATTCCGATTCTTTTCTGCAACATTTTTGCTTGGGTTCGATCATTCATGGCTGCCCAAACCCACGTTTTTACCGGATTAGCTTTGGCTTCAACTCCTTCTTCTTCATCTCAACCCTCTTCATCCAAGCCTTCCACCCTCTGTGTTGCCGCCAAGCCCTTGAGCACGTCCTTCCTTAATGGCGGAGGGCACACCTTACAAATTACATGGATGAAGTCTTTACATTTTAATCGATCCCATGGTGGCAGACGTGGAGGTGCTCTTGGTGCTCACATGAACCTTTTTGATCGTTTTGCAAGGGTTGTTAAGTCGTATGCTAATGCACTTATAAGTTCGTTTGAGGATCCGGAGAAAATTCTGGAGCAGACAGTGCTTGAAATGAATGATGACTTGACAAAGATGCGTCAAGCCACTGCACAGGTACTAGCTTCTCAAAAGCGCTTGGAAAACAAGTATAAATCTGCACAGCAAGCTGCTGATGATTGGTATCGAAAGGCGCAATTTGCTCTTCAAAAGGGAGACGATGATCTTGCTCGGGAAGCTTTAAAGAGGCGCAAATCATATGCTGATAACGCAAATGCTTTGAAAGCTCAACTTGATCAGCAGAAGAATGTTGTGGAAAATCTTGTTTCTAATACTCGGCTTTTAGAGAGCAAGATACAAGAGGCGAGGTCAAAGAAAGACACACTGAAAGCGCGTGCTCAGTCTGCAAAGACTGCAACCAAAGTAAGTGAAATGTTGGGGAATGTTAACACAAGCAGTGCTCTTTCTGCTTTTGAGAAGATGGAGGAGAAAGTTTTGGCAATGGAGTCTCAAGCAGAAGCTCTTGGACAGTTAACTGCTGATGATCTTGAAGGAAAGGTAACAGTTCTCTGCTTTCCCTCCAAATCTAATTTGTGTTTGATTTTATTACTGTTTGCTCTGCTGGAGGGCTCATCAGTTGATGACGAGCTAGCGGACTTGAAGAGAGAGTTATCTGGAAGCTCAAAGAAAGGAGAACTTCCACCAGGAAGAACTGTTTCTGGCAGCGCATTGCCAGTTCGTGATGCCGAGATCGAGTCGGAACTCAATCTACTGAGGCAAAAGGCAAGAGAATTGTAGAGATGCCAAATCAGTAGAACTTTAAATGTCCAAATTTTCATGCTAGTAACTGGCATCATTTCACATTAGAAGTACAGTGTACAGGAAGAAAAAGGTTCCAAACAGATCAACTTTGTATTGCTAAACGCCTACATGAGAGAGTACTTTTTGGATTGAGGTGCAATGGGTTATATATTGATGAATCTGTGGGGATCAAATGTTGTTTGTAAGTTAAATTGCACACAACTCTCTGAACATTGATCAAGTAACTTCTATTTGTATTGGGTTCTTAAGTCAAGAAATTATTTCAAACCACAATAAACCCGATCCTAATTTTCTAAAAACTATATTATGAATAGAGGAATGTACGGTGTTTGACTTTGTGCGTTATATAATCACTAAGACCGTGGTCCAATCAGAAATTTCAAGGAATATGGAAAATTCAAATTCAAATTCTAAAAAACAAAGCCAGAATTTTAGGGGTCAAATTCTTGTATTGGGTAGCTGCAAACTCAT

Coding sequence (CDS)

