Carg15327 (gene) Silver-seed gourd

Overview
NameCarg15327
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionATP synthase mitochondrial F1 complex assembly factor 1
LocationCucurbita_argyrosperma_scaffold_085 : 367672 .. 370066 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTGATAAAAGTATTGTTTACCCGATTGATTTTTTAATTTCATTTCTCCGCGATGCGAAGCTCTTCGTTACGACCGTTGAGGACCATTGCTGGTTCTGCGAAATTTTTTCTCGCTAGTGCTTCGCCGGCGGTTCGACAATCTTCTCGTTCCTATTTTGCTAATGCGAGTCTTGAGAAACTGCAGAAGGAAGCTATTCCTTGTGATTTCCTCAAATGGTGTTCGATTGGTTTCTTTCGGACTTCAAGATTCGCTTCGGGGTTCGCCCCCTTGCAACAAAAGCCGTTGGATTCGATTATGGATATGGAGAGGGCGAAAGATCGGTCACCGGAGGACCTCGCTTCCATCTGGGATGATGTAAGGTTTCTTCTTCTTCTTGTTAATTTTGTTTAATTTTAGTCACAATATTCGTTTCTGTTTGTAAGATTCCAAAATTCTTTGTAGTCGAATTGTGTAATCTCTAGGATCGGTTAATTTGGTAGAAGAGATTAATGTGCGAGAAAAGACTTGGAGTATTGTTAGAACTTAAAATCGGCGGAACCTTTGTAGTTTGTAGTCATGAATGAGAGAGCTCCATTTTGAATCTAGTCACTTGCTCCTCCGAATTCCAGATGAAATGAATTTTATACTACACACATCCAAAGTATGTGTGTAGTATAAAATTCATTTATTGGATGGATAATCTAACCTTTGTAGTTTCCAGAATCTAGAACCGAGAAGCGAAAGTGCCCCCCTTTGGATGGATAATCCATTTATTGGGACAACGACAATGGCTTCGTAAATTGTTCTTCAATGATTGTATACATTTTTTCATTTAGAGGTTCTTCAATGGAAGAAATTTTTTAGCTAACTCAAACCTTGGTTAAATGTTATCAGTGTTAGTAACTTGAGTGAAACCATGGATGATTTTGTTGTTGTCACTTTTTCCCCGATATGTGCAATTATTCTCACATTCTCTTGCCGGGTTCTGCGCTACCAGTATCATTTGGGAAGAGGTCATATTGGGGCATCCATGAAAGCTAAACTATATCATTTATTGGAACAACGAGCAGCAGATTGGTAATTATCAAACATTTTATAATTCCCGGTTTGATTCATTTTCAGTATTTTGCCGTTCTAAGTTTAGTGCAATCTTGCAGCCGACACTTCGTCATTCCTTTGTGGCGTGGAAGTGGTTATACTACCATGTTTGTTCAAGGTTTGATCTTTAACTCGTGGCTTGAAGTTATATGTTTATATTAATTGAAAGAAAGGGTCCTTATCTGAAAGTTATATAATTTGATGCCGTTACTTAATCCCTTCATGTGTTTTCTTTTTCTCCCCCTCTCTTTGTTTAATAGAAATAGGAATAATATTTGAAGAAAAAATAAATACATAGAAATTAGAATACCATCAAGGGATTAATCAAAGGGTTATTCTACAGTCATCCATCGGTTTATTTTTTCTTCAAATAAACCTGATATATTTGAAACACCAAAGCTTGATGGTAAAGACCAAGCCTTGAAGAAACATGTGAATTACCATCAAGCTTTGGTGTTTCAAAGAAATCAGGTTTCTTCTACAATAATGAACTTCAGGTTGCTATGGGAGAGGGTCTTAAATCTGGATGAAACGATTTCGTGGTCTTATCTTTGCTTGCTGTAATTGTTTATAGTTTAGAAGTTTGAAGTCTTGCTTAATCAAAACAGTGCTGGAAAATTGTTGGTGAACGAGATCTTATGTATATTTGGGGTGTGGGATATAAAACATAGAATTTAGTCTTGCCAGCAATGCTTATAGTTCAAGTTAAATGCTTAACTCGGTTATATATGCAAATCATTTTGCAGTTCAAATGCCGTATATCCTTTTCACTGGCCTTGAAGATTACAAGGCAAGAGGAACTCAAGCAGCTCCCTACTTCACCGTGGCCTATTACAAAGAATTTTCAGAGAGCAAGGACTTAGTGCTTATTCGAGGTGATATTGTGTTTACAAGTAAGCTCACCGACCAGGAGGCAGAATGGCTTTTAGAGACCACACAATCCTTCTATCTGAACGATGCTCGGTACAAGCTGGTTGAACGGTTTAACAAACAAACACATGAATTTGAGTTCAAGGATGTCTTACAAGCACTGGAAATGCCCATTTTATGATTTCTGCGGAGCTTAGCAGGGAATAGTGCCTTCTTGAAGGTAATAATAAGAAATTTAGGAAAACATGACCAGCCTTTGTAAGGCTATCATTTATAGTTCCTCATAACTTTGCATAGGCTGTTTTGACCTTTAGAAAGAACCATCCTAGTTCATAAATTTGAGGACAACGTCATAAATTGAATCCCAAAATTTAATTTGTCTGATTGGGTGAAAATTGGATTATGATATCCATTTTTTCTTTTAAATTTAATTTATAATTTTTGAGT

mRNA sequence

TGTGATAAAAGTATTGTTTACCCGATTGATTTTTTAATTTCATTTCTCCGCGATGCGAAGCTCTTCGTTACGACCGTTGAGGACCATTGCTGGTTCTGCGAAATTTTTTCTCGCTAGTGCTTCGCCGGCGGTTCGACAATCTTCTCGTTCCTATTTTGCTAATGCGAGTCTTGAGAAACTGCAGAAGGAAGCTATTCCTTGTGATTTCCTCAAATGGTGTTCGATTGGTTTCTTTCGGACTTCAAGATTCGCTTCGGGGTTCGCCCCCTTGCAACAAAAGCCGTTGGATTCGATTATGGATATGGAGAGGGCGAAAGATCGGTCACCGGAGGACCTCGCTTCCATCTGGGATGATTATCATTTGGGAAGAGGTCATATTGGGGCATCCATGAAAGCTAAACTATATCATTTATTGGAACAACGAGCAGCAGATTGCCGACACTTCGTCATTCCTTTGTGGCGTGGAAGTGGTTATACTACCATGTTTGTTCAAGTTCAAATGCCGTATATCCTTTTCACTGGCCTTGAAGATTACAAGGCAAGAGGAACTCAAGCAGCTCCCTACTTCACCGTGGCCTATTACAAAGAATTTTCAGAGAGCAAGGACTTAGTGCTTATTCGAGGTGATATTGTGTTTACAAGTAAGCTCACCGACCAGGAGGCAGAATGGCTTTTAGAGACCACACAATCCTTCTATCTGAACGATGCTCGGTACAAGCTGGTTGAACGGTTTAACAAACAAACACATGAATTTGAGTTCAAGGATGTCTTACAAGCACTGGAAATGCCCATTTTATGATTTCTGCGGAGCTTAGCAGGGAATAGTGCCTTCTTGAAGGTAATAATAAGAAATTTAGGAAAACATGACCAGCCTTTGTAAGGCTATCATTTATAGTTCCTCATAACTTTGCATAGGCTGTTTTGACCTTTAGAAAGAACCATCCTAGTTCATAAATTTGAGGACAACGTCATAAATTGAATCCCAAAATTTAATTTGTCTGATTGGGTGAAAATTGGATTATGATATCCATTTTTTCTTTTAAATTTAATTTATAATTTTTGAGT

Coding sequence (CDS)

ATGCGAAGCTCTTCGTTACGACCGTTGAGGACCATTGCTGGTTCTGCGAAATTTTTTCTCGCTAGTGCTTCGCCGGCGGTTCGACAATCTTCTCGTTCCTATTTTGCTAATGCGAGTCTTGAGAAACTGCAGAAGGAAGCTATTCCTTGTGATTTCCTCAAATGGTGTTCGATTGGTTTCTTTCGGACTTCAAGATTCGCTTCGGGGTTCGCCCCCTTGCAACAAAAGCCGTTGGATTCGATTATGGATATGGAGAGGGCGAAAGATCGGTCACCGGAGGACCTCGCTTCCATCTGGGATGATTATCATTTGGGAAGAGGTCATATTGGGGCATCCATGAAAGCTAAACTATATCATTTATTGGAACAACGAGCAGCAGATTGCCGACACTTCGTCATTCCTTTGTGGCGTGGAAGTGGTTATACTACCATGTTTGTTCAAGTTCAAATGCCGTATATCCTTTTCACTGGCCTTGAAGATTACAAGGCAAGAGGAACTCAAGCAGCTCCCTACTTCACCGTGGCCTATTACAAAGAATTTTCAGAGAGCAAGGACTTAGTGCTTATTCGAGGTGATATTGTGTTTACAAGTAAGCTCACCGACCAGGAGGCAGAATGGCTTTTAGAGACCACACAATCCTTCTATCTGAACGATGCTCGGTACAAGCTGGTTGAACGGTTTAACAAACAAACACATGAATTTGAGTTCAAGGATGTCTTACAAGCACTGGAAATGCCCATTTTATGA

Protein sequence

MRSSSLRPLRTIAGSAKFFLASASPAVRQSSRSYFANASLEKLQKEAIPCDFLKWCSIGFFRTSRFASGFAPLQQKPLDSIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHLLEQRAADCRHFVIPLWRGSGYTTMFVQVQMPYILFTGLEDYKARGTQAAPYFTVAYYKEFSESKDLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDARYKLVERFNKQTHEFEFKDVLQALEMPIL
Homology
[Close]
BLAST of Carg15327 vs. NCBI nr
Match: XP_022925840.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Cucurbita moschata])

HSP 1 Score: 492.7 bits (1267), Expect = 7.5e-136
Identity = 244/248 (98.39%), Postives = 246/248 (99.19%), Query Frame = 0 

Query: 1   MRSSSLRPLRTIAGSAKFFLASASPAVRQSSRSYFANASLEKLQKEAIPCDFLKWCSIGF 60
           MRSSSLR LRTIAGSAKFFLASASPAVRQSSRSYFAN SLEKLQKEAIPCDFLKWCSIGF
Sbjct: 1   MRSSSLRTLRTIAGSAKFFLASASPAVRQSSRSYFANVSLEKLQKEAIPCDFLKWCSIGF 60

Query: 61  FRTSRFASGFAPLQQKPLDSIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHL 120
           FRTSRFASGFAPLQQKPLDSIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHL
Sbjct: 61  FRTSRFASGFAPLQQKPLDSIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHL 120

