Carg15097 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15097
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Reticulon-like protein
Location	Cucurbita_argyrosperma_scaffold_078 : 529120 .. 530934 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCGCGTTCTCTACTCATACCTGGTCTCTCGTCTCTGCTTCGGAGACGATTCTTTCTCGCATTTCCATTTTCTGTTCTTCAATTTTGCCTGAAGGATCCATGGCTGACCAACCAGGCGGGCTGGATTCGGTTATTAACAAGATCTCCGGTAAGATCGACGGCTACAATTCTTCCTCTTCCTCCGGCTCTGATGATGGCCACCCTTCAAAAATCAATGCTGTAAAATCCCACGTTTTTAGGCTCTTCGGTAGAGATAAGCCCGTTCACACGGTCTTGGGCGGTGGAAAACGTACTCTCTGATCCTAATCTCTATCTCTGTCTTTATCGTGATTGATCGGTTAATGGAAGATTTTACGGATATATAAGTATTGGATCATGCTCTGTTTGTCATTCTTACCTATCAAATTCCTTTCTGTCTTTCTACAATGTTATAATCGAGATGTGCTTGCGCGAGTTCTTGCCATTTTTCGTTCGATTGGATGACTGTCCAATGTTTTTTGCCCTATTTTTTGAAGGAAACAATTTCATTGATTGAATGAAATGGTACTAAGTGAAAAACAAATCCAAACGGATCGCATAAACGATGACTGATAATAAATTTTCTTATGCATTTTCTAAAAGAAGAGTTGCTTCTTACATCAGAGATTGAGTGATTGTCCAATGTTAAAACGGAGAGTATTCTCTTTTTCTTTCAATCAAGTTATGGATGAAAACCTTAGGTTATTAGCGTTATGGCTTCATAATCTGTGCCAATGAGTATTGACATAGGCTCTTGACCAAGAGGTAGGAGGTTCCAATTTGTGACCTTGAGATTGGTGTGCTAAGAAAACAAATTTCTGTTGTTTTACCCCTCACCGGTTTGCTGTCTTTATCCGTGAGGGACCTTTTCTTATAAGTTATGGTTACTTCCGGTTGCAGCTGCTGATGTTCTTCTTTGGAGGAACAAGAAGAACTCTGCAGGCATCCTTGGGGGTGCCACTGCCTTGTGGATTCTTTTTGAGTTGCTTGAGTACCAATTAGTCACTCTCGTATGCCATATATTAATTCTTGTACTGGCTCTAGTTTTCACGCGGTCTTATGCCAGTTCGTTTATCAACAAGTAAGGACTTCGACTTGCAAAATCTAATGCAATAAATAGCCTGTTTCGCCCTTTTTTTTTTATATATATATATTTTTCGTGTTCTTTGTACAGGTCCCCACCGCAAATCCCAGATTTTAGACTTCCTGAAGATCGTCTACTCGAGGTTGTCTCTGCACTGAGAATCGAAATCAACCATGTAATCTCCAATTTACGTAACATTGCTTCTGGGAGAGATTTGAAGAAATTCCTCCGTGTACGTTCACTGTTACTATCTCCTGAGTAAAGGAAATATTTCTAGACTCGATCATCTATAGGAAACTTCATTTTTCATCAATTGGTTCATTTACTAATCTGGTAATGCTGCTGAGGATGTTTTATACCATTAACAGGCTTTTATTGGCTTATGGGTTCTATCAATGGTTGGAAGCTGGTGCAATTTTCTGACCTTGTTATACACATGTAAGGACTACTCTTTCAATCTTCGCTGAGAAATTACCAAATCGCCTGCATTTAGGTGCTTACATAATGATATATTGATGTGCTTATTGATGCTTGAAAAACAGCCGTTGTATTGCTACACACTGTGCCAGTGCTATATGAGAAGTATGATGACCAGGTTGACGCATTTGCTGAGAAGGCTTTGATAGAGGTCAAGAAGCAGTATGCTGTATTTAACGCCGAAGTTCTGAGTAAAATCCCGATGGGGGCACTCAAAGAGAAGAAGAAGGATTAG

mRNA sequence

TTTCGCGTTCTCTACTCATACCTGGTCTCTCGTCTCTGCTTCGGAGACGATTCTTTCTCGCATTTCCATTTTCTGTTCTTCAATTTTGCCTGAAGGATCCATGGCTGACCAACCAGGCGGGCTGGATTCGGTTATTAACAAGATCTCCGGTAAGATCGACGGCTACAATTCTTCCTCTTCCTCCGGCTCTGATGATGGCCACCCTTCAAAAATCAATGCTGTAAAATCCCACGTTTTTAGGCTCTTCGGTAGAGATAAGCCCGTTCACACGGTCTTGGGCGGTGGAAAACCTGCTGATGTTCTTCTTTGGAGGAACAAGAAGAACTCTGCAGGCATCCTTGGGGGTGCCACTGCCTTGTGGATTCTTTTTGAGTTGCTTGAGTACCAATTAGTCACTCTCGTATGCCATATATTAATTCTTGTACTGGCTCTAGTTTTCACGCGGTCTTATGCCAGTTCGTTTATCAACAAGTCCCCACCGCAAATCCCAGATTTTAGACTTCCTGAAGATCGTCTACTCGAGGTTGTCTCTGCACTGAGAATCGAAATCAACCATGTAATCTCCAATTTACGTAACATTGCTTCTGGGAGAGATTTGAAGAAATTCCTCCGTGCTTTTATTGGCTTATGGGTTCTATCAATGGTTGGAAGCTGGTGCAATTTTCTGACCTTGTTATACACATCCGTTGTATTGCTACACACTGTGCCAGTGCTATATGAGAAGTATGATGACCAGGTTGACGCATTTGCTGAGAAGGCTTTGATAGAGGTCAAGAAGCAGTATGCTGTATTTAACGCCGAAGTTCTGAGTAAAATCCCGATGGGGGCACTCAAAGAGAAGAAGAAGGATTAG

