Carg14944 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg14944
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	polygalacturonase QRT3-like
Location	Cucurbita_argyrosperma_scaffold_071 : 199349 .. 201409 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAACAATCAGCTTTCTCATTCATTTTATGTCTCCCGACCATGCTCCTCTTGCCCCTTCTTTCTGCAGCTCCCAATACGCCCTCCCTTTCTTCTCCGGCGCCGGCCACCCACGTTTCCACCCGCATTCGCCATTACAATCACCATTTGAGCAAATTACACAAACTCAAATCCTCGCTCTCGGTTCAACGCGATTCCGTTCCCACTGACGCTCGTGTGTATCACGTGACCTCCTACGGAGCCGATCCCACGGGTAAAAACGACAGCACAGAATCGATTCTCCGGGTGTTTTCCGACGCGTACGGGTCTGCGAGTGACTTGTCTTTGATCGACGGCGTCAGAAATCTGGGTGGGGTTCAGATTAATCTGGATGGTGGACATTACTTGATCAGCCGTCCGTTGCGGTTACCGGGTGCCGGTGTAGGAAATATTGTGGTACGCTTTCCCGCACTTGATTGCAGAATTCTCACTAATTTAGAGTCGAAACTAAAATGAATTAATTGAAAATTAAAAAAAGTGTGGAACTAAAATTGATATTTGGAGTAGAAATGGGAAGATGGTGGGTGAAAATTAATGATAGAGAGCCATAAATGTGAATTCACATGCTTCCTTCCTGAATACTCGACACTTAATTTTGGCAAAGAAAAAACAGGAGTCTATTAAGCTCTTTTTTTAATTGAGTTTTAAATTGAAAAAAATAAAAAAAATAATAATAATAAATTCAAAGGGTAGCTTTTGGGAAATGGAAAGCATTGCTTGTCCAGACCAAACGCCCTTCGCTTTCTTTCCGTCCAAATCTTGCTTTCTTCGTGCACCAATAAATTCAACTCCCAACTTCTTTTTTAACTTTTCTTCGGATTCTTATATCTACTCCTGACTTTATACCTCTTGAATTAATTTATGAATTAATTTATGAAGCAATTTATGAAGCAATTTATGAAGCAATTTATGAATTAGCAATGCAGTTTAACGAATTTGATTATGAATTAGATACAAGGAGGAAGTTTCCACGCTTCAGACGATTTTCCCTCTGATGGTTACCTCATCGAATTGTCGCCTTCGCCATCAGCGGCAGCCAAAATAATGGAGAACAACAAAGTGATGAACTCCGCAGAAGATGCGTCGCTTACTTCTTCTACGTCTTACAATTACGAGTACATCACTTTCAGAGACCTTCTATTGGATTGCAATTACAGAGGGGGCGGCATTTCGATCGTCAATTCCTTGAGAATAACTATAGATAATTGCTACATCACACATTTCGCCACCACTGGAATTTCAGTGCGAGGCGGCCACGAAACCTACATTCGAAGCTCCTTCCTCGGCCAGCATATCACCGCGGGTGGCGATCCCGGTGAACGAAACTTCTCTGGGACTGGAATCAGCCTCGTCGGCAATGACAACGCCGTCATTGACGTCGTCATTTTCTCCGCTGCAACAGGAATCTTCATCTCCGGCCAAGCAAACCTTATCTCGGGCGTGCATTGCTACAACAAGGCTACCGGATTCGGCGGTACTGGAATATACTTGCAGTTACCGGGGCTAACACAGACCAGAATCGTGGATTCCTACATGGACTACACCGGAATCGTGGCGGAAGATCCAGTTCAACTCCATATTTCGAACACCTTATTCCTCGGCGACGCTGCGATCACGCTGAAATCGATCAACGGAGTCGTTAATGGATTGAACATCGTGGATAACATGTTCAGCGGATCGAACGCAGGAGTGGCGATCGTACAACTGGACGAATCGAAATCTGCATTCAAGCAAATAGATCAGGTGGTGATCGCGAGGAACAACGTGAAAGGAATGCAAGTGAAATCAACTGTCGGAAGCGCGGAATGGCAGGGAAACGGAACTTCATGGACTGTGGATTTCAATCCCGTTCTGGTGTTTCCGAATTTGATTAGGAACGTACAGTATTCGTTTCGAAGCACCGACAGCGGATTCCCAAAGCACATGGTGAGAAATGTGTCGGATAATCGGGTGGTGATCGAGACGGACGTCGCAGTGTCGGGAAGCGTGTACGCGAGGGTTGATCAAGGGCAGAGTTAG

mRNA sequence

ATGGCGAAACAATCAGCTTTCTCATTCATTTTATGTCTCCCGACCATGCTCCTCTTGCCCCTTCTTTCTGCAGCTCCCAATACGCCCTCCCTTTCTTCTCCGGCGCCGGCCACCCACGTTTCCACCCGCATTCGCCATTACAATCACCATTTGAGCAAATTACACAAACTCAAATCCTCGCTCTCGGTTCAACGCGATTCCGTTCCCACTGACGCTCGTGTGTATCACGTGACCTCCTACGGAGCCGATCCCACGGGTAAAAACGACAGCACAGAATCGATTCTCCGGGTGTTTTCCGACGCGTACGGGTCTGCGAGTGACTTGTCTTTGATCGACGGCGTCAGAAATCTGGGTGGGGTTCAGATTAATCTGGATGGTGGACATTACTTGATCAGCCGTCCGTTGCGGTTACCGGGTGCCGGTGTAGGAAATATTGTGATACAAGGAGGAAGTTTCCACGCTTCAGACGATTTTCCCTCTGATGGTTACCTCATCGAATTGTCGCCTTCGCCATCAGCGGCAGCCAAAATAATGGAGAACAACAAAGTGATGAACTCCGCAGAAGATGCGTCGCTTACTTCTTCTACGTCTTACAATTACGAGTACATCACTTTCAGAGACCTTCTATTGGATTGCAATTACAGAGGGGGCGGCATTTCGATCGTCAATTCCTTGAGAATAACTATAGATAATTGCTACATCACACATTTCGCCACCACTGGAATTTCAGTGCGAGGCGGCCACGAAACCTACATTCGAAGCTCCTTCCTCGGCCAGCATATCACCGCGGGTGGCGATCCCGGTGAACGAAACTTCTCTGGGACTGGAATCAGCCTCGTCGGCAATGACAACGCCGTCATTGACGTCGTCATTTTCTCCGCTGCAACAGGAATCTTCATCTCCGGCCAAGCAAACCTTATCTCGGGCGTGCATTGCTACAACAAGGCTACCGGATTCGGCGGTACTGGAATATACTTGCAGTTACCGGGGCTAACACAGACCAGAATCGTGGATTCCTACATGGACTACACCGGAATCGTGGCGGAAGATCCAGTTCAACTCCATATTTCGAACACCTTATTCCTCGGCGACGCTGCGATCACGCTGAAATCGATCAACGGAGTCGTTAATGGATTGAACATCGTGGATAACATGTTCAGCGGATCGAACGCAGGAGTGGCGATCGTACAACTGGACGAATCGAAATCTGCATTCAAGCAAATAGATCAGGTGGTGATCGCGAGGAACAACGTGAAAGGAATGCAAGTGAAATCAACTGTCGGAAGCGCGGAATGGCAGGGAAACGGAACTTCATGGACTGTGGATTTCAATCCCGTTCTGGTGTTTCCGAATTTGATTAGGAACGTACAGTATTCGTTTCGAAGCACCGACAGCGGATTCCCAAAGCACATGGTGAGAAATGTGTCGGATAATCGGGTGGTGATCGAGACGGACGTCGCAGTGTCGGGAAGCGTGTACGCGAGGGTTGATCAAGGGCAGAGTTAG

Coding sequence (CDS)

