Carg14980 (gene) Silver-seed gourd

Overview
NameCarg14980
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionF-box protein SKIP19-like
LocationCucurbita_argyrosperma_scaffold_071 : 442213 .. 443627 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCGTGCCCCATCTCCGAACAGCCGGCGACGAACTGGCTTGATCTGCCCGATGACCTCATGATCACGATTCTGCTGAAGTTATGCGCCTTTGATATCCTCGTCAACGTGCAAAACGTCTGCTCGTCCTGGCGTAGGATCTGCAAGGACCCTTTCTTGTGGCGTGTCGTCGATATCCACTATATGGATAGTCGCGTGCAGTTGAGAACAGACCGCTTTGCGGAGATGATGTGCATGCAGGCTGTCAACCTTAGTTGTGGTCAATTGGTTGATATCAATATTGAGTCCTTCGGCACCGATGACTTGCTCCTCCATATCTCTCAGAGGTACGTTCTTATTCTCTACTCCCTCTTTTTTAGAATTGTTTTTCGCAATTTTGTCATACTCGTATCTGCCGGTAAGTTTTCGGCTCGTATTACGATTTGTTTCCGAGTACATACACTCAAAATATACAATGCCTTCATACATACAAGCTTAGATTCATTATTGTTTAAGGTGTTTTTGTTCTATGTAGCTAGTCTGAAACTTTTGGACCAAATTTGAATTTGAACCTCCGTTCATGTTATAGCTGTAGATGAATTGCATTTACATCGATAAGATAAATCTGAAGTTGTGAGAATAGTTCACATCTTTTGTGTCGTTTTGCCAAATTCGTAGCAGTTATGGATCCGAGATAATCTAAAGAATATCTATTATGTTCGATTCAACATATAATTCTAGGAAAGTGACAATTATTTCCTTGATTTTGTTTGAGGTTTGTATATGTAATTTGTTGCAGCTCAAAACGACTTAGAAGACTCCGGATAGTATGTTGCTCTGACATCTCTGCTGACGGAATCACTAAAGCAGCTTTGAAATTTCCATTGTTGCAACATCTTGAAATCTCTGGCTCTGCATATTGTTTGAAAACTTTGGCAACTGTTGGATGTTGTTGTCCTCGTCTGAAAACATTGAAGCTTAATTACAACAGAAGACGGTCTGAATTTGAACGGGATGAGGAAGCCTTGGCTATTGCTGAAAATATGCCTAATTTACGTAACCTTCAGATACGTGGCAACCTTCTAACTGAATGGGGCTTGCAGGCCATTCTTGATGGGTGTCCTCATTTAGAATATCTTGATTTACGCTGGTGTTACCATATAGGTTTTGCAGGACAGATGAACCTCTTACGTTCTGGAAAGATTAAAAGTTTCCGCTTGCCTGGTGAGTCCTTTGATGAGTCTGACAGTGTGAGCGAAACTTTTAGTTATGGTGGTGCCGATTCTGATGACAATTTCTCCGACGATTTCGACTCCGACACCGACTATTTCGACTCCAATGCCTGCCCTCCCTTTCCCACCCACTGTTGCAGGTTCATAAACGAAGCAGAGGAGCCTTGCAACTGCCATTTTGATTCTCTCTTCTGCAGGCAA

mRNA sequence

ATGGAGTCGTGCCCCATCTCCGAACAGCCGGCGACGAACTGGCTTGATCTGCCCGATGACCTCATGATCACGATTCTGCTGAAGTTATGCGCCTTTGATATCCTCGTCAACGTGCAAAACGTCTGCTCGTCCTGGCGTAGGATCTGCAAGGACCCTTTCTTGTGGCGTGTCGTCGATATCCACTATATGGATAGTCGCGTGCAGTTGAGAACAGACCGCTTTGCGGAGATGATGTGCATGCAGGCTGTCAACCTTAGTTGTGGTCAATTGGTTGATATCAATATTGAGTCCTTCGGCACCGATGACTTGCTCCTCCATATCTCTCAGAGCTCAAAACGACTTAGAAGACTCCGGATAGTATGTTGCTCTGACATCTCTGCTGACGGAATCACTAAAGCAGCTTTGAAATTTCCATTGTTGCAACATCTTGAAATCTCTGGCTCTGCATATTGTTTGAAAACTTTGGCAACTGTTGGATGTTGTTGTCCTCGTCTGAAAACATTGAAGCTTAATTACAACAGAAGACGGTCTGAATTTGAACGGGATGAGGAAGCCTTGGCTATTGCTGAAAATATGCCTAATTTACGTAACCTTCAGATACGTGGCAACCTTCTAACTGAATGGGGCTTGCAGGCCATTCTTGATGGGTGTCCTCATTTAGAATATCTTGATTTACGCTGGTGTTACCATATAGGTTTTGCAGGACAGATGAACCTCTTACGTTCTGGAAAGATTAAAAGTTTCCGCTTGCCTGGTGAGTCCTTTGATGAGTCTGACAGTGTGAGCGAAACTTTTAGTTATGGTGGTGCCGATTCTGATGACAATTTCTCCGACGATTTCGACTCCGACACCGACTATTTCGACTCCAATGCCTGCCCTCCCTTTCCCACCCACTGTTGCAGGTTCATAAACGAAGCAGAGGAGCCTTGCAACTGCCATTTTGATTCTCTCTTCTGCAGGCAA

Coding sequence (CDS)