ATGGCTGCCCAAACCCACGTTTTTACCGGATTAGCTTTGGCTTCAACTCCTTCTTCTTCATCTCAACCCTCTTCATCCAAGCCTTCCACCCTCTGTGTTGCCGCCAAGCCCTTGAGCACGTCCTTCCTTAATGGCGGAGGGCACACCTTACAAATTACATGGATGAAGTCTTTACATTTTAATCGATCCCATGGTGGCAGACGTGGAGGTGCTCTTGGTGCTCACATGAACCTTTTTGATCGTTTTGCAAGGGTTGTTAAGTCGTATGCTAATGCACTTATAAGTTCGTTTGAGGATCCGGAGAAAATTCTGGAGCAGACAGTGCTTGAAATGAATGATGACTTGACAAAGATGCGTCAAGCCACTGCACAGGTACTAGCTTCTCAAAAGCGCTTGGAAAACAAGTATAAATCTGCACAGCAAGCTGCTGATGATTGGTATCGAAAGGCGCAATTTGCTCTTCAAAAGGGAGACGATGATCTTGCTCGGGAAGCTTTAAAGAGGCGCAAATCATATGCTGATAACGCAAATGCTTTGAAAGCTCAACTTGATCAGCAGAAGAATGTTGTGGAAAATCTTGTTTCTAATACTCGGCTTTTAGAGAGCAAGATACAAGAGGCGAGGTCAAAGAAAGACACACTGAAAGCGCGTGCTCAGTCTGCAAAGACTGCAACCAAAGTAAGTGAAATGTTGGGGAATGTTAACACAAGCAGTGCTCTTTCTGCTTTTGAGAAGATGGAGGAGAAAGTTTTGGCAATGGAGTCTCAAGCAGAAGCTCTTGGACAGTTAACTGCTGATGATCTTGAAGGAAAGGTAACAGTTCTCTGCTTTCCCTCCAAATCTAATTTGTGTTTGATTTTATTACTGTTTGCTCTGCTGGAGGGCTCATCAGTTGATGACGAGCTAGCGGACTTGAAGAGAGAGTTATCTGGAAGCTCAAAGAAAGGAGAACTTCCACCAGGAAGAACTGTTTCTGGCAGCGCATTGCCAGTTCGTGATGCCGAGATCGAGTCGGAACTCAATCTACTGAGGCAAAAGGCAAGAGAATTGTAG

Protein sequence

MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKVTVLCFPSKSNLCLILLLFALLEGSSVDDELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL

Homology

[Close]

BLAST of Carg15438 vs. NCBI nr
Match: XP_022932749.1 (membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 597.4 bits (1539), Expect = 3.1e-167
Identity = 332/350 (94.86%), Postives = 332/350 (94.86%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF
Sbjct: 40  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 99

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ
Sbjct: 100 NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 159

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK
Sbjct: 160 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 219

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
           AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL
Sbjct: 220 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 279

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKVTVLCFPSKSNLCLILLLFALLEGSSVDD 300
           SAFEKMEEKVLAMESQAEALGQLTADDLEGK                  FALLEGSSVDD
Sbjct: 280 SAFEKMEEKVLAMESQAEALGQLTADDLEGK------------------FALLEGSSVDD 339

Query: 301 ELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL 351
           ELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL
Sbjct: 340 ELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL 371

[Close]

BLAST of Carg15438 vs. NCBI nr
Match: XP_023540726.1 (membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 589.0 bits (1517), Expect = 1.1e-164
Identity = 328/350 (93.71%), Postives = 328/350 (93.71%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MAAQTHVFTGLALAS PSSSSQPSSSKPSTLCVAAKPL TSFLNGGGHTLQITWMKSLHF
Sbjct: 1   MAAQTHVFTGLALASPPSSSSQPSSSKPSTLCVAAKPLRTSFLNGGGHTLQITWMKSLHF 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           NRSHGGR GGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ
Sbjct: 61  NRSHGGRPGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK
Sbjct: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
           AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL
Sbjct: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKVTVLCFPSKSNLCLILLLFALLEGSSVDD 300
           SAFEKMEEKVLAMESQAEALGQLT DDLEGK                  FALLEGSSVDD
Sbjct: 241 SAFEKMEEKVLAMESQAEALGQLTVDDLEGK------------------FALLEGSSVDD 300

Query: 301 ELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL 351
           ELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL
Sbjct: 301 ELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL 332

[Close]

BLAST of Carg15438 vs. NCBI nr
Match: XP_022972228.1 (membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 573.9 bits (1478), Expect = 3.6e-160
Identity = 322/350 (92.00%), Postives = 323/350 (92.29%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MAAQTHVF GLALASTPS     SSSKPSTLCVAAKPL T FLNGGGHTLQITWMK LHF
Sbjct: 1   MAAQTHVFPGLALASTPS-----SSSKPSTLCVAAKPLRTPFLNGGGHTLQITWMKPLHF 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ
Sbjct: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQKRLENKYKS+QQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK
Sbjct: 121 ATAQVLASQKRLENKYKSSQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
           AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL
Sbjct: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKVTVLCFPSKSNLCLILLLFALLEGSSVDD 300
           SAFEKMEEKVLAMESQAEALGQLTADDLEGK                  FALLEGSSVDD
Sbjct: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGK------------------FALLEGSSVDD 300

Query: 301 ELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL 351
           ELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL
Sbjct: 301 ELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL 327

[Close]

BLAST of Carg15438 vs. NCBI nr
Match: XP_022955518.1 (membrane-associated 30 kDa protein, chloroplastic [Cucurbita moschata] >XP_022955519.1 membrane-associated 30 kDa protein, chloroplastic [Cucurbita moschata])