Coding sequence (CDS)

ATGGCTGACCAACCAGGCGGGCTGGATTCGGTTATTAACAAGATCTCCGGTAAGATCGACGGCTACAATTCTTCCTCTTCCTCCGGCTCTGATGATGGCCACCCTTCAAAAATCAATGCTGTAAAATCCCACGTTTTTAGGCTCTTCGGTAGAGATAAGCCCGTTCACACGGTCTTGGGCGGTGGAAAACCTGCTGATGTTCTTCTTTGGAGGAACAAGAAGAACTCTGCAGGCATCCTTGGGGGTGCCACTGCCTTGTGGATTCTTTTTGAGTTGCTTGAGTACCAATTAGTCACTCTCGTATGCCATATATTAATTCTTGTACTGGCTCTAGTTTTCACGCGGTCTTATGCCAGTTCGTTTATCAACAAGTCCCCACCGCAAATCCCAGATTTTAGACTTCCTGAAGATCGTCTACTCGAGGTTGTCTCTGCACTGAGAATCGAAATCAACCATGTAATCTCCAATTTACGTAACATTGCTTCTGGGAGAGATTTGAAGAAATTCCTCCGTGCTTTTATTGGCTTATGGGTTCTATCAATGGTTGGAAGCTGGTGCAATTTTCTGACCTTGTTATACACATCCGTTGTATTGCTACACACTGTGCCAGTGCTATATGAGAAGTATGATGACCAGGTTGACGCATTTGCTGAGAAGGCTTTGATAGAGGTCAAGAAGCAGTATGCTGTATTTAACGCCGAAGTTCTGAGTAAAATCCCGATGGGGGCACTCAAAGAGAAGAAGAAGGATTAG

Protein sequence

MADQPGGLDSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLGGGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLVTLVCHILILVLALVFTRSYASSFINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLSMVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIPMGALKEKKKD

Homology

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BLAST of Carg15097 vs. NCBI nr
Match: XP_022922933.1 (reticulon-like protein B1 [Cucurbita moschata] >XP_022922934.1 reticulon-like protein B1 [Cucurbita moschata] >XP_022922935.1 reticulon-like protein B1 [Cucurbita moschata])

HSP 1 Score: 483.0 bits (1242), Expect = 6.0e-133
Identity = 248/250 (99.20%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MADQPGGLDSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MADQPGGLDSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLG
Sbjct: 1   MADQPGGLDSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLG 60

Query: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLVTLVCHILILVLALVFTRSYASS 120
           GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQL+TLVCHILILVLALVFTRSYASS
Sbjct: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLVCHILILVLALVFTRSYASS 120

Query: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180
           FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS
Sbjct: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180

Query: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240
           MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVF+AEVLSKIP
Sbjct: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFSAEVLSKIP 240

Query: 241 MGALKEKKKD 251
           MGALKEKKKD
Sbjct: 241 MGALKEKKKD 250

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BLAST of Carg15097 vs. NCBI nr
Match: XP_023553084.1 (reticulon-like protein B1 [Cucurbita pepo subsp. pepo] >XP_023553085.1 reticulon-like protein B1 [Cucurbita pepo subsp. pepo] >XP_023553086.1 reticulon-like protein B1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 478.8 bits (1231), Expect = 1.1e-131
Identity = 245/250 (98.00%), Postives = 249/250 (99.60%), Query Frame = 0


Query: 1   MADQPGGLDSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MADQPGGLDSVI+KISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLG
Sbjct: 1   MADQPGGLDSVIDKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLG 60

Query: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLVTLVCHILILVLALVFTRSYASS 120
           GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQL+TLVCHILILVLALVFTRSYASS
Sbjct: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLVCHILILVLALVFTRSYASS 120

Query: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180
           FINKSPPQIPDFRLPEDRLLEVVSA+RI+INHVISNLRNIASGRDLKKFLRAFIGLWVLS
Sbjct: 121 FINKSPPQIPDFRLPEDRLLEVVSAMRIKINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180

Query: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240
           MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIE KKQYAVFNAEVLSKIP
Sbjct: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEFKKQYAVFNAEVLSKIP 240

Query: 241 MGALKEKKKD 251
           MGALKEKKKD
Sbjct: 241 MGALKEKKKD 250

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BLAST of Carg15097 vs. NCBI nr
Match: XP_022984754.1 (reticulon-like protein B1 [Cucurbita maxima])

HSP 1 Score: 472.6 bits (1215), Expect = 8.1e-130
Identity = 243/250 (97.20%), Postives = 247/250 (98.80%), Query Frame = 0


Query: 1   MADQPGGLDSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MADQPGGLDSV +KISGKIDGYNSSSSSGSDD  PSKINAVKSHVFRLFGRDKPVHTVLG
Sbjct: 1   MADQPGGLDSVTDKISGKIDGYNSSSSSGSDDDQPSKINAVKSHVFRLFGRDKPVHTVLG 60

Query: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLVTLVCHILILVLALVFTRSYASS 120
           GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQL+TL+CHILILVLALVFTRSYASS
Sbjct: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLITLLCHILILVLALVFTRSYASS 120

Query: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180
           FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS
Sbjct: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180

Query: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240
           MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP
Sbjct: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240

Query: 241 MGALKEKKKD 251
           MGAL+EKKKD
Sbjct: 241 MGALQEKKKD 250

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BLAST of Carg15097 vs. NCBI nr
Match: XP_004149448.1 (PREDICTED: reticulon-like protein B1 [Cucumis sativus] >XP_011651426.1 PREDICTED: reticulon-like protein B1 [Cucumis sativus] >KGN57883.1 hypothetical protein Csa_3G363160 [Cucumis sativus])

HSP 1 Score: 375.2 bits (962), Expect = 1.8e-100
Identity = 188/250 (75.20%), Postives = 218/250 (87.20%), Query Frame = 0


Query: 1   MADQPGGLDSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MADQP   DSVI+  S KID + SSSS      HPSK +AVK HV+RLFGRDKPVHTVLG
Sbjct: 1   MADQPAEPDSVIDNFSAKIDDHISSSSXXXXXDHPSKPDAVKCHVYRLFGRDKPVHTVLG 60

Query: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLVTLVCHILILVLALVFTRSYASS 120
           GGKPADV LW+NKKNSAG+LGGATALWILFELLEYQL+TLVCHILI++LA+ F  SYA++
Sbjct: 61  GGKPADVFLWKNKKNSAGVLGGATALWILFELLEYQLITLVCHILIILLAIPFLWSYANT 120

Query: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180
           FINK+PPQIPD RLPED LL+VV++LRIEIN +IS LR++ASGRDL+KFL AF+GLW+LS
Sbjct: 121 FINKTPPQIPDVRLPEDCLLQVVTSLRIEINRIISTLRDVASGRDLRKFLSAFLGLWILS 180

Query: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240
           + GSWCNFLTLLY   +LLHTVPVLYEKY+DQVD FAEKALIE+KKQYA F+A+VLSKIP
Sbjct: 181 IAGSWCNFLTLLYMCFILLHTVPVLYEKYEDQVDPFAEKALIELKKQYAEFDAKVLSKIP 240

Query: 241 MGALKEKKKD 251
           +G L+EKKKD
Sbjct: 241 LGPLQEKKKD 250

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BLAST of Carg15097 vs. NCBI nr
Match: XP_022945796.1 (reticulon-like protein B1 [Cucurbita moschata])

HSP 1 Score: 349.4 bits (895), Expect = 1.0e-92
Identity = 183/249 (73.49%), Postives = 205/249 (82.33%), Query Frame = 0


Query: 1   MADQPGGLDSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MADQP   DSVI+                SDDG  SKI+AVKS VFRLFGRDKPVHTVLG
Sbjct: 1   MADQPRERDSVIDXXXXXXXXXXXXXXXXSDDGLHSKIDAVKSRVFRLFGRDKPVHTVLG 60

Query: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLVTLVCHILILVLALVFTRSYASS 120
           GGKPADV LWRNKKNSAGILG ATALWI+FEL+EYQL+TLVCH+LIL+LA++F  SYA++
Sbjct: 61  GGKPADVFLWRNKKNSAGILGVATALWIVFELIEYQLITLVCHLLILLLAIMFLWSYANT 120

Query: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180
           FINK+PPQIPD +LPE   L+ VSALRIEIN  IS LR IA GRDLKKFL  F+GLWVLS
Sbjct: 121 FINKTPPQIPDMKLPEVCFLQFVSALRIEINRAISILRGIACGRDLKKFLSVFLGLWVLS 180

Query: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240
           +VGSWCNFLTLLY S+VLLHTVPV YEKY+DQVD  AEKA IE KKQYAVF+A+VLSKIP
Sbjct: 181 VVGSWCNFLTLLYISIVLLHTVPVFYEKYEDQVDPLAEKAWIEFKKQYAVFDAKVLSKIP 240

Query: 241 MGALKEKKK 250
           +GAL+EKKK
Sbjct: 241 IGALQEKKK 249

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BLAST of Carg15097 vs. TAIR10
Match: AT4G23630.1 (VIRB2-interacting protein 1)

HSP 1 Score: 274.6 bits (701), Expect = 5.9e-74
Identity = 133/209 (63.64%), Postives = 172/209 (82.30%), Query Frame = 0


Query: 42  KSHVFRLFGRDKPVHTVLGGGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLVTLV 101
           KS V+RLFGR++PVH VLGGGKPAD+ +W+NKK S G+LGGATA W++FEL+EY L+TL+
Sbjct: 67  KSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLL 126

Query: 102 CHILILVLALVFTRSYASSFINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIA 161
           CH++I+VLA++F  S A+ FINKSPP+IP+  +PE+ +L++ S LRIEIN   S+LR IA
Sbjct: 127 CHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIA 186

Query: 162 SGRDLKKFLRAFIGLWVLSMVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKAL 221
           SGRDLKKFL A  GLWVLS++G   NFLTL Y ++VLL TVP+ Y+KY+D+VD   EKA+
Sbjct: 187 SGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAM 246

Query: 222 IEVKKQYAVFNAEVLSKIPMGALKEKKKD 251
           IE+KKQYAV + +VLSKIP+G LK KKKD
Sbjct: 247 IELKKQYAVLDEKVLSKIPLGPLKNKKKD 275

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BLAST of Carg15097 vs. TAIR10
Match: AT4G11220.1 (VIRB2-interacting protein 2)

HSP 1 Score: 269.6 bits (688), Expect = 1.9e-72
Identity = 128/211 (60.66%), Postives = 173/211 (81.99%), Query Frame = 0


Query: 40  AVKSHVFRLFGRDKPVHTVLGGGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLVT 99
           ++KS V+RLFGR++PVH VLGGGKPAD+ +W++KK S G+ GGAT  W+LFEL+EY L+T
Sbjct: 61  SLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLT 120

Query: 100 LVCHILILVLALVFTRSYASSFINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRN 159
           L+CH++I+ LA++F  S A+ FI+KSPP+IP+  +PE+ LL++ S LRIEIN  IS+LR 
Sbjct: 121 LLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLRE 180

Query: 160 IASGRDLKKFLRAFIGLWVLSMVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEK 219
           IASGRD+KKFL A  GLWVLS++G   +FLTL Y ++VLL TVP+ Y+KY+D+VD++ EK
Sbjct: 181 IASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEK 240

Query: 220 ALIEVKKQYAVFNAEVLSKIPMGALKEKKKD 251
           A+ E+KKQYAV +A+V SKIP G LK+KKKD
Sbjct: 241 AMAELKKQYAVLDAKVFSKIPRGPLKDKKKD 271

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BLAST of Carg15097 vs. TAIR10
Match: AT2G46170.1 (Reticulon family protein)

HSP 1 Score: 256.5 bits (654), Expect = 1.7e-68
Identity = 131/241 (54.36%), Postives = 176/241 (73.03%), Query Frame = 0


Query: 9   DSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLGGGKPADVL 68
           +S++ KIS KI           +   P   +AVK+ ++R+FGR+KPVH VLGGGKPADV 
Sbjct: 13  ESLMEKISEKIHXXXXXXXXXXEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVF 72

Query: 69  LWRNKKNSAGILGGATALWILFELLEYQLVTLVCHILILVLALVFTRSYASSFINKSPPQ 128
           LWR+KK S  +LG ATA+W+LFEL+EY L++L+CHI IL L  +F  S A + INK+ PQ
Sbjct: 73  LWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQ 132

Query: 129 IPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLSMVGSWCNF 188
           IP+  +PE+  L V S+LR E+N     LR+IA GRDLKKFL   +GLW++S+VG+W NF
Sbjct: 133 IPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNF 192

Query: 189 LTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIPMGALKEKK 248
           LTL+Y   V+LHTVP+LYEK++D+VD  AEKA+ E++KQY VF+ +VLSKIP+ +LK K 
Sbjct: 193 LTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKAKA 252

Query: 249 K 250
           K
Sbjct: 253 K 253

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BLAST of Carg15097 vs. TAIR10
Match: AT5G41600.1 (VIRB2-interacting protein 3)

HSP 1 Score: 253.4 bits (646), Expect = 1.4e-67
Identity = 132/245 (53.88%), Postives = 168/245 (68.57%), Query Frame = 0


Query: 8   LDSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLGGGKPADV 67
           L+ ++ KI G                         S ++RLFGR+KPVH VLGGGKPAD+
Sbjct: 12  LEKIVEKIHGXXXXXXXXXXXXXXXXXXXXXXXXXSKIYRLFGREKPVHKVLGGGKPADI 71

Query: 68  LLWRNKKNSAGILGGATALWILFELLEYQLVTLVCHILILVLALVFTRSYASSFINKSPP 127
            LWRNKK S G+LG  TA W+LFEL EY L+  +CH  I  LA +F  S A +FI+KS P
Sbjct: 72  FLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTP 131

Query: 128 QIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLSMVGSWCN 187
            IP+  +PED +L++VS LRIEIN  ++ LRNIASG+D+KKF+    GLWVLS++GS  N
Sbjct: 132 HIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYN 191

Query: 188 FLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVL----SKIPMGA 247
           FLTL YT+ VLL T+PVLYEKY+D+VDA+ EKA+ E+KKQYAV + +VL    SKIP GA
Sbjct: 192 FLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPRGA 251

Query: 248 LKEKK 249
           L +KK
Sbjct: 252 LNKKK 256

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BLAST of Carg15097 vs. TAIR10
Match: AT1G64090.2 (Reticulan like protein B3)

HSP 1 Score: 242.3 bits (617), Expect = 3.2e-64
Identity = 140/271 (51.66%), Postives = 177/271 (65.31%), Query Frame = 0


Query: 1   MADQPGGLDSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MA++    +S++ KIS KI G+                  +K+ ++RLFGR++P+H + G
Sbjct: 1   MAEEHKHEESIMEKISEKIHGHXXXXXXXXXXXXXXXXXXLKTKIYRLFGREQPLHKLFG 60

Query: 61  GGK----------------PADVLLWRNKKNSAGILGGATALWILFELLEYQLVTLVCHI 120
           GGK                 AD+ LWRNKK S G+LG AT  WILFELLEY L+TL  HI
Sbjct: 61  GGKHSENQDINERFGLVFAAADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHI 120

Query: 121 LILVLALVFTRSYASSFINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGR 180
            IL LA++F  S AS+FI+KSP  IP+  +PED +L++ S LRIEIN   + LR+IASGR
Sbjct: 121 SILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGR 180

Query: 181 DLKKFLRAFIGLWVLSMVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEV 240
           DLKKFL    GLWVLS VGS CNFLTL+Y + VLL T+PVLYEKY+D+VD F EKA+ E+
Sbjct: 181 DLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREI 240

Query: 241 KKQYAVFNAEVL----SKIPMGALK-EKKKD 251
           KKQY  F+ +VL    SKIP GA    KKKD
Sbjct: 241 KKQYVEFDVKVLSKVMSKIPKGAFAFIKKKD 271

[Close]

BLAST of Carg15097 vs. Swiss-Prot
Match: sp|Q9SUR3|RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.1e-72
Identity = 133/209 (63.64%), Postives = 172/209 (82.30%), Query Frame = 0


