Carg14951 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg14951
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Coatomer epsilon subunit
Location	Cucurbita_argyrosperma_scaffold_071 : 267505 .. 270704 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTTTTTATTTTGTTTACTTTTACTCGTTGATTTTCCCAAATTTGTTCAATTGCTTAGTCGGTCTTCTCTCTGTATCCCTCAAGGCTGCTAGATTCAGATCTAGGAGGAGCTTGGACGAAGAAGGAAGAGTGAAAGCATGGCAGCACCGGATCATTTGTTCAATCTCAGAAATCATTTCTATTTGGGAGCGTATCAGGCCGCCATTAACAACAGTAATCTCCCCAATCTCTCCCCCGATGATGCAATTGAGAGGGATTCCATTGTTTACCGCTCTTACATTGCCCTTGGCAGCTATCAGGTCTGTTCGTGCACATTAGTGTGGTTGTAAAGTATATTGGTGATTGCTTTCAACTTGATTTGATACTCTGTGCGTACTCTTTCAGCTAGTGGTTAGCGAGATCGACTCATCCGCCCCTACGCCTCTCCAAGCCGTCAAATTGCTCGCTCTGTATCTGTCTGATCCCAGCAGCAAGGTTTCATTCGTGGATCTATATCCTTTTTAGCTGATTATGTTCGTTTGGAATATAAATTCTTTCTGGAATTCATAGAATTTCAATTATAATTTTGGGTCACACATCTCTATGCCGTGTTACTTCATTCTATAAATTTAAACCATATTTGACATTGATCTGGGGTGACATGCTAAAAGTCTCAAGAAGCGTTTACTGGGAATTCAATGTTGGTGACTCCATTTTATTGGCTAGTGACGTTTGGTGCCTTTTCTTTTGGGGGGTGCGGATGAATGAGGATAGGGAGCCAATTCATATTGTGGCAATGAACGGAGTTTTTAGCGTTTCATAATGAAAATTCCTGCATAGTTGGATCGATATTAAAAGTCATCTAACGTGTGAATATGTTAAGCAGTTCGAACCAACTTAAAAGATTTCAGATTTGACACCTAGTATTGAACGATAATTCACTTTCAAAAAGGAATGAATCCGGTTTCTTGTTCACAAGATCAGAGTCATTGAAGTTTCTTTACTGAATTAATTAATTGAACATTGCAGGAATCTACCATTGCAAGCCTACATGAATGGTTATCAGATCCAGCCATTGGAAACAATCCTACTTTGAGGCTAATTGCAGGAATCATATTCATGCACGAGCAAGATTATAATGAAGCCTTGAAACACACAAATGCTGGAGGAACCATGGAATTGTAAGTCTCAGTTTGAATGCTTTACCAGTAAGATAACAAGACCTAGCAATCCAAAAGTTAATTGTCCAAGCATGTCACATCTACATTTAATTAATGATATCAAGGATGGAAATTTATTAGAATCAAAACTGAAATTAAGGAGAGTGTAATTGAAACTGAAGTTTCATGAATGAAAGAGACAATTTGTAATTTAACTTTTCTGTTTCTCACTGCGTGTTTTATCATCTTAAGTGCCTAATGTAGATTCAAATAGTTGATTTAGGGGAGATATTTGTGAGACTGGACGTGTATAATGTGATTGGCTCAATGAAGCCATGACAGCTTTTTCTCAAAGTGGACAATATCATACCATTCGTGGAGGGTCGTGATTCCTAATAAATAATAGTAATGTAATTGGCTCAAGCCTGATTTTGTTTTTTTCCTTGCAGGCATGCTTTGAATGTTCAAATATTTCTCAAGATGCACAGGTCAGATTATGCAGAGAGACAGCTGAGAGTCATGCAACAGACTGATGAGGATCACACATTAACACAACTTGCAAATGCTTGGTTAAATCTGGCAGTGGTTTGTAGCTTATAGCATTTTTTTCCTTTACACTGAACGAAGGGACACTAGACTTTTGAAGGTAATCTTATTATTCTGTAATTTTTTTACTTGACCAGGGTGGTTCCAAAATACAGGAAGCATATCTCATCTTCCAAGATTTCTCTGAAAAGTATTCCATGACAAGCTTGATTTTGAATGGAAGGGCCGTCTGCTGCATGCATATGGGAAACTTTGATGAAGCAGAGACACTTCTTCTTGAAGCATTGAACAAGGTAATTTTTTAATCACCGTGCACTTGATTACTTATATTGTATAACAGAAACTGCTTATCTGAGGGGATCAAGATTAAATTGGCACAACGAAAGACTAAGCCAGAAAAAAAAAAAAAAAAAATCCCTACACTGAACATCTTTTGTAACATAGTTTTCTTCAATGAATTCCAAGATGATCAAACTTAAGACAGATTGAAAGTTTTCAGGACAACGAAGGATGCAAATATTTTCTATAAATTTCTAATTGTAGATAAGAAGTTGCTTTCATTTTCTCCACAGGATGCAAAAGACCCAGAAACTCTGGCCAATCTAGTTGTATGCAGTCTTCACCTTGGCAAACCAACTTCTCGTTTTCTCAGGTAATGGATAGTGATCCATGGCCAGAAATCTTTTCTGCTAATATTGCTCTCTCTCTCTCTCTCTCTCTCTGGCTGTGGGTTGCAATGCTGTTCTGTAGTCTGCATCTTTGTGAGAATTGGGGGTTGAGGGTAGTTTTAAGAAAGTGATGGTATTTCTATGATCTCTTAAATTATGGACAGTTTAAAGTGAGGTTGGAATGACTTTCTGAGAGTAGTATTTTAAAGTAAAACATTTCCTTTTGACACTTTAGAAGGGGCTTTAATGAGGAGTTTGATATTTTAGATTCCTATTTGGTACCGTAGGTCTTGTTATGCTCATTTAATATCTTTGGTTTTGAGAAATTTATTTTGTCCTTGTCCTGACTCCTGTCTTCACATTTAATGCTTTCCTGGAAATAAGTTGTGTTTTTATTTTAAGCTATTATGGTGAATTTGCCTGTTGATAAAAACTACCTGAGCAGTTGAATTCATCCACAAGTTGGATTAGAATTTTTCTTTCTTACCATGGCTGCTAACATACTTGCCACAAATTTTCAGCCAATTGAAACTTTCGCATCCAGACCACTTGCTTGTTAAACGCATCTCGGCTGCTGAAGAGAACTTCGATAGAGCTGTCCAGTCTGTTGTTTAGTGAGCCCTTGCTGCTTTTGAAAAGGAGATGAACAATGTTTGTTAGTGTTAAACGACAATCTTCACCCCGCGGCCATTTACTGTTAATTGGGGCTGTTGATTTTGCTCAAATTATTCGGCTATTAAATACCAAATCGAACAAAATGTTTGACAGTAGAAGTTATAAAGCTTGATTCTGGTCATTTTGTATTGAGCTTCATAGATGTGATACATGATTATTTGACTTAAGCA

mRNA sequence

TTTCTTTTTATTTTGTTTACTTTTACTCGTTGATTTTCCCAAATTTGTTCAATTGCTTAGTCGGTCTTCTCTCTGTATCCCTCAAGGCTGCTAGATTCAGATCTAGGAGGAGCTTGGACGAAGAAGGAAGAGTGAAAGCATGGCAGCACCGGATCATTTGTTCAATCTCAGAAATCATTTCTATTTGGGAGCGTATCAGGCCGCCATTAACAACAGTAATCTCCCCAATCTCTCCCCCGATGATGCAATTGAGAGGGATTCCATTGTTTACCGCTCTTACATTGCCCTTGGCAGCTATCAGCTAGTGGTTAGCGAGATCGACTCATCCGCCCCTACGCCTCTCCAAGCCGTCAAATTGCTCGCTCTGTATCTGTCTGATCCCAGCAGCAAGGTTTCATTCGTGGATCTATATCCTTTTTAGCTGATTATGTTCGTTTGGAATATAAATTCTTTCTGGAATTCATAGAATTTCAATTATAATTTTGGGTCACACATCTCTATGCCGTGTTACTTCATTCTATAAATTTAAACCATATTTGACATTGATCTGGGGTGACATGCTAAAAGTCTCAAGAAGCGTTTACTGGGAATTCAATGTTGGTGACTCCATTTTATTGGCTAGTGACGTTTGCAGTTCGAACCAACTTAAAAGATTTCAGATTTGACACCTAGTATTGAACGATAATTCACTTTCAAAAAGGAATGAATCCGGTTTCTTGTTCACAAGATCAGAGTCATTGAAGTTTCTTTACTGAATTAATTAATTGAACATTGCAGGAATCTACCATTGCAAGCCTACATGAATGGTTATCAGATCCAGCCATTGGAAACAATCCTACTTTGAGGCTAATTGCAGGAATCATATTCATGCACGAGCAAGATTATAATGAAGCCTTGAAACACACAAATGCTGGAGGAACCATGGAATTGCATGCTTTGAATGTTCAAATATTTCTCAAGATGCACAGGTCAGATTATGCAGAGAGACAGCTGAGAGTCATGCAACAGACTGATGAGGATCACACATTAACACAACTTGCAAATGCTTGGTTAAATCTGGCAGTGGGTGGTTCCAAAATACAGGAAGCATATCTCATCTTCCAAGATTTCTCTGAAAAGTATTCCATGACAAGCTTGATTTTGAATGGAAGGGCCGTCTGCTGCATGCATATGGGAAACTTTGATGAAGCAGAGACACTTCTTCTTGAAGCATTGAACAAGGATGCAAAAGACCCAGAAACTCTGGCCAATCTAGTTGTATGCAGTCTTCACCTTGGCAAACCAACTTCTCGTTTTCTCAGCCAATTGAAACTTTCGCATCCAGACCACTTGCTTGTTAAACGCATCTCGGCTGCTGAAGAGAACTTCGATAGAGCTGTCCAGTCTGTTGTTTAGTGAGCCCTTGCTGCTTTTGAAAAGGAGATGAACAATGTTTGTTAGTGTTAAACGACAATCTTCACCCCGCGGCCATTTACTGTTAATTGGGGCTGTTGATTTTGCTCAAATTATTCGGCTATTAAATACCAAATCGAACAAAATGTTTGACAGTAGAAGTTATAAAGCTTGATTCTGGTCATTTTGTATTGAGCTTCATAGATGTGATACATGATTATTTGACTTAAGCA

Coding sequence (CDS)

ATGCACGAGCAAGATTATAATGAAGCCTTGAAACACACAAATGCTGGAGGAACCATGGAATTGCATGCTTTGAATGTTCAAATATTTCTCAAGATGCACAGGTCAGATTATGCAGAGAGACAGCTGAGAGTCATGCAACAGACTGATGAGGATCACACATTAACACAACTTGCAAATGCTTGGTTAAATCTGGCAGTGGGTGGTTCCAAAATACAGGAAGCATATCTCATCTTCCAAGATTTCTCTGAAAAGTATTCCATGACAAGCTTGATTTTGAATGGAAGGGCCGTCTGCTGCATGCATATGGGAAACTTTGATGAAGCAGAGACACTTCTTCTTGAAGCATTGAACAAGGATGCAAAAGACCCAGAAACTCTGGCCAATCTAGTTGTATGCAGTCTTCACCTTGGCAAACCAACTTCTCGTTTTCTCAGCCAATTGAAACTTTCGCATCCAGACCACTTGCTTGTTAAACGCATCTCGGCTGCTGAAGAGAACTTCGATAGAGCTGTCCAGTCTGTTGTTTAG

Protein sequence

MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV

Homology

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BLAST of Carg14951 vs. NCBI nr
Match: XP_022926620.1 (coatomer subunit epsilon-1-like [Cucurbita moschata] >XP_023517735.1 coatomer subunit epsilon-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 351.3 bits (900), Expect = 1.9e-93
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 60
           MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA
Sbjct: 115 MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 174

Query: 61  WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 120
           WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA
Sbjct: 175 WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 234

Query: 121 KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV 176
           KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV
Sbjct: 235 KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV 289

[Close]

BLAST of Carg14951 vs. NCBI nr
Match: XP_023003039.1 (coatomer subunit epsilon-1-like [Cucurbita maxima])

HSP 1 Score: 349.4 bits (895), Expect = 7.3e-93
Identity = 174/175 (99.43%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 1   MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 60
           MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTL QLANA
Sbjct: 115 MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLAQLANA 174

Query: 61  WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 120
           WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA
Sbjct: 175 WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 234

Query: 121 KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV 176
           KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV
Sbjct: 235 KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV 289

[Close]

BLAST of Carg14951 vs. NCBI nr
Match: XP_023544573.1 (coatomer subunit epsilon-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.7 bits (883), Expect = 1.8e-91
Identity = 170/174 (97.70%), Postives = 173/174 (99.43%), Query Frame = 0


Query: 1   MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 60
           MHEQD+NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA
Sbjct: 115 MHEQDFNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 174

Query: 61  WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 120
           W+NLAVGGSKIQEAYLIFQDFSEKY MTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA
Sbjct: 175 WINLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 234

Query: 121 KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 175
           KDPET+ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV
Sbjct: 235 KDPETMANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 288

[Close]

BLAST of Carg14951 vs. NCBI nr
Match: XP_022146629.1 (coatomer subunit epsilon-2 [Momordica charantia])

HSP 1 Score: 343.2 bits (879), Expect = 5.2e-91
Identity = 170/174 (97.70%), Postives = 172/174 (98.85%), Query Frame = 0


Query: 1   MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 60
           MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA
Sbjct: 115 MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 174

Query: 61  WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 120
           WLNLAVGGSKIQEAYLIFQDFSEKY MTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA
Sbjct: 175 WLNLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 234

Query: 121 KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 175
           KDPETLANLVVCSLHLGK TSRFLSQLKLSHPDHLLVKRISAA+ENFDRAVQS+
Sbjct: 235 KDPETLANLVVCSLHLGKSTSRFLSQLKLSHPDHLLVKRISAADENFDRAVQSI 288

[Close]

BLAST of Carg14951 vs. NCBI nr
Match: XP_022925729.1 (coatomer subunit epsilon-2-like [Cucurbita moschata])

HSP 1 Score: 342.8 bits (878), Expect = 6.8e-91
Identity = 169/174 (97.13%), Postives = 173/174 (99.43%), Query Frame = 0


Query: 1   MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 60
           MHEQD+NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA
Sbjct: 115 MHEQDFNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 174

Query: 61  WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 120
           W+NLAVGGSKIQEAYLIFQDFSEKY MTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA
Sbjct: 175 WINLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 234

Query: 121 KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 175
           KDPET+ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEE+FDRAVQSV
Sbjct: 235 KDPETMANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEESFDRAVQSV 288

[Close]

BLAST of Carg14951 vs. TAIR10
Match: AT1G30630.1 (Coatomer epsilon subunit)

HSP 1 Score: 311.6 bits (797), Expect = 3.0e-85
Identity = 148/173 (85.55%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 60
           MHE+DYNEALKHT++GGTM+LHALNVQIF+KMHRSD+AE+QLRVMQQ DEDHTLTQLA+A
Sbjct: 118 MHEEDYNEALKHTHSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASA 177

Query: 61  WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 120
           WLNLAVGGSKIQEAYLIFQDFSEKY MTSLILNG+AVCCMHMGNF+EAETLLLEALNKDA
Sbjct: 178 WLNLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDA 237

Query: 121 KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQS 174
           KDPETLANLVVCSLH+GK +SR+L+QLKLSHP+H+LVKR ++AE+NF+RA+QS
Sbjct: 238 KDPETLANLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRAASAEDNFERALQS 290

[Close]

BLAST of Carg14951 vs. TAIR10
Match: AT2G34840.1 (Coatomer epsilon subunit)

HSP 1 Score: 306.2 bits (783), Expect = 1.3e-83
Identity = 147/174 (84.48%), Postives = 166/174 (95.40%), Query Frame = 0


Query: 1   MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 60
           MHE+DYNE LKHT+AGGTM+L+ALNVQIF+KMHR++YAE+QLRVMQQ DEDHTLTQLA+A
Sbjct: 119 MHEEDYNETLKHTHAGGTMDLYALNVQIFIKMHRAEYAEKQLRVMQQIDEDHTLTQLASA 178

Query: 61  WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 120
           WLNLAVGGSKIQEAYLIF+DFSEKY MT LILNG+AVCCM MGNFDEAETLLLEALNKDA
Sbjct: 179 WLNLAVGGSKIQEAYLIFEDFSEKYPMTCLILNGKAVCCMQMGNFDEAETLLLEALNKDA 238

Query: 121 KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 175
           KDPETLANLVVCSLH+GK +SR LSQLKLSHP+H+LVKR+S+AE+NF+RAVQ V
Sbjct: 239 KDPETLANLVVCSLHVGKSSSRHLSQLKLSHPEHILVKRVSSAEDNFERAVQLV 292

[Close]

BLAST of Carg14951 vs. Swiss-Prot
Match: sp|Q9SA78|COPE1_ARATH (Coatomer subunit epsilon-1 OS=Arabidopsis thaliana OX=3702 GN=At1g30630 PE=2 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 5.5e-84
Identity = 148/173 (85.55%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 60
           MHE+DYNEALKHT++GGTM+LHALNVQIF+KMHRSD+AE+QLRVMQQ DEDHTLTQLA+A
Sbjct: 118 MHEEDYNEALKHTHSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASA 177

Query: 61  WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 120
           WLNLAVGGSKIQEAYLIFQDFSEKY MTSLILNG+AVCCMHMGNF+EAETLLLEALNKDA
Sbjct: 178 WLNLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDA 237

Query: 121 KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQS 174
           KDPETLANLVVCSLH+GK +SR+L+QLKLSHP+H+LVKR ++AE+NF+RA+QS
Sbjct: 238 KDPETLANLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRAASAEDNFERALQS 290

[Close]

BLAST of Carg14951 vs. Swiss-Prot
Match: sp|Q9MAX6|COPE1_ORYSJ (Coatomer subunit epsilon-1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPE1 PE=2 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.0e-82
Identity = 142/174 (81.61%), Postives = 168/174 (96.55%), Query Frame = 0


Query: 1   MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 60
           MHEQDY EALKHT++GGT++LHALNVQIF+KMHRSDYAE+QL++MQQ DEDHTLTQLANA
Sbjct: 113 MHEQDYTEALKHTHSGGTLDLHALNVQIFIKMHRSDYAEKQLKIMQQIDEDHTLTQLANA 172

Query: 61  WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 120
           WL++AVGGSKI+EAYLIFQDF+EKY MT ++LNG+AVCCMHMG+FDEAETLLLEALNKDA
Sbjct: 173 WLDIAVGGSKIREAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSFDEAETLLLEALNKDA 232

Query: 121 KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 175
           KDPETLANL+VC+LHLGKP+SR+LSQLKLSHPDH+LVKR  +AE+NF+RA+Q+V
Sbjct: 233 KDPETLANLIVCNLHLGKPSSRYLSQLKLSHPDHVLVKRAVSAEDNFERALQAV 286

[Close]

BLAST of Carg14951 vs. Swiss-Prot
Match: sp|O64748|COPE2_ARATH (Coatomer subunit epsilon-2 OS=Arabidopsis thaliana OX=3702 GN=At2g34840 PE=2 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 2.3e-82
Identity = 147/174 (84.48%), Postives = 166/174 (95.40%), Query Frame = 0


Query: 1   MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 60
           MHE+DYNE LKHT+AGGTM+L+ALNVQIF+KMHR++YAE+QLRVMQQ DEDHTLTQLA+A
Sbjct: 119 MHEEDYNETLKHTHAGGTMDLYALNVQIFIKMHRAEYAEKQLRVMQQIDEDHTLTQLASA 178

Query: 61  WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 120
           WLNLAVGGSKIQEAYLIF+DFSEKY MT LILNG+AVCCM MGNFDEAETLLLEALNKDA
Sbjct: 179 WLNLAVGGSKIQEAYLIFEDFSEKYPMTCLILNGKAVCCMQMGNFDEAETLLLEALNKDA 238

Query: 121 KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 175
           KDPETLANLVVCSLH+GK +SR LSQLKLSHP+H+LVKR+S+AE+NF+RAVQ V
Sbjct: 239 KDPETLANLVVCSLHVGKSSSRHLSQLKLSHPEHILVKRVSSAEDNFERAVQLV 292

[Close]

BLAST of Carg14951 vs. Swiss-Prot
Match: sp|A2XY73|COPE2_ORYSI (Coatomer subunit epsilon-2 OS=Oryza sativa subsp. indica OX=39946 GN=H0413E07.10 PE=3 SV=2)

HSP 1 Score: 273.1 bits (697), Expect = 2.2e-72
Identity = 131/174 (75.29%), Postives = 158/174 (90.80%), Query Frame = 0


Query: 1   MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 60
           MHE+DY  ALKHTN+GGTMEL A+NVQI L+MHRSD+AE+QLR+MQQ DEDHTLTQLANA
Sbjct: 123 MHERDYAGALKHTNSGGTMELLAMNVQICLQMHRSDHAEKQLRIMQQLDEDHTLTQLANA 182

Query: 61  WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 120
           W++L +GGSKIQEA+LIFQD SEKY  T LILNG+A+C MHMGNF++AE LLLE+LNKDA
Sbjct: 183 WVDLVMGGSKIQEAHLIFQDLSEKYPATCLILNGKALCLMHMGNFEDAEGLLLESLNKDA 242

Query: 121 KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 175
           KD ETLANLVVCSL+LGK  SR+L+QLKL+HPDH+LVKR+S+AE++FDRA Q++
Sbjct: 243 KDAETLANLVVCSLNLGKSASRYLNQLKLAHPDHMLVKRMSSAEDSFDRACQAI 296

[Close]

BLAST of Carg14951 vs. Swiss-Prot
Match: sp|P0C541|COPE2_ORYSJ (Coatomer subunit epsilon-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0644700 PE=3 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.2e-72
Identity = 131/174 (75.29%), Postives = 158/174 (90.80%), Query Frame = 0


Query: 1   MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 60
           MHE+DY  ALKHTN+GGTMEL A+NVQI L+MHRSD+AE+QLR+MQQ DEDHTLTQLANA
Sbjct: 123 MHERDYAGALKHTNSGGTMELLAMNVQICLQMHRSDHAEKQLRIMQQLDEDHTLTQLANA 182

Query: 61  WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 120
           W++L +GGSKIQEA+LIFQD SEKY  T LILNG+A+C MHMGNF++AE LLLE+LNKDA
Sbjct: 183 WVDLVMGGSKIQEAHLIFQDLSEKYPATCLILNGKALCLMHMGNFEDAEGLLLESLNKDA 242

Query: 121 KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 175
           KD ETLANLVVCSL+LGK  SR+L+QLKL+HPDH+LVKR+S+AE++FDRA Q++
Sbjct: 243 KDAETLANLVVCSLNLGKSASRYLNQLKLAHPDHMLVKRMSSAEDSFDRACQAI 296

[Close]

BLAST of Carg14951 vs. TrEMBL
Match: tr|A0A0A0KIF7|A0A0A0KIF7_CUCSA (Coatomer subunit epsilon OS=Cucumis sativus OX=3659 GN=Csa_6G526290 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 5.9e-91
Identity = 169/174 (97.13%), Postives = 171/174 (98.28%), Query Frame = 0


Query: 1   MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 60
           MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQ DEDHTLTQLANA
Sbjct: 115 MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANA 174

Query: 61  WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 120
           WLNLAVGGSKIQEAYLIFQDFSEKY MTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA
Sbjct: 175 WLNLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 234

Query: 121 KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 175
           KDPETLANLVVCSLHLGKPTSRFLSQLK+SHPDH+LVKRIS AEENFDRAVQSV
Sbjct: 235 KDPETLANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSV 288

[Close]

BLAST of Carg14951 vs. TrEMBL
Match: tr|A0A1S3AYY0|A0A1S3AYY0_CUCME (Coatomer subunit epsilon OS=Cucumis melo OX=3656 GN=LOC103484285 PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 7.7e-91
Identity = 169/174 (97.13%), Postives = 171/174 (98.28%), Query Frame = 0


Query: 1   MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 60
           MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQ DEDHTLTQLANA
Sbjct: 115 MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANA 174

Query: 61  WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 120
           WLNLAVGGSKIQEAYLIFQDFSEKY MTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA
Sbjct: 175 WLNLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 234

Query: 121 KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 175
           KDPETLANLVVC+LHLGKPTSRFLSQLKLSHPDH+LVKRIS AEENFDRAVQSV
Sbjct: 235 KDPETLANLVVCNLHLGKPTSRFLSQLKLSHPDHMLVKRISTAEENFDRAVQSV 288

[Close]

BLAST of Carg14951 vs. TrEMBL
Match: tr|A0A2C9UL55|A0A2C9UL55_MANES (Coatomer subunit epsilon OS=Manihot esculenta OX=3983 GN=MANES_14G126900 PE=3 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 3.0e-87
Identity = 161/174 (92.53%), Postives = 170/174 (97.70%), Query Frame = 0


Query: 1   MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 60
           MHE+DYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAE+QLR MQQ DEDHTLTQLANA
Sbjct: 115 MHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAEKQLRYMQQIDEDHTLTQLANA 174

Query: 61  WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 120
           WLNLAVGGSKIQEAYLIFQDFSEKY MTSLILNG+AVCCMHMGNFDEAETLLLEALNKDA
Sbjct: 175 WLNLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFDEAETLLLEALNKDA 234

Query: 121 KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 175
           KDPETLA+LVVCSLHLGKP+SR+LSQLKLSHPDH+LVKR S+AEENF+RAVQSV
Sbjct: 235 KDPETLADLVVCSLHLGKPSSRYLSQLKLSHPDHMLVKRASSAEENFERAVQSV 288

[Close]

BLAST of Carg14951 vs. TrEMBL
Match: tr|A0A067KFG2|A0A067KFG2_JATCU (Coatomer subunit epsilon OS=Jatropha curcas OX=180498 GN=JCGZ_09150 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.5e-86
Identity = 160/174 (91.95%), Postives = 170/174 (97.70%), Query Frame = 0


Query: 1   MHEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANA 60
           MHE+DYNEALKHTNAGGT+EL+ALNVQIFLKMHRSDYAE+QLRVMQQ DEDHTLTQLANA
Sbjct: 115 MHEEDYNEALKHTNAGGTLELNALNVQIFLKMHRSDYAEKQLRVMQQIDEDHTLTQLANA 174

Query: 61  WLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDA 120
           WLNLAVGGSKIQEAYLIFQDFSEKY MTSLILNG+AVCCMHMGNFDEAETLLLEALNKDA
Sbjct: 175 WLNLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFDEAETLLLEALNKDA 234

Query: 121 KDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 175
           KDPETLANLVVCSLHLGKP+SR+LSQLKLSHPDH+LVKR + AEENF+RAVQSV
Sbjct: 235 KDPETLANLVVCSLHLGKPSSRYLSQLKLSHPDHILVKRATYAEENFERAVQSV 288

[Close]

BLAST of Carg14951 vs. TrEMBL
Match: tr|A0A2P4HM60|A0A2P4HM60_QUESU (Coatomer subunit epsilon OS=Quercus suber OX=58331 GN=CFP56_47989 PE=3 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 7.4e-86
Identity = 161/173 (93.06%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 2   HEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANAW 61
           HEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLR MQQ +EDHTLTQLANAW
Sbjct: 117 HEQDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIEEDHTLTQLANAW 176

Query: 62  LNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAK 121
           LNLAVGGSKIQEAYLIFQDFSEKY MTSLILNG+AVCCMHMGNFDEAETLLLEALNKDAK
Sbjct: 177 LNLAVGGSKIQEAYLIFQDFSEKYQMTSLILNGKAVCCMHMGNFDEAETLLLEALNKDAK 236

Query: 122 DPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 175
           DPETLANLVVC LHLGKP+SRFLSQLKLS PDH+LVKR S AEE+FDRAVQSV
Sbjct: 237 DPETLANLVVCCLHLGKPSSRFLSQLKLSLPDHVLVKRASTAEESFDRAVQSV 289

The following BLAST results are available for this feature:

BLAST of Carg14951 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926620.1	1.9e-93	100.00	coatomer subunit epsilon-1-like [Cucurbita moschata] >XP_023517735.1 coatomer su...	[more]
XP_023003039.1	7.3e-93	99.43	coatomer subunit epsilon-1-like [Cucurbita maxima]	[more]
XP_023544573.1	1.8e-91	97.70	coatomer subunit epsilon-2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022146629.1	5.2e-91	97.70	coatomer subunit epsilon-2 [Momordica charantia]	[more]
XP_022925729.1	6.8e-91	97.13	coatomer subunit epsilon-2-like [Cucurbita moschata]	[more]

BLAST of Carg14951 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G30630.1	3.0e-85	85.55	Coatomer epsilon subunit	[more]
AT2G34840.1	1.3e-83	84.48	Coatomer epsilon subunit	[more]

BLAST of Carg14951 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SA78\|COPE1_ARATH	5.5e-84	85.55	Coatomer subunit epsilon-1 OS=Arabidopsis thaliana OX=3702 GN=At1g30630 PE=2 SV=...	[more]
sp\|Q9MAX6\|COPE1_ORYSJ	1.0e-82	81.61	Coatomer subunit epsilon-1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPE1 PE=...	[more]
sp\|O64748\|COPE2_ARATH	2.3e-82	84.48	Coatomer subunit epsilon-2 OS=Arabidopsis thaliana OX=3702 GN=At2g34840 PE=2 SV=...	[more]
sp\|A2XY73\|COPE2_ORYSI	2.2e-72	75.29	Coatomer subunit epsilon-2 OS=Oryza sativa subsp. indica OX=39946 GN=H0413E07.10...	[more]
sp\|P0C541\|COPE2_ORYSJ	2.2e-72	75.29	Coatomer subunit epsilon-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0644...	[more]

BLAST of Carg14951 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KIF7\|A0A0A0KIF7_CUCSA	5.9e-91	97.13	Coatomer subunit epsilon OS=Cucumis sativus OX=3659 GN=Csa_6G526290 PE=3 SV=1	[more]
tr\|A0A1S3AYY0\|A0A1S3AYY0_CUCME	7.7e-91	97.13	Coatomer subunit epsilon OS=Cucumis melo OX=3656 GN=LOC103484285 PE=3 SV=1	[more]
tr\|A0A2C9UL55\|A0A2C9UL55_MANES	3.0e-87	92.53	Coatomer subunit epsilon OS=Manihot esculenta OX=3983 GN=MANES_14G126900 PE=3 SV...	[more]
tr\|A0A067KFG2\|A0A067KFG2_JATCU	1.5e-86	91.95	Coatomer subunit epsilon OS=Jatropha curcas OX=180498 GN=JCGZ_09150 PE=3 SV=1	[more]
tr\|A0A2P4HM60\|A0A2P4HM60_QUESU	7.4e-86	93.06	Coatomer subunit epsilon OS=Quercus suber OX=58331 GN=CFP56_47989 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006890	retrograde vesicle-mediated transport, Golgi to ER

Vocabulary: **Molecular Function**
Term	Definition
GO:0005198	structural molecule activity
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR006822	Coatomer_esu
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005198	structural molecule activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14951-RA	Carg14951-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 1..174 e-value: 5.4E-69 score: 235.1
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 58..138
None	No IPR available	PFAM	PF04733	Coatomer_E	coord: 1..174 e-value: 2.7E-86 score: 289.5
None	No IPR available	PANTHER	PTHR10805:SF1	SUBFAMILY NOT NAMED	coord: 1..174
IPR006822	Coatomer, epsilon subunit	PANTHER	PTHR10805	COATOMER SUBUNIT EPSILON	coord: 1..174

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg14951	Cla009858	Watermelon (97103) v1	carwmB0730
Carg14951	Csa6G526290	Cucumber (Chinese Long) v2	carcuB0748
Carg14951	MELO3C007042	Melon (DHL92) v3.5.1	carmeB0725
Carg14951	ClCG01G025420	Watermelon (Charleston Gray)	carwcgB0707
Carg14951	CSPI06G37160	Wild cucumber (PI 183967)	carcpiB0764
Carg14951	Cucsa.048570	Cucumber (Gy14) v1	carcgyB0822
Carg14951	CmaCh07G000390	Cucurbita maxima (Rimu)	carcmaB1024
Carg14951	CmaCh03G014690	Cucurbita maxima (Rimu)	carcmaB1023
Carg14951	CmoCh07G000420	Cucurbita moschata (Rifu)	carcmoB0996
Carg14951	CmoCh03G014700	Cucurbita moschata (Rifu)	carcmoB0995
Carg14951	LsiUNG001770	Bottle gourd (USVL1VR-Ls)	carlsiB668
Carg14951	Cp4.1LG10g06580	Cucurbita pepo (Zucchini)	carcpeB1028
Carg14951	Cp4.1LG19g05480	Cucurbita pepo (Zucchini)	carcpeB1029
Carg14951	CsGy6G036550	Cucumber (Gy14) v2	carcgybB0726
Carg14951	MELO3C007042.2	Melon (DHL92) v3.6.1	carmedB0736
Carg14951	CsaV3_6G052670	Cucumber (Chinese Long) v3	carcucB0767
Carg14951	Cla97C01G025560	Watermelon (97103) v2	carwmbB0764

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg14951	Silver-seed gourd	carcarB328
Carg14951	Bottle gourd (USVL1VR-Ls)	carlsiB669
Carg14951	Wax gourd	carwgoB0863