HSP 1 Score: 552.7 bits (1423), Expect = 8.7e-154
Identity = 311/350 (88.86%), Postives = 320/350 (91.43%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MA QTHVFTGLALASTPSSS QPSSSKP+TLCVA K L TSFLNGGG+ LQIT MKSLH 
Sbjct: 1   MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHL 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           +RSHG RRGGALGA MNLFDRFARVVKSYANAL+SSFEDPEKILEQTVLEMNDDLTKMRQ
Sbjct: 61  DRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKS+ADNAN+LK
Sbjct: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
           AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL
Sbjct: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKVTVLCFPSKSNLCLILLLFALLEGSSVDD 300
           SAFEKMEEKV+AMESQAEALGQLTADDLEGK                  FALLEGSSVDD
Sbjct: 241 SAFEKMEEKVMAMESQAEALGQLTADDLEGK------------------FALLEGSSVDD 300

Query: 301 ELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL 351
           ELA+LK+ELSGSSKKGELPPGRTVSGSA PVRDAEIESELN LRQKAREL
Sbjct: 301 ELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL 332

[Close]

BLAST of Carg15438 vs. NCBI nr
Match: XP_023528686.1 (membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 552.4 bits (1422), Expect = 1.1e-153
Identity = 311/350 (88.86%), Postives = 319/350 (91.14%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MA QTHVFTGLALASTPSSS QPSSSKP TLCVA K L TSFLNGGG+ LQIT MKSLH 
Sbjct: 1   MAVQTHVFTGLALASTPSSSFQPSSSKPGTLCVATKLLRTSFLNGGGNILQITEMKSLHL 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           +RSHG RRGGALGA MNLFDRFARVVKSYANAL+SSFEDPEKILEQTVLEMNDDLTKMRQ
Sbjct: 61  DRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKS+ADNAN+LK
Sbjct: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
           AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL
Sbjct: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKVTVLCFPSKSNLCLILLLFALLEGSSVDD 300
           SAFEKMEEKV+AMESQAEALGQLTADDLEGK                  FALLEGSSVDD
Sbjct: 241 SAFEKMEEKVMAMESQAEALGQLTADDLEGK------------------FALLEGSSVDD 300

Query: 301 ELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL 351
           ELA+LK+ELSGSSKKGELPPGRTVSGSA PVRDAEIESELN LRQKAREL
Sbjct: 301 ELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL 332

[Close]

BLAST of Carg15438 vs. TAIR10
Match: AT1G65260.1 (plastid transcriptionally active 4)

HSP 1 Score: 376.3 bits (965), Expect = 2.0e-104
Identity = 225/351 (64.10%), Postives = 266/351 (75.78%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MA +    TGL     P++SS PS+S      +   PL TSF       L++  ++    
Sbjct: 1   MALKASPVTGLFPPLRPTASSSPSTSSNRPCSLRILPLRTSFFGNSSGALRVNVLRLACD 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           NR     R    GA MNLF+RF+RVVKSYANALISSFEDPEKILEQTV+EMN DLTKMRQ
Sbjct: 61  NR----LRCNGHGATMNLFERFSRVVKSYANALISSFEDPEKILEQTVIEMNSDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQK+L+NKYK+AQQ++DDWY++AQ AL KGD+DLAREALKRRKS+ADNA ALK
Sbjct: 121 ATAQVLASQKQLQNKYKAAQQSSDDWYKRAQLALAKGDEDLAREALKRRKSFADNATALK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
            QLDQQK VV+NLVSNTRLLESKIQEA++KKDTL ARA++AKTATKV EM+G VNTS AL
Sbjct: 181 TQLDQQKGVVDNLVSNTRLLESKIQEAKAKKDTLLARARTAKTATKVQEMIGTVNTSGAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKVTVLCFPSKSNLCLILLLFALLEGSSVDD 300
           SAFEKMEEKV+AMES+A+AL Q+  D+LEGK                  F +LE SSVDD
Sbjct: 241 SAFEKMEEKVMAMESEADALTQIGTDELEGK------------------FQMLETSSVDD 300

Query: 301 ELADLKRELSGSSKKGELPPGR-TVSGSA-LPVRDAEIESELNLLRQKARE 350
           +LADLK+ELSGSSKKGELPPGR TV+ S   P +D+EIE+ELN LR+KA +
Sbjct: 301 DLADLKKELSGSSKKGELPPGRSTVAASTRYPFKDSEIENELNELRRKAND 329

[Close]