ATGGAGTCGTGCCCCATCTCCGAACAGCCGGCGACGAACTGGCTTGATCTGCCCGATGACCTCATGATCACGATTCTGCTGAAGTTATGCGCCTTTGATATCCTCGTCAACGTGCAAAACGTCTGCTCGTCCTGGCGTAGGATCTGCAAGGACCCTTTCTTGTGGCGTGTCGTCGATATCCACTATATGGATAGTCGCGTGCAGTTGAGAACAGACCGCTTTGCGGAGATGATGTGCATGCAGGCTGTCAACCTTAGTTGTGGTCAATTGGTTGATATCAATATTGAGTCCTTCGGCACCGATGACTTGCTCCTCCATATCTCTCAGAGCTCAAAACGACTTAGAAGACTCCGGATAGTATGTTGCTCTGACATCTCTGCTGACGGAATCACTAAAGCAGCTTTGAAATTTCCATTGTTGCAACATCTTGAAATCTCTGGCTCTGCATATTGTTTGAAAACTTTGGCAACTGTTGGATGTTGTTGTCCTCGTCTGAAAACATTGAAGCTTAATTACAACAGAAGACGGTCTGAATTTGAACGGGATGAGGAAGCCTTGGCTATTGCTGAAAATATGCCTAATTTACGTAACCTTCAGATACGTGGCAACCTTCTAACTGAATGGGGCTTGCAGGCCATTCTTGATGGGTGTCCTCATTTAGAATATCTTGATTTACGCTGGTGTTACCATATAGGTTTTGCAGGACAGATGAACCTCTTACGTTCTGGAAAGATTAAAAGTTTCCGCTTGCCTGGTGAGTCCTTTGATGAGTCTGACAGTGTGAGCGAAACTTTTAGTTATGGTGGTGCCGATTCTGATGACAATTTCTCCGACGATTTCGACTCCGACACCGACTATTTCGACTCCAATGCCTGCCCTCCCTTTCCCACCCACTGTTGCAGGTTCATAAACGAAGCAGAGGAGCCTTGCAACTGCCATTTTGATTCTCTCTTCTGCAGGCAA

Protein sequence

MESCPISEQPATNWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDIHYMDSRVQLRTDRFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSKRLRRLRIVCCSDISADGITKAALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNRRRSEFERDEEALAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNLLRSGKIKSFRLPGESFDESDSVSETFSYGGADSDDNFSDDFDSDTDYFDSNACPPFPTHCCRFINEAEEPCNCHFDSLFCRQ
Homology
[Close]
BLAST of Carg14980 vs. NCBI nr
Match: XP_022926960.1 (putative F-box/LRR-repeat protein 9 [Cucurbita moschata])

HSP 1 Score: 649.8 bits (1675), Expect = 4.8e-183
Identity = 316/321 (98.44%), Postives = 317/321 (98.75%), Query Frame = 0 

Query: 1   MESCPISEQPATNWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDI 60
           MESCPISEQPATNWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDI
Sbjct: 1   MESCPISEQPATNWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDI 60

Query: 61  HYMDSRVQLRTDRFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSKRLRRLRIV 120
           HYMDSRVQLRTDRFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSKRLRRLRIV
Sbjct: 61  HYMDSRVQLRTDRFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSKRLRRLRIV 120

Query: 121 CCSDISADGITKAALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNRRRSEFE 180
           CCSDISADGITKAALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNRRRSEFE
Sbjct: 121 CCSDISADGITKAALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNRRRSEFE 180

Query: 181 RDEEALAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNLL 240
           RDEEALAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNLL
Sbjct: 181 RDEEALAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNLL 240

Query: 241 RSGKIKSFRLPGESFDESDSVSETFSYGGADSDDNFSDDFDSDTDYFDSNACPPFPTHCC 300
           RSGKIKSFRLPGESFDESDSVSETFSY G DSDDNFSDDFDSDT+YFDSNACPPFPTH C
Sbjct: 241 RSGKIKSFRLPGESFDESDSVSETFSYVGGDSDDNFSDDFDSDTNYFDSNACPPFPTH-C 300

Query: 301 RFINEAEEPCNCHFDSLFCRQ 322
           RFINEAEEP NCHFDSLFCRQ
Sbjct: 301 RFINEAEEPRNCHFDSLFCRQ 320

[Close]
BLAST of Carg14980 vs. NCBI nr
Match: XP_023003415.1 (F-box protein SKIP19-like [Cucurbita maxima])

HSP 1 Score: 644.4 bits (1661), Expect = 2.0e-181
Identity = 310/321 (96.57%), Postives = 312/321 (97.20%), Query Frame = 0 

Query: 1   MESCPISEQPATNWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDI 60
           MESCPISEQPATNWLDLPDDLM TILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDI
Sbjct: 1   MESCPISEQPATNWLDLPDDLMTTILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDI 60

Query: 61  HYMDSRVQLRTDRFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSKRLRRLRIV 120
           H+MDSRVQLRTDRFAEMMCMQAVNLSCGQLVDINIE FGTDDLLLHISQSSKRLRRLRIV
Sbjct: 61  HFMDSRVQLRTDRFAEMMCMQAVNLSCGQLVDINIEFFGTDDLLLHISQSSKRLRRLRIV 120

Query: 121 CCSDISADGITKAALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNRRRSEFE 180
           CCSDISADGITKAALKFP LQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNRRRSEFE
Sbjct: 121 CCSDISADGITKAALKFPSLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNRRRSEFE 180

Query: 181 RDEEALAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNLL 240
           RDEEALAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNLL
Sbjct: 181 RDEEALAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNLL 240

Query: 241 RSGKIKSFRLPGESFDESDSVSETFSYGGADSDDNFSDDFDSDTDYFDSNACPPFPTHCC 300
            SGKIKSFRLPGESFDESDSVSETFSY   DSDDNF DD+DSDTDYFDSNACPPFPTHCC
Sbjct: 241 CSGKIKSFRLPGESFDESDSVSETFSYVSGDSDDNFPDDWDSDTDYFDSNACPPFPTHCC 300