Query: 121 LEQRAADCRHFVIPLWRGSGYTTMFVQVQMPYILFTGLEDYKARGTQAAPYFTVAYYKEF 180
           LEQRAADCRHFVIPLWRGSGYTTMFVQVQMPYILFTGLEDYKARGTQAAPYFTVAYYKEF
Sbjct: 121 LEQRAADCRHFVIPLWRGSGYTTMFVQVQMPYILFTGLEDYKARGTQAAPYFTVAYYKEF 180

Query: 181 SESKDLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDARYKLVERFNKQTHEFEFKDVL 240
           +ESKDLVLIRGDIVFTSKLTD+EAEWLLETTQSFYLNDARYKLVERFNKQTHEFEFKDVL
Sbjct: 181 AESKDLVLIRGDIVFTSKLTDEEAEWLLETTQSFYLNDARYKLVERFNKQTHEFEFKDVL 240

Query: 241 QALEMPIL 249
           QALEMPIL
Sbjct: 241 QALEMPIL 248

[Close]
BLAST of Carg15327 vs. NCBI nr
Match: XP_023544293.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 485.7 bits (1249), Expect = 9.2e-134
Identity = 241/248 (97.18%), Postives = 243/248 (97.98%), Query Frame = 0 

Query: 1   MRSSSLRPLRTIAGSAKFFLASASPAVRQSSRSYFANASLEKLQKEAIPCDFLKWCSIGF 60
           MRSSSLR LRTIAGSAKFFLASA PAVRQSSRSYF N SLEKLQKEAIPCDFLKWCSIGF
Sbjct: 1   MRSSSLRTLRTIAGSAKFFLASALPAVRQSSRSYFVNVSLEKLQKEAIPCDFLKWCSIGF 60

Query: 61  FRTSRFASGFAPLQQKPLDSIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHL 120
           FRTSRFASGFAPLQQKPLDSIMDME+AKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHL
Sbjct: 61  FRTSRFASGFAPLQQKPLDSIMDMEKAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHL 120

Query: 121 LEQRAADCRHFVIPLWRGSGYTTMFVQVQMPYILFTGLEDYKARGTQAAPYFTVAYYKEF 180
           LEQRAADCRHFVIPLWRGSGYTTMFVQVQMPYILFTGLEDYKARGTQAAPYFTVAYYKEF
Sbjct: 121 LEQRAADCRHFVIPLWRGSGYTTMFVQVQMPYILFTGLEDYKARGTQAAPYFTVAYYKEF 180

Query: 181 SESKDLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDARYKLVERFNKQTHEFEFKDVL 240
           SESKDLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDARYKLVERFNKQT +FEFKDVL
Sbjct: 181 SESKDLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDARYKLVERFNKQTRDFEFKDVL 240

Query: 241 QALEMPIL 249
           QALEMPIL
Sbjct: 241 QALEMPIL 248

[Close]
BLAST of Carg15327 vs. NCBI nr
Match: XP_022978750.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Cucurbita maxima])

HSP 1 Score: 481.1 bits (1237), Expect = 2.3e-132
Identity = 239/248 (96.37%), Postives = 243/248 (97.98%), Query Frame = 0 

Query: 1   MRSSSLRPLRTIAGSAKFFLASASPAVRQSSRSYFANASLEKLQKEAIPCDFLKWCSIGF 60
           MRSSSLR LRTIAGSAK FLASASPAVRQSSRSYFAN SLEKLQKEAIPCDFLKWCSIGF
Sbjct: 1   MRSSSLRTLRTIAGSAKNFLASASPAVRQSSRSYFANVSLEKLQKEAIPCDFLKWCSIGF 60

Query: 61  FRTSRFASGFAPLQQKPLDSIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHL 120
           FRTSRFASGFAPLQQKPLDSIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHL
Sbjct: 61  FRTSRFASGFAPLQQKPLDSIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHL 120

Query: 121 LEQRAADCRHFVIPLWRGSGYTTMFVQVQMPYILFTGLEDYKARGTQAAPYFTVAYYKEF 180
           LEQRA+DCRHFVIPLWRGSGYTTMFVQVQMPYIL TGLEDYKARGTQAAPYFTVAYYKEF
Sbjct: 121 LEQRASDCRHFVIPLWRGSGYTTMFVQVQMPYILLTGLEDYKARGTQAAPYFTVAYYKEF 180

Query: 181 SESKDLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDARYKLVERFNKQTHEFEFKDVL 240
           +ESKDLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDARYKLVE+FNKQT +FEFKDVL
Sbjct: 181 AESKDLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDARYKLVEQFNKQTRDFEFKDVL 240

Query: 241 QALEMPIL 249
           QALEMPIL
Sbjct: 241 QALEMPIL 248

[Close]
BLAST of Carg15327 vs. NCBI nr
Match: XP_022142062.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Momordica charantia])

HSP 1 Score: 442.6 bits (1137), Expect = 8.9e-121
Identity = 219/252 (86.90%), Postives = 236/252 (93.65%), Query Frame = 0 

Query: 1   MRSSSLRPLRTIAGSAKFFLASASPAV---RQSSRSYFANASLEKLQ-KEAIPCDFLKWC 60
           MRSSS R LRTIAGSA+  LAS+SPAV    QSSR YFANASL+KLQ KEAIPCDF+KWC
Sbjct: 1   MRSSSFRTLRTIAGSARSLLASSSPAVPCLGQSSRCYFANASLQKLQKKEAIPCDFIKWC 60