Query: 42  KSHVFRLFGRDKPVHTVLGGGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLVTLV 101
           KS V+RLFGR++PVH VLGGGKPAD+ +W+NKK S G+LGGATA W++FEL+EY L+TL+
Sbjct: 67  KSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLL 126

Query: 102 CHILILVLALVFTRSYASSFINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIA 161
           CH++I+VLA++F  S A+ FINKSPP+IP+  +PE+ +L++ S LRIEIN   S+LR IA
Sbjct: 127 CHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIA 186

Query: 162 SGRDLKKFLRAFIGLWVLSMVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKAL 221
           SGRDLKKFL A  GLWVLS++G   NFLTL Y ++VLL TVP+ Y+KY+D+VD   EKA+
Sbjct: 187 SGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAM 246

Query: 222 IEVKKQYAVFNAEVLSKIPMGALKEKKKD 251
           IE+KKQYAV + +VLSKIP+G LK KKKD
Sbjct: 247 IELKKQYAVLDEKVLSKIPLGPLKNKKKD 275

[Close]

BLAST of Carg15097 vs. Swiss-Prot
Match: sp|Q9SUT9|RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.4e-71
Identity = 128/211 (60.66%), Postives = 173/211 (81.99%), Query Frame = 0


Query: 40  AVKSHVFRLFGRDKPVHTVLGGGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLVT 99
           ++KS V+RLFGR++PVH VLGGGKPAD+ +W++KK S G+ GGAT  W+LFEL+EY L+T
Sbjct: 61  SLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLT 120

Query: 100 LVCHILILVLALVFTRSYASSFINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRN 159
           L+CH++I+ LA++F  S A+ FI+KSPP+IP+  +PE+ LL++ S LRIEIN  IS+LR 
Sbjct: 121 LLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLRE 180

Query: 160 IASGRDLKKFLRAFIGLWVLSMVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEK 219
           IASGRD+KKFL A  GLWVLS++G   +FLTL Y ++VLL TVP+ Y+KY+D+VD++ EK
Sbjct: 181 IASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEK 240

Query: 220 ALIEVKKQYAVFNAEVLSKIPMGALKEKKKD 251
           A+ E+KKQYAV +A+V SKIP G LK+KKKD
Sbjct: 241 AMAELKKQYAVLDAKVFSKIPRGPLKDKKKD 271

[Close]

BLAST of Carg15097 vs. Swiss-Prot
Match: sp|O82352|RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 3.0e-67
Identity = 131/241 (54.36%), Postives = 176/241 (73.03%), Query Frame = 0


Query: 9   DSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLGGGKPADVL 68
           +S++ KIS KI           +   P   +AVK+ ++R+FGR+KPVH VLGGGKPADV 
Sbjct: 13  ESLMEKISEKIHXXXXXXXXXXEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVF 72

Query: 69  LWRNKKNSAGILGGATALWILFELLEYQLVTLVCHILILVLALVFTRSYASSFINKSPPQ 128
           LWR+KK S  +LG ATA+W+LFEL+EY L++L+CHI IL L  +F  S A + INK+ PQ
Sbjct: 73  LWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQ 132

Query: 129 IPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLSMVGSWCNF 188
           IP+  +PE+  L V S+LR E+N     LR+IA GRDLKKFL   +GLW++S+VG+W NF
Sbjct: 133 IPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNF 192

Query: 189 LTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIPMGALKEKK 248
           LTL+Y   V+LHTVP+LYEK++D+VD  AEKA+ E++KQY VF+ +VLSKIP+ +LK K 
Sbjct: 193 LTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKAKA 252

Query: 249 K 250
           K
Sbjct: 253 K 253

[Close]

BLAST of Carg15097 vs. Swiss-Prot
Match: sp|Q9SH59|RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 5.1e-67
Identity = 141/255 (55.29%), Postives = 178/255 (69.80%), Query Frame = 0


Query: 1   MADQPGGLDSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MA++    +S++ KIS KI G+                  +K+ ++RLFGR++P+H + G
Sbjct: 1   MAEEHKHEESIMEKISEKIHGHXXXXXXXXXXXXXXXXXXLKTKIYRLFGREQPLHKLFG 60

Query: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLVTLVCHILILVLALVFTRSYASS 120
           GGKPAD+ LWRNKK S G+LG AT  WILFELLEY L+TL  HI IL LA++F  S AS+
Sbjct: 61  GGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSAST 120

Query: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180
           FI+KSP  IP+  +PED +L++ S LRIEIN   + LR+IASGRDLKKFL    GLWVLS
Sbjct: 121 FIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLS 180

Query: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVL---- 240
            VGS CNFLTL+Y + VLL T+PVLYEKY+D+VD F EKA+ E+KKQY  F+ +VL    
Sbjct: 181 KVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVM 240

Query: 241 SKIPMGALK-EKKKD 251
           SKIP GA    KKKD
Sbjct: 241 SKIPKGAFAFIKKKD 255

[Close]

BLAST of Carg15097 vs. Swiss-Prot
Match: sp|Q9FFS0|RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 2.5e-66
Identity = 132/245 (53.88%), Postives = 168/245 (68.57%), Query Frame = 0


Query: 8   LDSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLGGGKPADV 67
           L+ ++ KI G                         S ++RLFGR+KPVH VLGGGKPAD+
Sbjct: 12  LEKIVEKIHGXXXXXXXXXXXXXXXXXXXXXXXXXSKIYRLFGREKPVHKVLGGGKPADI 71