Query: 301 RFINEAEEPCNCHFDSLFCRQ 322
            FINEAEEPCNCHFDSLFCRQ
Sbjct: 301 SFINEAEEPCNCHFDSLFCRQ 321

[Close]
BLAST of Carg14980 vs. NCBI nr
Match: XP_023518530.1 (putative F-box/LRR-repeat protein 9 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 642.5 bits (1656), Expect = 7.6e-181
Identity = 312/321 (97.20%), Postives = 313/321 (97.51%), Query Frame = 0 

Query: 1   MESCPISEQPATNWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDI 60
           MESCPISEQPATNWLDLPDDLM TILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDI
Sbjct: 1   MESCPISEQPATNWLDLPDDLMTTILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDI 60

Query: 61  HYMDSRVQLRTDRFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSKRLRRLRIV 120
           HYMDSRVQLRTDRFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSS+RLRRLRIV
Sbjct: 61  HYMDSRVQLRTDRFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSRRLRRLRIV 120

Query: 121 CCSDISADGITKAALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNRRRSEFE 180
           CCSDISADGITKAALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNRRRSEFE
Sbjct: 121 CCSDISADGITKAALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNRRRSEFE 180

Query: 181 RDEEALAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNLL 240
           RDEEALAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFA QMNLL
Sbjct: 181 RDEEALAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAAQMNLL 240

Query: 241 RSGKIKSFRLPGESFDESDSVSETFSYGGADSDDNFSDDFDSDTDYFDSNACPPFPTHCC 300
           RSGKIKSF LPGESFDESDSVSETFSY G DSDDNFSDDFD DTDYFDSNACPPFPTH C
Sbjct: 241 RSGKIKSFNLPGESFDESDSVSETFSYVGGDSDDNFSDDFDPDTDYFDSNACPPFPTH-C 300

Query: 301 RFINEAEEPCNCHFDSLFCRQ 322
           RFINEAEEP NCHFDSLFCRQ
Sbjct: 301 RFINEAEEPRNCHFDSLFCRQ 320

[Close]
BLAST of Carg14980 vs. NCBI nr
Match: XP_022146630.1 (F-box protein SKIP19-like [Momordica charantia])

HSP 1 Score: 274.6 bits (701), Expect = 4.2e-70
Identity = 155/296 (52.36%), Postives = 203/296 (68.58%), Query Frame = 0 

Query: 1   MESCPISEQPATNWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDI 60
           MES PIS   A NWL+LP D+   ILLKL A +IL + Q+VCS WR+ICKDP +WRVVD+
Sbjct: 1   MESNPISGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDM 60

Query: 61  HYMDSRVQLRTDRFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSKRLRRLRIV 120
           H M    +   D   E MC+QAV+ SCG+L+DINI+ FGT++LL +I+QSS +LRRLRIV
Sbjct: 61  HNMG---EWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSSNQLRRLRIV 120

Query: 121 CCSDISADGITKAALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLN-YNRRRSEF 180
            C  I+  G+++A  K PLL+HLEIS  ++  KTL TVG CC  LK+LKL+  + RR   
Sbjct: 121 RCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMI 180

Query: 181 ERDEEALAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNL 240
           + D +A+AIAENMPNLR LQI G+ LT+ GLQAILDGCP LE LDLR C+++   GQ+ +
Sbjct: 181 DCDRDAIAIAENMPNLRYLQIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGV 240

Query: 241 LRSGKIKSFRLPGESFDESDSVSETFSYGGADSDD-----NFSD-DF-DSDTDYFD 289
             + +IK  RLP +  D+ + + ET  +G  DS D      FSD DF   D DY++
Sbjct: 241 ECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYE 293

[Close]
BLAST of Carg14980 vs. NCBI nr
Match: XP_022146724.1 (putative F-box/LRR-repeat protein 23 [Momordica charantia])

HSP 1 Score: 269.6 bits (688), Expect = 1.3e-68
Identity = 145/261 (55.56%), Postives = 181/261 (69.35%), Query Frame = 0 

Query: 3   SCPISEQPATNWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDIHY 62
           S P SE+PA NWL+LP D    IL+KL A DIL N Q VCS WR+IC DP +WRVVD+  
Sbjct: 5   SNPNSEEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRN 64

Query: 63  MDSRVQLRTDRFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSKRLRRLRIVCC 122
           +D  + +  D+  E MCMQAV+ SCGQLVDINIE FGTD+LL +I+QSS +LRRLR+V C
Sbjct: 65  LDDSLDM--DKDLEKMCMQAVDRSCGQLVDINIERFGTDELLHYIAQSSNQLRRLRLVYC 124

Query: 123 SDISADGITKAALKFPLLQHLEI--SGSAYCLKTLATVGCCCPRLKTLKLNYNRRRSE-- 182
            DIS  G+ +A  K PLL+ LEI  S  ++ ++TL TVG CCP L +LKL+    +    
Sbjct: 125 HDISGKGLAEAVPKLPLLEDLEIFFSFDSFDMETLKTVGRCCPLLNSLKLHNRNCKGPRL 184

Query: 183 FERDEEALAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMN 242
              DEEALAIAENMPNLR+L I  N LT+ GLQAILDGCP+LE LDLR C ++   GQ+ 
Sbjct: 185 MGCDEEALAIAENMPNLRHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLE 244

Query: 243 LLRSGKIKSFRLPGESFDESD 260
              S +IKS +LP +  D+ D
Sbjct: 245 KKCSKRIKSLQLPYDPIDDCD 263

[Close]
BLAST of Carg14980 vs. TAIR10
Match: AT4G05460.1 (RNI-like superfamily protein)

HSP 1 Score: 209.9 bits (533), Expect = 2.3e-54
Identity = 119/271 (43.91%), Postives = 166/271 (61.25%), Query Frame = 0 