Query: 61  SIGFFRTSRFASGFAPLQQKPLDSIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAK 120
           S+GFFRTS+FA+GF PLQ KPLDSI+DMERAKDRSPEDLASIWDDYHLGRGHIGASMKAK
Sbjct: 61  SLGFFRTSKFATGFTPLQPKPLDSIIDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAK 120

Query: 121 LYHLLEQRAADCRHFVIPLWRGSGYTTMFVQVQMPYILFTGLEDYKARGTQAAPYFTVAY 180
           LYHLLEQRA+DCR+FV+PLWRGSGYTTMF+QV MP+IL TGLEDYKARGTQAAPYFTV+Y
Sbjct: 121 LYHLLEQRASDCRYFVVPLWRGSGYTTMFIQVHMPHILITGLEDYKARGTQAAPYFTVSY 180

Query: 181 YKEFSESKDLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDARYKLVERFNKQTHEFEF 240
           YKEF+ESKDLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLND RYKLVERFN+QT +FEF
Sbjct: 181 YKEFAESKDLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDVRYKLVERFNRQTRDFEF 240

Query: 241 KDVLQALEMPIL 249
           KDVLQALEMPIL
Sbjct: 241 KDVLQALEMPIL 252

[Close]
BLAST of Carg15327 vs. NCBI nr
Match: XP_008439782.1 (PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1 [Cucumis melo])

HSP 1 Score: 439.1 bits (1128), Expect = 9.9e-120
Identity = 216/248 (87.10%), Postives = 231/248 (93.15%), Query Frame = 0 

Query: 1   MRSSSLRPLRTIAGSAKFFLASASPAVRQSSRSYFANASLEKLQKEAIPCDFLKWCSIGF 60
           MRSSSLR LRTIAGS K  LAS+SP VRQSSRSYFAN SL KLQKEA P DFLKW S+GF
Sbjct: 1   MRSSSLRTLRTIAGSVKTVLASSSPVVRQSSRSYFANLSLGKLQKEANPSDFLKWSSLGF 60

Query: 61  FRTSRFASGFAPLQQKPLDSIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHL 120
           FRTS+FA+GF PLQ KPL+SI+DMER KDRSPEDLASIWDDYHLGRGHIG SMKAKLYHL
Sbjct: 61  FRTSKFATGFTPLQPKPLNSIIDMERVKDRSPEDLASIWDDYHLGRGHIGISMKAKLYHL 120

Query: 121 LEQRAADCRHFVIPLWRGSGYTTMFVQVQMPYILFTGLEDYKARGTQAAPYFTVAYYKEF 180
           LE RAADCR+FVIPLWRGSGYTTMFVQVQMP+I+FTGLEDYKARGTQAAPYFTV+YYKEF
Sbjct: 121 LEHRAADCRYFVIPLWRGSGYTTMFVQVQMPHIIFTGLEDYKARGTQAAPYFTVSYYKEF 180

Query: 181 SESKDLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDARYKLVERFNKQTHEFEFKDVL 240
           +ESKDLVLIRGDIVFTSKLTD+EAEWLLETTQSFYLND RYKLVERFN+QT +FEFKDVL
Sbjct: 181 AESKDLVLIRGDIVFTSKLTDEEAEWLLETTQSFYLNDVRYKLVERFNRQTRDFEFKDVL 240

Query: 241 QALEMPIL 249
           QAL+MPIL
Sbjct: 241 QALDMPIL 248

[Close]
BLAST of Carg15327 vs. TAIR10
Match: AT2G34050.1 (INVOLVED IN: protein complex assembly)

HSP 1 Score: 333.2 bits (853), Expect = 1.4e-91
Identity = 163/249 (65.46%), Postives = 199/249 (79.92%), Query Frame = 0 

Query: 7   RPLRTIAGSAKFFLASASPAVRQSSRSYFANAS-------LEKLQKEAIPCDFLKWCSIG 66
           R + +I+  AK  L+S+S     SSR  F   S         KL + ++P + +KW S+G
Sbjct: 3   RIVGSISSLAKDKLSSSS---YSSSRQIFTARSSSWQRDASSKLSEASLPGNHIKWASLG 62

Query: 67  FFRTSRFASGFAPLQQKPLDSIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYH 126
             R SRFASGF PLQQKPLDSIMD+ RAK +SPE+L SIWDDYHLGRGHIG +MKA+LY 
Sbjct: 63  SVRNSRFASGFTPLQQKPLDSIMDLARAKTKSPEELTSIWDDYHLGRGHIGLTMKAQLYR 122

Query: 127 LLEQRAADCRHFVIPLWRGSGYTTMFVQVQMPYILFTGLEDYKARGTQAAPYFTVAYYKE 186
           LLEQRA++CR+FVIPLWRG+GY TMF QV+ P+++FTGLEDYKARGTQAAPY T  +Y E
Sbjct: 123 LLEQRASECRYFVIPLWRGNGYITMFAQVEAPHMIFTGLEDYKARGTQAAPYLTTTFYTE 182

Query: 187 FSESKDLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDARYKLVERFNKQTHEFEFKDV 246
            SE+KDLV IRGD+VFTSKLTD+EA+W++ET QSFYLND+RYKL+ERFNK TH+FEFKDV
Sbjct: 183 LSETKDLVFIRGDVVFTSKLTDEEAKWIMETAQSFYLNDSRYKLLERFNKHTHDFEFKDV 242

