Carg14852 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGGCAGCGCCATTCTTGAGAGCCCAACGGACGCGGCAAAATGGCTTCGTCCCTTTGCTTCCAGTTACACACTTGCTCCCAGCTTCGTTGCATTGCTGCTGCGAAGGCGGCAGCGGCAGCGGCGCCGTCGAGCGTCGCAACAGCAAACCGAACGTTATCTCTGTTAGTAAAACGACCATTTCTTCAATCCTTCTGTTTACCATCGGGCTCTTCCGCCGAGCTTTGCGAGCGGCAACAACTCCGGAGTCCGGAACTTGTGGCGTTGGAATATGCGGACCTTAATCTCTCTCACAAGATCTTCGAGGTTTGTTTTCTGTTCGTGAATTTTGCCCTTGATTTCTGAAATCGTTGGCGAGTAATTGAAAATTGAATGTGGTGACTAGAATTGATGTGCATTTGACTTGGTTTTGGGAATTGCAGGATTCAGGTCACGTCAGAATCAGGCAGCATGTTAATCCACTTAGCTCTTCTTTCTCTGTATGTAATTTGAGTTTTGAAAGTGGATTTGGTTTCTCTCTGATGAGAAATTTTAGGAGCTGTGGCTTTGAAATTTTAGCTTAGTGTTGCTTAATTGAAGGAAAAGCTCTATCTCTTTTACCTTTCAGGTCCCTACACCAGCACCTAACTGGGATGAAGTCTTCAAGGACCCCACGTTGCCCCTCATGGTCGATATAGGAAGTGGTGAGTGAGCTGATGCATTCCCTGTTATATACCTCTTACATATCTGTTTTCTTCATAATAGCTACTTTCTTAGTACATACTTCGCTTTCACGAGATAATATTTGATTCTGTGTAGCATTTGGCTGAATCCATATTCCTAAAATCGTTTTTAACTTGCTTTTGATTTCTAAGTCAATCCTCAGTCGTTGAAAATCAGTTTTGATGACATGAAAATTGTAACAGCCCAATCCCACCCCCACCGATAGTAGATACTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGTTTTTAAAATGCGTCGGGTAATGAGAAGTTTCCACACCCTTATAAAAAATGTTTCGTTCTCCTCCCCAACCGATGTGGGACCTCACAATCCATCCCTTTTCGGGGCACAGCATCCTTGCCGCACACCACCTTGTGTCCACCCCCTTCGGGGTCTAACATCCTTGCTGGTACACCACCTTGTGTCCACCCCCCTTCGGGGCTCAGTCTCCTCGTTGGCACATCGCCTGATGTCTGGCTCTGATACCATTTGTAACAACCCAAGTCCACCGCTAGCAAATATTATCCTCTTTGAGCTTTTTCCCTTTCGGGCTTTCCCTCAATATTCTTAAAATGCGTATGCTAGGGAGAGGTTTCCACGCCCTTATAAAGAATAATTCGTTCTCCTCCCTAACCGACGTGGGATCTTACAAAAATAATGTTTAAAAGTGTATTATTTCATTTTGAATGGTTAAACTCATGTTTAGGAGTGATTTTAACCATCACTGATATTGCTTATATTATAATTAGAATCTTACCCATAATCCTCCTGCTTTGGCCAAATAGAGGATAGCCATGAACAAGTGTTTGATGCTACTGCTTGATTTTGAAAACAAGTTCAAAACATAATTTAGAGATCCTACCATTTGCTCAATCTGTTTGGTGATGTTCATTGAACCAGCATGAAGAAGGAAATATTATCCTAAAGCATCATATTGATTACTGCATTCAAAGATCATCTTTACCGTGCACTGTAAATCAAAATTTATCTCGATATGCGTTATAAAACAGCTCTAATCATGTAATCAATACGTTACATGTCGAGCAAAATGCTCCAAGCAATAGCAGCAACGAGCTCGCTAGTAAACATTAAGTTTAATACAATGTAGTCGCCTAAGTCGCTCTGGAGAATTTACACAGGAAAGAATTCTGTTGGTAATGATATTAAGGTTTCAAATGCTAATTGCCTATAGTATCGTATTGTATTCACATGCAAGAAAATAATTTATCAGATTAAGACATGCATGCTGTAATTGTTAGTCGTGAGTCCCGCGTTGGCTAATTTAGGGAATGATCATGGGTTTATAAGTAAAGGAATACATTTCCATTGGTATGAGGCGTTTTGGGAAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGATAATATCATACCATTGTTGGGAGTCGTGATTCCTAACAATAATGATTTACGTAACATCTTTACTTTCATGCATTTTTAAGAATTCATGAGACAATTTAATGCCTTTGATTTCCAATCAAGAATCTAACAGAACAAGTATTCCTATTCCCAGGTAGTGGTAGATTTCTCTTGTGGCTTGCAAAAAAACATCTTGATTCAAGAAATTTCTTGGGTCTCGAAATACGACAGAAAGTACGGGACCGAAAATTTTCACTTTTGATGCACCCTTAGTTGGTCTGAACTATTTTATCCTCGTTCTATCGAGGCATTATATCGTGCTTTGATTCCTTACGTGCTCTTGCAGTTGGTCAAGCGTGCCGATGTCTGGGTCAAAGAGTTGGGATTTAACAATGTGTAAGGACCTTAACTTCATAGCAGGTAGTGAAAAACAAGATCACCTTTTTGCTATTGGTACATTAGTAATGAACTTCTTCTTGAACTTGAATGCAGACATTTCATGTTTGCAAATGCTACAATTTCTTTTAAACAGATAATATCTTCTTATCCTGGACCCCTGATGCTGGTTTCCATATTGGTTAGTGCAACCCCCCCTCCCCGAACGATTCAACCCGAACTTTCTCATTGAATATCAACGAAGATAGAACTCACTCGTGCTTAATCTTGTCACAGTGCCCAGATCCCCATTTCAAGAAACGACATCATAAGCGACGGGTTTTGCAGAAGCCATTAGTAGATTCTATAATAGACAGTTTAATGCCAGGAGGGCAGGTATATGATCTGCCAATCCATGACATTCAATGGTTTTTTTTGCCTGTTTGATGAGTCCGATGCTGGAAATTTTGTTGTATATGATTCAACAGGTGTTCATACAATCCGACGTGCTCGAAGTGGCAGTTGACATGAGACTTTGGTTCGATTCTGTTCCCGATGTTTTGAAACACGTCGACGTGCTCGACCAGAGTCTTTTGTGTGATAAAGAGGGATGGTTATTGAAGAATCCAATGGGAATAAGGACTGAAAGAGAAGTTCACGCTGAATCCGAAGGTGCGAACATTTACAGAAGAATGTATCAGAAGTATGTTTGCATTTGAGTCATCATTCACTGTTTTTTTTTTTTTTTGTTCTTTTCTAGAAATATATTTATTGCATCTTTATAATT CGGCAGCGCCATTCTTGAGAGCCCAACGGACGCGGCAAAATGGCTTCGTCCCTTTGCTTCCAGTTACACACTTGCTCCCAGCTTCGTTGCATTGCTGCTGCGAAGGCGGCAGCGGCAGCGGCGCCGTCGAGCGTCGCAACAGCAAACCGAACGTTATCTCTGTTAGTAAAACGACCATTTCTTCAATCCTTCTGTTTACCATCGGGCTCTTCCGCCGAGCTTTGCGAGCGGCAACAACTCCGGAGTCCGGAACTTGTGGCGTTGGAATATGCGGACCTTAATCTCTCTCACAAGATCTTCGAGGATTCAGGTCACGTCAGAATCAGGCAGCATGTTAATCCACTTAGCTCTTCTTTCTCTGTCCCTACACCAGCACCTAACTGGGATGAAGTCTTCAAGGACCCCACGTTGCCCCTCATGGTCGATATAGGAAGTGGTAGTGGTAGATTTCTCTTGTGGCTTGCAAAAAAACATCTTGATTCAAGAAATTTCTTGGGTCTCGAAATACGACAGAAATTGGTCAAGCGTGCCGATGTCTGGGTCAAAGAGTTGGGATTTAACAATGTACATTTCATGTTTGCAAATGCTACAATTTCTTTTAAACAGATAATATCTTCTTATCCTGGACCCCTGATGCTGGTTTCCATATTGTGCCCAGATCCCCATTTCAAGAAACGACATCATAAGCGACGGGTTTTGCAGAAGCCATTAGTAGATTCTATAATAGACAGTTTAATGCCAGGAGGGCAGGTGTTCATACAATCCGACGTGCTCGAAGTGGCAGTTGACATGAGACTTTGGTTCGATTCTGTTCCCGATGTTTTGAAACACGTCGACGTGCTCGACCAGAGTCTTTTGTGTGATAAAGAGGGATGGTTATTGAAGAATCCAATGGGAATAAGGACTGAAAGAGAAGTTCACGCTGAATCCGAAGGTGCGAACATTTACAGAAGAATGTATCAGAAGTATGTTTGCATTTGAGTCATCATTCACTGTTTTTTTTTTTTTTTGTTCTTTTCTAGAAATATATTTATTGCATCTTTATAATT ATGGCTTCGTCCCTTTGCTTCCAGTTACACACTTGCTCCCAGCTTCGTTGCATTGCTGCTGCGAAGGCGGCAGCGGCAGCGGCGCCGTCGAGCGTCGCAACAGCAAACCGAACGTTATCTCTGTTAGTAAAACGACCATTTCTTCAATCCTTCTGTTTACCATCGGGCTCTTCCGCCGAGCTTTGCGAGCGGCAACAACTCCGGAGTCCGGAACTTGTGGCGTTGGAATATGCGGACCTTAATCTCTCTCACAAGATCTTCGAGGATTCAGGTCACGTCAGAATCAGGCAGCATGTTAATCCACTTAGCTCTTCTTTCTCTGTCCCTACACCAGCACCTAACTGGGATGAAGTCTTCAAGGACCCCACGTTGCCCCTCATGGTCGATATAGGAAGTGGTAGTGGTAGATTTCTCTTGTGGCTTGCAAAAAAACATCTTGATTCAAGAAATTTCTTGGGTCTCGAAATACGACAGAAATTGGTCAAGCGTGCCGATGTCTGGGTCAAAGAGTTGGGATTTAACAATGTACATTTCATGTTTGCAAATGCTACAATTTCTTTTAAACAGATAATATCTTCTTATCCTGGACCCCTGATGCTGGTTTCCATATTGTGCCCAGATCCCCATTTCAAGAAACGACATCATAAGCGACGGGTTTTGCAGAAGCCATTAGTAGATTCTATAATAGACAGTTTAATGCCAGGAGGGCAGGTGTTCATACAATCCGACGTGCTCGAAGTGGCAGTTGACATGAGACTTTGGTTCGATTCTGTTCCCGATGTTTTGAAACACGTCGACGTGCTCGACCAGAGTCTTTTGTGTGATAAAGAGGGATGGTTATTGAAGAATCCAATGGGAATAAGGACTGAAAGAGAAGTTCACGCTGAATCCGAAGGTGCGAACATTTACAGAAGAATGTATCAGAAGTATGTTTGCATTTGA