Query: 11  ATNWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDIHYMDSRVQLR 70
           +TNW +LP +L   IL +L A +IL N Q VC SWRR+CKDP +WR +D+H +     + 
Sbjct: 16  STNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDM- 75

Query: 71  TDRFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSKRLRRLRIVCCSDISADGI 130
            D   E+MC  AV+ S G LVDI I  FGT DLL +I+  S  LR LR++ CS I+ DG 
Sbjct: 76  -DYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDGF 135

Query: 131 TKAALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNRRRSEFERDEEALAIAE 190
            +A +K P L+ LE+S  ++ +++L  VG CC  +KTLKLN   +  + E D++ALAIAE
Sbjct: 136 VEAVVKLP-LEELELSYCSFSVESLRVVGQCCLNMKTLKLN---KHPQKENDDDALAIAE 195

Query: 191 NMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNLLRSGKIKSFRL 250
            MP LR+LQ+ GN L++ GL AILD C +LE+LDLR C+++   G +       +K  R 
Sbjct: 196 TMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFESVKVVRH 255

Query: 251 PGESFDESD--SVSETFSYGGADSDDNFSDD 280
           P +S  + D  S  +   Y  +D D    DD
Sbjct: 256 PNDSIHDIDIGSSEDEDPYDFSDIDLMSGDD 280

[Close]
BLAST of Carg14980 vs. TAIR10
Match: AT4G05470.1 (RNI-like superfamily protein)

HSP 1 Score: 181.4 bits (459), Expect = 8.7e-46
Identity = 111/260 (42.69%), Postives = 149/260 (57.31%), Query Frame = 0 

Query: 13  NWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDIHYMDSRVQLRTD 72
           NW+DLP +L  +ILL+L   DIL N Q VC  WRRICKDP +WR +     ++R  L  +
Sbjct: 45  NWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKI-----NTRDCLMYN 104

Query: 73  RFAEMMCMQAVNLSCGQLVDINI-ESFGTDDLLLHISQSSKRLRRLRI-VCCSDISADGI 132
                MC   V+LS G L++IN+ E F +D LL +I  + + LR L + +C   ++  G+
Sbjct: 105 FDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYI--TDRNLRSLGLGMCFPRVTKLGV 164

Query: 133 TKAALKFPLLQHLEISGSAYCLK-TLATVGCCCPRLKTLKLNYNRR-------------- 192
             A  K PLL+ LE++ S  C+K  L  +G  CP+LKTLKLN   R              
Sbjct: 165 VNAIAKIPLLETLEVTHS--CIKLDLKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLD 224

Query: 193 -RSEFERDEEALAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFA 252
                E D++ALAIAE+MP L +LQ+  N LT  GL AILDGCPHLE+LD+R C+ I   
Sbjct: 225 DMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISLV 284

Query: 253 GQMNLLRSGKIKSFRLPGES 255
           G +       IK  R PG+S
Sbjct: 285 GNLEKRCLEMIKELRRPGDS 295

[Close]
BLAST of Carg14980 vs. TAIR10
Match: AT4G05490.1 (RNI-like superfamily protein)

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-45
Identity = 118/287 (41.11%), Postives = 165/287 (57.49%), Query Frame = 0 

Query: 8   EQPATNWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDIHYMDSRV 67
           E+  +NW +LP DL+ +ILL+L   +IL N + VC SWRR+ KDP +WR +D   M +  
Sbjct: 21  EEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRID---MRNLR 80

Query: 68  QLRTDRFAEMMCMQAVNLSCGQLVDINIES--FGTDDLLLHISQSSKRLRRLRIVCCSDI 127
           +L      E  C   V+LS G L++ NI+   F T  LL ++++ S  LRRLR V    I
Sbjct: 81  RLYCIYAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLR-VKGGQI 140

Query: 128 SADGITKAALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNRRRSEFERDEEA 187
           ++ GI +A +K PLL+ LE+   +   +   T+G  CP LKTLKL         E D +A
Sbjct: 141 TSVGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKL-VGFWSHLNESDNDA 200

Query: 188 LAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNLLRSGKI 247
           LAIA+ MP L +LQ+  N LT  GL AILDGCPHLE LDLR C++I   G +      +I
Sbjct: 201 LAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQCLERI 260

Query: 248 KSFRLPGESFDESDSVSETFSYGGA------DSDDNFSDDFDSDTDY 287
           K FR P +  D+ + V   FS  G+      + ++N+S   D DT+Y
Sbjct: 261 KDFRCPNDVLDDYNYV--IFSDNGSIEDEKGEEEENYSYGSD-DTEY 299

[Close]
BLAST of Carg14980 vs. TAIR10
Match: AT4G05475.1 (RNI-like superfamily protein)

HSP 1 Score: 180.3 bits (456), Expect = 1.9e-45
Identity = 109/254 (42.91%), Postives = 146/254 (57.48%), Query Frame = 0 

Query: 13  NWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDIHYMDSRVQLRTD 72
           NW+DLP +L  +ILL+L   DIL N + +C +WRRICKDP +WR +++     R  L  +
Sbjct: 39  NWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKINL-----RDCLMYE 98

Query: 73  RFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSKRLRRLRIVCCSDISADGITK 132
              E MC   V+LS G L++INIE F +D LL +I   S  L+ L I     ++  G+  
Sbjct: 99  FDFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPMTNKGVMN 158

Query: 133 AALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNRRRSE-----------FER 192
              K PLL+ L I  S+  L  L  +G  CP+LKTLKLN                   E 
Sbjct: 159 GIEKLPLLETLVIFHSSIKL-DLKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLEC 218

Query: 193 DEEALAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHL-EYLDLRWCYHIGFAGQMNLL 252
           D++ALAIAE+MP LR+LQ+ GN LT  GL AILDGCPHL E+LD+R C++I   G +   
Sbjct: 219 DDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNLEKR 278