ATGGCGAAACAATCAGCTTTCTCATTCATTTTATGTCTCCCGACCATGCTCCTCTTGCCCCTTCTTTCTGCAGCTCCCAATACGCCCTCCCTTTCTTCTCCGGCGCCGGCCACCCACGTTTCCACCCGCATTCGCCATTACAATCACCATTTGAGCAAATTACACAAACTCAAATCCTCGCTCTCGGTTCAACGCGATTCCGTTCCCACTGACGCTCGTGTGTATCACGTGACCTCCTACGGAGCCGATCCCACGGGTAAAAACGACAGCACAGAATCGATTCTCCGGGTGTTTTCCGACGCGTACGGGTCTGCGAGTGACTTGTCTTTGATCGACGGCGTCAGAAATCTGGGTGGGGTTCAGATTAATCTGGATGGTGGACATTACTTGATCAGCCGTCCGTTGCGGTTACCGGGTGCCGGTGTAGGAAATATTGTGATACAAGGAGGAAGTTTCCACGCTTCAGACGATTTTCCCTCTGATGGTTACCTCATCGAATTGTCGCCTTCGCCATCAGCGGCAGCCAAAATAATGGAGAACAACAAAGTGATGAACTCCGCAGAAGATGCGTCGCTTACTTCTTCTACGTCTTACAATTACGAGTACATCACTTTCAGAGACCTTCTATTGGATTGCAATTACAGAGGGGGCGGCATTTCGATCGTCAATTCCTTGAGAATAACTATAGATAATTGCTACATCACACATTTCGCCACCACTGGAATTTCAGTGCGAGGCGGCCACGAAACCTACATTCGAAGCTCCTTCCTCGGCCAGCATATCACCGCGGGTGGCGATCCCGGTGAACGAAACTTCTCTGGGACTGGAATCAGCCTCGTCGGCAATGACAACGCCGTCATTGACGTCGTCATTTTCTCCGCTGCAACAGGAATCTTCATCTCCGGCCAAGCAAACCTTATCTCGGGCGTGCATTGCTACAACAAGGCTACCGGATTCGGCGGTACTGGAATATACTTGCAGTTACCGGGGCTAACACAGACCAGAATCGTGGATTCCTACATGGACTACACCGGAATCGTGGCGGAAGATCCAGTTCAACTCCATATTTCGAACACCTTATTCCTCGGCGACGCTGCGATCACGCTGAAATCGATCAACGGAGTCGTTAATGGATTGAACATCGTGGATAACATGTTCAGCGGATCGAACGCAGGAGTGGCGATCGTACAACTGGACGAATCGAAATCTGCATTCAAGCAAATAGATCAGGTGGTGATCGCGAGGAACAACGTGAAAGGAATGCAAGTGAAATCAACTGTCGGAAGCGCGGAATGGCAGGGAAACGGAACTTCATGGACTGTGGATTTCAATCCCGTTCTGGTGTTTCCGAATTTGATTAGGAACGTACAGTATTCGTTTCGAAGCACCGACAGCGGATTCCCAAAGCACATGGTGAGAAATGTGTCGGATAATCGGGTGGTGATCGAGACGGACGTCGCAGTGTCGGGAAGCGTGTACGCGAGGGTTGATCAAGGGCAGAGTTAG

Protein sequence

MAKQSAFSFILCLPTMLLLPLLSAAPNTPSLSSPAPATHVSTRIRHYNHHLSKLHKLKSSLSVQRDSVPTDARVYHVTSYGADPTGKNDSTESILRVFSDAYGSASDLSLIDGVRNLGGVQINLDGGHYLISRPLRLPGAGVGNIVIQGGSFHASDDFPSDGYLIELSPSPSAAAKIMENNKVMNSAEDASLTSSTSYNYEYITFRDLLLDCNYRGGGISIVNSLRITIDNCYITHFATTGISVRGGHETYIRSSFLGQHITAGGDPGERNFSGTGISLVGNDNAVIDVVIFSAATGIFISGQANLISGVHCYNKATGFGGTGIYLQLPGLTQTRIVDSYMDYTGIVAEDPVQLHISNTLFLGDAAITLKSINGVVNGLNIVDNMFSGSNAGVAIVQLDESKSAFKQIDQVVIARNNVKGMQVKSTVGSAEWQGNGTSWTVDFNPVLVFPNLIRNVQYSFRSTDSGFPKHMVRNVSDNRVVIETDVAVSGSVYARVDQGQS

Homology

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BLAST of Carg14944 vs. NCBI nr
Match: XP_022926516.1 (polygalacturonase QRT3-like [Cucurbita moschata])

HSP 1 Score: 913.7 bits (2360), Expect = 2.8e-262
Identity = 493/501 (98.40%), Postives = 497/501 (99.20%), Query Frame = 0


Query: 1   MAKQSAFSFILCLPTMLLLPLLSAAPNTPSLSSPAPATHVSTRIRHYNHHLSKLHKLKSS 60
           MAKQSAFSFILCLP +LLLPLLSAAPNTPSLSSPAPATHVS RIRHYNHHLSKLHKLKSS
Sbjct: 1   MAKQSAFSFILCLPAILLLPLLSAAPNTPSLSSPAPATHVSARIRHYNHHLSKLHKLKSS 60

Query: 61  LSVQRDSVPTDARVYHVTSYGADPTGKNDSTESILRVFSDAYGSASDLSLIDGVRNLGGV 120
           LSVQRDSVPTDARVYHVTSYGADPTGKNDSTESILRVFSDAYGSASDLSLIDGVRNLGGV
Sbjct: 61  LSVQRDSVPTDARVYHVTSYGADPTGKNDSTESILRVFSDAYGSASDLSLIDGVRNLGGV 120

Query: 121 QINLDGGHYLISRPLRLPGAGVGNIVIQGGSFHASDDFPSDGYLIELSPSPSAAAKIMEN 180
           QINLDGGHYLISRPLRLPGAGVGNIV+QGGS HASDDFPSDGYLIELSPSPSAAAKIMEN
Sbjct: 121 QINLDGGHYLISRPLRLPGAGVGNIVMQGGSLHASDDFPSDGYLIELSPSPSAAAKIMEN 180

Query: 181 NKVMNSAEDASLTSSTSYNYEYITFRDLLLDCNYRGGGISIVNSLRITIDNCYITHFATT 240
           NKVM+SAEDASLTSSTSYNYEYITFRDLLLDCNYRGGGISIVNSLRITIDNCYITHFATT
Sbjct: 181 NKVMDSAEDASLTSSTSYNYEYITFRDLLLDCNYRGGGISIVNSLRITIDNCYITHFATT 240

Query: 241 GISVRGGHETYIRSSFLGQHITAGGDPGERNFSGTGISLVGNDNAVIDVVIFSAATXXXX 300
           GISVR GHETYIRSSFLGQHITAGGDPGERNFSGTGISLVGNDNAVIDVVIFSAATXXXX
Sbjct: 241 GISVRSGHETYIRSSFLGQHITAGGDPGERNFSGTGISLVGNDNAVIDVVIFSAATXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXFGGTGIYLQLPGLTQTRIVDSYMDYTGIVAEDPVQLHISNTL 360
           XXXXXXXXXXXXXXXXXXFGGTGIYLQLPGLTQTRIVDSYMDYTGIVAEDPVQLHISNTL
Sbjct: 301 XXXXXXXXXXXXXXXXXXFGGTGIYLQLPGLTQTRIVDSYMDYTGIVAEDPVQLHISNTL 360

Query: 361 FLGDAAITLKSINGVVNGLNIVDNMFSGSNAGVAIVQLDESKSAFKQIDQVVIARNNVKG 420
           FLGDAAITLKSINGVVNGLNIVDNMFSGSNAGVAIVQLDESKSAFKQIDQVVIARNNVKG
Sbjct: 361 FLGDAAITLKSINGVVNGLNIVDNMFSGSNAGVAIVQLDESKSAFKQIDQVVIARNNVKG 420

Query: 421 MQVKSTVGSAEWQGNGTSWTVDFNPVLVFPNLIRNVQYSFRSTDSGFPKHMVRNVSDNRV 480
           MQVKSTVGSAEWQGNGTSWTVDFNPVLVFPNLIRNVQYSFRSTD+GFPKHMVRNVSDNRV
Sbjct: 421 MQVKSTVGSAEWQGNGTSWTVDFNPVLVFPNLIRNVQYSFRSTDNGFPKHMVRNVSDNRV 480

Query: 481 VIETDVAVSGSVYARVDQGQS 502
           VIETDVAVSGSVYARVDQGQS
Sbjct: 481 VIETDVAVSGSVYARVDQGQS 501

[Close]

BLAST of Carg14944 vs. NCBI nr
Match: XP_023517548.1 (polygalacturonase QRT3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 903.3 bits (2333), Expect = 3.7e-259
Identity = 487/501 (97.21%), Postives = 492/501 (98.20%), Query Frame = 0


Query: 1   MAKQSAFSFILCLPTMLLLPLLSAAPNTPSLSSPAPATHVSTRIRHYNHHLSKLHKLKSS 60
           MAKQ AFSFILCLPTMLL PLLSAAPNTPSLSSP PATHVS RIRHYNHHL+KLHKLKSS
Sbjct: 1   MAKQPAFSFILCLPTMLLFPLLSAAPNTPSLSSPPPATHVSARIRHYNHHLTKLHKLKSS 60

Query: 61  LSVQRDSVPTDARVYHVTSYGADPTGKNDSTESILRVFSDAYGSASDLSLIDGVRNLGGV 120
           L V RDSVPTDARVYHVTSYGADPTGKNDSTESILRVFSDAYGS SDLSLIDGVRNLGGV
Sbjct: 61  LLVPRDSVPTDARVYHVTSYGADPTGKNDSTESILRVFSDAYGSTSDLSLIDGVRNLGGV 120

Query: 121 QINLDGGHYLISRPLRLPGAGVGNIVIQGGSFHASDDFPSDGYLIELSPSPSAAAKIMEN 180
           QINLDGGHYLISRPLRLPGAGVGNIVIQGGS HASDDFPSDGYLIELSPSPSAAAKIMEN
Sbjct: 121 QINLDGGHYLISRPLRLPGAGVGNIVIQGGSLHASDDFPSDGYLIELSPSPSAAAKIMEN 180

Query: 181 NKVMNSAEDASLTSSTSYNYEYITFRDLLLDCNYRGGGISIVNSLRITIDNCYITHFATT 240
            +VMNSAEDASL+SSTSYNYEYITFRDLLLDCNYRGGGISIVNSLRI+IDNCYITHFATT
Sbjct: 181 ERVMNSAEDASLSSSTSYNYEYITFRDLLLDCNYRGGGISIVNSLRISIDNCYITHFATT 240

Query: 241 GISVRGGHETYIRSSFLGQHITAGGDPGERNFSGTGISLVGNDNAVIDVVIFSAATXXXX 300
           GISVRGGHETYIRSSFLGQHITAGGDPGERNFSGTGISLVGNDNAVIDVVIFSAATXXXX
Sbjct: 241 GISVRGGHETYIRSSFLGQHITAGGDPGERNFSGTGISLVGNDNAVIDVVIFSAATXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXFGGTGIYLQLPGLTQTRIVDSYMDYTGIVAEDPVQLHISNTL 360
           XXXXXXXXXXXXXXXXXXFGGTGIYLQLPGLTQTRIVDSYMDYTGIVAEDPVQLHISNTL
Sbjct: 301 XXXXXXXXXXXXXXXXXXFGGTGIYLQLPGLTQTRIVDSYMDYTGIVAEDPVQLHISNTL 360

Query: 361 FLGDAAITLKSINGVVNGLNIVDNMFSGSNAGVAIVQLDESKSAFKQIDQVVIARNNVKG 420
           FLGDAAITLKSINGVVNGLNIVDNMFSGSNAGVAIVQLDESKSAFKQIDQVVIARNNVKG
Sbjct: 361 FLGDAAITLKSINGVVNGLNIVDNMFSGSNAGVAIVQLDESKSAFKQIDQVVIARNNVKG 420

Query: 421 MQVKSTVGSAEWQGNGTSWTVDFNPVLVFPNLIRNVQYSFRSTDSGFPKHMVRNVSDNRV 480
           MQVKSTVGSAEWQGNGTSWTVDFNPVLVFPNLIRNVQYSFRSTD+GFPKHMVRNVSDNRV
Sbjct: 421 MQVKSTVGSAEWQGNGTSWTVDFNPVLVFPNLIRNVQYSFRSTDNGFPKHMVRNVSDNRV 480

Query: 481 VIETDVAVSGSVYARVDQGQS 502
           VIETDVAVSGSVYARVDQGQS
Sbjct: 481 VIETDVAVSGSVYARVDQGQS 501

[Close]

BLAST of Carg14944 vs. NCBI nr
Match: XP_023003036.1 (polygalacturonase QRT3-like [Cucurbita maxima])

HSP 1 Score: 898.7 bits (2321), Expect = 9.2e-258
Identity = 462/501 (92.22%), Postives = 468/501 (93.41%), Query Frame = 0


Query: 1   MAKQSAFSFILCLPTMLLLPLLSAAPNTPSLSSPAPATHVSTRIRHYNHHLSKLHKLKSS 60
           MAKQSAFSFILCLPTMLLLPLLSAAPNTPSLSSPAPATH S RIRHYNHHLSKLHKLK S
Sbjct: 1   MAKQSAFSFILCLPTMLLLPLLSAAPNTPSLSSPAPATHFSARIRHYNHHLSKLHKLKPS 60

Query: 61  LSVQRDSVPTDARVYHVTSYGADPTGKNDSTESILRVFSDAYGSASDLSLIDGVRNLGGV 120
           LSVQRD+VPTDARVYHVTSYGADP+GKNDSTESILR FSD YGS SDLSLI GVRNLGGV
Sbjct: 61  LSVQRDAVPTDARVYHVTSYGADPSGKNDSTESILRAFSDVYGSTSDLSLIGGVRNLGGV 120

Query: 121 QINLDGGHYLISRPLRLPGAGVGNIVIQGGSFHASDDFPSDGYLIELSPSPSAAAKIMEN 180
           QINLDGGHYLISRPLRLPGAGVGNIVIQGGS HASDDFPSDGYLIELSPSPSAA KIMEN
Sbjct: 121 QINLDGGHYLISRPLRLPGAGVGNIVIQGGSLHASDDFPSDGYLIELSPSPSAAPKIMEN 180

Query: 181 NKVMNSAEDASLTSSTSYNYEYITFRDLLLDCNYRGGGISIVNSLRITIDNCYITHFATT 240
           NKVMNSAEDASL+SSTSYNYEYITFRDLLLDCNYRGG ISIVNSLRI+IDNCYITHFATT
Sbjct: 181 NKVMNSAEDASLSSSTSYNYEYITFRDLLLDCNYRGGAISIVNSLRISIDNCYITHFATT 240

Query: 241 GISVRGGHETYIRSSFLGQHITAGGDPGERNFSGTGISLVGNDNAVIDVVIFSAATXXXX 300
           GISVR GHETYIRSSFLGQHITAGGDPGERNFSGTGISLVGNDNAVIDVVIFSAAT    
Sbjct: 241 GISVRSGHETYIRSSFLGQHITAGGDPGERNFSGTGISLVGNDNAVIDVVIFSAATGIFI 300

Query: 301 XXXXXXXXXXXXXXXXXXFGGTGIYLQLPGLTQTRIVDSYMDYTGIVAEDPVQLHISNTL 360
                             FGGTGIYLQLPGLTQTRIVDSYMDYTGIVAEDPVQLHISNTL
Sbjct: 301 SGQANIISGVHCYNKAAGFGGTGIYLQLPGLTQTRIVDSYMDYTGIVAEDPVQLHISNTL 360

Query: 361 FLGDAAITLKSINGVVNGLNIVDNMFSGSNAGVAIVQLDESKSAFKQIDQVVIARNNVKG 420
           FLGDAAITLKSINGVVNGLNIVDNMFSGSNAGVAIVQLDESKSAFKQIDQVVIARNNVKG
Sbjct: 361 FLGDAAITLKSINGVVNGLNIVDNMFSGSNAGVAIVQLDESKSAFKQIDQVVIARNNVKG 420

Query: 421 MQVKSTVGSAEWQGNGTSWTVDFNPVLVFPNLIRNVQYSFRSTDSGFPKHMVRNVSDNRV 480
           MQVKST+GSAEWQGNGTSWTVDFNPVLVFPNLIRNVQYSFRSTD+GFPKHMVRNVSDNRV
Sbjct: 421 MQVKSTIGSAEWQGNGTSWTVDFNPVLVFPNLIRNVQYSFRSTDNGFPKHMVRNVSDNRV 480

Query: 481 VIETDVAVSGSVYARVDQGQS 502
           VIETDVAVSGSVYARVDQGQS
Sbjct: 481 VIETDVAVSGSVYARVDQGQS 501

[Close]

BLAST of Carg14944 vs. NCBI nr
Match: XP_004134539.1 (PREDICTED: polygalacturonase QRT3-like [Cucumis sativus] >KGN49507.1 hypothetical protein Csa_6G526410 [Cucumis sativus])

HSP 1 Score: 682.2 bits (1759), Expect = 1.4e-192
Identity = 383/516 (74.22%), Postives = 435/516 (84.30%), Query Frame = 0


Query: 2   AKQSAFSFILCLPTMLLLPLLSAA-PNTPSLSSPAPATHVS-TRIRHYNHHLSKLHKLKS 61
           +K   F  +L LP   +LP LS+A P+  S SSPAP TH S     HY+ H S L KLKS
Sbjct: 3   SKPLLFFILLSLP---ILPFLSSATPSLDSHSSPAPPTHFSGGSSSHYHRHFSNLRKLKS 62

Query: 62  SLSVQRDSV------------PTDARVYHVTSYGADPTGKNDSTESILRVFSDAYGSASD 121
           SLSV+ +S             P+ ARVYHVTSYGADPTGK DST+S+L+ FSD Y S  +
Sbjct: 63  SLSVRHESAPSAPNPSFITTPPSGARVYHVTSYGADPTGKTDSTDSLLKAFSDVYNSNGE 122

Query: 122 LSLIDGVRNLGGVQINLDGGHYLISRPLRLPGAGVGNIVIQGGSFHASDDFPSDGYLIEL 181
            SL++G++NLGGVQINLDGG+++ISRPLRLPG GVGN+VI GGS  ASDDFPSDGYLIEL
Sbjct: 123 GSLMEGIKNLGGVQINLDGGNFMISRPLRLPGVGVGNVVIHGGSLRASDDFPSDGYLIEL 182

Query: 182 SPSPSAAAKIMENNKVMN-SAEDASLTSS-TSYNYEYITFRDLLLDCNYRGGGISIVNSL 241
           S S SA     +N K +N S++DA L SS +SYNYEYI+F+DLLLD N+RGGGIS++NSL
Sbjct: 183 SSSSSAPKNSFDNQKTINSSSQDAILISSPSSYNYEYISFKDLLLDSNFRGGGISVLNSL 242

Query: 242 RITIDNCYITHFATTGISVRGGHETYIRSSFLGQHITAGGDPGERNFSGTGISLVGNDNA 301
           RITIDNCYITHF T GISV+GGHETYIRSSFLGQHITAGGDPGERNFSGTGISL+GNDNA
Sbjct: 243 RITIDNCYITHFTTIGISVQGGHETYIRSSFLGQHITAGGDPGERNFSGTGISLLGNDNA 302

Query: 302 VIDVVIFSAATXXXXXXXXXXXXXXXXXXXXXXFGGTGIYLQLPGLTQTRIVDSYMDYTG 361
           V DVVIFSAA XXXXXXXXXXXXXXXXXXXXXXFGGTGIYLQLPGLTQTRI++SYMDYTG
Sbjct: 303 VTDVVIFSAAXXXXXXXXXXXXXXXXXXXXXXXFGGTGIYLQLPGLTQTRILNSYMDYTG 362

Query: 362 IVAEDPVQLHISNTLFLGDAAITLKSINGVVNGLNIVDNMFSGSNAGVAIVQLDESKSAF 421
           IVAEDPVQL I+NT FLGD+ ITLKS+NGV +G+NIVDNMFSGS+ GVAIVQLDESKSAF
Sbjct: 363 IVAEDPVQLQIANTFFLGDSYITLKSMNGVASGVNIVDNMFSGSDKGVAIVQLDESKSAF 422

Query: 422 KQIDQVVIARNNVKGMQVKSTVGSAEWQGNGTSWTVDFNPVLVFPNLIRNVQYSFRSTDS 481
           KQ+DQVV+ RNNV+GMQ KSTVGSAE +GNGTSW +DFNPVL+FPNLI+NVQY+FRS D+
Sbjct: 423 KQVDQVVVERNNVRGMQAKSTVGSAELEGNGTSWVLDFNPVLLFPNLIKNVQYTFRSIDN 482

Query: 482 GFPKHMVRNVSDNRVVIETDVAVSGSVYARVDQGQS 502
           GFPKH+VRNVSDNRVVIETDVAV GSV+ARVDQG S
Sbjct: 483 GFPKHIVRNVSDNRVVIETDVAVVGSVFARVDQGTS 515

[Close]

BLAST of Carg14944 vs. NCBI nr
Match: XP_022146708.1 (polygalacturonase QRT3-like isoform X1 [Momordica charantia])

HSP 1 Score: 680.2 bits (1754), Expect = 5.1e-192
Identity = 361/518 (69.69%), Postives = 405/518 (78.19%), Query Frame = 0


Query: 1   MAKQ--SAFSFILCLPTMLLLPLLSAAPNTPSLSSPAPATHVSTRIRHYNHHLSKLHKLK 60
           MAK+  +A  F L LP MLL    SA+P+T  LSSPAPA  VS R RHYN HL+KL KLK
Sbjct: 29  MAKELAAALIFTLWLPAMLLWTSESASPSTVHLSSPAPAAQVSGRSRHYNRHLAKLQKLK 88

Query: 61  SSLSVQRDSV-------------PTDARVYHVTSYGADPTGKNDSTESILRVFSDAYGSA 120
           +SL V+RDS+             P  ARVYHVT+YGADPTG+ DSTES+LR  SDAYGS 
Sbjct: 89  ASLPVRRDSLSIAPTPTPPSFQAPGGARVYHVTAYGADPTGRVDSTESLLRALSDAYGSP 148

Query: 121 SDLSLIDGVRNLGGVQINLDGGHYLISRPLRLPGAGVGNIVIQGGSFHASDDFPSDGYLI 180
            +  L+DG+RNLGG  INLDGG+YLISRPLRLPGAGVGNIVIQGGS  ASDDFPSDGYLI
Sbjct: 149 GEGWLMDGIRNLGGAHINLDGGNYLISRPLRLPGAGVGNIVIQGGSLRASDDFPSDGYLI 208

Query: 181 ELSPS----PSAAAKIMENNKVMNSAEDASLTSSTSYNYEYITFRDLLLDCNYRGGGISI 240
           +LSPS                           SS+SYNYEYITFRDLLLD NYRGGGISI
Sbjct: 209 DLSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSSYNYEYITFRDLLLDSNYRGGGISI 268

Query: 241 VNSLRITIDNCYITHFATTGISVRGGHETYIRSSFLGQHITAGGDPGERNFSGTGISLVG 300
           +NSLR +IDNCYITHF TTGISV+ GHET+IRSSFLGQHITAG DPGERNFSGTGISL+G
Sbjct: 269 INSLRTSIDNCYITHFTTTGISVQSGHETFIRSSFLGQHITAGADPGERNFSGTGISLIG 328

Query: 301 NDNAVIDVVIFSAATXXXXXXXXXXXXXXXXXXXXXXFGGTGIYLQLPGLTQTRIVDSYM 360
           NDN+V DVV+FSAAT                      FGGTGIYL+LPGLTQTRIV+SYM
Sbjct: 329 NDNSVTDVVVFSAATAILVSGQANILTGVHCYNKATGFGGTGIYLKLPGLTQTRIVNSYM 388

Query: 361 DYTGIVAEDPVQLHISNTLFLGDAAITLKSINGVVNGLNIVDNMFSGSNAGVAIVQLDES 420
           DYTGIVAEDPVQLHISNT FLGDA+ITLKSINGVVNGLNIVDNMFSGS+ GV IV+LD+S
Sbjct: 389 DYTGIVAEDPVQLHISNTFFLGDASITLKSINGVVNGLNIVDNMFSGSDRGVPIVKLDQS 448

Query: 421 KSAFKQIDQVVIARNNVKGMQVKSTVGSAEWQGNGTSWTVDFNPVLVFPNLIRNVQYSFR 480
           KSAF++I+QVVI RNN +GMQ+KST  SAE QGNGTSW +DFNP+L+FPNLIRNVQYSFR
Sbjct: 449 KSAFREINQVVIERNNARGMQIKSTAASAESQGNGTSWIIDFNPILLFPNLIRNVQYSFR 508

Query: 481 STDSGFPKHMVRNVSDNRVVIETDVAVSGSVYARVDQG 500
           S+  GFPKH+VRNVS+NRVVIE+DVAV+GSV+A VDQG
Sbjct: 509 SSGEGFPKHVVRNVSENRVVIESDVAVAGSVFATVDQG 546

[Close]

BLAST of Carg14944 vs. TAIR10
Match: AT4G20050.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 476.5 bits (1225), Expect = 2.0e-134
Identity = 257/466 (55.15%), Postives = 315/466 (67.60%), Query Frame = 0


Query: 47  YNHHLSKLHKLKSSL-------SVQRDSVPTDA----RVYHVTSYGADPTGKNDSTESIL 106
           ++  L+++  LK+SL        V     P  A    RVY V SYGADPTGK DST++IL
Sbjct: 37  HDRALAEMQALKASLVRRNLPALVSPPPTPPQAVPGPRVYQVISYGADPTGKLDSTDAIL 96

Query: 107 RVFSDAYGSASDLSLIDGVRNLGGVQINLDGGHYLISRPLRLPGAGVGNIVIQGGSFHAS 166
           +   +A+   +   L+ G+ +LGG +I+L GG YLISRPLR P AG GN++I GG+  AS
Sbjct: 97  KAMEEAFDGPNHGVLMQGINDLGGARIDLQGGSYLISRPLRFPSAGAGNLLISGGTLRAS 156

Query: 167 DDFPSDGYLIELSPSPSAAAKIMENNKVMNSAEDASLTSSTSYNYEYITFRDLLLDCNYR 226
           +DFP D YLIEL                         +S   Y +EYIT RDLL+DCNYR
Sbjct: 157 NDFPVDRYLIELKDE----------------------SSKLQYIFEYITLRDLLIDCNYR 216

Query: 227 GGGISIVNSLRITIDNCYITHFA-TTGISVRGGHETYIRSSFLGQHITAGGDPGERNFSG 286
           GG I+++NSLR +IDNCYIT F  T GI V+ GHETYIR+SFLGQHITAGGD GER+FSG
Sbjct: 217 GGAIAVINSLRTSIDNCYITRFGDTNGILVKSGHETYIRNSFLGQHITAGGDRGERSFSG 276

Query: 287 TGISLVGNDNAVIDVVIFSAATXXXXXXXXXXXXXXXXXXXXXXFGGTGIYLQLPGLTQT 346
           T I+L+GNDNAV D VIFSA                        FGGTGIYL+LPGLTQ 
Sbjct: 277 TAINLMGNDNAVTDTVIFSARIGVMVSGQANLLSGVHCYNKATGFGGTGIYLRLPGLTQN 336

Query: 347 RIVDSYMDYTGIVAEDPVQLHISNTLFLGDAAITLKSINGVVNGLNIVDNMFSGSNAGVA 406
           RIV+SY+DYTGIVAEDPVQL IS T FLGDA I LKSI G + G++IVDNMFSGS  GV 
Sbjct: 337 RIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKSIAGYIRGVSIVDNMFSGSGHGVQ 396

Query: 407 IVQLDESKSAFKQIDQVVIARNNVKGMQVKSTVGSAEWQGNGTSWTVDFNPVLVFPNLIR 466
           IVQLD+  +AF  + QVV+ RN+V GM  KSTV      GNGTSWTVDFNPVL+FP+LI 
Sbjct: 397 IVQLDQRNTAFDDVGQVVVDRNSVNGMVEKSTVARGSVDGNGTSWTVDFNPVLLFPDLIN 456

Query: 467 NVQYSFRSTDSG-FPKHMVRNVSDNRVVIETDVAVSGSVYARVDQG 500
           +VQY+  ++++G FP H +RNVSDNRVV+ET+  V+G+VY  V+QG
Sbjct: 457 HVQYTLVASEAGVFPLHALRNVSDNRVVVETNAPVTGTVYVTVNQG 480

[Close]

BLAST of Carg14944 vs. TAIR10
Match: AT4G20040.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 368.6 bits (945), Expect = 6.0e-102
Identity = 198/421 (47.03%), Postives = 268/421 (63.66%), Query Frame = 0


Query: 73  RVYHVTSYGADPTGKNDSTESILRVFSDAYGSASDLSLIDGVRNLGGVQINLDGGHYLIS 132
           +V +   YGADPTG  DS+++IL   +DA+   + L ++  V +LGG+ I+L GG Y+I 
Sbjct: 67  KVIYPIGYGADPTGGQDSSDAILEALTDAFQLQTGLEMLPRVADLGGLVIDLQGGSYMIG 126

Query: 133 RPLRLPGAGVGNIVIQGGSFHASDDFPSDGYLIELSPSPSAAAKIMENNKVMNSAEDASL 192
           +PLR P +G GN+V++GG+F AS+ FP D +L+EL  S +     M   +  +  +D   
Sbjct: 127 KPLRFPSSGGGNLVVKGGTFRASELFPGDRHLVELVASNAKKPMKMSPEESFSDQKD--- 186

Query: 193 TSSTSYNYEYITFRDLLLDCNYRGGGISIVNSLRITIDNCYITHFATTGISVRGGHETYI 252
             S+   YE +TF+D+L D  +RGGGI +++S RI I NCY  HF T GI V+GGHETYI
Sbjct: 187 -QSSGIFYEDVTFQDVLFDSRFRGGGILVIDSARIRITNCYFLHFTTQGIKVQGGHETYI 246

Query: 253 RSSFLGQHITAGGDPGERNFSGTGISLVGNDNAVIDVVIFSAATXXXXXXXXXXXXXXXX 312
            +SFLGQH T GGD  ER F+GTGI +  NDNA+ DVVIFSA                  
Sbjct: 247 SNSFLGQHSTVGGDREERGFTGTGIDISSNDNAITDVVIFSAGIGISLNGGANMVTGVHC 306

Query: 313 XXXXXXFGGTGIYLQLPGLTQTRIVDSYMDYTGIVAEDPVQLHISNTLFLGDAAITLKSI 372
                 FGG GI ++      TRI + Y+DYTGIV EDPV +H++N LFLGDA I L+S+
Sbjct: 307 YNKATWFGGIGILVK---SHLTRIDNCYLDYTGIVIEDPVHVHVTNALFLGDANIVLRSV 366

Query: 373 NGVVNGLNIVDNMFSG-SNAGVAIVQLDESKSAFKQIDQVVIARNNVKGMQVKSTVGSAE 432
           +G ++G+NIV+NMFSG +     IV+L+     F  I+QVVI +NN +GM +KST G A 
Sbjct: 367 HGKISGVNIVNNMFSGTAKNNFPIVKLE---GEFHDINQVVIDQNNAEGMMLKSTTGKAM 426

Query: 433 WQGNGTSWTVDFNPVLVFPNLIRNVQYSFRSTDSGFPKHMVRNVSDNRVVIETDVAVSGS 492
              NGT W  DF+PVLVFPN I + Q+SF +     P + V NVS+N VV+ETD AV+G+
Sbjct: 427 VSANGTRWIADFSPVLVFPNRINHYQHSFFAQSGQIPANAVTNVSNNMVVVETDRAVTGT 477

[Close]

BLAST of Carg14944 vs. Swiss-Prot
Match: sp|O49432|QRT3_ARATH (Polygalacturonase QRT3 OS=Arabidopsis thaliana OX=3702 GN=QRT3 PE=2 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 3.7e-133
Identity = 257/466 (55.15%), Postives = 315/466 (67.60%), Query Frame = 0


Query: 47  YNHHLSKLHKLKSSL-------SVQRDSVPTDA----RVYHVTSYGADPTGKNDSTESIL 106
           ++  L+++  LK+SL        V     P  A    RVY V SYGADPTGK DST++IL
Sbjct: 37  HDRALAEMQALKASLVRRNLPALVSPPPTPPQAVPGPRVYQVISYGADPTGKLDSTDAIL 96

Query: 107 RVFSDAYGSASDLSLIDGVRNLGGVQINLDGGHYLISRPLRLPGAGVGNIVIQGGSFHAS 166
           +   +A+   +   L+ G+ +LGG +I+L GG YLISRPLR P AG GN++I GG+  AS
Sbjct: 97  KAMEEAFDGPNHGVLMQGINDLGGARIDLQGGSYLISRPLRFPSAGAGNLLISGGTLRAS 156

Query: 167 DDFPSDGYLIELSPSPSAAAKIMENNKVMNSAEDASLTSSTSYNYEYITFRDLLLDCNYR 226
           +DFP D YLIEL                         +S   Y +EYIT RDLL+DCNYR
Sbjct: 157 NDFPVDRYLIELKDE----------------------SSKLQYIFEYITLRDLLIDCNYR 216

Query: 227 GGGISIVNSLRITIDNCYITHFA-TTGISVRGGHETYIRSSFLGQHITAGGDPGERNFSG 286
           GG I+++NSLR +IDNCYIT F  T GI V+ GHETYIR+SFLGQHITAGGD GER+FSG
Sbjct: 217 GGAIAVINSLRTSIDNCYITRFGDTNGILVKSGHETYIRNSFLGQHITAGGDRGERSFSG 276

Query: 287 TGISLVGNDNAVIDVVIFSAATXXXXXXXXXXXXXXXXXXXXXXFGGTGIYLQLPGLTQT 346
           T I+L+GNDNAV D VIFSA                        FGGTGIYL+LPGLTQ 
Sbjct: 277 TAINLMGNDNAVTDTVIFSARIGVMVSGQANLLSGVHCYNKATGFGGTGIYLRLPGLTQN 336

Query: 347 RIVDSYMDYTGIVAEDPVQLHISNTLFLGDAAITLKSINGVVNGLNIVDNMFSGSNAGVA 406
           RIV+SY+DYTGIVAEDPVQL IS T FLGDA I LKSI G + G++IVDNMFSGS  GV 
Sbjct: 337 RIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKSIAGYIRGVSIVDNMFSGSGHGVQ 396

Query: 407 IVQLDESKSAFKQIDQVVIARNNVKGMQVKSTVGSAEWQGNGTSWTVDFNPVLVFPNLIR 466
           IVQLD+  +AF  + QVV+ RN+V GM  KSTV      GNGTSWTVDFNPVL+FP+LI 
Sbjct: 397 IVQLDQRNTAFDDVGQVVVDRNSVNGMVEKSTVARGSVDGNGTSWTVDFNPVLLFPDLIN 456

Query: 467 NVQYSFRSTDSG-FPKHMVRNVSDNRVVIETDVAVSGSVYARVDQG 500
           +VQY+  ++++G FP H +RNVSDNRVV+ET+  V+G+VY  V+QG
Sbjct: 457 HVQYTLVASEAGVFPLHALRNVSDNRVVVETNAPVTGTVYVTVNQG 480

[Close]

BLAST of Carg14944 vs. TrEMBL
Match: tr|A0A0A0KMC1|A0A0A0KMC1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G526410 PE=4 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 9.0e-193
Identity = 383/516 (74.22%), Postives = 435/516 (84.30%), Query Frame = 0


Query: 2   AKQSAFSFILCLPTMLLLPLLSAA-PNTPSLSSPAPATHVS-TRIRHYNHHLSKLHKLKS 61
           +K   F  +L LP   +LP LS+A P+  S SSPAP TH S     HY+ H S L KLKS
Sbjct: 3   SKPLLFFILLSLP---ILPFLSSATPSLDSHSSPAPPTHFSGGSSSHYHRHFSNLRKLKS 62

Query: 62  SLSVQRDSV------------PTDARVYHVTSYGADPTGKNDSTESILRVFSDAYGSASD 121
           SLSV+ +S             P+ ARVYHVTSYGADPTGK DST+S+L+ FSD Y S  +
Sbjct: 63  SLSVRHESAPSAPNPSFITTPPSGARVYHVTSYGADPTGKTDSTDSLLKAFSDVYNSNGE 122

Query: 122 LSLIDGVRNLGGVQINLDGGHYLISRPLRLPGAGVGNIVIQGGSFHASDDFPSDGYLIEL 181
            SL++G++NLGGVQINLDGG+++ISRPLRLPG GVGN+VI GGS  ASDDFPSDGYLIEL
Sbjct: 123 GSLMEGIKNLGGVQINLDGGNFMISRPLRLPGVGVGNVVIHGGSLRASDDFPSDGYLIEL 182

Query: 182 SPSPSAAAKIMENNKVMN-SAEDASLTSS-TSYNYEYITFRDLLLDCNYRGGGISIVNSL 241
           S S SA     +N K +N S++DA L SS +SYNYEYI+F+DLLLD N+RGGGIS++NSL
Sbjct: 183 SSSSSAPKNSFDNQKTINSSSQDAILISSPSSYNYEYISFKDLLLDSNFRGGGISVLNSL 242

Query: 242 RITIDNCYITHFATTGISVRGGHETYIRSSFLGQHITAGGDPGERNFSGTGISLVGNDNA 301
           RITIDNCYITHF T GISV+GGHETYIRSSFLGQHITAGGDPGERNFSGTGISL+GNDNA
Sbjct: 243 RITIDNCYITHFTTIGISVQGGHETYIRSSFLGQHITAGGDPGERNFSGTGISLLGNDNA 302

Query: 302 VIDVVIFSAATXXXXXXXXXXXXXXXXXXXXXXFGGTGIYLQLPGLTQTRIVDSYMDYTG 361
           V DVVIFSAA XXXXXXXXXXXXXXXXXXXXXXFGGTGIYLQLPGLTQTRI++SYMDYTG
Sbjct: 303 VTDVVIFSAAXXXXXXXXXXXXXXXXXXXXXXXFGGTGIYLQLPGLTQTRILNSYMDYTG 362

Query: 362 IVAEDPVQLHISNTLFLGDAAITLKSINGVVNGLNIVDNMFSGSNAGVAIVQLDESKSAF 421
           IVAEDPVQL I+NT FLGD+ ITLKS+NGV +G+NIVDNMFSGS+ GVAIVQLDESKSAF
Sbjct: 363 IVAEDPVQLQIANTFFLGDSYITLKSMNGVASGVNIVDNMFSGSDKGVAIVQLDESKSAF 422

Query: 422 KQIDQVVIARNNVKGMQVKSTVGSAEWQGNGTSWTVDFNPVLVFPNLIRNVQYSFRSTDS 481
           KQ+DQVV+ RNNV+GMQ KSTVGSAE +GNGTSW +DFNPVL+FPNLI+NVQY+FRS D+
Sbjct: 423 KQVDQVVVERNNVRGMQAKSTVGSAELEGNGTSWVLDFNPVLLFPNLIKNVQYTFRSIDN 482

Query: 482 GFPKHMVRNVSDNRVVIETDVAVSGSVYARVDQGQS 502
           GFPKH+VRNVSDNRVVIETDVAV GSV+ARVDQG S
Sbjct: 483 GFPKHIVRNVSDNRVVIETDVAVVGSVFARVDQGTS 515

[Close]

BLAST of Carg14944 vs. TrEMBL
Match: tr|A0A1S3AYU3|A0A1S3AYU3_CUCME (polygalacturonase QRT3-like OS=Cucumis melo OX=3656 GN=LOC103484272 PE=4 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 4.3e-187
Identity = 382/519 (73.60%), Postives = 426/519 (82.08%), Query Frame = 0


Query: 1   MAKQSAFSFILCLPTMLLLPLLSAAPNTPSLS----SPAPATHVS-TRIRHYNHHLSKLH 60
           MA +    FI  L ++   P LS A  +PSL     SPAPATH S  R  HY+ H S L 
Sbjct: 3   MASKPLLFFI--LSSLPFFPFLSTA--SPSLDYSYPSPAPATHFSGGRSSHYHRHFSNLR 62

Query: 61  KLKSSLSVQRDSV----------PTDARVYHVTSYGADPTGKNDSTESILRVFSDAYGSA 120
           KLKSSLSV+ DS           P+ ARVYHVTSYGADPTGK DSTES+L+ FSD Y S 
Sbjct: 63  KLKSSLSVRHDSAISAPSPSFTPPSGARVYHVTSYGADPTGKTDSTESLLQAFSDVYNSN 122

Query: 121 SDLSLIDGVRNLGGVQINLDGGHYLISRPLRLPGAGVGNIVIQGGSFHASDDFPSDGYLI 180
            + SL+DG+RNLGGVQINLDGG++LISRPLRLPG GVGN++I GGS  ASDDFPSDGYLI
Sbjct: 123 GEGSLMDGIRNLGGVQINLDGGNFLISRPLRLPGVGVGNVMIHGGSLRASDDFPSDGYLI 182

Query: 181 ELSPSPSAAAKIMENNKVMN--SAEDASLTS-STSYNYEYITFRDLLLDCNYRGGGISIV 240
           EL  S S+AAK   N K +N  S  DA LTS   SY+YEYI+F+DLLLD N+RGGGIS++
Sbjct: 183 EL--SSSSAAKNFNNQKTINNSSTHDAILTSXXXSYSYEYISFKDLLLDSNFRGGGISVI 242

Query: 241 NSLRITIDNCYITHFATTGISVRGGHETYIRSSFLGQHITAGGDPGERNFSGTGISLVGN 300
           NSLRITIDNCYITHF T GISV+GGHE YIR+SFLGQHITAGGDPGERNFSGTGISLVGN
Sbjct: 243 NSLRITIDNCYITHFTTIGISVQGGHEAYIRTSFLGQHITAGGDPGERNFSGTGISLVGN 302

Query: 301 DNAVIDVVIFSAATXXXXXXXXXXXXXXXXXXXXXXFGGTGIYLQLPGLTQTRIVDSYMD 360
           DNA+ DVVIFSA  XXXXXXXXXXXXXXXXXXXXXX   TGIYLQLPGLTQTRI++SYMD
Sbjct: 303 DNAITDVVIFSAXXXXXXXXXXXXXXXXXXXXXXXXXXXTGIYLQLPGLTQTRILNSYMD 362

Query: 361 YTGIVAEDPVQLHISNTLFLGDAAITLKSINGVVNGLNIVDNMFSGSNAGVAIVQLDESK 420
           YTGIVAEDPVQL I NT FLGD+ ITLKSINGV +G+NIVDNMFSGS+ GVAIVQLDESK
Sbjct: 363 YTGIVAEDPVQLQIVNTFFLGDSYITLKSINGVASGVNIVDNMFSGSDKGVAIVQLDESK 422

Query: 421 SAFKQIDQVVIARNNVKGMQVKSTVGSAEWQGNGTSWTVDFNPVLVFPNLIRNVQYSFRS 480
           SAFKQIDQV + RNNVKGMQ KSTVGSAE +GNGTSW +DFNPVL+FPNLI+NVQY+FRS
Sbjct: 423 SAFKQIDQVAVERNNVKGMQAKSTVGSAELEGNGTSWVLDFNPVLLFPNLIKNVQYTFRS 482

Query: 481 TDSGFPKHMVRNVSDNRVVIETDVAVSGSVYARVDQGQS 502
           +D+GFPKH+VRNVSDN+VVIETDVAV GSV+A VDQG S
Sbjct: 483 SDNGFPKHIVRNVSDNQVVIETDVAVVGSVFATVDQGMS 515

[Close]

BLAST of Carg14944 vs. TrEMBL
Match: tr|E5GCM0|E5GCM0_CUCME (Polygalacturonase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 4.3e-187
Identity = 382/519 (73.60%), Postives = 426/519 (82.08%), Query Frame = 0


Query: 1   MAKQSAFSFILCLPTMLLLPLLSAAPNTPSLS----SPAPATHVS-TRIRHYNHHLSKLH 60
           MA +    FI  L ++   P LS A  +PSL     SPAPATH S  R  HY+ H S L 
Sbjct: 3   MASKPLLFFI--LSSLPFFPFLSTA--SPSLDYSYPSPAPATHFSGGRSSHYHRHFSNLR 62

Query: 61  KLKSSLSVQRDSV----------PTDARVYHVTSYGADPTGKNDSTESILRVFSDAYGSA 120
           KLKSSLSV+ DS           P+ ARVYHVTSYGADPTGK DSTES+L+ FSD Y S 
Sbjct: 63  KLKSSLSVRHDSAISAPSPSFTPPSGARVYHVTSYGADPTGKTDSTESLLQAFSDVYNSN 122

Query: 121 SDLSLIDGVRNLGGVQINLDGGHYLISRPLRLPGAGVGNIVIQGGSFHASDDFPSDGYLI 180
            + SL+DG+RNLGGVQINLDGG++LISRPLRLPG GVGN++I GGS  ASDDFPSDGYLI
Sbjct: 123 GEGSLMDGIRNLGGVQINLDGGNFLISRPLRLPGVGVGNVMIHGGSLRASDDFPSDGYLI 182

Query: 181 ELSPSPSAAAKIMENNKVMN--SAEDASLTS-STSYNYEYITFRDLLLDCNYRGGGISIV 240
           EL  S S+AAK   N K +N  S  DA LTS   SY+YEYI+F+DLLLD N+RGGGIS++
Sbjct: 183 EL--SSSSAAKNFNNQKTINNSSTHDAILTSXXXSYSYEYISFKDLLLDSNFRGGGISVI 242

Query: 241 NSLRITIDNCYITHFATTGISVRGGHETYIRSSFLGQHITAGGDPGERNFSGTGISLVGN 300
           NSLRITIDNCYITHF T GISV+GGHE YIR+SFLGQHITAGGDPGERNFSGTGISLVGN
Sbjct: 243 NSLRITIDNCYITHFTTIGISVQGGHEAYIRTSFLGQHITAGGDPGERNFSGTGISLVGN 302

Query: 301 DNAVIDVVIFSAATXXXXXXXXXXXXXXXXXXXXXXFGGTGIYLQLPGLTQTRIVDSYMD 360
           DNA+ DVVIFSA  XXXXXXXXXXXXXXXXXXXXXX   TGIYLQLPGLTQTRI++SYMD
Sbjct: 303 DNAITDVVIFSAXXXXXXXXXXXXXXXXXXXXXXXXXXXTGIYLQLPGLTQTRILNSYMD 362

Query: 361 YTGIVAEDPVQLHISNTLFLGDAAITLKSINGVVNGLNIVDNMFSGSNAGVAIVQLDESK 420
           YTGIVAEDPVQL I NT FLGD+ ITLKSINGV +G+NIVDNMFSGS+ GVAIVQLDESK
Sbjct: 363 YTGIVAEDPVQLQIVNTFFLGDSYITLKSINGVASGVNIVDNMFSGSDKGVAIVQLDESK 422

Query: 421 SAFKQIDQVVIARNNVKGMQVKSTVGSAEWQGNGTSWTVDFNPVLVFPNLIRNVQYSFRS 480
           SAFKQIDQV + RNNVKGMQ KSTVGSAE +GNGTSW +DFNPVL+FPNLI+NVQY+FRS
Sbjct: 423 SAFKQIDQVAVERNNVKGMQAKSTVGSAELEGNGTSWVLDFNPVLLFPNLIKNVQYTFRS 482

Query: 481 TDSGFPKHMVRNVSDNRVVIETDVAVSGSVYARVDQGQS 502
           +D+GFPKH+VRNVSDN+VVIETDVAV GSV+A VDQG S
Sbjct: 483 SDNGFPKHIVRNVSDNQVVIETDVAVVGSVFATVDQGMS 515

[Close]

BLAST of Carg14944 vs. TrEMBL
Match: tr|A0A2I4GB95|A0A2I4GB95_9ROSI (polygalacturonase QRT3-like OS=Juglans regia OX=51240 GN=LOC109006367 PE=4 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 1.8e-153
Identity = 289/473 (61.10%), Postives = 340/473 (71.88%), Query Frame = 0


Query: 46  HYNHHLSKLHKLKSSLSVQRDSV-------------------PTDARVYHVTSYGADPTG 105
           HY+  + K+  L+SS SV+ DSV                    +  RVYHVT+YGADPTG
Sbjct: 40  HYHDQIRKMQALRSS-SVRHDSVSLAPPSISPSPSYAQQPPAASSPRVYHVTTYGADPTG 99

Query: 106 KNDSTESILRVFSDAYGSASDLSLIDGVRNLGGVQINLDGGHYLISRPLRLPGAGVGNIV 165
           + DSTE++LR  SDA    S  SLI+G++NLGG QINL+GG+YLISRPLRLP  GVGN+ 
Sbjct: 100 REDSTEALLRAISDAVQGPSAGSLIEGIQNLGGAQINLEGGNYLISRPLRLPATGVGNLK 159

Query: 166 IQGGSFHASDDFPSDGYLIELSPSPSAAAKIMENNKVMNSAEDASLTSSTSYNYEYITFR 225
           I GG+  ASDDFP+DGYLI+LS S ++  +     K   S +   L+SS+ Y+YEYIT R
Sbjct: 160 IHGGTLRASDDFPTDGYLIDLSASSTSNME----EKRERSKDSQQLSSSSPYSYEYITLR 219

Query: 226 DLLLDCNYRGGGISIVNSLRITIDNCYITHFATTGISVRGGHETYIRSSFLGQHITAGGD 285
           DL+LD NYRGGG +++NSLR +IDNCYITHF T GI VRGGHETYIR+SFLGQHITAGGD
Sbjct: 220 DLMLDSNYRGGGAAVINSLRTSIDNCYITHFTTNGILVRGGHETYIRNSFLGQHITAGGD 279

Query: 286 PGERNFSGTGISLVGNDNAVIDVVIFSAATXXXXXXXXXXXXXXXXXXXXXXFGGTGIYL 345
            GERNFSGT ISL+GNDNAV DVVIFSAA                       FGGTGIYL
Sbjct: 280 HGERNFSGTAISLMGNDNAVTDVVIFSAAIGIMVSGQANILSGVHCYNKATGFGGTGIYL 339

Query: 346 QLPGLTQTRIVDSYMDYTGIVAEDPVQLHISNTLFLGDAAITLKSINGVVNGLNIVDNMF 405
           +LPGLTQTRIV+SY+DYTGIVAEDPVQLHISNT FLGDA I LKSINGV + +NIVDNMF
Sbjct: 340 KLPGLTQTRIVNSYLDYTGIVAEDPVQLHISNTFFLGDAYIVLKSINGVAHAVNIVDNMF 399

Query: 406 SGSNAGVAIVQLDESKSAFKQIDQVVIARNNVKGMQVKSTVGSAEWQGNGTSWTVDFNPV 465
            G + GV IVQLD++   FK I+QVV+ RNNV+GM +KSTV      G G SW VDFN V
Sbjct: 400 CGFDKGVEIVQLDQTNGPFKDIEQVVVDRNNVRGMNIKSTVARGSVNGKGNSWVVDFNHV 459

