Carg14277 (gene) Silver-seed gourd

NameCarg14277
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_040 : 90656 .. 91687 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGGAAGAGATTCAAACGAGTAACCCTAAGAATTGGCAGTGTCATGGAAGACGAGATTGGAGAAGAGTTCGAGAGGAGTGGTTTCACGTTTGACGAAGAGGAAGAGATTCTCAAGAAATGTAAGCTCTACTTCTCATTTTTGTTTGGTTTATGTTCATGATTGGGTAGCATTGACGCGCGATTCCTCCCTTTTCTGTATTCGATCTTTCGTTGTGTGTGCATTACAATCTAAAGCCTTCAGAAATAGATTCTCAAGAGATGACTGTTTATACTAAATTGATGAGGGAGATCCATCAGTTCTTTAATGATTAAATTATTAAAGATCGCCTTATTCTGCAGCCTGCTTTTGACATTACATCTGATCTTAGACTTCTGGTAACTTATTCTTAGGATTTGAGTTACTTCCAGATCTGGAGCTTGATTATGTTGAGTAATGCGTACTGTTGAACTATGTTGGTTTTGGTTCAGATATTCAGTCTCCCAACCCAGGCTTTTTGGAAGCAAATCAGGTAAAACATGGATACAACTTTGCATTTCCAAACAAGTTTTTTATGAATATTTTATTTTCATCCAGGTTTTCTATGTTGGACGTCTGAAGTTTGCTATCACTGTTTATCAATTAATAGCTGATTGTTTTGATACTATGAAAAGAAAGAAAGAAAGGGAAAAATGAGCGCTGGATGCTCCATTGTAAAAAAAAGACATCAACATATAACGAAGCGAAACCACTACGATCATCCTGGCCTTTAGTTTGTACGTGATGTGTGTTTATTCTGGAGTAGGAATAACAATAACCGTCCATCGGTATTCTATTGCTTACAAGTGAAGAATTACATTTGGTTTAGGGTATCGTGCACCTACACTTGCTTAGTTTATACCATGAGATCATTTTTTAGTTCTTAATTCTTATCAGAAAAACAAAAGGGGGAAAAGGACTTTTGAACATTCGTTGTTCTTGAGCTTCTCTTTGGATATCTGACAGGAGAAAAAGAAACCAGTGCACAATGGGGGACTCCCTTGGGGATGA

mRNA sequence

ATGAAGAGGAAGAGATTCAAACGAGTAACCCTAAGAATTGGCAGTGTCATGGAAGACGAGATTGGAGAAGAGTTCGAGAGGAGTGGTTTCACGTTTGACGAAGAGGAAGAGATTCTCAAGAAATATATTCAGTCTCCCAACCCAGGCTTTTTGGAAGCAAATCAGGAGAAAAAGAAACCAGTGCACAATGGGGGACTCCCTTGGGGATGA

Coding sequence (CDS)

ATGAAGAGGAAGAGATTCAAACGAGTAACCCTAAGAATTGGCAGTGTCATGGAAGACGAGATTGGAGAAGAGTTCGAGAGGAGTGGTTTCACGTTTGACGAAGAGGAAGAGATTCTCAAGAAATATATTCAGTCTCCCAACCCAGGCTTTTTGGAAGCAAATCAGGAGAAAAAGAAACCAGTGCACAATGGGGGACTCCCTTGGGGATGA

Protein sequence

MKRKRFKRVTLRIGSVMEDEIGEEFERSGFTFDEEEEILKKYIQSPNPGFLEANQEKKKPVHNGGLPWG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14277-RACarg14277-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..69

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg14277Wax gourdcarwgoB0307
Carg14277Wax gourdcarwgoB0312
Carg14277Silver-seed gourdcarcarB284
Carg14277Silver-seed gourdcarcarB285
Carg14277Cucumber (Gy14) v2carcgybB0257
Carg14277Cucumber (Gy14) v2carcgybB0258
Carg14277Cucumber (Gy14) v1carcgyB0285
Carg14277Cucumber (Gy14) v1carcgyB0289
Carg14277Cucurbita maxima (Rimu)carcmaB0336
Carg14277Cucurbita maxima (Rimu)carcmaB0337
Carg14277Cucurbita maxima (Rimu)carcmaB0339
Carg14277Cucurbita maxima (Rimu)carcmaB0340
Carg14277Cucurbita moschata (Rifu)carcmoB0339
Carg14277Cucurbita moschata (Rifu)carcmoB0342
Carg14277Cucurbita moschata (Rifu)carcmoB0343
Carg14277Cucurbita moschata (Rifu)carcmoB0344
Carg14277Cucurbita pepo (Zucchini)carcpeB0341
Carg14277Cucurbita pepo (Zucchini)carcpeB0343
Carg14277Cucurbita pepo (Zucchini)carcpeB0344
Carg14277Cucurbita pepo (Zucchini)carcpeB0345
Carg14277Wild cucumber (PI 183967)carcpiB0274
Carg14277Wild cucumber (PI 183967)carcpiB0275
Carg14277Cucumber (Chinese Long) v2carcuB0270
Carg14277Cucumber (Chinese Long) v2carcuB0271
Carg14277Cucumber (Chinese Long) v3carcucB0273
Carg14277Cucumber (Chinese Long) v3carcucB0274
Carg14277Bottle gourd (USVL1VR-Ls)carlsiB218
Carg14277Bottle gourd (USVL1VR-Ls)carlsiB219
Carg14277Melon (DHL92) v3.5.1carmeB0246
Carg14277Melon (DHL92) v3.5.1carmeB0248
Carg14277Melon (DHL92) v3.6.1carmedB0255
Carg14277Melon (DHL92) v3.6.1carmedB0257
Carg14277Watermelon (Charleston Gray)carwcgB0237
Carg14277Watermelon (97103) v1carwmB0230
Carg14277Watermelon (97103) v2carwmbB0250