Query: 253 RSGKIKSFRLPGES 255
              +IK  R P +S
Sbjct: 279 CMKRIKELRRPHDS 286

[Close]
BLAST of Carg14980 vs. TAIR10
Match: AT4G05497.1 (RNI-like superfamily protein)

HSP 1 Score: 179.9 bits (455), Expect = 2.5e-45
Identity = 100/227 (44.05%), Postives = 141/227 (62.11%), Query Frame = 0 

Query: 13  NWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDIHYMDSRV-QLRT 72
           NW +LP +L  +ILL+L A +IL N Q VC SWRR+C+DP +WR +DI   ++ V  +  
Sbjct: 20  NWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVEL 79

Query: 73  DRFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSKRLRRLRIVCCSDISADGIT 132
               E +C +AV+LS G L++INI+       L +I+  S  LRRL +V C+ + + G+ 
Sbjct: 80  FYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGVV 139

Query: 133 KAALKFPLLQHLEIS-GSAYCLKTLATVGCCCPRLKTLKLNYNRRRSEFERDEEALAIAE 192
           +AA+K PLL+ L+I+  S+   + L  VG  CP L+TLKLN          D+ ALAIAE
Sbjct: 140 EAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNCTGDVKCC--DKVALAIAE 199

Query: 193 NMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQM 238
            MP LR+LQ+  N L+E GL AIL+GCPHL+ L L  C +I   G +
Sbjct: 200 TMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNINIVGDI 244

[Close]
BLAST of Carg14980 vs. Swiss-Prot
Match: sp|Q9S9V9|FBL23_ARATH (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.1e-53
Identity = 111/251 (44.22%), Postives = 154/251 (61.35%), Query Frame = 0 

Query: 6   ISEQPATNWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDIHYMDS 65
           + ++   NW +LP  L  +ILL+L A +IL N Q VC  W R+CKDP +WR +DI   + 
Sbjct: 173 MKDKKLRNWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRND 232

Query: 66  RVQLRTDRFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSKRLRRLRIVCCSDI 125
           R   + D   E MC  AV+ S G L++I I  +GT+DL+++I+  S  L+ L +V C  I
Sbjct: 233 RAAFKYD--LESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPI 292

Query: 126 SADGITKAALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNY--NRRRSEFERDE 185
           + +G+ KA  K PLL++LE+S   +  ++L  +G  CP LKTLKLN       S    D+
Sbjct: 293 TDEGVAKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLNRAPEIMFSNSGFDD 352

Query: 186 EALAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNLLRSG 245
            A AIAE+MP LR+LQ+ GN LT  GL AILDGCPHLE+LDLR C++I   G +      
Sbjct: 353 NAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFE 412

Query: 246 KIKSFRLPGES 255
           +IK  R P +S
Sbjct: 413 RIKDLRCPNDS 421

[Close]
BLAST of Carg14980 vs. Swiss-Prot
Match: sp|Q9M0U9|SKI19_ARATH (F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 4.1e-53
Identity = 119/271 (43.91%), Postives = 166/271 (61.25%), Query Frame = 0 

Query: 11  ATNWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDIHYMDSRVQLR 70
           +TNW +LP +L   IL +L A +IL N Q VC SWRR+CKDP +WR +D+H +     + 
Sbjct: 16  STNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDM- 75

Query: 71  TDRFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSKRLRRLRIVCCSDISADGI 130
            D   E+MC  AV+ S G LVDI I  FGT DLL +I+  S  LR LR++ CS I+ DG 
Sbjct: 76  -DYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDGF 135

Query: 131 TKAALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNRRRSEFERDEEALAIAE 190
            +A +K P L+ LE+S  ++ +++L  VG CC  +KTLKLN   +  + E D++ALAIAE
Sbjct: 136 VEAVVKLP-LEELELSYCSFSVESLRVVGQCCLNMKTLKLN---KHPQKENDDDALAIAE 195

Query: 191 NMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNLLRSGKIKSFRL 250
            MP LR+LQ+ GN L++ GL AILD C +LE+LDLR C+++   G +       +K  R 
Sbjct: 196 TMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFESVKVVRH 255

Query: 251 PGESFDESD--SVSETFSYGGADSDDNFSDD 280
           P +S  + D  S  +   Y  +D D    DD
Sbjct: 256 PNDSIHDIDIGSSEDEDPYDFSDIDLMSGDD 280

[Close]
BLAST of Carg14980 vs. Swiss-Prot
Match: sp|Q9M0U8|FBL21_ARATH (Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana OX=3702 GN=FBL21 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.6e-44
Identity = 111/260 (42.69%), Postives = 149/260 (57.31%), Query Frame = 0 

Query: 13  NWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDIHYMDSRVQLRTD 72
           NW+DLP +L  +ILL+L   DIL N Q VC  WRRICKDP +WR +     ++R  L  +
Sbjct: 45  NWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKI-----NTRDCLMYN 104

Query: 73  RFAEMMCMQAVNLSCGQLVDINI-ESFGTDDLLLHISQSSKRLRRLRI-VCCSDISADGI 132
                MC   V+LS G L++IN+ E F +D LL +I  + + LR L + +C   ++  G+
Sbjct: 105 FDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYI--TDRNLRSLGLGMCFPRVTKLGV 164

Query: 133 TKAALKFPLLQHLEISGSAYCLK-TLATVGCCCPRLKTLKLNYNRR-------------- 192
             A  K PLL+ LE++ S  C+K  L  +G  CP+LKTLKLN   R              
Sbjct: 165 VNAIAKIPLLETLEVTHS--CIKLDLKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLD 224

Query: 193 -RSEFERDEEALAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFA 252
                E D++ALAIAE+MP L +LQ+  N LT  GL AILDGCPHLE+LD+R C+ I   
Sbjct: 225 DMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISLV 284