MASSLCFQLHTCSQLRCIAAAKAAAAAAPSSVATANRTLSLLVKRPFLQSFCLPSGSSAELCERQQLRSPELVALEYADLNLSHKIFEDSGHVRIRQHVNPLSSSFSVPTPAPNWDEVFKDPTLPLMVDIGSGSGRFLLWLAKKHLDSRNFLGLEIRQKLVKRADVWVKELGFNNVHFMFANATISFKQIISSYPGPLMLVSILCPDPHFKKRHHKRRVLQKPLVDSIIDSLMPGGQVFIQSDVLEVAVDMRLWFDSVPDVLKHVDVLDQSLLCDKEGWLLKNPMGIRTEREVHAESEGANIYRRMYQKYVCI
BLAST of Carg14852 vs. NCBI nr
Match: XP_023527130.1 (uncharacterized protein LOC111790461 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 609.8 bits (1571), Expect = 5.3e-171 Identity = 299/313 (95.53%), Postives = 302/313 (96.49%), Query Frame = 0
BLAST of Carg14852 vs. NCBI nr
Match: XP_022924717.1 (uncharacterized protein LOC111432133 [Cucurbita moschata]) HSP 1 Score: 606.3 bits (1562), Expect = 5.9e-170 Identity = 309/313 (98.72%), Postives = 312/313 (99.68%), Query Frame = 0
BLAST of Carg14852 vs. NCBI nr
Match: XP_022980361.1 (uncharacterized protein LOC111479752 [Cucurbita maxima]) HSP 1 Score: 602.8 bits (1553), Expect = 6.5e-169 Identity = 307/313 (98.08%), Postives = 310/313 (99.04%), Query Frame = 0
BLAST of Carg14852 vs. NCBI nr
Match: XP_022146903.1 (uncharacterized protein LOC111015991 [Momordica charantia]) HSP 1 Score: 522.7 bits (1345), Expect = 8.6e-145 Identity = 258/312 (82.69%), Postives = 277/312 (88.78%), Query Frame = 0
BLAST of Carg14852 vs. NCBI nr
Match: XP_008438199.1 (PREDICTED: tRNA (guanine-N(7)-)-methyltransferase [Cucumis melo]) HSP 1 Score: 521.2 bits (1341), Expect = 2.5e-144 Identity = 256/309 (82.85%), Postives = 276/309 (89.32%), Query Frame = 0
BLAST of Carg14852 vs. TAIR10
Match: AT5G17660.1 (tRNA (guanine-N-7) methyltransferase) HSP 1 Score: 369.0 bits (946), Expect = 2.9e-102 Identity = 177/256 (69.14%), Postives = 214/256 (83.59%), Query Frame = 0
BLAST of Carg14852 vs. TAIR10
Match: AT5G24840.1 (tRNA (guanine-N-7) methyltransferase) HSP 1 Score: 65.9 bits (159), Expect = 5.2e-11 Identity = 53/182 (29.12%), Postives = 82/182 (45.05%), Query Frame = 0
BLAST of Carg14852 vs. Swiss-Prot
Match: sp|Q2JJQ0|TRMB_SYNJB (tRNA (guanine-N(7)-)-methyltransferase OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=trmB PE=3 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 5.3e-45 Identity = 102/214 (47.66%), Postives = 133/214 (62.15%), Query Frame = 0
BLAST of Carg14852 vs. Swiss-Prot