Query: 68  LLWRNKKNSAGILGGATALWILFELLEYQLVTLVCHILILVLALVFTRSYASSFINKSPP 127
            LWRNKK S G+LG  TA W+LFEL EY L+  +CH  I  LA +F  S A +FI+KS P
Sbjct: 72  FLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTP 131

Query: 128 QIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLSMVGSWCN 187
            IP+  +PED +L++VS LRIEIN  ++ LRNIASG+D+KKF+    GLWVLS++GS  N
Sbjct: 132 HIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYN 191

Query: 188 FLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVL----SKIPMGA 247
           FLTL YT+ VLL T+PVLYEKY+D+VDA+ EKA+ E+KKQYAV + +VL    SKIP GA
Sbjct: 192 FLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPRGA 251

Query: 248 LKEKK 249
           L +KK
Sbjct: 252 LNKKK 256

[Close]

BLAST of Carg15097 vs. TrEMBL
Match: tr|A0A0A0L7V4|A0A0A0L7V4_CUCSA (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G363160 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.2e-100
Identity = 188/250 (75.20%), Postives = 218/250 (87.20%), Query Frame = 0


Query: 1   MADQPGGLDSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLG 60
           MADQP   DSVI+  S KID + SSSS      HPSK +AVK HV+RLFGRDKPVHTVLG
Sbjct: 1   MADQPAEPDSVIDNFSAKIDDHISSSSXXXXXDHPSKPDAVKCHVYRLFGRDKPVHTVLG 60

Query: 61  GGKPADVLLWRNKKNSAGILGGATALWILFELLEYQLVTLVCHILILVLALVFTRSYASS 120
           GGKPADV LW+NKKNSAG+LGGATALWILFELLEYQL+TLVCHILI++LA+ F  SYA++
Sbjct: 61  GGKPADVFLWKNKKNSAGVLGGATALWILFELLEYQLITLVCHILIILLAIPFLWSYANT 120

Query: 121 FINKSPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLS 180
           FINK+PPQIPD RLPED LL+VV++LRIEIN +IS LR++ASGRDL+KFL AF+GLW+LS
Sbjct: 121 FINKTPPQIPDVRLPEDCLLQVVTSLRIEINRIISTLRDVASGRDLRKFLSAFLGLWILS 180

Query: 181 MVGSWCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIP 240
           + GSWCNFLTLLY   +LLHTVPVLYEKY+DQVD FAEKALIE+KKQYA F+A+VLSKIP
Sbjct: 181 IAGSWCNFLTLLYMCFILLHTVPVLYEKYEDQVDPFAEKALIELKKQYAEFDAKVLSKIP 240

Query: 241 MGALKEKKKD 251
           +G L+EKKKD
Sbjct: 241 LGPLQEKKKD 250

[Close]

BLAST of Carg15097 vs. TrEMBL
Match: tr|A0A2P5CB09|A0A2P5CB09_PARAD (Reticulon-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_168380 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 2.8e-86
Identity = 166/242 (68.60%), Postives = 197/242 (81.40%), Query Frame = 0


Query: 9   DSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLGGGKPADVL 68
           +S++ KI+ KI G++S          PSK+ AV++ +FRLFGR+KPVH V GGGKPADV 
Sbjct: 7   ESLVEKIADKIHGHDSXXXXXXXXXXPSKVEAVQAKIFRLFGREKPVHKVFGGGKPADVF 66

Query: 69  LWRNKKNSAGILGGATALWILFELLEYQLVTLVCHILILVLALVFTRSYASSFINKSPPQ 128
           LWRNKK SAG+LGGATALW+LFELLEY L+TL CHILIL LALVF  S AS+FINKSPPQ
Sbjct: 67  LWRNKKLSAGVLGGATALWVLFELLEYHLITLFCHILILSLALVFLWSNASTFINKSPPQ 126

Query: 129 IPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLSMVGSWCNF 188
           IP+ R+PE  +LEV SALR EIN+ ++ LR+IASG++LKKFL   +GLWVLS+VG+WCNF
Sbjct: 127 IPEVRIPEKCVLEVASALRAEINYALAILRDIASGKELKKFLGVIVGLWVLSIVGNWCNF 186

Query: 189 LTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIPMGALKEKK 248
           LTL Y S VLLHTVPVLYEKY+D VD+FAEKA  E KKQY VF+A+VLSKIP G LKEKK
Sbjct: 187 LTLFYISFVLLHTVPVLYEKYEDHVDSFAEKATAEFKKQYVVFDAKVLSKIPKGPLKEKK 246

Query: 249 KD 251
           KD
Sbjct: 247 KD 248

[Close]

BLAST of Carg15097 vs. TrEMBL
Match: tr|A0A2P5FGP6|A0A2P5FGP6_9ROSA (Reticulon-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_073210 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 6.2e-86
Identity = 166/242 (68.60%), Postives = 196/242 (80.99%), Query Frame = 0


Query: 9   DSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLGGGKPADVL 68
           +S+I KI+ KI G++S          PSK+ AV++ +FRLFGR+KPVH V GGGKPADV 
Sbjct: 7   ESLIEKIADKIHGHDSXXXXXXXXXXPSKVEAVQAKIFRLFGREKPVHKVFGGGKPADVF 66

Query: 69  LWRNKKNSAGILGGATALWILFELLEYQLVTLVCHILILVLALVFTRSYASSFINKSPPQ 128
           LWRNKK SAG+LGGATALW+ FELLEY L+TL CHILIL LALVF  S AS+FINKSPPQ
Sbjct: 67  LWRNKKLSAGVLGGATALWVFFELLEYHLITLFCHILILSLALVFLWSNASTFINKSPPQ 126