Query: 253 GQMNLLRSGKIKSFRLPGES 255
           G +       IK  R PG+S
Sbjct: 285 GNLEKRCLEMIKELRRPGDS 295

[Close]
BLAST of Carg14980 vs. Swiss-Prot
Match: sp|Q9M0U6|FBL22_ARATH (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.7e-44
Identity = 118/287 (41.11%), Postives = 165/287 (57.49%), Query Frame = 0 

Query: 8   EQPATNWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDIHYMDSRV 67
           E+  +NW +LP DL+ +ILL+L   +IL N + VC SWRR+ KDP +WR +D   M +  
Sbjct: 21  EEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRID---MRNLR 80

Query: 68  QLRTDRFAEMMCMQAVNLSCGQLVDINIES--FGTDDLLLHISQSSKRLRRLRIVCCSDI 127
           +L      E  C   V+LS G L++ NI+   F T  LL ++++ S  LRRLR V    I
Sbjct: 81  RLYCIYAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLR-VKGGQI 140

Query: 128 SADGITKAALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNRRRSEFERDEEA 187
           ++ GI +A +K PLL+ LE+   +   +   T+G  CP LKTLKL         E D +A
Sbjct: 141 TSVGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKL-VGFWSHLNESDNDA 200

Query: 188 LAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNLLRSGKI 247
           LAIA+ MP L +LQ+  N LT  GL AILDGCPHLE LDLR C++I   G +      +I
Sbjct: 201 LAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQCLERI 260

Query: 248 KSFRLPGESFDESDSVSETFSYGGA------DSDDNFSDDFDSDTDY 287
           K FR P +  D+ + V   FS  G+      + ++N+S   D DT+Y
Sbjct: 261 KDFRCPNDVLDDYNYV--IFSDNGSIEDEKGEEEENYSYGSD-DTEY 299

[Close]
BLAST of Carg14980 vs. Swiss-Prot
Match: sp|Q9M0U7|FB221_ARATH (Putative F-box protein At4g05475 OS=Arabidopsis thaliana OX=3702 GN=At4g05475 PE=4 SV=2)

HSP 1 Score: 180.3 bits (456), Expect = 3.5e-44
Identity = 109/254 (42.91%), Postives = 146/254 (57.48%), Query Frame = 0 

Query: 13  NWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDIHYMDSRVQLRTD 72
           NW+DLP +L  +ILL+L   DIL N + +C +WRRICKDP +WR +++     R  L  +
Sbjct: 39  NWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKINL-----RDCLMYE 98

Query: 73  RFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSKRLRRLRIVCCSDISADGITK 132
              E MC   V+LS G L++INIE F +D LL +I   S  L+ L I     ++  G+  
Sbjct: 99  FDFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPMTNKGVMN 158

Query: 133 AALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNRRRSE-----------FER 192
              K PLL+ L I  S+  L  L  +G  CP+LKTLKLN                   E 
Sbjct: 159 GIEKLPLLETLVIFHSSIKL-DLKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLEC 218

Query: 193 DEEALAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHL-EYLDLRWCYHIGFAGQMNLL 252
           D++ALAIAE+MP LR+LQ+ GN LT  GL AILDGCPHL E+LD+R C++I   G +   
Sbjct: 219 DDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNLEKR 278

Query: 253 RSGKIKSFRLPGES 255
              +IK  R P +S
Sbjct: 279 CMKRIKELRRPHDS 286

[Close]
BLAST of Carg14980 vs. TrEMBL
Match: tr|A0A061DXY4|A0A061DXY4_THECC (F-box/LRR-repeat protein 23, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_006073 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 3.0e-64
Identity = 140/298 (46.98%), Postives = 188/298 (63.09%), Query Frame = 0 

Query: 7   SEQPATNWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDIHYMDSR 66
           +E    NWL+LP D+  +IL +L AF+IL + QNVCS WR+ICKDP +WR +D+H +   
Sbjct: 322 AEGETRNWLELPLDVTASILSRLGAFEILKSAQNVCSQWRKICKDPLMWRSIDMHNLG-- 381

Query: 67  VQLRTDRFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSKRLRRLRIVCCSDIS 126
                DR  EMMC+ AV+ SCG L+DINIE FGTD+LLL+I++ S  L+RLR+V C +IS
Sbjct: 382 YIAAEDRVLEMMCVHAVDRSCGHLLDINIEYFGTDELLLNIAERSSHLKRLRLVSCYNIS 441

Query: 127 ADGITKAALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNR-RRSEFERDEEA 186
            +G++KAA K P L+ LEIS        L TVG C PRLK+ K N    RR   E D+EA
Sbjct: 442 DEGLSKAASKLPFLEELEISYCTISKDALETVGRCFPRLKSFKFNIRGCRRFRLESDDEA 501

Query: 187 LAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNLLRSGKI 246
           LAIA+ MP L +LQ+ GN LT+ GLQAIL+GCPHLE LDLR C+++   G +      ++
Sbjct: 502 LAIAQTMPELHHLQLFGNKLTDDGLQAILNGCPHLESLDLRQCFNVSLVGNLEKRCVERM 561

Query: 247 KSFRLPGESFDESDSVSETFSYGGADSD--------DNFSDDFDSDTDYFDSNACPPF 296
           K+ R P +S  + +  +E    G +D D        D  SDD+D   DYF+ +    F
Sbjct: 562 KNLRRPYDSTHDYEFDAEVHDTGSSDEDYPSGISDIDLMSDDYD---DYFEFSGASDF 614

[Close]
BLAST of Carg14980 vs. TrEMBL
Match: tr|A0A2N9GBS0|A0A2N9GBS0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24456 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.6e-62
Identity = 139/310 (44.84%), Postives = 197/310 (63.55%), Query Frame = 0 