Query: 247 LQALEMPIL 249
           LQAL+MP+L
Sbjct: 243 LQALDMPLL 248

[Close]
BLAST of Carg15327 vs. Swiss-Prot
Match: sp|Q66JD1|ATPF1_XENTR (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Xenopus tropicalis OX=8364 GN=atpaf1 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.1e-16
Identity = 57/180 (31.67%), Postives = 91/180 (50.56%), Query Frame = 0 

Query: 67  ASGFAPLQQKPLDSIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHLLEQRAA 126
           ASG    + K LDSI+++E  KD+  +++  IW  Y   R  + A +  + + L+ +RA 
Sbjct: 104 ASGKGFSKNKTLDSILNIELIKDKDADEIREIWKQYFSLRNSVYAVIPGESFELIWRRAK 163

Query: 127 DCRHFVIPLWRGSGYTTMFVQVQMPYILFTGLEDYKARGTQAAPYFTVAYYKEFSESKDL 186
            C  F+  L R  GY     Q     + FT L + +  G  A     + +Y EF + K +
Sbjct: 164 TCPSFLYALPRKEGYEFFVGQWSGSELHFTALINIQTAGDAAPSQLILYHYPEFQKDKGI 223

Query: 187 VLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDA--RYKLVERFNKQTHEFEFKDVLQALE 245
           VL+  +I  T  L  Q+A+ L    Q FY +D    + LVE+FN ++ EF++  V+  LE
Sbjct: 224 VLMTSEI-DTKFLNVQDAQCLANQVQLFYGSDGAETFGLVEKFNHKSDEFKYMAVVSFLE 282

[Close]
BLAST of Carg15327 vs. Swiss-Prot
Match: sp|Q5TC12|ATPF1_HUMAN (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Homo sapiens OX=9606 GN=ATPAF1 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.0e-16
Identity = 54/173 (31.21%), Postives = 86/173 (49.71%), Query Frame = 0 

Query: 74  QQKPLDSIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHLLEQRAADCRHFVI 133
           + K L SI ++E  K+++ E++  IW  Y   +  + A + A+ + L+  RA  C  F+ 
Sbjct: 140 KDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLIWNRAQSCPTFLC 199

Query: 134 PLWRGSGYTTMFVQVQMPYILFTGLEDYKARGTQAAPYFTVAYYKEFSESKDLVLIRGDI 193
            L R  GY     Q     + FT L + + RG  AA    + +Y E  E K +VL+  ++
Sbjct: 200 ALPRREGYEFFVGQWTGTELHFTALINIQTRGEAAASQLILYHYPELKEEKGIVLMTAEM 259

Query: 194 VFTSKLTDQEAEWLLETTQSFYLNDAR--YKLVERFNKQTHEFEFKDVLQALE 245
             T  L   EA+ +    Q FY  D +  Y LVE FN + +EF++  V+  LE
Sbjct: 260 DSTF-LNVAEAQCIANQVQLFYATDRKETYGLVETFNLRPNEFKYMSVIAELE 311

[Close]
BLAST of Carg15327 vs. Swiss-Prot
Match: sp|Q811I0|ATPF1_MOUSE (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Mus musculus OX=10090 GN=Atpaf1 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 9.1e-16
Identity = 61/203 (30.05%), Postives = 97/203 (47.78%), Query Frame = 0 

Query: 44  QKEAIPCDFLKWCSIGFFRTSRFASGFAPLQQKPLDSIMDMERAKDRSPEDLASIWDDYH 103
           Q + I C   K  ++G    S+   GF   + K L S+ ++E  KD++ E++  IW  Y 
Sbjct: 111 QSDFIKCMEQKTDALGKQPVSK---GFT--KDKTLSSVFNVEMVKDKTAEEIKQIWQQYF 170

Query: 104 LGRGHIGASMKAKLYHLLEQRAADCRHFVIPLWRGSGYTTMFVQVQMPYILFTGLEDYKA 163
             +  + A +  + + L+  RA  C  F+  L R  GY     Q     + FT L + + 
Sbjct: 171 SAKDTVYAVIPKEKFDLIWNRAQSCPTFLCALPRRDGYEFFVGQWTGTELHFTALINIQT 230

Query: 164 RGTQAAPYFTVAYYKEFSESKDLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDAR--Y 223
           RG  AA    + +Y E  E K +VL+  ++  T  L   EA+ +    Q FY  D +  Y
Sbjct: 231 RGDAAASQLILYHYPELKEEKGIVLMTAEMDSTF-LNVVEAQCIANQVQLFYATDRKEIY 290

Query: 224 KLVERFNKQTHEFEFKDVLQALE 245
            LVE FN + +EF++  V+  LE
Sbjct: 291 GLVETFNFRPNEFKYMSVIAELE 307

[Close]
BLAST of Carg15327 vs. Swiss-Prot
Match: sp|P87127|ATP11_SCHPO (Protein atp11, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=atp11 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08
Identity = 46/181 (25.41%), Postives = 86/181 (47.51%), Query Frame = 0 

Query: 78  LDSIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHLLEQRAADCRHFVIPLWR 137
           L+  +D+E+ K+     +  +W   ++G   + A +  ++Y  +  RA    +FV+PL R
Sbjct: 106 LNRYIDVEKIKELPTSTIEKLWRARNIGDDILSACIPKEIYEKMLSRARMYPYFVLPLPR 165

Query: 138 G-SGYTTMFVQVQMP-----YILFTGLEDYKARGTQAAPYFTVAYYKEFSESKDLVLIRG 197
           G  G  + F+Q   P     ++L T L +YK +G+ AAP+  + ++ +    K + L+R 
Sbjct: 166 GDKGIESHFLQWNFPNKNEAHLLVTSLLEYKLKGSYAAPHTIMLHFADLLNLKGITLMRC 225