Query: 129 IPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLSMVGSWCNF 188
           IP+ R+PE  +LEV SALR EIN+ ++ LR+IASG++LKKFL   +GLWVLS+VG+WCNF
Sbjct: 127 IPEVRIPEKCVLEVASALRAEINYALAILRDIASGKELKKFLGVIVGLWVLSIVGNWCNF 186

Query: 189 LTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIPMGALKEKK 248
           LTL Y S VLLHTVPVLYEKY+D VD+FAEKA  E KKQY VF+A+VLSKIP G LKEKK
Sbjct: 187 LTLFYISFVLLHTVPVLYEKYEDHVDSFAEKATAEFKKQYVVFDAKVLSKIPKGPLKEKK 246

Query: 249 KD 251
           KD
Sbjct: 247 KD 248

[Close]

BLAST of Carg15097 vs. TrEMBL
Match: tr|A9PAK3|A9PAK3_POPTR (Reticulon-like protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G097700v3 PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 5.3e-85
Identity = 167/244 (68.44%), Postives = 201/244 (82.38%), Query Frame = 0


Query: 8   LDSVINKISGKIDGYNSSSSSGSD-DGHPSKINAVKSHVFRLFGRDKPVHTVLGGGKPAD 67
           ++SV  KIS K  G++SSS S SD +   S  +++KS ++RLFGR+KPVH VLGGGKPAD
Sbjct: 11  VESVTEKISEKTHGHDSSSVSDSDHEKSKSNPDSLKSKIYRLFGREKPVHKVLGGGKPAD 70

Query: 68  VLLWRNKKNSAGILGGATALWILFELLEYQLVTLVCHILILVLALVFTRSYASSFINKSP 127
           V LWRNKK SAG+LGGATA+W+LFELLEY LVTLVCH LIL LAL+F  S AS+FINKSP
Sbjct: 71  VFLWRNKKISAGVLGGATAIWVLFELLEYNLVTLVCHCLILALALLFLWSNASTFINKSP 130

Query: 128 PQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLSMVGSWC 187
           P+IP+  +PE+ +L+  +ALRIEIN   S LR+IASGRDLK FL    GLWVLS+VGSWC
Sbjct: 131 PRIPEVCIPEEPVLQTAAALRIEINQGFSVLRDIASGRDLKNFLTVIAGLWVLSIVGSWC 190

Query: 188 NFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIPMGALKE 247
           NF+TL Y + VLLHTVPV YEKY+DQVDAFAEKA+IE+KKQYAVF+A+VLSKIP G LK+
Sbjct: 191 NFVTLFYIAFVLLHTVPVFYEKYEDQVDAFAEKAMIEIKKQYAVFDAKVLSKIPRGPLKD 250

Query: 248 KKKD 251
           KK+D
Sbjct: 251 KKRD 254

[Close]

BLAST of Carg15097 vs. TrEMBL
Match: tr|D7TV84|D7TV84_VITVI (Reticulon-like protein OS=Vitis vinifera OX=29760 GN=VIT_02s0025g00640 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.9e-82
Identity = 159/244 (65.16%), Postives = 198/244 (81.15%), Query Frame = 0


Query: 5   PGGLDSVINKISGKIDGYNSSSSSGSDDGHPSKINAVKSHVFRLFGRDKPVHTVLGGGKP 64
           P  ++S++ KIS KI G++SSSS    D   S  +A K+ V+R+FGR+KPVH VLGGGKP
Sbjct: 9   PSPVESMMEKISEKIHGHDSSSS--DSDNEKSSPSAFKAKVYRIFGREKPVHKVLGGGKP 68

Query: 65  ADVLLWRNKKNSAGILGGATALWILFELLEYQLVTLVCHILILVLALVFTRSYASSFINK 124
           ADV+LWRNKK SAG+LGGATA+WILFELLEY L+TLVCH  IL LA++F  S A++FINK
Sbjct: 69  ADVVLWRNKKISAGVLGGATAVWILFELLEYHLLTLVCHCSILALAILFLWSNATTFINK 128

Query: 125 SPPQIPDFRLPEDRLLEVVSALRIEINHVISNLRNIASGRDLKKFLRAFIGLWVLSMVGS 184
           +PP IP+  +PED +L+  SALRIEIN   + LRN+ASG+DLKKFL    GLWV+S+VGS
Sbjct: 129 APPHIPEVHIPEDPVLQFASALRIEINRGFTLLRNVASGKDLKKFLSVIAGLWVVSIVGS 188

Query: 185 WCNFLTLLYTSVVLLHTVPVLYEKYDDQVDAFAEKALIEVKKQYAVFNAEVLSKIPMGAL 244
           WCNFLTL Y   VLLHTVPVLYEKY+D VD+FAEKA++E+K+QYAVF+A+VLS+IP G L
Sbjct: 189 WCNFLTLFYIVFVLLHTVPVLYEKYEDPVDSFAEKAMVEIKRQYAVFDAKVLSRIPRGPL 248

Query: 245 KEKK 249
           K+KK
Sbjct: 249 KDKK 250

The following BLAST results are available for this feature:

BLAST of Carg15097 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922933.1	6.0e-133	99.20	reticulon-like protein B1 [Cucurbita moschata] >XP_022922934.1 reticulon-like pr...	[more]
XP_023553084.1	1.1e-131	98.00	reticulon-like protein B1 [Cucurbita pepo subsp. pepo] >XP_023553085.1 reticulon...	[more]
XP_022984754.1	8.1e-130	97.20	reticulon-like protein B1 [Cucurbita maxima]	[more]
XP_004149448.1	1.8e-100	75.20	PREDICTED: reticulon-like protein B1 [Cucumis sativus] >XP_011651426.1 PREDICTED...	[more]
XP_022945796.1	1.0e-92	73.49	reticulon-like protein B1 [Cucurbita moschata]	[more]

