Carg14001 (gene) Silver-seed gourd

Overview
NameCarg14001
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionProtein yippee-like
LocationCucurbita_argyrosperma_scaffold_097 : 264939 .. 266280 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTCATCTTCATACCAAAAAGATATTGAAGAAATGTGTCTGAAACTGTAGAGCTTCAGAGGAGCTCAACCATGGAGGCCCACAATCCGTACTCAACCTTCGCGTAAATTTCTGACTTCTTTTCATTGTTCTTCCTCTTACGCTTCCCAAATTCAACTTCTCCTTCATTTTCTCTGTTAATTAATCCCAAATTCCTTTTCACAGTCTCCAAGCTAAGAATGATTTCCATTTCTCTCTCTTCAATTTGTATTTATCTTTGCTTTAATCGCTCATACCTCATCAACTTTCTTCCATAATTTTCACTAAACTAATAATTTCCAGCACAATCAGGTTCTTCTCTCTCCCTTTATTTCCATTTTCCATAATTTCTTGTTCGTTGATTCAATGATTTTTCCACATTTTGGCTTTTCGGTATGCTCCTTCTCATACTTTTATTGGTGTTCCTGTTCTTGTTCTTAATCCTGTTCTTGTTCTTAATCCTGTTCTTGTTGTTGTTCTTAATCCTGTTCCTGTATTATTGAATCTCTTTTGCTTGAAATCGTCTCTCTGATCCTTTATGTTATCTTATATATTTGATCGCTAACCCCTTTTTGATTATTGATCTTTTTCTTTAGGTTTCTAGGTCACCATTGAAATCATTATAGGTAAACGATTTTGTTCTTGTTTTTACTTTTCCCACCCCTCGTTGGGATTTTGATGATCCATTTATATGGTTTCTTGATGGATGCTTGAATCTCTTTTAATGCAGTCTAGGTGTTTGATTTAATGCTTGGGGCTTGATGGTTGTGTAGGAGGAGAGGCGTTTTGAGCTCAATCTTCTTGATCAATGGCTGAACTATTGGGGCCACGTTTGTATAGTTGCTGTAATTGTAGAAACCATGTTGCCCTCCATGATGATATAATTTCTAAAGCTTTTCAGGTGGGATCTTAGTGCGTTTGATTATCATCAATGCAAAAGGGTTTGCTAATCACTCAAAACCCAATGAGAAATTCATGGATTTCATGTTTTTAACACAATTTTTCTGAAGCTTTAGATTGCAAATGCGTTTCTTAAACTTTTCCTGAAGAACTTTTCATTATCTAATCTTGTTTTTGTCATGAATTATCTCAATAGGGAAGACATGGGCGTGCTTTTCTGTTCTCTCATGCTATGAACTTCACAGTGGGACCAAAAGAAGACCGGCATCTCATGACGGGTCTCCACACTGTTGCTGATGTGCATTGTGTTGACTGTCGTGAGGTGCTGGGGTGGAAGTATGAGAGGGCCTATGAGGCATCACAGAAGTATAAAGAAGGAAAGTTCATTCTTGAAAAATCAAAAATCGTTCGGGACAACTGGTAA

mRNA sequence

AATTCATCTTCATACCAAAAAGATATTGAAGAAATGTGTCTGAAACTGTAGAGCTTCAGAGGAGCTCAACCATGGAGGCCCACAATCCGTACTCAACCTTCGCGTAAATTTCTGACTTCTTTTCATTGTTCTTCCTCTTACGCTTCCCAAATTCAACTTCTCCTTCATTTTCTCTGTTAATTAATCCCAAATTCCTTTTCACAGTCTCCAAGCTAAGAATGATTTCCATTTCTCTCTCTTCAATTTGTATTTATCTTTGCTTTAATCGCTCATACCTCATCAACTTTCTTCCATAATTTTCACTAAACTAATAATTTCCAGCACAATCAGGTTTCTAGGTCACCATTGAAATCATTATAGTCTAGGTGTTTGATTTAATGCTTGGGGCTTGATGGTTGTGTAGGAGGAGAGGCGTTTTGAGCTCAATCTTCTTGATCAATGGCTGAACTATTGGGGCCACGTTTGTATAGTTGCTGTAATTGTAGAAACCATGTTGCCCTCCATGATGATATAATTTCTAAAGCTTTTCAGGGAAGACATGGGCGTGCTTTTCTGTTCTCTCATGCTATGAACTTCACAGTGGGACCAAAAGAAGACCGGCATCTCATGACGGGTCTCCACACTGTTGCTGATGTGCATTGTGTTGACTGTCGTGAGGTGCTGGGGTGGAAGTATGAGAGGGCCTATGAGGCATCACAGAAGTATAAAGAAGGAAAGTTCATTCTTGAAAAATCAAAAATCGTTCGGGACAACTGGTAA

Coding sequence (CDS)

ATGGCTGAACTATTGGGGCCACGTTTGTATAGTTGCTGTAATTGTAGAAACCATGTTGCCCTCCATGATGATATAATTTCTAAAGCTTTTCAGGGAAGACATGGGCGTGCTTTTCTGTTCTCTCATGCTATGAACTTCACAGTGGGACCAAAAGAAGACCGGCATCTCATGACGGGTCTCCACACTGTTGCTGATGTGCATTGTGTTGACTGTCGTGAGGTGCTGGGGTGGAAGTATGAGAGGGCCTATGAGGCATCACAGAAGTATAAAGAAGGAAAGTTCATTCTTGAAAAATCAAAAATCGTTCGGGACAACTGGTAA

Protein sequence

MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGLHTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW
Homology
[Close]
BLAST of Carg14001 vs. NCBI nr
Match: XP_022958298.1 (protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958299.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958300.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958301.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958302.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958303.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958304.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958305.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958306.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958308.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958309.1 protein yippee-like At4g27745 [Cucurbita moschata])

HSP 1 Score: 231.9 bits (590), Expect = 1.0e-57
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL
Sbjct: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW
Sbjct: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 106

[Close]
BLAST of Carg14001 vs. NCBI nr
Match: XP_022922143.1 (protein yippee-like At4g27745 [Cucurbita moschata] >XP_022922144.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022922145.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022996191.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996192.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996193.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996194.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996195.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996196.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996198.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996199.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996200.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996201.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996202.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022974360.1 protein yippee-like At4g27745 isoform X1 [Cucurbita maxima] >XP_022974361.1 protein yippee-like At4g27745 isoform X1 [Cucurbita maxima] >XP_022974362.1 protein yippee-like At4g27745 isoform X1 [Cucurbita maxima] >XP_023532434.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532435.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532436.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532437.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532438.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532439.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532440.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532441.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532442.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532443.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532445.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532446.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023549564.1 protein yippee-like At4g27745 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549565.1 protein yippee-like At4g27745 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549566.1 protein yippee-like At4g27745 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229.6 bits (584), Expect = 5.1e-57
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0 

Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMN TVGPKEDRHLMTGL
Sbjct: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW
Sbjct: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 106

[Close]
BLAST of Carg14001 vs. NCBI nr
Match: XP_004145943.1 (PREDICTED: protein yippee-like At4g27745 [Cucumis sativus] >XP_008437624.1 PREDICTED: protein yippee-like At4g27745 isoform X1 [Cucumis melo] >XP_011654603.1 PREDICTED: protein yippee-like At4g27745 [Cucumis sativus] >XP_011654604.1 PREDICTED: protein yippee-like At4g27745 [Cucumis sativus] >XP_016898814.1 PREDICTED: protein yippee-like At4g27745 isoform X1 [Cucumis melo] >KGN49846.1 hypothetical protein Csa_5G139240 [Cucumis sativus])

HSP 1 Score: 228.0 bits (580), Expect = 1.5e-56
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MAELLGPRLYSCCNCRNHVA HDDIISKAFQGRHGRAFLFSHAMN TVGPKEDRHLMTGL
Sbjct: 1   MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW
Sbjct: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 106

[Close]
BLAST of Carg14001 vs. NCBI nr
Match: XP_022138242.1 (protein yippee-like At4g27745 [Momordica charantia] >XP_022138243.1 protein yippee-like At4g27745 [Momordica charantia] >XP_022138244.1 protein yippee-like At4g27745 [Momordica charantia])

HSP 1 Score: 223.4 bits (568), Expect = 3.6e-55
Identity = 102/106 (96.23%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MAELLGPRLYSCCNCRNHVA HDDIISKAFQGRHGRAFLFSHAMN TVGPKEDRHLMTGL
Sbjct: 1   MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHCVDC  VLGWKYERAYEASQKYKEGKFILEKSKIVRDNW
Sbjct: 61  HTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 106

[Close]
BLAST of Carg14001 vs. NCBI nr
Match: XP_015572669.1 (protein yippee-like At4g27745 isoform X2 [Ricinus communis] >EEF46703.1 fad NAD binding oxidoreductases, putative [Ricinus communis])

HSP 1 Score: 216.9 bits (551), Expect = 3.4e-53
Identity = 97/106 (91.51%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MA+L+GPRLYSCCNCRNHV+LHDDIISKAFQGRHGRAFLFSHAMN  VGPKEDRHLMTGL
Sbjct: 1   MADLVGPRLYSCCNCRNHVSLHDDIISKAFQGRHGRAFLFSHAMNIVVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHC DC EVLGWKYERAYEASQKYKEGKFILEKSKIV++NW
Sbjct: 61  HTVADVHCADCCEVLGWKYERAYEASQKYKEGKFILEKSKIVKENW 106

[Close]
BLAST of Carg14001 vs. TAIR10
Match: AT4G27745.1 (Yippee family putative zinc-binding protein)

HSP 1 Score: 197.6 bits (501), Expect = 3.9e-51
Identity = 87/106 (82.08%), Postives = 96/106 (90.57%), Query Frame = 0 

Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MA+ +GPRLYSCCNCRNHV LHDDIISKAFQGR GRAFLFSHAMN  VGPKEDR+L+TGL
Sbjct: 1   MAQAIGPRLYSCCNCRNHVGLHDDIISKAFQGRTGRAFLFSHAMNIVVGPKEDRNLLTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVAD+ CVDC E LGWKYERAYE SQKYKEGKFI EK+KIV+++W
Sbjct: 61  HTVADISCVDCNEPLGWKYERAYETSQKYKEGKFIFEKAKIVKEDW 106

[Close]
BLAST of Carg14001 vs. TAIR10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein)

HSP 1 Score: 125.2 bits (313), Expect = 2.5e-29
Identity = 55/94 (58.51%), Postives = 73/94 (77.66%), Query Frame = 0 

Query: 9   LYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGLHTVADVHC 68
           +YSC  C+ H A+ +DIISK+F  +HGRA+LF + +N TVG KE R ++TG HTVAD+ C
Sbjct: 13  VYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVMITGWHTVADIFC 72

Query: 69  VDCREVLGWKYERAYEASQKYKEGKFILEKSKIV 103
           V C  ++GWKYE AY+ SQKYKEGKFILE+ K++
Sbjct: 73  VSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVL 106

[Close]
BLAST of Carg14001 vs. TAIR10
Match: AT3G11230.2 (Yippee family putative zinc-binding protein)

HSP 1 Score: 125.2 bits (313), Expect = 2.5e-29
Identity = 52/92 (56.52%), Postives = 72/92 (78.26%), Query Frame = 0 

Query: 10  YSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGLHTVADVHCV 69
           YSC +C+ ++AL DD++SK+FQ RHG+A+LFS  +N   G KEDR +MTG+HTV D++CV
Sbjct: 47  YSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMMMTGMHTVVDIYCV 106

Query: 70  DCREVLGWKYERAYEASQKYKEGKFILEKSKI 102
            C   +GWKYE A+E +QKYKEGK +LE+ K+
Sbjct: 107 KCGSYVGWKYEFAFEKNQKYKEGKSVLERYKV 138

[Close]
BLAST of Carg14001 vs. TAIR10
Match: AT2G40110.1 (Yippee family putative zinc-binding protein)

HSP 1 Score: 122.1 bits (305), Expect = 2.1e-28
Identity = 50/94 (53.19%), Postives = 73/94 (77.66%), Query Frame = 0 

Query: 8   RLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGLHTVADVH 67
           ++YSC +C+ H+A ++DIISK+F  +HG+A+LF+   N ++G  E+R +MTG HTVAD+ 
Sbjct: 12  KIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLMMTGKHTVADIF 71

Query: 68  CVDCREVLGWKYERAYEASQKYKEGKFILEKSKI 102
           CV C  ++GWKYE A+E +QKYKEGK +LE+ KI
Sbjct: 72  CVSCGSIVGWKYETAHEKNQKYKEGKSVLERFKI 105

[Close]
BLAST of Carg14001 vs. TAIR10
Match: AT5G53940.1 (Yippee family putative zinc-binding protein)

HSP 1 Score: 119.8 bits (299), Expect = 1.0e-27
Identity = 49/95 (51.58%), Postives = 74/95 (77.89%), Query Frame = 0 

Query: 8   RLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGLHTVADVH 67
           R Y C  CR H+AL DD++S++F  R G+A+LF+ ++N ++GP E+R +++G+HTVAD+ 
Sbjct: 12  RSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLMLSGMHTVADIF 71

Query: 68  CVDCREVLGWKYERAYEASQKYKEGKFILEKSKIV 103
           C  C + +GWKYE A+E +QKYKEGKF+LE+ +IV
Sbjct: 72  CCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIV 106

[Close]
BLAST of Carg14001 vs. Swiss-Prot
Match: sp|Q9T096|YIPL6_ARATH (Protein yippee-like At4g27745 OS=Arabidopsis thaliana OX=3702 GN=At4g27745 PE=3 SV=2)

HSP 1 Score: 197.6 bits (501), Expect = 7.0e-50
Identity = 87/106 (82.08%), Postives = 96/106 (90.57%), Query Frame = 0 

Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MA+ +GPRLYSCCNCRNHV LHDDIISKAFQGR GRAFLFSHAMN  VGPKEDR+L+TGL
Sbjct: 1   MAQAIGPRLYSCCNCRNHVGLHDDIISKAFQGRTGRAFLFSHAMNIVVGPKEDRNLLTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVAD+ CVDC E LGWKYERAYE SQKYKEGKFI EK+KIV+++W
Sbjct: 61  HTVADISCVDCNEPLGWKYERAYETSQKYKEGKFIFEKAKIVKEDW 106

[Close]
BLAST of Carg14001 vs. Swiss-Prot
Match: sp|A6QPH8|YPEL3_BOVIN (Protein yippee-like 3 OS=Bos taurus OX=9913 GN=YPEL3 PE=3 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 2.3e-32
Identity = 58/98 (59.18%), Postives = 79/98 (80.61%), Query Frame = 0 

Query: 8   RLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGLHTVADVH 67
           R YSC +CR H+A HDD+ISK+FQG  GRA+LF+  +N   GP E+R L+TGLH VAD+H
Sbjct: 19  RRYSCAHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIH 78

Query: 68  CVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDN 106
           C +C+  LGWKYE+A+E+SQKYKEGK+I+E + +++DN
Sbjct: 79  CENCKTTLGWKYEQAFESSQKYKEGKYIIELNHMIKDN 116

[Close]
BLAST of Carg14001 vs. Swiss-Prot
Match: sp|Q65Z57|YPEL3_CHLAE (Protein yippee-like 3 OS=Chlorocebus aethiops OX=9534 GN=YPEL3 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.3e-32
Identity = 58/98 (59.18%), Postives = 79/98 (80.61%), Query Frame = 0 

Query: 8   RLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGLHTVADVH 67
           R YSC +CR H+A HDD+ISK+FQG  GRA+LF+  +N   GP E+R L+TGLH VAD+H
Sbjct: 19  RRYSCAHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIH 78

Query: 68  CVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDN 106
           C +C+  LGWKYE+A+E+SQKYKEGK+I+E + +++DN
Sbjct: 79  CENCKTTLGWKYEQAFESSQKYKEGKYIIELNHMIKDN 116

[Close]
BLAST of Carg14001 vs. Swiss-Prot
Match: sp|P61236|YPEL3_HUMAN (Protein yippee-like 3 OS=Homo sapiens OX=9606 GN=YPEL3 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.3e-32
Identity = 58/98 (59.18%), Postives = 79/98 (80.61%), Query Frame = 0 

Query: 8   RLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGLHTVADVH 67
           R YSC +CR H+A HDD+ISK+FQG  GRA+LF+  +N   GP E+R L+TGLH VAD+H
Sbjct: 19  RRYSCAHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIH 78

Query: 68  CVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDN 106
           C +C+  LGWKYE+A+E+SQKYKEGK+I+E + +++DN
Sbjct: 79  CENCKTTLGWKYEQAFESSQKYKEGKYIIELNHMIKDN 116

[Close]
BLAST of Carg14001 vs. Swiss-Prot
Match: sp|P61237|YPEL3_MOUSE (Protein yippee-like 3 OS=Mus musculus OX=10090 GN=Ypel3 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.3e-32
Identity = 58/98 (59.18%), Postives = 79/98 (80.61%), Query Frame = 0 

Query: 8   RLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGLHTVADVH 67
           R YSC +CR H+A HDD+ISK+FQG  GRA+LF+  +N   GP E+R L+TGLH VAD+H
Sbjct: 19  RRYSCAHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIH 78

Query: 68  CVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDN 106
           C +C+  LGWKYE+A+E+SQKYKEGK+I+E + +++DN
Sbjct: 79  CENCKTTLGWKYEQAFESSQKYKEGKYIIELNHMIKDN 116

[Close]
BLAST of Carg14001 vs. TrEMBL
Match: tr|A0A1S3AUL4|A0A1S3AUL4_CUCME (Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103482979 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 9.8e-57
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MAELLGPRLYSCCNCRNHVA HDDIISKAFQGRHGRAFLFSHAMN TVGPKEDRHLMTGL
Sbjct: 1   MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW
Sbjct: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 106

[Close]
BLAST of Carg14001 vs. TrEMBL
Match: tr|A0A0A0KQ44|A0A0A0KQ44_CUCSA (Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_5G139240 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 9.8e-57
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MAELLGPRLYSCCNCRNHVA HDDIISKAFQGRHGRAFLFSHAMN TVGPKEDRHLMTGL
Sbjct: 1   MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW
Sbjct: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 106

[Close]
BLAST of Carg14001 vs. TrEMBL
Match: tr|B9RPI2|B9RPI2_RICCO (Protein yippee-like OS=Ricinus communis OX=3988 GN=RCOM_1377480 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.3e-53
Identity = 97/106 (91.51%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MA+L+GPRLYSCCNCRNHV+LHDDIISKAFQGRHGRAFLFSHAMN  VGPKEDRHLMTGL
Sbjct: 1   MADLVGPRLYSCCNCRNHVSLHDDIISKAFQGRHGRAFLFSHAMNIVVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHC DC EVLGWKYERAYEASQKYKEGKFILEKSKIV++NW
Sbjct: 61  HTVADVHCADCCEVLGWKYERAYEASQKYKEGKFILEKSKIVKENW 106

[Close]
BLAST of Carg14001 vs. TrEMBL
Match: tr|A0A2I4GFZ9|A0A2I4GFZ9_9ROSI (Protein yippee-like OS=Juglans regia OX=51240 GN=LOC109007559 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 8.6e-53
Identity = 95/106 (89.62%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MAEL+GPRLYSCCNCRNHV+LHDDIISKAFQGRHGRAFLFSHAMN +VG KEDRHLMTGL
Sbjct: 1   MAELIGPRLYSCCNCRNHVSLHDDIISKAFQGRHGRAFLFSHAMNISVGRKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVAD+HC DC+EVLGWKYERAYEASQKYKEGKFI EKSKIV++NW
Sbjct: 61  HTVADIHCADCQEVLGWKYERAYEASQKYKEGKFIFEKSKIVKENW 106

[Close]
BLAST of Carg14001 vs. TrEMBL
Match: tr|A0A067JXD2|A0A067JXD2_JATCU (Protein yippee-like OS=Jatropha curcas OX=180498 GN=JCGZ_20124 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.9e-52
Identity = 94/106 (88.68%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNFTVGPKEDRHLMTGL 60
           MAEL+GPRLYSCCNCRNHV+LHDDIISKAFQGRHGRAFLFSHAMN  VGPKEDRHL+TGL
Sbjct: 1   MAELVGPRLYSCCNCRNHVSLHDDIISKAFQGRHGRAFLFSHAMNIVVGPKEDRHLITGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVAD++C DCREVLGWKY+RAYEASQKYKEGKFI EKSKIV++NW
Sbjct: 61  HTVADIYCADCREVLGWKYKRAYEASQKYKEGKFIFEKSKIVKENW 106

The following BLAST results are available for this feature:
BLAST of Carg14001 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022958298.11.0e-57100.00protein yippee-like At4g27745 [Cucurbita moschata] >XP_022958299.1 protein yippe... [more]
XP_022922143.15.1e-5799.06protein yippee-like At4g27745 [Cucurbita moschata] >XP_022922144.1 protein yippe... [more]
XP_004145943.11.5e-5698.11PREDICTED: protein yippee-like At4g27745 [Cucumis sativus] >XP_008437624.1 PREDI... [more]
XP_022138242.13.6e-5596.23protein yippee-like At4g27745 [Momordica charantia] >XP_022138243.1 protein yipp... [more]
XP_015572669.13.4e-5391.51protein yippee-like At4g27745 isoform X2 [Ricinus communis] >EEF46703.1 fad NAD ... [more]
BLAST of Carg14001 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27745.13.9e-5182.08Yippee family putative zinc-binding protein[more]
AT3G08990.12.5e-2958.51Yippee family putative zinc-binding protein[more]
AT3G11230.22.5e-2956.52Yippee family putative zinc-binding protein[more]
AT2G40110.12.1e-2853.19Yippee family putative zinc-binding protein[more]
AT5G53940.11.0e-2751.58Yippee family putative zinc-binding protein[more]
BLAST of Carg14001 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9T096|YIPL6_ARATH7.0e-5082.08Protein yippee-like At4g27745 OS=Arabidopsis thaliana OX=3702 GN=At4g27745 PE=3 ... [more]
sp|A6QPH8|YPEL3_BOVIN2.3e-3259.18Protein yippee-like 3 OS=Bos taurus OX=9913 GN=YPEL3 PE=3 SV=2[more]
sp|Q65Z57|YPEL3_CHLAE2.3e-3259.18Protein yippee-like 3 OS=Chlorocebus aethiops OX=9534 GN=YPEL3 PE=3 SV=1[more]
sp|P61236|YPEL3_HUMAN2.3e-3259.18Protein yippee-like 3 OS=Homo sapiens OX=9606 GN=YPEL3 PE=2 SV=1[more]
sp|P61237|YPEL3_MOUSE2.3e-3259.18Protein yippee-like 3 OS=Mus musculus OX=10090 GN=Ypel3 PE=1 SV=1[more]
BLAST of Carg14001 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AUL4|A0A1S3AUL4_CUCME9.8e-5798.11Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103482979 PE=3 SV=1[more]
tr|A0A0A0KQ44|A0A0A0KQ44_CUCSA9.8e-5798.11Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_5G139240 PE=3 SV=1[more]
tr|B9RPI2|B9RPI2_RICCO2.3e-5391.51Protein yippee-like OS=Ricinus communis OX=3988 GN=RCOM_1377480 PE=3 SV=1[more]
tr|A0A2I4GFZ9|A0A2I4GFZ9_9ROSI8.6e-5389.62Protein yippee-like OS=Juglans regia OX=51240 GN=LOC109007559 PE=3 SV=1[more]
tr|A0A067JXD2|A0A067JXD2_JATCU1.9e-5288.68Protein yippee-like OS=Jatropha curcas OX=180498 GN=JCGZ_20124 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR034751Yippee
IPR039058Yippee_fam
IPR004910Yippee/Mis18/Cereblon
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14001-RACarg14001-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004910Yippee/Mis18/CereblonPFAMPF03226Yippee-Mis18coord: 10..101
e-value: 1.9E-15
score: 56.9
NoneNo IPR availablePANTHERPTHR13848:SF36SUBFAMILY NOT NAMEDcoord: 1..106
IPR039058Yippee familyPANTHERPTHR13848FAMILY NOT NAMEDcoord: 1..106
IPR034751Yippee domainPROSITEPS51792YIPPEEcoord: 8..105
score: 51.486

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg14001Cla004878Watermelon (97103) v1carwmB0504
Carg14001Csa5G139240Cucumber (Chinese Long) v2carcuB0537
Carg14001MELO3C005899Melon (DHL92) v3.5.1carmeB0507
Carg14001ClCG01G000250Watermelon (Charleston Gray)carwcgB0492
Carg14001CSPI05G03000Wild cucumber (PI 183967)carcpiB0544
Carg14001Cucsa.202270Cucumber (Gy14) v1carcgyB0582
Carg14001CmoCh02G011660Cucurbita moschata (Rifu)carcmoB0694
Carg14001Lsi09G000070Bottle gourd (USVL1VR-Ls)carlsiB457
Carg14001Cp4.1LG13g03270Cucurbita pepo (Zucchini)carcpeB0713
Carg14001CsGy5G000280Cucumber (Gy14) v2carcgybB0514
Carg14001MELO3C005899.2Melon (DHL92) v3.6.1carmedB0512
Carg14001CsaV3_5G000330Cucumber (Chinese Long) v3carcucB0542
Carg14001Cla97C01G000290Watermelon (97103) v2carwmbB0529
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg14001Silver-seed gourdcarcarB490
Carg14001Silver-seed gourdcarcarB494
Carg14001Cucumber (Gy14) v2carcgybB0513
Carg14001Cucumber (Gy14) v1carcgyB0583
Carg14001Cucurbita maxima (Rimu)carcmaB0712
Carg14001Cucurbita maxima (Rimu)carcmaB0713
Carg14001Cucurbita maxima (Rimu)carcmaB0714
Carg14001Cucurbita maxima (Rimu)carcmaB0716
Carg14001Cucurbita moschata (Rifu)carcmoB0691
Carg14001Cucurbita moschata (Rifu)carcmoB0692
Carg14001Cucurbita moschata (Rifu)carcmoB0693
Carg14001Cucurbita pepo (Zucchini)carcpeB0712
Carg14001Cucurbita pepo (Zucchini)carcpeB0714
Carg14001Cucurbita pepo (Zucchini)carcpeB0718
Carg14001Wild cucumber (PI 183967)carcpiB0543
Carg14001Cucumber (Chinese Long) v2carcuB0536
Carg14001Cucumber (Chinese Long) v3carcucB0541
Carg14001Bottle gourd (USVL1VR-Ls)carlsiB460
Carg14001Melon (DHL92) v3.5.1carmeB0508
Carg14001Melon (DHL92) v3.5.1carmeB0513
Carg14001Melon (DHL92) v3.6.1carmedB0514
Carg14001Melon (DHL92) v3.6.1carmedB0519
Carg14001Watermelon (Charleston Gray)carwcgB0495
Carg14001Watermelon (97103) v1carwmB0503
Carg14001Watermelon (97103) v2carwmbB0533
Carg14001Wax gourdcarwgoB0615
Carg14001Wax gourdcarwgoB0617