Query: 1   MESCPISEQPATNWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDI 60
           MES   S +   NWL+LP D+  +IL +L A +IL++ Q+VC +W  +CK+P +WR +++
Sbjct: 1   MESPSSSSEQYRNWLELPRDVTASILQRLGAIEILMSAQHVCMTWYNLCKEPSMWRTIEM 60

Query: 61  HYMDSRVQLRTDRFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSKRLRRLRIV 120
           H +D    +  D   E MC  AV+ S GQLVDIN+E F +DDLL +I+ SS +LRR+R+V
Sbjct: 61  HNLDDLWIMPYD--PEKMCRNAVDRSSGQLVDINLEFFVSDDLLNYIALSSSQLRRVRLV 120

Query: 121 CCSDISADGITKAALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLN-YNRRRSEF 180
            C+ IS  G+++AA K PLL+ L++S  A+  +TL  VGCCCP LK+LKLN    RR   
Sbjct: 121 SCNSISDKGLSEAAAKLPLLEELDLSLCAFTKETLEVVGCCCPLLKSLKLNRRGYRRPHL 180

Query: 181 ERDEEALAIAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNL 240
             DEE LA+AENMP LR+LQ+ GN LT+WGL+AIL+GCPHLE LDLR C+++  +G +  
Sbjct: 181 HHDEEVLAVAENMPELRHLQLFGNTLTDWGLEAILNGCPHLESLDLRRCFNVDLSGNLER 240

Query: 241 LRSGKIKSFRLPGESFDESDSVSETFSYGGADSDDNFS-DDFDSDTDYFDSNACPPFPTH 300
              G IK+  LP ++ D+ +   E+   G  D       DDF    +Y +S+     P H
Sbjct: 241 RCEG-IKNLWLPYDAADDYELDPES-DIGSVDYHYTMDYDDFTVYHEYDESSGHSDSPRH 300

Query: 301 CCRFINEAEE 309
              +I + EE
Sbjct: 301 --GYIYDGEE 304

[Close]
BLAST of Carg14980 vs. TrEMBL
Match: tr|A0A0A0KIS9|A0A0A0KIS9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525300 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.6e-62
Identity = 141/283 (49.82%), Postives = 182/283 (64.31%), Query Frame = 0 

Query: 8   EQPATNWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDIHYMDSRV 67
           E  + NWL+LP D+   IL KL   +IL   Q VCSSWR+IC+DP +WRV+D+ Y     
Sbjct: 11  EGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCDWW 70

Query: 68  QLRTDRFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSKRLRRLRIVCCSDISA 127
            +  D   E +C QAV  SCGQL+  NIE FGTDDLLL+I+QS  +L RLR+V C+ IS 
Sbjct: 71  DM--DYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRLVYCNRISD 130

Query: 128 DGITKAALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNRRRSEFERDEEALA 187
           +G+ +A  K PLL+ LE+S  ++ ++TL T+G  CP LK+LKLN    R   E D+ ALA
Sbjct: 131 EGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYR-RVECDKGALA 190

Query: 188 IAENMPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNLLRSGKIKS 247
           IAENMPNLR+L I GN LT  GL+AILDGC  LE LDLR C+++  AGQ+    S KIK 
Sbjct: 191 IAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAKCSEKIKD 250

Query: 248 FRLPGESFDESDSVSETFSYGGADSDDNFSDDFD-----SDTD 286
            RLP +  D+ +  +E       D DD + DD+D     SDTD
Sbjct: 251 LRLPHDPTDDCEFTTEI-----VDDDDTYDDDYDYPFGLSDTD 285

[Close]
BLAST of Carg14980 vs. TrEMBL
Match: tr|A0A0D2NIS0|A0A0D2NIS0_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G267100 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 6.2e-62
Identity = 135/285 (47.37%), Postives = 180/285 (63.16%), Query Frame = 0 

Query: 13  NWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDIHYMDSRVQLRTD 72
           NWL+LP D+  +IL ++ A +IL + QNVCS WR ICKDP +WR +D+H +     +  D
Sbjct: 24  NWLELPLDVTASILSRIGAIEILNSAQNVCSLWRNICKDPLMWRSIDMHNLGDLWDMDYD 83

Query: 73  RFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSKRLRRLRIVCCSDISADGITK 132
                MC+ AV+ SCG L+DIN+E FGTD LLLHIS+ S  L+RLRIV C +IS +G+++
Sbjct: 84  --LAKMCVHAVDRSCGHLLDINVEYFGTDALLLHISERSVHLKRLRIVSCYNISDEGLSE 143

Query: 133 AALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNR-RRSEFERDEEALAIAEN 192
           AALK P L+ LEIS  +     L T+G  CP LK+ K N    RR   E D+EALAIA+ 
Sbjct: 144 AALKLPFLEELEISYCSISKDALETIGRSCPLLKSFKFNVQGCRRFHLESDDEALAIAQT 203

Query: 193 MPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNLLRSGKIKSFRLP 252
           MP LR+LQ+ GN LT  GL AIL+GCPHLEYLDLR C+++   G +      +IK+ R P
Sbjct: 204 MPELRHLQLFGNKLTNDGLLAILNGCPHLEYLDLRQCFNVSLGGNLEKRCVERIKNLRRP 263

Query: 253 GESFDESDSVSETFSYGGADSD--------DNFSDDFDSDTDYFD 289
            +S  + +  +E    G +D D        D  SDD+D   DYF+
Sbjct: 264 NDSTHDYEFYTEVHDTGSSDEDYPSGISDIDFMSDDYD---DYFE 303

[Close]
BLAST of Carg14980 vs. TrEMBL
Match: tr|A0A1U8JR62|A0A1U8JR62_GOSHI (F-box protein SKIP19-like OS=Gossypium hirsutum OX=3635 GN=LOC107908549 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.4e-61
Identity = 135/285 (47.37%), Postives = 180/285 (63.16%), Query Frame = 0 