Query: 198 DIVFTSKLTDQEAEWLLETTQSFY-------LNDARYKLVERFNKQTHEFEFKDVLQALE 246
                 KL+  + + L+   Q FY       L   R  L+  F+K   +F+   V   ++
Sbjct: 226 QFE-PKKLSANDVQLLVLAIQKFYNASENTPLGKERLALLAAFSKGA-DFDLHKVATHMD 284

[Close]
BLAST of Carg15327 vs. TrEMBL
Match: tr|A0A1S3AZK5|A0A1S3AZK5_CUCME (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucumis melo OX=3656 GN=LOC103484474 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 6.5e-120
Identity = 216/248 (87.10%), Postives = 231/248 (93.15%), Query Frame = 0 

Query: 1   MRSSSLRPLRTIAGSAKFFLASASPAVRQSSRSYFANASLEKLQKEAIPCDFLKWCSIGF 60
           MRSSSLR LRTIAGS K  LAS+SP VRQSSRSYFAN SL KLQKEA P DFLKW S+GF
Sbjct: 1   MRSSSLRTLRTIAGSVKTVLASSSPVVRQSSRSYFANLSLGKLQKEANPSDFLKWSSLGF 60

Query: 61  FRTSRFASGFAPLQQKPLDSIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHL 120
           FRTS+FA+GF PLQ KPL+SI+DMER KDRSPEDLASIWDDYHLGRGHIG SMKAKLYHL
Sbjct: 61  FRTSKFATGFTPLQPKPLNSIIDMERVKDRSPEDLASIWDDYHLGRGHIGISMKAKLYHL 120

Query: 121 LEQRAADCRHFVIPLWRGSGYTTMFVQVQMPYILFTGLEDYKARGTQAAPYFTVAYYKEF 180
           LE RAADCR+FVIPLWRGSGYTTMFVQVQMP+I+FTGLEDYKARGTQAAPYFTV+YYKEF
Sbjct: 121 LEHRAADCRYFVIPLWRGSGYTTMFVQVQMPHIIFTGLEDYKARGTQAAPYFTVSYYKEF 180

Query: 181 SESKDLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDARYKLVERFNKQTHEFEFKDVL 240
           +ESKDLVLIRGDIVFTSKLTD+EAEWLLETTQSFYLND RYKLVERFN+QT +FEFKDVL
Sbjct: 181 AESKDLVLIRGDIVFTSKLTDEEAEWLLETTQSFYLNDVRYKLVERFNRQTRDFEFKDVL 240

Query: 241 QALEMPIL 249
           QAL+MPIL
Sbjct: 241 QALDMPIL 248

[Close]
BLAST of Carg15327 vs. TrEMBL
Match: tr|A0A0A0KI74|A0A0A0KI74_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518330 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 1.9e-119
Identity = 215/248 (86.69%), Postives = 231/248 (93.15%), Query Frame = 0 

Query: 1   MRSSSLRPLRTIAGSAKFFLASASPAVRQSSRSYFANASLEKLQKEAIPCDFLKWCSIGF 60
           MRSSSL+ LRTIAGS K  +AS+SP VRQSSRSYFAN SL KLQKE  P DFLKW S+GF
Sbjct: 1   MRSSSLQTLRTIAGSVKTVIASSSPVVRQSSRSYFANPSLGKLQKETNPSDFLKWSSLGF 60

Query: 61  FRTSRFASGFAPLQQKPLDSIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHL 120
           FRTS+FA+GF PLQ KPLDSI+DMERAKDRSPEDLASIWDDYHLGRGHIG SMKAKLYHL
Sbjct: 61  FRTSKFATGFNPLQPKPLDSIIDMERAKDRSPEDLASIWDDYHLGRGHIGISMKAKLYHL 120

Query: 121 LEQRAADCRHFVIPLWRGSGYTTMFVQVQMPYILFTGLEDYKARGTQAAPYFTVAYYKEF 180
           LEQRAADCR+FVIPLWRGSGYTTMFVQVQ P+I+FTGLEDYKARGTQAAPYFTV+YYKEF
Sbjct: 121 LEQRAADCRYFVIPLWRGSGYTTMFVQVQTPHIIFTGLEDYKARGTQAAPYFTVSYYKEF 180

Query: 181 SESKDLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDARYKLVERFNKQTHEFEFKDVL 240
           +ESKDLVLIRGDIVFTSKLTD+EAEWLLETTQSFYLND RYKLVERFN+QT +FEFKDVL
Sbjct: 181 AESKDLVLIRGDIVFTSKLTDEEAEWLLETTQSFYLNDVRYKLVERFNRQTRDFEFKDVL 240

Query: 241 QALEMPIL 249
           QAL+MPIL
Sbjct: 241 QALDMPIL 248

[Close]
BLAST of Carg15327 vs. TrEMBL
Match: tr|W9RFR7|W9RFR7_9ROSA (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Morus notabilis OX=981085 GN=L484_008865 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 4.0e-101
Identity = 183/244 (75.00%), Postives = 213/244 (87.30%), Query Frame = 0 

Query: 7   RPLRTIAGSAKFFLASASPAVRQSSRSYFANA--SLEKLQKEAIPCDFLKWCSIGFFRTS 66
           R  R +A SA   LA+AS A  + S +   +A   L+ + +++IP +F+KW S+GFFRTS
Sbjct: 3   RVSRIVASSASSLLANASAAAAKHSFTVTLSARQDLQHVAEKSIPGEFVKWGSLGFFRTS 62