BLAST of Carg15438 vs. Swiss-Prot
Match: sp|Q03943|IM30_PEA (Membrane-associated 30 kDa protein, chloroplastic OS=Pisum sativum OX=3888 GN=IM30 PE=2 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.4e-110
Identity = 240/356 (67.42%), Postives = 277/356 (77.81%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           M  +  +F+GL     PS+  QPSSS      +  KPL+T+       T  +  +K    
Sbjct: 1   MTTKFQIFSGL-----PSAPLQPSSS------LLKKPLATTLFG----TRPVDTLKFRVM 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
             +   R GGA+G  MNLFDRFARVVKSYANAL+S+FEDPEKILEQ VLEMNDDLTKMRQ
Sbjct: 61  RIAKPVRGGGAIGVRMNLFDRFARVVKSYANALVSTFEDPEKILEQAVLEMNDDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQKRLENKYK+AQQA+++WYRKAQ ALQKG++DLAREALKRRKS+ADNA++LK
Sbjct: 121 ATAQVLASQKRLENKYKAAQQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASSLK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
           AQLDQQK+VV+NLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL
Sbjct: 181 AQLDQQKSVVDNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKVTVLCFPSKSNLCLILLLFALLEGSSVDD 300
           SAFEKMEEKV+ MESQAEALGQLT DDLEGK                  FA+LE SSVDD
Sbjct: 241 SAFEKMEEKVMTMESQAEALGQLTTDDLEGK------------------FAMLETSSVDD 300

Query: 301 ELADLKRELSGSSKKGELPPGRTVSGSAL------PVRDAEIESELNLLRQKAREL 351
           +LA+LK+EL+GSSKKGELPPGR+ + S        P RDA+IE EL  LR++++EL
Sbjct: 301 DLANLKKELAGSSKKGELPPGRSSTTSXXXXKTGNPFRDADIEIELEQLRKRSKEL 323

[Close]

BLAST of Carg15438 vs. Swiss-Prot
Match: sp|Q8S0J7|IM30_ORYSJ (Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0895100 PE=1 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.6e-106
Identity = 229/336 (68.15%), Postives = 262/336 (77.98%), Query Frame = 0


Query: 17  PSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHM 76
           P +S + +   P++       L TSFLN G  +L++  ++  + NR          G   
Sbjct: 6   PPTSLRLAPPPPASASFRRTALRTSFLN-GSVSLRLIQVRQSNVNRFK------CNGIRS 65

Query: 77  NLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKY 136
           NL DRF+RVVKSYANA++SSFEDPEKIL+Q VLEMNDDLTKMRQATAQVLASQKRLENKY
Sbjct: 66  NLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLENKY 125

Query: 137 KSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSN 196
           K+A+QA+DDWYR+AQ ALQKGD+DLAREALKRRKSYADNA++LKAQLDQQK VVENLVSN
Sbjct: 126 KAAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNASSLKAQLDQQKGVVENLVSN 185

Query: 197 TRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQ 256
           TR+LESKI EA+ KKDTLKARAQSAKT+TKVSEMLGNVNTS ALSAFEKMEEKV+AMESQ
Sbjct: 186 TRVLESKIAEAKQKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMAMESQ 245

Query: 257 AEALGQLTADDLEGKVTVLCFPSKSNLCLILLLFALLEGSSVDDELADLKRELSGSSKKG 316
           AEALGQL  DDLEGK                  FALLE SSVDD+LA +K+E+SGSS KG
Sbjct: 246 AEALGQLATDDLEGK------------------FALLETSSVDDDLAQMKKEISGSSSKG 305

Query: 317 ELPPGRTV---SGSALPVRDAEIESELNLLRQKARE 350
           ELPPGRT    SG+A P RD EIE+ELN LR+KA E
Sbjct: 306 ELPPGRTAVSNSGAARPFRDIEIENELNELRKKANE 316

[Close]

BLAST of Carg15438 vs. Swiss-Prot
Match: sp|O80796|VIPP1_ARATH (Membrane-associated protein VIPP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VIPP1 PE=1 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 3.6e-103
Identity = 225/351 (64.10%), Postives = 266/351 (75.78%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MA +    TGL     P++SS PS+S      +   PL TSF       L++  ++    
Sbjct: 1   MALKASPVTGLFPPLRPTASSSPSTSSNRPCSLRILPLRTSFFGNSSGALRVNVLRLACD 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           NR     R    GA MNLF+RF+RVVKSYANALISSFEDPEKILEQTV+EMN DLTKMRQ
Sbjct: 61  NR----LRCNGHGATMNLFERFSRVVKSYANALISSFEDPEKILEQTVIEMNSDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQK+L+NKYK+AQQ++DDWY++AQ AL KGD+DLAREALKRRKS+ADNA ALK
Sbjct: 121 ATAQVLASQKQLQNKYKAAQQSSDDWYKRAQLALAKGDEDLAREALKRRKSFADNATALK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
            QLDQQK VV+NLVSNTRLLESKIQEA++KKDTL ARA++AKTATKV EM+G VNTS AL
Sbjct: 181 TQLDQQKGVVDNLVSNTRLLESKIQEAKAKKDTLLARARTAKTATKVQEMIGTVNTSGAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKVTVLCFPSKSNLCLILLLFALLEGSSVDD 300
           SAFEKMEEKV+AMES+A+AL Q+  D+LEGK                  F +LE SSVDD
Sbjct: 241 SAFEKMEEKVMAMESEADALTQIGTDELEGK------------------FQMLETSSVDD 300