Query: 13  NWLDLPDDLMITILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDIHYMDSRVQLRTD 72
           NWL+LP D+  +IL ++ A +IL + QNVCS WR ICKDP +WR +D+H +     +  D
Sbjct: 9   NWLELPLDVTASILSRIGAIEILNSAQNVCSLWRNICKDPLMWRSIDMHNLGDLWDMDYD 68

Query: 73  RFAEMMCMQAVNLSCGQLVDINIESFGTDDLLLHISQSSKRLRRLRIVCCSDISADGITK 132
                MC+ AV+ SCG L+DIN+E FGTD LLLHIS+ S  L+RLRIV C +IS +G+++
Sbjct: 69  --LAKMCVHAVDRSCGHLLDINVEYFGTDALLLHISERSVHLKRLRIVSCYNISDEGLSE 128

Query: 133 AALKFPLLQHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNR-RRSEFERDEEALAIAEN 192
           AALK P L+ LEIS  +     L T+G  CP LK+ K N    RR   E D+EALAIA+ 
Sbjct: 129 AALKLPFLEELEISYCSISKDALETIGRSCPLLKSFKFNVQGCRRFHLESDDEALAIAQT 188

Query: 193 MPNLRNLQIRGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNLLRSGKIKSFRLP 252
           MP LR+LQ+ GN LT  GL AIL+GCPHLEYLDLR C+++   G +      +IK+ R P
Sbjct: 189 MPELRHLQLFGNKLTNDGLLAILNGCPHLEYLDLRQCFNVSLGGNLEKRCVERIKNLRRP 248

Query: 253 GESFDESDSVSETFSYGGADSD--------DNFSDDFDSDTDYFD 289
            +S  + +  +E    G +D D        D  SDD+D   DYF+
Sbjct: 249 NDSTLDYEFYTEVHDTGSSDEDYPSGISDIDFMSDDYD---DYFE 288

The following BLAST results are available for this feature:
BLAST of Carg14980 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022926960.14.8e-18398.44putative F-box/LRR-repeat protein 9 [Cucurbita moschata][more]
XP_023003415.12.0e-18196.57F-box protein SKIP19-like [Cucurbita maxima][more]
XP_023518530.17.6e-18197.20putative F-box/LRR-repeat protein 9 [Cucurbita pepo subsp. pepo][more]
XP_022146630.14.2e-7052.36F-box protein SKIP19-like [Momordica charantia][more]
XP_022146724.11.3e-6855.56putative F-box/LRR-repeat protein 23 [Momordica charantia][more]
BLAST of Carg14980 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G05460.12.3e-5443.91RNI-like superfamily protein[more]
AT4G05470.18.7e-4642.69RNI-like superfamily protein[more]
AT4G05490.11.5e-4541.11RNI-like superfamily protein[more]
AT4G05475.11.9e-4542.91RNI-like superfamily protein[more]
AT4G05497.12.5e-4544.05RNI-like superfamily protein[more]
BLAST of Carg14980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9S9V9|FBL23_ARATH1.1e-5344.22Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE... [more]
sp|Q9M0U9|SKI19_ARATH4.1e-5343.91F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1[more]
sp|Q9M0U8|FBL21_ARATH1.6e-4442.69Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana OX=3702 GN=FBL21 PE... [more]
sp|Q9M0U6|FBL22_ARATH2.7e-4441.11Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE... [more]
sp|Q9M0U7|FB221_ARATH3.5e-4442.91Putative F-box protein At4g05475 OS=Arabidopsis thaliana OX=3702 GN=At4g05475 PE... [more]
BLAST of Carg14980 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A061DXY4|A0A061DXY4_THECC3.0e-6446.98F-box/LRR-repeat protein 23, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TC... [more]
tr|A0A2N9GBS0|A0A2N9GBS0_FAGSY3.6e-6244.84Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24456 PE=4 SV=1[more]
tr|A0A0A0KIS9|A0A0A0KIS9_CUCSA3.6e-6249.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525300 PE=4 SV=1[more]
tr|A0A0D2NIS0|A0A0D2NIS0_GOSRA6.2e-6247.37Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G267100 PE=4 ... [more]
tr|A0A1U8JR62|A0A1U8JR62_GOSHI1.4e-6147.37F-box protein SKIP19-like OS=Gossypium hirsutum OX=3635 GN=LOC107908549 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf
IPR001810F-box_dom
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR006553Leu-rich_rpt_Cys-con_subtyp
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006281 DNA repair
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14980-RACarg14980-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 217..242
e-value: 0.13
score: 21.4
coord: 111..136
e-value: 180.0
score: 4.8
coord: 87..110
e-value: 220.0
score: 4.1
coord: 192..216
e-value: 180.0
score: 4.8
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 7..59
e-value: 2.7E-12
score: 48.5
NoneNo IPR availablePANTHERPTHR44078FAMILY NOT NAMEDcoord: 7..276
NoneNo IPR availablePANTHERPTHR44078:SF5F-BOX PROTEIN SKIP19-RELATEDcoord: 7..276
NoneNo IPR availableSUPERFAMILYSSF52047RNI-likecoord: 80..251
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 217..228
e-value: 0.69
score: 10.0
IPR032675Leucine-rich repeat domain superfamilyGENE3DG3DSA:3.80.10.10coord: 66..252
e-value: 1.7E-25
score: 91.2
IPR001810F-box domainPFAMPF12937F-box-likecoord: 14..60
e-value: 1.0E-8
score: 34.8
IPR001810F-box domainPROSITEPS50181FBOXcoord: 11..58
score: 10.478
IPR036047F-box-like domain superfamilySUPERFAMILYSSF81383F-box domaincoord: 8..66