Query: 67  RFASGFAPLQQKPLDSIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHLLEQR 126
           RFA+GF PLQ KPLDSIMD+ER KDRS ED+ASIWDDYHLGRGHIGASMKAKL+HLLEQR
Sbjct: 63  RFATGFTPLQPKPLDSIMDIERVKDRSAEDIASIWDDYHLGRGHIGASMKAKLFHLLEQR 122

Query: 127 AADCRHFVIPLWRGSGYTTMFVQVQMPYILFTGLEDYKARGTQAAPYFTVAYYKEFSESK 186
           AADCR+FVIPLWRGSGYTTMFVQVQMP++L TGLEDYKARGTQA+PYFT+AYYKEF+E+K
Sbjct: 123 AADCRYFVIPLWRGSGYTTMFVQVQMPHMLITGLEDYKARGTQASPYFTIAYYKEFAETK 182

Query: 187 DLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDARYKLVERFNKQTHEFEFKDVLQALE 246
           D+ LIRGD+VFTSKLTD EA+WLLET QSFYLNDARYKLVERFNK+T EFEFKDVL+ALE
Sbjct: 183 DIALIRGDVVFTSKLTDSEAKWLLETAQSFYLNDARYKLVERFNKETREFEFKDVLRALE 242

Query: 247 MPIL 249
           MP+L
Sbjct: 243 MPVL 246

[Close]
BLAST of Carg15327 vs. TrEMBL
Match: tr|A0A2P4IET2|A0A2P4IET2_QUESU (Isoform 3 of atp synthase mitochondrial f1 complex assembly factor 1 OS=Quercus suber OX=58331 GN=CFP56_72178 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.4e-98
Identity = 173/229 (75.55%), Postives = 206/229 (89.96%), Query Frame = 0 

Query: 20  LASASPAVRQSSRSYFANASLEKLQKEAIPCDFLKWCSIGFFRTSRFASGFAPLQQKPLD 79
           ++SA    + SS +  +  +L+KLQ+  IP DF++W S+GF R+S FA+GF+PLQ KPLD
Sbjct: 18  VSSAYVVPKHSSTALSSQPNLQKLQQGVIPGDFVRWGSLGFCRSSSFATGFSPLQHKPLD 77

Query: 80  SIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHLLEQRAADCRHFVIPLWRGS 139
           SIMD++R KDRSPED+AS WDDYHLGRGHIGA+MKAKLY+LLEQRAADCR+FVIPLWRGS
Sbjct: 78  SIMDIQRVKDRSPEDIASAWDDYHLGRGHIGAAMKAKLYYLLEQRAADCRYFVIPLWRGS 137

Query: 140 GYTTMFVQVQMPYILFTGLEDYKARGTQAAPYFTVAYYKEFSESKDLVLIRGDIVFTSKL 199
           GYTTMF QVQ+P+ILFTGLEDYKARGTQ+APYFTV+YY EF+ESKDLVLIRGD+VFTSK+
Sbjct: 138 GYTTMFAQVQIPHILFTGLEDYKARGTQSAPYFTVSYYNEFAESKDLVLIRGDVVFTSKI 197

Query: 200 TDQEAEWLLETTQSFYLNDARYKLVERFNKQTHEFEFKDVLQALEMPIL 249
           +D+EA+WLLETTQSFYLND RYKLVERFNK+TH FEFKD+LQAL+MPIL
Sbjct: 198 SDKEAKWLLETTQSFYLNDVRYKLVERFNKETHNFEFKDLLQALDMPIL 246

[Close]
BLAST of Carg15327 vs. TrEMBL
Match: tr|A0A2I4G3K4|A0A2I4G3K4_9ROSI (ATP synthase mitochondrial F1 complex assembly factor 1-like OS=Juglans regia OX=51240 GN=LOC109004412 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 2.4e-98
Identity = 173/221 (78.28%), Postives = 198/221 (89.59%), Query Frame = 0 

Query: 28  RQSSRSYFANASLEKLQKEAIPCDFLKWCSIGFFRTSRFASGFAPLQQKPLDSIMDMERA 87
           +Q SR+     +L KLQ+ A+P DF+KW S+GFFRTSRFA+GFAPLQ KPLDSIMD+ER 
Sbjct: 33  KQFSRALSLQPNLRKLQERAVPGDFVKWGSLGFFRTSRFATGFAPLQPKPLDSIMDIERV 92

Query: 88  KDRSPEDLASIWDDYHLGRGHIGASMKAKLYHLLEQRAADCRHFVIPLWRGSGYTTMFVQ 147
           KDRS ED+ASIWDDYHLGRGHIGASMKA LY LLEQRAADC++FVIPLWRGSGYTTMF Q
Sbjct: 93  KDRSAEDIASIWDDYHLGRGHIGASMKANLYFLLEQRAADCQYFVIPLWRGSGYTTMFAQ 152

Query: 148 VQMPYILFTGLEDYKARGTQAAPYFTVAYYKEFSESKDLVLIRGDIVFTSKLTDQEAEWL 207
           VQMP+I+FTGLEDYKARGTQA PYFTV+Y+KEF+ESKDLVL+RGD+V TSKL+D EA+WL
Sbjct: 153 VQMPHIIFTGLEDYKARGTQATPYFTVSYHKEFAESKDLVLVRGDVVLTSKLSDTEAQWL 212

