Carg15382 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATGAACTCTCAAGTTTAAAGCCATAAACAAAACTCTTTCATCTCAAAACCCTTCTTTCTTCTATACAACCCATTTGAAGATATGAAGGCCATTGCTTCGTCGATTTTGTTCTTCAATTTCTGCGCTAGCATCGTCATTTTCGGGATCGGTGGCTGGGTGATGAATCACTCAATTGATAATGGATTTGTTATTGGTTTGAATCAACTCTGTTTCCTCATCTTTCTGCTGTTCTTCTTTCAACTATGGTGTTGATGTTTCTTTTAGTGGTAATTTTGTGCAAGTGTTTCATTTTCAGGTGCTGAGTTTGAAGTCCCTGTATATTTTTCTCCAATTTTCTTCCAAATTGGGAACACTGCCACTGGGTTCTTCGTTGTTTTTGCTTTGATTGCTGCTGTTGCTACTGTTGCATCTGTCATCTCTGGAAGCTTCTACTTACGTTCTTCCGACGCTAACAACTTGCCCCTCGCTGCCAACTTGCCCCCCGCTGCTTCATCAGCTCTCATCGCCTGCTTCCTAACTTTTCTCGCTATGGGGTATGCAAGTTCAAATCTTATTTTGTGAGACCTCATCGGTTAGAGAGGGGAACGAAACACTCCTTATAAGCATGTGAAAACCTCTCCCTAGTAGACACGTTTTAAAACTTTGAGGAAAATCACATCAAAGATTATAACCAGAATGAATATCATTGATGCAGGTTTGCTTGGAAAGAGATCTCCCAAACTGTCACCAGTGGTCATCTGGTGAGGAACCCAAAACTTCTCTCTTTAATTTTTCCCTTTTAGAGACTTTGTTTCAGTTCTCCAAAAGTGATCACAAAGTTAGTAGAAACTACGGAGCTAAGGTTGAGTTCCTTTATGTTTTCTTATGCAGATGGCATTGGAGGCTCTCGTAATTATCCTTTCAGTTACGCAGTTTATTTACACTGCAATCATTGTGTGCACCCCAACCAGCCAGTCGACTCGAAATAACGTTCGGTGAACGCTTAGTTAGTGGGGTTTGCTTTCAAATTTTCTTTCCTTTCCATTCTTTATTTTTCTCTACTTCAGCTCTATATGTAAATGGGGAGAAACTCACAGTTGGTGTGCAAAAAAAGAATAAAATTTCAATGACTTTGATG GATGAACTCTCAAGTTTAAAGCCATAAACAAAACTCTTTCATCTCAAAACCCTTCTTTCTTCTATACAACCCATTTGAAGATATGAAGGCCATTGCTTCGTCGATTTTGTTCTTCAATTTCTGCGCTAGCATCGTCATTTTCGGGATCGGTGGCTGGGTGATGAATCACTCAATTGATAATGGATTTGTTATTGGTGCTGAGTTTGAAGTCCCTGTATATTTTTCTCCAATTTTCTTCCAAATTGGGAACACTGCCACTGGGTTCTTCGTTGTTTTTGCTTTGATTGCTGCTGTTGCTACTGTTGCATCTGTCATCTCTGGAAGCTTCTACTTACGTTCTTCCGACGCTAACAACTTGCCCCTCGCTGCCAACTTGCCCCCCGCTGCTTCATCAGCTCTCATCGCCTGCTTCCTAACTTTTCTCGCTATGGGGTTTGCTTGGAAAGAGATCTCCCAAACTGTCACCAGTGGTCATCTGATGGCATTGGAGGCTCTCGTAATTATCCTTTCAGTTACGCAGTTTATTTACACTGCAATCATTGTGTGCACCCCAACCAGCCAGTCGACTCGAAATAACGTTCGGTGAACGCTTAGTTAGTGGGGTTTGCTTTCAAATTTTCTTTCCTTTCCATTCTTTATTTTTCTCTACTTCAGCTCTATATGTAAATGGGGAGAAACTCACAGTTGGTGTGCAAAAAAAGAATAAAATTTCAATGACTTTGATG ATGAAGGCCATTGCTTCGTCGATTTTGTTCTTCAATTTCTGCGCTAGCATCGTCATTTTCGGGATCGGTGGCTGGGTGATGAATCACTCAATTGATAATGGATTTGTTATTGGTGCTGAGTTTGAAGTCCCTGTATATTTTTCTCCAATTTTCTTCCAAATTGGGAACACTGCCACTGGGTTCTTCGTTGTTTTTGCTTTGATTGCTGCTGTTGCTACTGTTGCATCTGTCATCTCTGGAAGCTTCTACTTACGTTCTTCCGACGCTAACAACTTGCCCCTCGCTGCCAACTTGCCCCCCGCTGCTTCATCAGCTCTCATCGCCTGCTTCCTAACTTTTCTCGCTATGGGGTTTGCTTGGAAAGAGATCTCCCAAACTGTCACCAGTGGTCATCTGATGGCATTGGAGGCTCTCGTAATTATCCTTTCAGTTACGCAGTTTATTTACACTGCAATCATTGTGTGCACCCCAACCAGCCAGTCGACTCGAAATAACGTTCGGTGA MKAIASSILFFNFCASIVIFGIGGWVMNHSIDNGFVIGAEFEVPVYFSPIFFQIGNTATGFFVVFALIAAVATVASVISGSFYLRSSDANNLPLAANLPPAASSALIACFLTFLAMGFAWKEISQTVTSGHLMALEALVIILSVTQFIYTAIIVCTPTSQSTRNNVR
BLAST of Carg15382 vs. NCBI nr
Match: XP_023543821.1 (uncharacterized protein LOC111803574 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 282.0 bits (720), Expect = 1.4e-72 Identity = 152/159 (95.60%), Postives = 153/159 (96.23%), Query Frame = 0
BLAST of Carg15382 vs. NCBI nr
Match: XP_022925784.1 (uncharacterized protein LOC111433089 [Cucurbita moschata]) HSP 1 Score: 281.2 bits (718), Expect = 2.3e-72 Identity = 151/159 (94.97%), Postives = 152/159 (95.60%), Query Frame = 0
BLAST of Carg15382 vs. NCBI nr