BLAST of Carg15097 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23630.1	5.9e-74	63.64	VIRB2-interacting protein 1	[more]
AT4G11220.1	1.9e-72	60.66	VIRB2-interacting protein 2	[more]
AT2G46170.1	1.7e-68	54.36	Reticulon family protein	[more]
AT5G41600.1	1.4e-67	53.88	VIRB2-interacting protein 3	[more]
AT1G64090.2	3.2e-64	51.66	Reticulan like protein B3	[more]

BLAST of Carg15097 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SUR3\|RTNLA_ARATH	1.1e-72	63.64	Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1	[more]
sp\|Q9SUT9\|RTNLB_ARATH	3.4e-71	60.66	Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1	[more]
sp\|O82352\|RTNLE_ARATH	3.0e-67	54.36	Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1	[more]
sp\|Q9SH59\|RTNLC_ARATH	5.1e-67	55.29	Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1	[more]
sp\|Q9FFS0\|RTNLD_ARATH	2.5e-66	53.88	Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1	[more]

BLAST of Carg15097 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L7V4\|A0A0A0L7V4_CUCSA	1.2e-100	75.20	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G363160 PE=4 SV=1	[more]
tr\|A0A2P5CB09\|A0A2P5CB09_PARAD	2.8e-86	68.60	Reticulon-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_168380 PE=...	[more]
tr\|A0A2P5FGP6\|A0A2P5FGP6_9ROSA	6.2e-86	68.60	Reticulon-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_073210 PE=4 SV...	[more]
tr\|A9PAK3\|A9PAK3_POPTR	5.3e-85	68.44	Reticulon-like protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G097700v3 PE=2...	[more]
tr\|D7TV84\|D7TV84_VITVI	1.9e-82	65.16	Reticulon-like protein OS=Vitis vinifera OX=29760 GN=VIT_02s0025g00640 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003388	Reticulon

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15097-RA	Carg15097-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 65..220 e-value: 5.6E-57 score: 192.0
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 64..250 score: 45.569
None	No IPR available	PANTHER	PTHR10994	RETICULON	coord: 9..250
None	No IPR available	PANTHER	PTHR10994:SF70	RETICULON-LIKE PROTEIN B1-RELATED	coord: 9..250

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15097	Cla004212	Watermelon (97103) v1	carwmB0990
Carg15097	Csa3G363160	Cucumber (Chinese Long) v2	carcuB1002
Carg15097	MELO3C006959	Melon (DHL92) v3.5.1	carmeB0966
Carg15097	ClCG05G008530	Watermelon (Charleston Gray)	carwcgB0965
Carg15097	ClCG05G001190	Watermelon (Charleston Gray)	carwcgB0964
Carg15097	CSPI03G22230	Wild cucumber (PI 183967)	carcpiB1025
Carg15097	Cucsa.012760	Cucumber (Gy14) v1	carcgyB1106
Carg15097	CmaCh18G012850	Cucurbita maxima (Rimu)	carcmaB1368
Carg15097	CmaCh16G000880	Cucurbita maxima (Rimu)	carcmaB1366
Carg15097	CmoCh18G013140	Cucurbita moschata (Rifu)	carcmoB1328
Carg15097	CmoCh16G000920	Cucurbita moschata (Rifu)	carcmoB1326
Carg15097	Lsi05G011770	Bottle gourd (USVL1VR-Ls)	carlsiB903
Carg15097	Cp4.1LG14g06360	Cucurbita pepo (Zucchini)	carcpeB1376
Carg15097	Cp4.1LG09g00590	Cucurbita pepo (Zucchini)	carcpeB1373
Carg15097	CsGy3G021110	Cucumber (Gy14) v2	carcgybB0977
Carg15097	MELO3C006959.2	Melon (DHL92) v3.6.1	carmedB0975
Carg15097	CsaV3_3G021710	Cucumber (Chinese Long) v3	carcucB1033
Carg15097	Cla97C05G081500	Watermelon (97103) v2	carwmbB1041
Carg15097	Cla97C05G090670	Watermelon (97103) v2	carwmbB1042
Carg15097	Bhi01G001045	Wax gourd	carwgoB1160

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15097	Carg20366	Silver-seed gourd	carcarB503

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15097	Cucumber (Gy14) v1	carcgyB1107
Carg15097	Cucumber (Gy14) v2	carcgybB0978
Carg15097	Cucurbita maxima (Rimu)	carcmaB1364
Carg15097	Cucurbita maxima (Rimu)	carcmaB1365
Carg15097	Cucurbita maxima (Rimu)	carcmaB1369
Carg15097	Cucurbita moschata (Rifu)	carcmoB1325
Carg15097	Cucurbita moschata (Rifu)	carcmoB1329
Carg15097	Cucurbita pepo (Zucchini)	carcpeB1375
Carg15097	Cucurbita pepo (Zucchini)	carcpeB1377
Carg15097	Wild cucumber (PI 183967)	carcpiB1029
Carg15097	Cucumber (Chinese Long) v2	carcuB1005
Carg15097	Cucumber (Chinese Long) v3	carcucB1035
Carg15097	Bottle gourd (USVL1VR-Ls)	carlsiB902
Carg15097	Melon (DHL92) v3.5.1	carmeB0962
Carg15097	Melon (DHL92) v3.6.1	carmedB0970
Carg15097	Watermelon (Charleston Gray)	carwcgB0963
Carg15097	Watermelon (97103) v1	carwmB0991
Carg15097	Watermelon (97103) v2	carwmbB1040