Query: 208 LETTQSFYLNDARYKLVERFNKQTHEFEFKDVLQALEMPIL 249
           LET QSFYLND RYKLVERFNK+T +FEFKDVLQAL+MP +
Sbjct: 213 LETAQSFYLNDMRYKLVERFNKETRDFEFKDVLQALDMPTM 253

The following BLAST results are available for this feature:
BLAST of Carg15327 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022925840.17.5e-13698.39ATP synthase mitochondrial F1 complex assembly factor 1 [Cucurbita moschata][more]
XP_023544293.19.2e-13497.18ATP synthase mitochondrial F1 complex assembly factor 1 [Cucurbita pepo subsp. p... [more]
XP_022978750.12.3e-13296.37ATP synthase mitochondrial F1 complex assembly factor 1 [Cucurbita maxima][more]
XP_022142062.18.9e-12186.90ATP synthase mitochondrial F1 complex assembly factor 1 [Momordica charantia][more]
XP_008439782.19.9e-12087.10PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1 [Cucumis melo... [more]
BLAST of Carg15327 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G34050.11.4e-9165.46INVOLVED IN: protein complex assembly[more]
BLAST of Carg15327 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q66JD1|ATPF1_XENTR3.1e-1631.67ATP synthase mitochondrial F1 complex assembly factor 1 OS=Xenopus tropicalis OX... [more]
sp|Q5TC12|ATPF1_HUMAN7.0e-1631.21ATP synthase mitochondrial F1 complex assembly factor 1 OS=Homo sapiens OX=9606 ... [more]
sp|Q811I0|ATPF1_MOUSE9.1e-1630.05ATP synthase mitochondrial F1 complex assembly factor 1 OS=Mus musculus OX=10090... [more]
sp|P87127|ATP11_SCHPO1.1e-0825.41Protein atp11, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
BLAST of Carg15327 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AZK5|A0A1S3AZK5_CUCME6.5e-12087.10ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucumis melo OX=3656 ... [more]
tr|A0A0A0KI74|A0A0A0KI74_CUCSA1.9e-11986.69Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518330 PE=4 SV=1[more]
tr|W9RFR7|W9RFR7_9ROSA4.0e-10175.00ATP synthase mitochondrial F1 complex assembly factor 1 OS=Morus notabilis OX=98... [more]
tr|A0A2P4IET2|A0A2P4IET2_QUESU1.4e-9875.55Isoform 3 of atp synthase mitochondrial f1 complex assembly factor 1 OS=Quercus ... [more]
tr|A0A2I4G3K4|A0A2I4G3K4_9ROSI2.4e-9878.28ATP synthase mitochondrial F1 complex assembly factor 1-like OS=Juglans regia OX... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0065003macromolecular complex assembly
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: INTERPRO
TermDefinition
IPR010591ATP11
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0065003 macromolecular complex assembly
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg15327-RACarg15327-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010591ATP11PFAMPF06644ATP11coord: 71..239
e-value: 1.4E-38
score: 133.2
IPR010591ATP11PANTHERPTHR13126CHAPERONE ATP11coord: 61..247

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg15327Cla009665Watermelon (97103) v1carwmB0545
Carg15327Csa6G518330Cucumber (Chinese Long) v2carcuB0578
Carg15327MELO3C007238Melon (DHL92) v3.5.1carmeB0554
Carg15327ClCG01G023480Watermelon (Charleston Gray)carwcgB0531
Carg15327CSPI06G35110Wild cucumber (PI 183967)carcpiB0584
Carg15327Cucsa.046690Cucumber (Gy14) v1carcgyB0623
Carg15327CmoCh03G013050Cucurbita moschata (Rifu)carcmoB0742
Carg15327Lsi01G002680Bottle gourd (USVL1VR-Ls)carlsiB496
Carg15327CsGy6G034640Cucumber (Gy14) v2carcgybB0554
Carg15327MELO3C007238.2Melon (DHL92) v3.6.1carmedB0560
Carg15327CsaV3_6G050600Cucumber (Chinese Long) v3carcucB0585
Carg15327Cla97C01G023370Watermelon (97103) v2carwmbB0571
Carg15327Bhi03G000265Wax gourdcarwgoB0657
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg15327Silver-seed gourdcarcarB174
Carg15327Silver-seed gourdcarcarB507
Carg15327Silver-seed gourdcarcarB509
Carg15327Cucurbita maxima (Rimu)carcmaB0761
Carg15327Cucurbita maxima (Rimu)carcmaB0762
Carg15327Cucurbita maxima (Rimu)carcmaB0763
Carg15327Cucurbita maxima (Rimu)carcmaB0766
Carg15327Cucurbita moschata (Rifu)carcmoB0739
Carg15327Cucurbita moschata (Rifu)carcmoB0741
Carg15327Cucurbita moschata (Rifu)carcmoB0745
Carg15327Cucurbita pepo (Zucchini)carcpeB0771
Carg15327Cucurbita pepo (Zucchini)carcpeB0772
Carg15327Cucurbita pepo (Zucchini)carcpeB0773
Carg15327Bottle gourd (USVL1VR-Ls)carlsiB497
Carg15327Melon (DHL92) v3.5.1carmeB0551
Carg15327Melon (DHL92) v3.6.1carmedB0557
Carg15327Watermelon (Charleston Gray)carwcgB0532
Carg15327Watermelon (97103) v1carwmB0544
Carg15327Watermelon (97103) v2carwmbB0573
Carg15327Wax gourdcarwgoB0659