Match: XP_022978777.1 (uncharacterized protein LOC111478636 [Cucurbita maxima]) HSP 1 Score: 263.1 bits (671), Expect = 6.5e-67 Identity = 144/166 (86.75%), Postives = 150/166 (90.36%), Query Frame = 0
BLAST of Carg15382 vs. NCBI nr
Match: XP_008439689.1 (PREDICTED: uncharacterized protein LOC103484407 [Cucumis melo]) HSP 1 Score: 238.8 bits (608), Expect = 1.3e-59 Identity = 128/159 (80.50%), Postives = 141/159 (88.68%), Query Frame = 0
BLAST of Carg15382 vs. NCBI nr
Match: XP_004134640.1 (PREDICTED: uncharacterized protein LOC101209586 [Cucumis sativus] >XP_011658272.1 PREDICTED: uncharacterized protein LOC101209586 [Cucumis sativus] >KGN49356.1 hypothetical protein Csa_6G521030 [Cucumis sativus]) HSP 1 Score: 231.5 bits (589), Expect = 2.1e-57 Identity = 122/160 (76.25%), Postives = 137/160 (85.62%), Query Frame = 0
BLAST of Carg15382 vs. TAIR10
Match: AT1G29520.1 (AWPM-19-like family protein) HSP 1 Score: 141.4 bits (355), Expect = 5.2e-34 Identity = 78/153 (50.98%), Postives = 102/153 (66.67%), Query Frame = 0
BLAST of Carg15382 vs. TAIR10
Match: AT5G46530.1 (AWPM-19-like family protein) HSP 1 Score: 110.5 bits (275), Expect = 9.8e-25 Identity = 66/153 (43.14%), Postives = 90/153 (58.82%), Query Frame = 0
BLAST of Carg15382 vs. TAIR10
Match: AT5G18970.1 (AWPM-19-like family protein) HSP 1 Score: 85.1 bits (209), Expect = 4.4e-17 Identity = 60/152 (39.47%), Postives = 82/152 (53.95%), Query Frame = 0
BLAST of Carg15382 vs. TAIR10
Match: AT1G04560.1 (AWPM-19-like family protein) HSP 1 Score: 57.8 bits (138), Expect = 7.6e-09 Identity = 53/151 (35.10%), Postives = 80/151 (52.98%), Query Frame = 0
BLAST of Carg15382 vs. Swiss-Prot
Match: sp|Q6L4D2|PM19L_ORYSJ (Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.6e-08 Identity = 53/153 (34.64%), Postives = 77/153 (50.33%), Query Frame = 0
BLAST of Carg15382 vs. TrEMBL
Match: tr|A0A1S3AZB2|A0A1S3AZB2_CUCME (uncharacterized protein LOC103484407 OS=Cucumis melo OX=3656 GN=LOC103484407 PE=4 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 8.7e-60 Identity = 128/159 (80.50%), Postives = 141/159 (88.68%), Query Frame = 0
BLAST of Carg15382 vs. TrEMBL
Match: tr|A0A0A0KNQ2|A0A0A0KNQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G521030 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 1.4e-57 Identity = 122/160 (76.25%), Postives = 137/160 (85.62%), Query Frame = 0
BLAST of Carg15382 vs. TrEMBL
Match: tr|A0A2P6Q584|A0A2P6Q584_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0012871 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.8e-33 Identity = 82/153 (53.59%), Postives = 108/153 (70.59%), Query Frame = 0
BLAST of Carg15382 vs. TrEMBL
Match: tr|A0A022RS06|A0A022RS06_ERYGU (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a015292mg PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.6e-32 Identity = 82/153 (53.59%), Postives = 105/153 (68.63%), Query Frame = 0
BLAST of Carg15382 vs. TrEMBL
Match: tr|M4D2X2|M4D2X2_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 1.0e-31 Identity = 81/153 (52.94%), Postives = 105/153 (68.63%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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