Query: 466 LVFPNLIRNVQYSFRSTDSGFPKHMVRNVSDNRVVIETDVAVSGSVYARVDQG 500
           L+FPNLIRNVQYS  +T S FP H +RN+SDNRV I+TD+ V  SVY   DQG
Sbjct: 460 LLFPNLIRNVQYSLSATGSQFPNHALRNISDNRVEIQTDLDVPASVYVTADQG 507

[Close]

BLAST of Carg14944 vs. TrEMBL
Match: tr|A0A061DXP8|A0A061DXP8_THECC (Pectin lyase-like superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_006007 PE=4 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 9.1e-153
Identity = 291/476 (61.13%), Postives = 352/476 (73.95%), Query Frame = 0


Query: 46  HYNHHLSKLHKLKSSLSVQRDSVPTDA------------------RVYHVTSYGADPTGK 105
           HY   + +L   K+SL + RDSV   A                  RVY VT YGADPTGK
Sbjct: 40  HYYEQMRQLQAFKASL-IGRDSVSGSAISPSLSSARQLQAAASVPRVYQVTKYGADPTGK 99

Query: 106 NDSTESILRVFSDAYGSASDLS--LIDGVRNLGGVQINLDGGHYLISRPLRLPGAGVGNI 165
            DSTE++ +  +DA+ S  + S  L+DG+ NLGG QINL+GG+YLIS+PLRLP AG GN 
Sbjct: 100 ADSTEALNKAIADAFQSPGEGSWTLMDGITNLGGPQINLEGGNYLISKPLRLPSAGAGNF 159

Query: 166 VIQGGSFHASDDFPSDGYLIELSPSPSAAAKIMENNKVMNSAEDASLTSSTSYNYEYITF 225
           +I GG+  ASDDFP+DGYLI+LS +PSA+++  E N+   S+ ++ L SS+SYNYEYIT 
Sbjct: 160 MIHGGTLRASDDFPADGYLIDLS-APSASSQ--EGNE--RSSLNSQLASSSSYNYEYITL 219

Query: 226 RDLLLDCNYRGGGISIVNSLRITIDNCYITHFATTGISVRGGHETYIRSSFLGQHITAGG 285
           +DL+LD NYRGGGIS+VNSLR +IDNCYI  F T GI V+GGHETYIR+SFLGQHITAGG
Sbjct: 220 KDLMLDSNYRGGGISVVNSLRTSIDNCYIARFTTNGILVQGGHETYIRNSFLGQHITAGG 279

Query: 286 DPGERNFSGTGISLVGNDNAVIDVVIFSAATXXXXXXXXXXXXXXXXXXXXXXFGGTGIY 345
           D GERNFSGT I+L+GNDNAV DVVIFSAA                        GGTGIY
Sbjct: 280 DGGERNFSGTAINLMGNDNAVTDVVIFSAAVGIMVSGQANTFSGVHCYNKATGLGGTGIY 339

Query: 346 LQLPGLTQTRIVDSYMDYTGIVAEDPVQLHISNTLFLGDAAITLKSINGVVNGLNIVDNM 405
           L+LPG TQTRIV+SYMDYTGIVAEDPVQLHIS++ FLGDA + LKSINGV NG+NIVDNM
Sbjct: 340 LKLPGQTQTRIVNSYMDYTGIVAEDPVQLHISSSFFLGDAFVLLKSINGVANGVNIVDNM 399

Query: 406 FSGSNAGVAIVQLDESKSAFKQIDQVVIARNNVKGMQVKSTVGSAEWQGNGTSWTVDFNP 465
           FSGSN GV IVQLD+S   FK+IDQVV+ RNNV+GM +K+TV     +GNG+SWTVDFNP
Sbjct: 400 FSGSNNGVQIVQLDQSNGPFKEIDQVVVDRNNVEGMNLKATVARVAVEGNGSSWTVDFNP 459

Query: 466 VLVFPNLIRNVQYSFRSTDSGFPKHMVRNVSDNRVVIETDVAVSGSVYARVDQGQS 502
           +L+FPNLI++VQYS  ++ S FP H +RNVS+NRVVIE+DVA   +V+  VDQG S
Sbjct: 460 ILLFPNLIKHVQYSLTTSGSSFPNHALRNVSENRVVIESDVAAPANVFVTVDQGAS 509

The following BLAST results are available for this feature:

BLAST of Carg14944 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926516.1	2.8e-262	98.40	polygalacturonase QRT3-like [Cucurbita moschata]	[more]
XP_023517548.1	3.7e-259	97.21	polygalacturonase QRT3-like [Cucurbita pepo subsp. pepo]	[more]
XP_023003036.1	9.2e-258	92.22	polygalacturonase QRT3-like [Cucurbita maxima]	[more]
XP_004134539.1	1.4e-192	74.22	PREDICTED: polygalacturonase QRT3-like [Cucumis sativus] >KGN49507.1 hypothetica...	[more]
XP_022146708.1	5.1e-192	69.69	polygalacturonase QRT3-like isoform X1 [Momordica charantia]	[more]

BLAST of Carg14944 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G20050.1	2.0e-134	55.15	Pectin lyase-like superfamily protein	[more]
AT4G20040.1	6.0e-102	47.03	Pectin lyase-like superfamily protein	[more]

BLAST of Carg14944 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O49432\|QRT3_ARATH	3.7e-133	55.15	Polygalacturonase QRT3 OS=Arabidopsis thaliana OX=3702 GN=QRT3 PE=2 SV=1	[more]

BLAST of Carg14944 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KMC1\|A0A0A0KMC1_CUCSA	9.0e-193	74.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G526410 PE=4 SV=1	[more]
tr\|A0A1S3AYU3\|A0A1S3AYU3_CUCME	4.3e-187	73.60	polygalacturonase QRT3-like OS=Cucumis melo OX=3656 GN=LOC103484272 PE=4 SV=1	[more]
tr\|E5GCM0\|E5GCM0_CUCME	4.3e-187	73.60	Polygalacturonase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A2I4GB95\|A0A2I4GB95_9ROSI	1.8e-153	61.10	polygalacturonase QRT3-like OS=Juglans regia OX=51240 GN=LOC109006367 PE=4 SV=1	[more]
tr\|A0A061DXP8\|A0A061DXP8_THECC	9.1e-153	61.13	Pectin lyase-like superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TC...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004650	polygalacturonase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011050	Pectin_lyase_fold/virulence
IPR039279	QRT3-like
IPR012334	Pectin_lyas_fold
IPR006626	PbH1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004650	polygalacturonase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14944-RA	Carg14944-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 200..223 e-value: 8400.0 score: 0.6 coord: 224..246 e-value: 2.1 score: 17.4 coord: 281..302 e-value: 840.0 score: 7.8 coord: 142..167 e-value: 3400.0 score: 3.4 coord: 376..397 e-value: 740.0 score: 8.1
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 75..462 e-value: 7.8E-20 score: 73.2
IPR039279	Polygalacturonase QRT3-like	PANTHER	PTHR33928	FAMILY NOT NAMED	coord: 41..500
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	SSF51126	Pectin lyase-like	coord: 356..428 coord: 18..24 coord: 67..326

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg14944	Cla009870	Watermelon (97103) v1	carwmB0730
Carg14944	Csa6G526410	Cucumber (Chinese Long) v2	carcuB0748
Carg14944	MELO3C007031	Melon (DHL92) v3.5.1	carmeB0725
Carg14944	ClCG01G025540	Watermelon (Charleston Gray)	carwcgB0707
Carg14944	CSPI06G37300	Wild cucumber (PI 183967)	carcpiB0764
Carg14944	Cucsa.048680	Cucumber (Gy14) v1	carcgyB0822
Carg14944	CmaCh07G000310	Cucurbita maxima (Rimu)	carcmaB1024
Carg14944	CmoCh07G000330	Cucurbita moschata (Rifu)	carcmoB0996
Carg14944	Lsi01G000420	Bottle gourd (USVL1VR-Ls)	carlsiB669
Carg14944	Cp4.1LG19g05530	Cucurbita pepo (Zucchini)	carcpeB1029
Carg14944	CsGy6G036660	Cucumber (Gy14) v2	carcgybB0726
Carg14944	MELO3C007031.2	Melon (DHL92) v3.6.1	carmedB0736
Carg14944	CsaV3_6G052790	Cucumber (Chinese Long) v3	carcucB0767
Carg14944	Cla97C01G025690	Watermelon (97103) v2	carwmbB0764

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg14944	Wax gourd	carwgoB0863
Carg14944	Cucurbita maxima (Rimu)	carcmaB1023
Carg14944	Cucurbita moschata (Rifu)	carcmoB0995
Carg14944	Cucurbita pepo (Zucchini)	carcpeB1028