Query: 301 ELADLKRELSGSSKKGELPPGR-TVSGSA-LPVRDAEIESELNLLRQKARE 350
           +LADLK+ELSGSSKKGELPPGR TV+ S   P +D+EIE+ELN LR+KA +
Sbjct: 301 DLADLKKELSGSSKKGELPPGRSTVAASTRYPFKDSEIENELNELRRKAND 329

[Close]

BLAST of Carg15438 vs. Swiss-Prot
Match: sp|Q55707|Y617_SYNY3 (Uncharacterized protein sll0617 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll0617 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.8e-39
Identity = 93/194 (47.94%), Postives = 132/194 (68.04%), Query Frame = 0


Query: 76  MNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENK 135
           M LFDR  RVV++  N L+S  EDPEK+LEQ V++M +DL ++RQA A+ +A +KR E +
Sbjct: 1   MGLFDRLGRVVRANLNDLVSKAEDPEKVLEQAVIDMQEDLVQLRQAVARTIAEEKRTEQR 60

Query: 136 YKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVS 195
                Q A  W  +A+ AL  G+++LAREAL R+KS  D A A + QL QQ+ + ENL  
Sbjct: 61  LNQDTQEAKKWEDRAKLALTNGEENLAREALARKKSLTDTAAAYQTQLAQQRTMSENLRR 120

Query: 196 NTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMES 255
           N   LE+KI EA++KK+ L+ARA++AK   ++ + LG + TSSA SAFE+ME KVL ME+
Sbjct: 121 NLAALEAKISEAKTKKNMLQARAKAAKANAELQQTLGGLGTSSATSAFERMENKVLDMEA 180

Query: 256 QAEALGQLTADDLE 270
            ++A G+L    +E
Sbjct: 181 TSQAAGELAGFGIE 194

[Close]

BLAST of Carg15438 vs. Swiss-Prot
Match: sp|Q9RUB7|PSPA_DEIRA (Phage shock protein A homolog OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) OX=243230 GN=DR_1473 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.2e-18
Identity = 60/174 (34.48%), Postives = 100/174 (57.47%), Query Frame = 0


Query: 76  MNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENK 135
           M++FDR +R++++  N +IS  EDP KI++Q + +M       R   A  +A   +LE +
Sbjct: 1   MSIFDRLSRLLRANVNDMISKAEDPAKIIDQALRDMRSAYADARNEVAGAMAQAAKLERE 60

Query: 136 YKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVS 195
             +  + A ++ +KA+ AL+ G +DLAREAL+R +++ D A     Q   Q++ V+ L +
Sbjct: 61  AGTNSKLAAEYEKKAEEALRGGSEDLAREALRRAQNHKDLAKGFDEQRTVQQSTVDQLKT 120

Query: 196 NTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEK 250
             R LE+KI E  SKK  L AR ++A+    +  + G      A+ AF +ME+K
Sbjct: 121 QLRALEAKIDEMESKKTLLAARQKTAQAGETLDRVSGFSKAGGAMDAFNEMEQK 174

[Close]

BLAST of Carg15438 vs. TrEMBL
Match: tr|A0A1S3BX93|A0A1S3BX93_CUCME (membrane-associated 30 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494597 PE=4 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 2.2e-153
Identity = 310/350 (88.57%), Postives = 320/350 (91.43%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MAAQTHVFTGLALASTPSSS QPSSSKP+TLCVA+K L TSFLNGGG+TLQIT MKSLH 
Sbjct: 1   MAAQTHVFTGLALASTPSSSFQPSSSKPTTLCVASKLLRTSFLNGGGNTLQITRMKSLHL 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           +RSHG RRGGALGA MNLFDR AR+VKSYANAL+SSFEDPEKILEQTVLEMNDDLTKMRQ
Sbjct: 61  DRSHGSRRGGALGARMNLFDRVARLVKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQKRLENKYKSAQQAADDWYRKAQ ALQKGDDDLAREALKRRKSYADNANALK
Sbjct: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQLALQKGDDDLAREALKRRKSYADNANALK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
           AQLDQQK+VVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL
Sbjct: 181 AQLDQQKSVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKVTVLCFPSKSNLCLILLLFALLEGSSVDD 300
           SAFEKMEEKVLAMESQAEALGQLT DDLEGK                  FALLEGSSVDD
Sbjct: 241 SAFEKMEEKVLAMESQAEALGQLTTDDLEGK------------------FALLEGSSVDD 300

Query: 301 ELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL 351
           ELA+LK+ELSGSSKKGELPPGRTVSGSA PVRDAEIESELN LRQ+AREL
Sbjct: 301 ELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQRAREL 332

[Close]

BLAST of Carg15438 vs. TrEMBL
Match: tr|A0A0A0KXA3|A0A0A0KXA3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011060 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 1.1e-152
Identity = 309/350 (88.29%), Postives = 318/350 (90.86%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MAAQTHVFTGLALASTPSSS QPSSSKP+TLCVA+K L TSFLNGGG+TLQIT M SLH 
Sbjct: 1   MAAQTHVFTGLALASTPSSSFQPSSSKPATLCVASKLLRTSFLNGGGNTLQITRMNSLHL 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           +RSHG RRGGALGA MNLFDR AR+VKSYANAL+SSFEDPEKILEQTVLEMNDDLTKMRQ
Sbjct: 61  DRSHGSRRGGALGARMNLFDRVARLVKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQKRLENKYKSAQQAADDWYRKAQ ALQKGDDDLAREALKRRKSYADNANALK
Sbjct: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQLALQKGDDDLAREALKRRKSYADNANALK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
           AQLDQQK VVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL
Sbjct: 181 AQLDQQKGVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKVTVLCFPSKSNLCLILLLFALLEGSSVDD 300
           SAFEKMEEKVLAMESQAEALGQLT DDLEGK                  FALLEGSSVDD
Sbjct: 241 SAFEKMEEKVLAMESQAEALGQLTTDDLEGK------------------FALLEGSSVDD 300

Query: 301 ELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL 351
           ELA+LK+ELSGSSKKGELPPGRTVSGSA PVRDAEIESELN LRQ+AREL
Sbjct: 301 ELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQRAREL 332

[Close]

BLAST of Carg15438 vs. TrEMBL
Match: tr|A0A2P5FW42|A0A2P5FW42_9ROSA (PspA/IM OS=Trema orientalis OX=63057 GN=TorRG33x02_022900 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 5.6e-125
Identity = 263/353 (74.50%), Postives = 298/353 (84.42%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MAA+  +FTGL LA+TP+ +S  S S   +LCV  +PL+TSFL GG  +L++  ++S   
Sbjct: 1   MAAKPQIFTGLTLAATPTPASS-SCSYSLSLCVVKRPLTTSFLGGGVGSLKVDVIRSARS 60

Query: 61  NRSH-GGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMR 120
            + H  G  GGALGA MNLFDRF+RVVKSYANALISSFEDPEKILEQTV+EMN+DLTKMR
Sbjct: 61  GKPHSSGNCGGALGARMNLFDRFSRVVKSYANALISSFEDPEKILEQTVIEMNEDLTKMR 120

Query: 121 QATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANAL 180
           QATAQVLASQKRLENKYK+AQQA++DWYRKAQFAL+KGD+DLAREALKRRKS+ADNAN+L
Sbjct: 121 QATAQVLASQKRLENKYKAAQQASEDWYRKAQFALEKGDEDLAREALKRRKSFADNANSL 180

Query: 181 KAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSA 240
           KAQLDQQK+VVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSE+LGNVNTSSA
Sbjct: 181 KAQLDQQKSVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSELLGNVNTSSA 240

Query: 241 LSAFEKMEEKVLAMESQAEALGQLTADDLEGKVTVLCFPSKSNLCLILLLFALLEGSSVD 300
           LSAFEKMEEKV+AMESQAEALGQLTADDLEGK                  FALLEGSSVD
Sbjct: 241 LSAFEKMEEKVMAMESQAEALGQLTADDLEGK------------------FALLEGSSVD 300

Query: 301 DELADLKRELSGSSKKGELPPGRTVSGSA---LPVRDAEIESELNLLRQKARE 350
           D+LA+LK+ELSG SKKGELPPGRTV+ S+    P +DAEIE EL  LRQKA++
Sbjct: 301 DDLANLKKELSGGSKKGELPPGRTVASSSNAPYPFQDAEIERELKELRQKAKD 334

[Close]

BLAST of Carg15438 vs. TrEMBL
Match: tr|M5XRG9|M5XRG9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G203200 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 2.8e-124
Identity = 262/353 (74.22%), Postives = 291/353 (82.44%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MA +  +FTG  +ASTP+SS Q SSS   +L +  KPL+TSF NGG   L++  ++    
Sbjct: 1   MATKLQIFTGFPMASTPASSFQASSSSSYSLAMVRKPLTTSFFNGGVGALKVEVIRVAPS 60

Query: 61  NRSHGGR-RGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMR 120
           NR H  R RGGALGA MNLFDRFARVVKSYANALIS+FEDPEKILEQ VLEMNDDLTKMR
Sbjct: 61  NRPHYSRQRGGALGARMNLFDRFARVVKSYANALISTFEDPEKILEQAVLEMNDDLTKMR 120

Query: 121 QATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANAL 180
           QATAQVLASQKRLENKYK+A+QA++DWYRKAQ ALQKG++DLAREALKRRKS+ADNAN L
Sbjct: 121 QATAQVLASQKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSFADNANTL 180

Query: 181 KAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSA 240
           KAQLDQQK VV+NLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEM+GNVNTSSA
Sbjct: 181 KAQLDQQKGVVDNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMVGNVNTSSA 240

Query: 241 LSAFEKMEEKVLAMESQAEALGQLTADDLEGKVTVLCFPSKSNLCLILLLFALLEGSSVD 300
           LSAFEKMEEKVLAMESQAEA+GQLT DDLEGK                  FALLE SSVD
Sbjct: 241 LSAFEKMEEKVLAMESQAEAIGQLTTDDLEGK------------------FALLESSSVD 300

Query: 301 DELADLKRELSGSSKKGELPPGRTV---SGSALPVRDAEIESELNLLRQKARE 350
           D+LA+LK+ELSGSSKKGELPPGRT    S  A P RD+EIE ELN LR+KA++
Sbjct: 301 DDLANLKKELSGSSKKGELPPGRTAAPSSNKAYPFRDSEIEMELNELRRKAKD 335

[Close]

BLAST of Carg15438 vs. TrEMBL
Match: tr|A0A2P5DWN2|A0A2P5DWN2_PARAD (PspA/IM OS=Parasponia andersonii OX=3476 GN=PanWU01x14_024620 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 3.6e-124
Identity = 262/353 (74.22%), Postives = 296/353 (83.85%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MAA+  +FTGL LA T + +S  S S   +LCV  +PL+TSF  GG  +L++  ++S   
Sbjct: 1   MAAKPQIFTGLTLAVTATPASS-SCSYSLSLCVVKRPLTTSFFGGGVGSLKVDVIRSTRS 60

Query: 61  NRSH-GGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMR 120
            + H  G RGGA GA MNLFDRF+RVVKSYANALISSFEDPEKILEQTV+EMN+DLTKMR
Sbjct: 61  GKPHSSGNRGGAFGARMNLFDRFSRVVKSYANALISSFEDPEKILEQTVIEMNEDLTKMR 120

Query: 121 QATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANAL 180
           QATAQVLASQKRLENKYK+AQQA++DWYRKAQFAL+KGD+DLAREALKRRKS+ADNAN+L
Sbjct: 121 QATAQVLASQKRLENKYKAAQQASEDWYRKAQFALEKGDEDLAREALKRRKSFADNANSL 180

Query: 181 KAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSA 240
           KAQLDQQK+VVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSE+LGNVNTSSA
Sbjct: 181 KAQLDQQKSVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSELLGNVNTSSA 240

Query: 241 LSAFEKMEEKVLAMESQAEALGQLTADDLEGKVTVLCFPSKSNLCLILLLFALLEGSSVD 300
           LSAFEKMEEKV+AMESQAEALGQLTADDLEGK                  FALLEGSSVD
Sbjct: 241 LSAFEKMEEKVMAMESQAEALGQLTADDLEGK------------------FALLEGSSVD 300

Query: 301 DELADLKRELSGSSKKGELPPGRTVSGSA---LPVRDAEIESELNLLRQKARE 350
           D+LA+LK+ELSGSSKKGELPPGRTV+ S+    P +DAEIE EL  LRQKA++
Sbjct: 301 DDLANLKKELSGSSKKGELPPGRTVASSSNTPYPFQDAEIERELKELRQKAKD 334

The following BLAST results are available for this feature:

BLAST of Carg15438 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932749.1	3.1e-167	94.86	membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita moschata]	[more]
XP_023540726.1	1.1e-164	93.71	membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pe...	[more]
XP_022972228.1	3.6e-160	92.00	membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita maxima]	[more]
XP_022955518.1	8.7e-154	88.86	membrane-associated 30 kDa protein, chloroplastic [Cucurbita moschata] >XP_02295...	[more]
XP_023528686.1	1.1e-153	88.86	membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pe...	[more]

BLAST of Carg15438 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65260.1	2.0e-104	64.10	plastid transcriptionally active 4	[more]

BLAST of Carg15438 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q03943\|IM30_PEA	1.4e-110	67.42	Membrane-associated 30 kDa protein, chloroplastic OS=Pisum sativum OX=3888 GN=IM...	[more]
sp\|Q8S0J7\|IM30_ORYSJ	1.6e-106	68.15	Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp...	[more]
sp\|O80796\|VIPP1_ARATH	3.6e-103	64.10	Membrane-associated protein VIPP1, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q55707\|Y617_SYNY3	4.8e-39	47.94	Uncharacterized protein sll0617 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]
sp\|Q9RUB7\|PSPA_DEIRA	1.2e-18	34.48	Phage shock protein A homolog OS=Deinococcus radiodurans (strain ATCC 13939 / DS...	[more]

BLAST of Carg15438 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BX93\|A0A1S3BX93_CUCME	2.2e-153	88.57	membrane-associated 30 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|A0A0A0KXA3\|A0A0A0KXA3_CUCSA	1.1e-152	88.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011060 PE=4 SV=1	[more]
tr\|A0A2P5FW42\|A0A2P5FW42_9ROSA	5.6e-125	74.50	PspA/IM OS=Trema orientalis OX=63057 GN=TorRG33x02_022900 PE=4 SV=1	[more]
tr\|M5XRG9\|M5XRG9_PRUPE	2.8e-124	74.22	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G203200 PE=4 SV=1	[more]
tr\|A0A2P5DWN2\|A0A2P5DWN2_PARAD	3.6e-124	74.22	PspA/IM OS=Parasponia andersonii OX=3476 GN=PanWU01x14_024620 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007157	PspA_IM30

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15438-RA	Carg15438-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 333..350
None	No IPR available	COILS	Coil	Coil	coord: 129..149
None	No IPR available	COILS	Coil	Coil	coord: 162..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..330
None	No IPR available	PANTHER	PTHR31088:SF6	MEMBRANE-ASSOCIATED PROTEIN VIPP1, CHLOROPLASTIC	coord: 76..273
None	No IPR available	PANTHER	PTHR31088	FAMILY NOT NAMED	coord: 76..273
IPR007157	PspA/IM30	PFAM	PF04012	PspA_IM30	coord: 77..266 e-value: 7.6E-55 score: 185.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15438	Cla010899	Watermelon (97103) v1	carwmB0690
Carg15438	Csa4G011060	Cucumber (Chinese Long) v2	carcuB0716
Carg15438	MELO3C017774	Melon (DHL92) v3.5.1	carmeB0694
Carg15438	ClCG07G015120	Watermelon (Charleston Gray)	carwcgB0670
Carg15438	CSPI04G02740	Wild cucumber (PI 183967)	carcpiB0730
Carg15438	Cucsa.095400	Cucumber (Gy14) v1	carcgyB0775
Carg15438	CmaCh06G016970	Cucurbita maxima (Rimu)	carcmaB0974
Carg15438	CmaCh14G014280	Cucurbita maxima (Rimu)	carcmaB0972
Carg15438	CmoCh06G016880	Cucurbita moschata (Rifu)	carcmoB0947
Carg15438	CmoCh14G014640	Cucurbita moschata (Rifu)	carcmoB0946
Carg15438	Lsi07G003500	Bottle gourd (USVL1VR-Ls)	carlsiB635
Carg15438	Cp4.1LG03g13110	Cucurbita pepo (Zucchini)	carcpeB0973
Carg15438	Cp4.1LG08g06270	Cucurbita pepo (Zucchini)	carcpeB0974
Carg15438	CsGy4G002590	Cucumber (Gy14) v2	carcgybB0693
Carg15438	MELO3C017774.2	Melon (DHL92) v3.6.1	carmedB0707
Carg15438	CsaV3_4G002670	Cucumber (Chinese Long) v3	carcucB0733
Carg15438	Cla97C07G142090	Watermelon (97103) v2	carwmbB0722
Carg15438	Bhi01G002857	Wax gourd	carwgoB0814

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15438	Carg06579	Silver-seed gourd	carcarB142

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15438	Wax gourd	carwgoB0813
Carg15438	Wax gourd	carwgoB0818
Carg15438	Silver-seed gourd	carcarB013
Carg15438	Cucumber (Gy14) v1	carcgyB0778
Carg15438	Cucurbita maxima (Rimu)	carcmaB0973
Carg15438	Wild cucumber (PI 183967)	carcpiB0731
Carg15438	Cucumber (Chinese Long) v3	carcucB0734
Carg15438	Bottle gourd (USVL1VR-Ls)	carlsiB631
Carg15438	Melon (DHL92) v3.5.1	carmeB0691
Carg15438	Melon (DHL92) v3.6.1	carmedB0704
Carg15438	Watermelon (Charleston Gray)	carwcgB0669
Carg15438	Watermelon (97103) v1	carwmB0693
Carg15438	Watermelon (97103) v2	carwmbB0721