Match: sp|Q2JRH1|TRMB_SYNJA (tRNA (guanine-N(7)-)-methyltransferase OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 GN=trmB PE=3 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 9.0e-45 Identity = 102/211 (48.34%), Postives = 132/211 (62.56%), Query Frame = 0
BLAST of Carg14852 vs. Swiss-Prot
Match: sp|P73161|TRMB_SYNY3 (tRNA (guanine-N(7)-)-methyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=trmB PE=3 SV=2) HSP 1 Score: 166.8 bits (421), Expect = 3.9e-40 Identity = 93/217 (42.86%), Postives = 126/217 (58.06%), Query Frame = 0
BLAST of Carg14852 vs. Swiss-Prot
Match: sp|P72546|TRMB_SYNE7 (tRNA (guanine-N(7)-)-methyltransferase OS=Synechococcus elongatus (strain PCC 7942) OX=1140 GN=trmB PE=3 SV=2) HSP 1 Score: 161.4 bits (407), Expect = 1.6e-38 Identity = 91/216 (42.13%), Postives = 128/216 (59.26%), Query Frame = 0
BLAST of Carg14852 vs. Swiss-Prot
Match: sp|Q5N2X5|TRMB_SYNP6 (tRNA (guanine-N(7)-)-methyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=trmB PE=3 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.6e-38 Identity = 91/216 (42.13%), Postives = 128/216 (59.26%), Query Frame = 0
BLAST of Carg14852 vs. TrEMBL
Match: tr|A0A1S3AVT2|A0A1S3AVT2_CUCME (tRNA (Guanine-N(7)-)-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103483376 PE=4 SV=1) HSP 1 Score: 521.2 bits (1341), Expect = 1.7e-144 Identity = 256/309 (82.85%), Postives = 276/309 (89.32%), Query Frame = 0
BLAST of Carg14852 vs. TrEMBL
Match: tr|A0A0A0L947|A0A0A0L947_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126850 PE=4 SV=1) HSP 1 Score: 511.1 bits (1315), Expect = 1.7e-141 Identity = 252/309 (81.55%), Postives = 274/309 (88.67%), Query Frame = 0
BLAST of Carg14852 vs. TrEMBL
Match: tr|A0A2I4EE21|A0A2I4EE21_9ROSI (uncharacterized protein LOC108988752 OS=Juglans regia OX=51240 GN=LOC108988752 PE=4 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 2.3e-109 Identity = 195/284 (68.66%), Postives = 232/284 (81.69%), Query Frame = 0
BLAST of Carg14852 vs. TrEMBL
Match: tr|D7UB80|D7UB80_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0024g00790 PE=4 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 2.5e-108 Identity = 188/262 (71.76%), Postives = 226/262 (86.26%), Query Frame = 0
BLAST of Carg14852 vs. TrEMBL
Match: tr|A0A2P6SDJ0|A0A2P6SDJ0_ROSCH (Putative tRNA (Guanine(46)-N(7))-methyltransferase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0340701 PE=4 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 4.3e-108 Identity = 184/246 (74.80%), Postives = 221/246 (89.84%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |