Carg13868 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13868
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Squamosa promoter binding protein-like protein
Location	Cucurbita_argyrosperma_scaffold_042 : 377619 .. 379492 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGATCTGAATTTTTGTTCTTCCCCTCTGCTTCAGCCATTGGTGAGAGTGAGAAATTTGTTAATTTTAATTTTAATTGTTATTAAAATAAGGGAAGTGATTTTTTATGTGAAAATTATGCGTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTCTCCGACATTACAGGTACTTTGCCTCGAAATTTTAAAAGAAAATGTTGGAATATGAATGGGGATCAACGAACGCGCCGCCGATTCTTCTCCCCGGCGACGAATCCGAACCCGCTTTCAACCCGGAAGCGCCTCACTCTCACCATTTACCCACTTTCATGGACCATCACCACCACAACACTTTCTTGCCGACTCTGACTCCGCCGCCGTTCACTACCCACTTCGGCGGGTTCGACGACCACCCACATAGCTTCATAATGGGTCCTTCTCATCATTACGATACTGTGGCCGACGCCGTCCATGGCGGAGGTGTCGGAGGGGGGGAGTTTGTGGTGGTACCCAAGAGTGAGGAGGTTTGTCGGAGTATAACGGCAGTTCCTGTAGATTTCGCGGCGAGGATAGGGCTAAATTTAGGGGGGAGAACCTATTTCTCGTCTGAGGAGGAGGAGTTCGTGAATCAATTGTACCGGAGAGCGAGAACCGGTGGCGAACCGGGTTCGGGGAACTGGTCGGCTCGGTGCCAAGCGGAGGGGTGTAATGCGGATCTGAGCCAAGCCAAACAATACCACCGACGGCATAAAGTTTGTGAGTTTCATTCTAAAGCTTCCACCGTCATCACCGCCGGGTTGACTCAGAGGTTCTGTCAGCAATGCAGCAGGTTCGTTCCCCCTTCTAAAATTCCTAAACTACCCTCGTACGTCCGTCATTTCAAAATCTCTTCGTAAACATTTAGCGTTACGATCATTTAGATAATTAAAAGTTATGTTATCGAAATACGTTCGAATTAAACCAAGATGAAATAGTACACGGAGCTTTAATGTGTAGCTACTCCGACATTAAAATTAGTTGAATTAATCTTTCATTATAGTACCTAGGCTTCCAACTACTTGAATATTTCACCCAACTTAGTGAGTCAAGTGTGTAAAATGACATGAATACCCTTGTTAGAGGTCAATCATTGGTTGGACGTATTGTGGAGTAAATCCCGAGGGTAATTCCGTCCGTAGGAAAAAATTCCTGTAGTTTTCAGGTTTGACGGTGGCTCTAGACTTGCCCCCCTTCACAAAAGACCTAGAGCCACTTTCCAGAGATAGCTGCACATGTGCCCAAAATACCGAAAATACCCTCGCGATACCAAAATAATGATTGGCCTTTCGTACAAAGAAAAAAAGAAACCCGGAGGGCATTTTCGTACCCCGATTTTATTTTTGGTTTAATAAAATATGTGTTTGGAATGAAGAACCAAACATAGGTCAAAGTCAAAGGTTAGAAGCGGGGCCCACGTCCATTATTGTAATAATAATAATAATATACATGAAAAACTATGTTATATTATGTGTATGATAATATTGAAAAAATGGATGGTGGAGGGTTTGTTACAGGTTTCATGTGCTGGCCGAGTTTGATAACGGAAAACGGAGTTGTCGGAAGAGGTTGGCGGATCACAACCGTCGACGGCGGAAGACACAACATATTTCCAATCAAGGAAGCCCCAAGACGCAGCGCCTTCAAACTACTACTACTAGTACTACTTCTTCAACCGAACAGTCGGCGTGGTCGGTGACCGTGGCAGTGTCTCCGGCGAAGATGTCGTTGGAGTGCCTTAACCAACGCCCATATTAGACAACAAATTTAATGATATTAATATGTGTATTGTGTAGGTAGCTTTTATCTTAACCTTCTTTATTTTAGTTTTAATAAGAATACATTTTGTGTAATATTA

mRNA sequence

GGGATCTGAATTTTTGTTCTTCCCCTCTGCTTCAGCCATTGGTACTTTGCCTCGAAATTTTAAAAGAAAATGTTGGAATATGAATGGGGATCAACGAACGCGCCGCCGATTCTTCTCCCCGGCGACGAATCCGAACCCGCTTTCAACCCGGAAGCGCCTCACTCTCACCATTTACCCACTTTCATGGACCATCACCACCACAACACTTTCTTGCCGACTCTGACTCCGCCGCCGTTCACTACCCACTTCGGCGGGTTCGACGACCACCCACATAGCTTCATAATGGGTCCTTCTCATCATTACGATACTGTGGCCGACGCCGTCCATGGCGGAGGTGTCGGAGGGGGGGAGTTTGTGGTGGTACCCAAGAGTGAGGAGGTTTGTCGGAGTATAACGGCAGTTCCTGTAGATTTCGCGGCGAGGATAGGGCTAAATTTAGGGGGGAGAACCTATTTCTCGTCTGAGGAGGAGGAGTTCGTGAATCAATTGTACCGGAGAGCGAGAACCGGTGGCGAACCGGGTTCGGGGAACTGGTCGGCTCGGTGCCAAGCGGAGGGGTGTAATGCGGATCTGAGCCAAGCCAAACAATACCACCGACGGCATAAAGTTTGTGAGTTTCATTCTAAAGCTTCCACCGTCATCACCGCCGGGTTGACTCAGAGGTTCTGTCAGCAATGCAGCAGGTTTCATGTGCTGGCCGAGTTTGATAACGGAAAACGGAGTTGTCGGAAGAGGTTGGCGGATCACAACCGTCGACGGCGGAAGACACAACATATTTCCAATCAAGGAAGCCCCAAGACGCAGCGCCTTCAAACTACTACTACTAGTACTACTTCTTCAACCGAACAGTCGGCGTGGTCGGTGACCGTGGCAGTGTCTCCGGCGAAGATGTCGTTGGAGTGCCTTAACCAACGCCCATATTAGACAACAAATTTAATGATATTAATATGTGTATTGTGTAGGTAGCTTTTATCTTAACCTTCTTTATTTTAGTTTTAATAAGAATACATTTTGTGTAATATTA

Coding sequence (CDS)

ATGTTGGAATATGAATGGGGATCAACGAACGCGCCGCCGATTCTTCTCCCCGGCGACGAATCCGAACCCGCTTTCAACCCGGAAGCGCCTCACTCTCACCATTTACCCACTTTCATGGACCATCACCACCACAACACTTTCTTGCCGACTCTGACTCCGCCGCCGTTCACTACCCACTTCGGCGGGTTCGACGACCACCCACATAGCTTCATAATGGGTCCTTCTCATCATTACGATACTGTGGCCGACGCCGTCCATGGCGGAGGTGTCGGAGGGGGGGAGTTTGTGGTGGTACCCAAGAGTGAGGAGGTTTGTCGGAGTATAACGGCAGTTCCTGTAGATTTCGCGGCGAGGATAGGGCTAAATTTAGGGGGGAGAACCTATTTCTCGTCTGAGGAGGAGGAGTTCGTGAATCAATTGTACCGGAGAGCGAGAACCGGTGGCGAACCGGGTTCGGGGAACTGGTCGGCTCGGTGCCAAGCGGAGGGGTGTAATGCGGATCTGAGCCAAGCCAAACAATACCACCGACGGCATAAAGTTTGTGAGTTTCATTCTAAAGCTTCCACCGTCATCACCGCCGGGTTGACTCAGAGGTTCTGTCAGCAATGCAGCAGGTTTCATGTGCTGGCCGAGTTTGATAACGGAAAACGGAGTTGTCGGAAGAGGTTGGCGGATCACAACCGTCGACGGCGGAAGACACAACATATTTCCAATCAAGGAAGCCCCAAGACGCAGCGCCTTCAAACTACTACTACTAGTACTACTTCTTCAACCGAACAGTCGGCGTGGTCGGTGACCGTGGCAGTGTCTCCGGCGAAGATGTCGTTGGAGTGCCTTAACCAACGCCCATATTAG

Protein sequence

MLEYEWGSTNAPPILLPGDESEPAFNPEAPHSHHLPTFMDHHHHNTFLPTLTPPPFTTHFGGFDDHPHSFIMGPSHHYDTVADAVHGGGVGGGEFVVVPKSEEVCRSITAVPVDFAARIGLNLGGRTYFSSEEEEFVNQLYRRARTGGEPGSGNWSARCQAEGCNADLSQAKQYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADHNRRRRKTQHISNQGSPKTQRLQTTTTSTTSSTEQSAWSVTVAVSPAKMSLECLNQRPY

Homology

[Close]

BLAST of Carg13868 vs. NCBI nr
Match: XP_023513854.1 (squamosa promoter-binding-like protein 8 [Cucurbita pepo subsp. pepo] >XP_023513855.1 squamosa promoter-binding-like protein 8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 486.9 bits (1252), Expect = 4.7e-134
Identity = 261/284 (91.90%), Postives = 263/284 (92.61%), Query Frame = 0


Query: 1   MLEYEWGSTNAPPILLPGDESEPAFNPEAPHSHHLPTFMDHXXXXXXLPTLTPPPFTTHF 60
           MLEYEWGSTNAPPILLPGDESEPAFNPEAPHSHHLPTF+DHXXXXXX  TLTPPPFTTHF
Sbjct: 1   MLEYEWGSTNAPPILLPGDESEPAFNPEAPHSHHLPTFIDHXXXXXXXXTLTPPPFTTHF 60

Query: 61  GGFDDHPHSFIMGPSHHYDTVADAVHGGGVGGGEFVVVPKSEEVCRSITAVPVDFAARIG 120
           GGFDDHPHSFIMGPSHHYDTV DAVHGGGVGGGEFVVVPKSEEVCRSITAVPVDFAARIG
Sbjct: 61  GGFDDHPHSFIMGPSHHYDTVVDAVHGGGVGGGEFVVVPKSEEVCRSITAVPVDFAARIG 120

Query: 121 LNLGGRTYFSSEEEEFVNQLYRRARTGGEPGSGNWSARCQAEGCNADLSQAKQYHRRHKV 180
           LNLGGRTYFSSEEEEFVNQLYRRARTGGEPGSGNWSARCQAEGCNADLSQAKQYHRRHKV
Sbjct: 121 LNLGGRTYFSSEEEEFVNQLYRRARTGGEPGSGNWSARCQAEGCNADLSQAKQYHRRHKV 180

Query: 181 CEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADHNRRRRKTQHISNQG 240
           CEFHSKASTVITAGLTQRFCQQCSRFHVL EFDNGKRSCRKRLADHN  R          
Sbjct: 181 CEFHSKASTVITAGLTQRFCQQCSRFHVLTEFDNGKRSCRKRLADHN--RXXXXXXXXXX 240

Query: 241 SPKTXXXXXXXXXXXXXXXXXAWSVTVAVSPAKMSLECLNQRPY 285
               XXXXXXXXXXXXXXXX AWSVTVAVSPAKMSLECL+QRPY
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXSAWSVTVAVSPAKMSLECLSQRPY 282

[Close]

BLAST of Carg13868 vs. NCBI nr
Match: XP_023000065.1 (squamosa promoter-binding-like protein 8 [Cucurbita maxima] >XP_023000066.1 squamosa promoter-binding-like protein 8 [Cucurbita maxima] >XP_023000067.1 squamosa promoter-binding-like protein 8 [Cucurbita maxima])

HSP 1 Score: 481.5 bits (1238), Expect = 2.0e-132
Identity = 251/284 (88.38%), Postives = 255/284 (89.79%), Query Frame = 0


Query: 1   MLEYEWGSTNAPPILLPGDESEPAFNPEAPHSHHLPTFMDHXXXXXXLPTLTPPPFTTHF 60
           MLEYEWGSTN PPILLPGDESEPAFNPEAPHSHHLPTF+DH      LPTLTPPPF+THF
Sbjct: 1   MLEYEWGSTNPPPILLPGDESEPAFNPEAPHSHHLPTFIDHHHHNTFLPTLTPPPFSTHF 60

Query: 61  GGFDDHPHSFIMGPSHHYDTVADAVHGGGVGGGEFVVVPKSEEVCRSITAVPVDFAARIG 120
            GFDDHPHSFIMGPSHHYDT+ DAVHGGGV GGE+VVVPKSEEVCRSI AVPVDFAARIG
Sbjct: 61  AGFDDHPHSFIMGPSHHYDTMVDAVHGGGVVGGEYVVVPKSEEVCRSIAAVPVDFAARIG 120

Query: 121 LNLGGRTYFSSEEEEFVNQLYRRARTGGEPGSGNWSARCQAEGCNADLSQAKQYHRRHKV 180
           LNLGGRTYFSSEEEEFVNQLYRRARTGGEPGSGNWSARCQAEGCNADLSQAKQYHRRHKV
Sbjct: 121 LNLGGRTYFSSEEEEFVNQLYRRARTGGEPGSGNWSARCQAEGCNADLSQAKQYHRRHKV 180

Query: 181 CEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADHNRRRRKTQHISNQG 240
           CEFHSKASTVITAGLTQRFCQQCSRFHVL EFDNGKRSCRKRLADHN             
Sbjct: 181 CEFHSKASTVITAGLTQRFCQQCSRFHVLTEFDNGKRSCRKRLADHNXXXXXXXXXXXXX 240

Query: 241 SPKTXXXXXXXXXXXXXXXXXAWSVTVAVSPAKMSLECLNQRPY 285
               XXXXXXXXXXXXXXXXXAWSVTVAVSPAKMSLECLNQRPY
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXAWSVTVAVSPAKMSLECLNQRPY 284

[Close]

BLAST of Carg13868 vs. NCBI nr
Match: XP_022964056.1 (squamosa promoter-binding-like protein 8 [Cucurbita moschata] >XP_022964057.1 squamosa promoter-binding-like protein 8 [Cucurbita moschata] >XP_022964058.1 squamosa promoter-binding-like protein 8 [Cucurbita moschata] >XP_022964059.1 squamosa promoter-binding-like protein 8 [Cucurbita moschata])

HSP 1 Score: 459.5 bits (1181), Expect = 8.1e-126
Identity = 252/284 (88.73%), Postives = 253/284 (89.08%), Query Frame = 0


Query: 1   MLEYEWGSTNAPPILLPGDESEPAFNPEAPHSHHLPTFMDHXXXXXXLPTLTPPPFTTHF 60
           MLEYEWGSTNAPPILLPGDESEPAFNPEAPHSHHLPTF+D XXXXXX           HF
Sbjct: 1   MLEYEWGSTNAPPILLPGDESEPAFNPEAPHSHHLPTFIDXXXXXXXXXXXXXXXXXXHF 60

Query: 61  GGFDDHPHSFIMGPSHHYDTVADAVHGGGVGGGEFVVVPKSEEVCRSITAVPVDFAARIG 120
           GGFDDHPHSFIMGPSHHYDTVADAVHGGGVGG EFVVVPKSEEVCRSITAVPVDFAARIG
Sbjct: 61  GGFDDHPHSFIMGPSHHYDTVADAVHGGGVGGEEFVVVPKSEEVCRSITAVPVDFAARIG 120

Query: 121 LNLGGRTYFSSEEEEFVNQLYRRARTGGEPGSGNWSARCQAEGCNADLSQAKQYHRRHKV 180
           LNLGGRTYFSSEEEEFVNQLYRRARTGGEPGSGNWSARCQAEGCNADLSQAKQYHRRHKV
Sbjct: 121 LNLGGRTYFSSEEEEFVNQLYRRARTGGEPGSGNWSARCQAEGCNADLSQAKQYHRRHKV 180

Query: 181 CEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADHNRRRRKTQHISNQG 240
           CEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADHN             
Sbjct: 181 CEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADHN-XXXXXXXXXXXX 240

Query: 241 SPKTXXXXXXXXXXXXXXXXXAWSVTVAVSPAKMSLECLNQRPY 285
               XXXXXXXXXXXXXXXX AWSVTVAVSPAKMSLECLNQRPY
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXSAWSVTVAVSPAKMSLECLNQRPY 283

[Close]

BLAST of Carg13868 vs. NCBI nr
Match: XP_008458127.1 (PREDICTED: squamosa promoter-binding-like protein 8 [Cucumis melo] >XP_008458128.1 PREDICTED: squamosa promoter-binding-like protein 8 [Cucumis melo])

HSP 1 Score: 287.7 bits (735), Expect = 4.2e-74
Identity = 172/298 (57.72%), Postives = 191/298 (64.09%), Query Frame = 0


Query: 1   MLEYEWGSTNAPPILLPGDESEPAFNPEAPHSHHLPTFMD---HXXXXXXLPTLTPPPFT 60
           ML+YEWGSTN PPI+L G+ESEP FN +  HSH+ PTF+D    XXXXXX          
Sbjct: 1   MLDYEWGSTNPPPIILSGEESEPVFNSDPSHSHNFPTFIDLHXXXXXXXXXXXXXXXXXX 60

Query: 61  THFGGFDDHPHSFIMGPSHHYDTVADAVHGGGVGGGEFVVVPKSEEVCRSITAVPVDFAA 120
                                               EF++VPKSE+VC S+ A PV+FAA
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFMLVPKSEDVCGSM-AAPVEFAA 120

Query: 121 RIGLNLGGRTYFSSEEEEFVNQLYRRARTGGE-PGSGNWSARCQAEGCNADLSQAKQYHR 180
           RIGLNLGGRTYFSSEEEEFVN+LYR+ R+G E  GSGNW+ RCQAEGCNADLSQAK YHR
Sbjct: 121 RIGLNLGGRTYFSSEEEEFVNRLYRKTRSGSEMGGSGNWAVRCQAEGCNADLSQAKHYHR 180

Query: 181 RHKVCEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADH---------- 240
           RHKVCEFHSKASTVITAGLTQRFCQQCSRFHV+ EFDNGKRSCRKRLADH          
Sbjct: 181 RHKVCEFHSKASTVITAGLTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHXXXXXXXXXX 240

Query: 241 NRRRRKTQHISNQGSPKTXXXXXXXXXXXXXXXXXAWSVTVAVSPAKMSLECLNQRPY 285
                             XXXXXX           AWSVTVAVSP +MSL+CLNQRP+
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXTRSTMESTGQSAWSVTVAVSPTRMSLDCLNQRPF 297

[Close]

BLAST of Carg13868 vs. NCBI nr
Match: XP_004140489.1 (PREDICTED: squamosa promoter-binding-like protein 8 [Cucumis sativus] >XP_011656869.1 PREDICTED: squamosa promoter-binding-like protein 8 [Cucumis sativus] >KGN46565.1 hypothetical protein Csa_6G109120 [Cucumis sativus])

HSP 1 Score: 283.9 bits (725), Expect = 6.1e-73
Identity = 167/297 (56.23%), Postives = 181/297 (60.94%), Query Frame = 0


Query: 1   MLEYEWGSTNAPPILLPGDESEPAFNPEAPHSHHLPTFMDHXXXXXXLPTLTPPPFTTHF 60
           ML+YEWGSTN PPI+L G+ESEP FN    HSH+ PTF+D  XXXXX             
Sbjct: 1   MLDYEWGSTNPPPIILSGEESEPVFNSVPSHSHNFPTFVDLHXXXXXXXXXXXXXXXXXX 60

Query: 61  GGFDDHPHSFIMGPSHHYDTVADAVHGGGVGGGEFVVVPKSEEVCRSI-TAVPVDFAARI 120
                                              ++VPKSE VC SI  A P +FAARI
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLVPKSENVCGSIGAAAPAEFAARI 120

Query: 121 GLNLGGRTYFSSEEEEFVNQLYRRARTGGE-PGSGNWSARCQAEGCNADLSQAKQYHRRH 180
           GLNLGGRTYFSSEEEEFVN+LYRR RTG E  GSGNW+ RCQAEGCNADLSQAK YHRRH
Sbjct: 121 GLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRH 180

Query: 181 KVCEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADHN----------R 240
           KVCEFHSKASTVITAGLTQRFCQQCSRFHV+ EFDNGKRSCRKRLADHN           
Sbjct: 181 KVCEFHSKASTVITAGLTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHNXXXXXXXXXXX 240

Query: 241 RRRKTQHISNQGSPKTXXXXXXXXXXXXXXXXXAWSVTVAV-SPAKMSLECLNQRPY 285
                           XX                WSVTVAV SP +MSL+CLNQ+PY
Sbjct: 241 XXXXXXXXXXXXXXXXXXHSAATRSTMESTGQSTWSVTVAVSSPTRMSLDCLNQQPY 297

[Close]

BLAST of Carg13868 vs. TAIR10
Match: AT1G02065.1 (squamosa promoter binding protein-like 8)

HSP 1 Score: 199.5 bits (506), Expect = 2.7e-51
Identity = 120/223 (53.81%), Postives = 141/223 (63.23%), Query Frame = 0


Query: 66  HPHSFIMGPS-HHYDTVADAVHGGGVGGGEFVVVPKSEEVCRSITAVPVDFAA-RIGLNL 125
           HPHS     S   YD       G G G     ++PK+E          VDF + RIGLNL
Sbjct: 105 HPHSSAPPASLFSYDQTGP---GSGSGSSYNFLIPKTE----------VDFTSNRIGLNL 164

Query: 126 GGRTYFSSEEEEFVNQLYRRARTGGEPGSGN--WSARCQAEGCNADLSQAKQYHRRHKVC 185
           GGRTYFS+ +++FV++LYRR+R  GE G  N   + RCQAEGCNADLS AK YHRRHKVC
Sbjct: 165 GGRTYFSAADDDFVSRLYRRSRP-GESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVC 224

Query: 186 EFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADHNRRRRKTQHISNQGS 245
           EFHSKASTV+ AGL+QRFCQQCSRFH+L+EFDNGKRSCRKRLADHNRRRRK  H S   +
Sbjct: 225 EFHSKASTVVAAGLSQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKC-HQSASAT 284

Query: 246 PKTXXXXXXXXXXXXXXXXXAWSVTVAVSPAKMSLECLNQRPY 285
             T                 A S   + +P  +SLEC  QR +
Sbjct: 285 QDT-GTGKTTPKSPNDSGVKASSSPSSNAPPTISLECFRQRQF 311

[Close]

BLAST of Carg13868 vs. TAIR10
Match: AT3G60030.1 (squamosa promoter-binding protein-like 12)

HSP 1 Score: 124.8 bits (312), Expect = 8.6e-29
Identity = 64/117 (54.70%), Postives = 78/117 (66.67%), Query Frame = 0


Query: 116 AARIGLNLGGRTYFSSEEEEFVNQLYRRARTGGEPGSGNWSARCQAEGCNADLSQAKQYH 175
           A R+ LNLGG     +          ++ + GG  G  + +  CQ + C ADLS+ K YH
Sbjct: 94  AHRLTLNLGGNNIEGNG--------VKKTKLGG--GIPSRAICCQVDNCGADLSKVKDYH 153

Query: 176 RRHKVCEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADHNRRRRK 233
           RRHKVCE HSKA+T +  G+ QRFCQQCSRFHVL EFD GKRSCR+RLA HN+RRRK
Sbjct: 154 RRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFDEGKRSCRRRLAGHNKRRRK 200

[Close]

BLAST of Carg13868 vs. TAIR10
Match: AT2G47070.1 (squamosa promoter binding protein-like 1)

HSP 1 Score: 121.7 bits (304), Expect = 7.3e-28
Identity = 55/77 (71.43%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 157 ARCQAEGCNADLSQAKQYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGK 216
           A CQ E C ADLS+ K YHRRHKVCE HSKA++    G+ QRFCQQCSRFH+L EFD GK
Sbjct: 104 AVCQVENCEADLSKVKDYHRRHKVCEMHSKATSATVGGILQRFCQQCSRFHLLQEFDEGK 163

Query: 217 RSCRKRLADHNRRRRKT 234
           RSCR+RLA HN+RRRKT
Sbjct: 164 RSCRRRLAGHNKRRRKT 180

[Close]

BLAST of Carg13868 vs. TAIR10
Match: AT1G53160.2 (squamosa promoter binding protein-like 4)

HSP 1 Score: 119.4 bits (298), Expect = 3.6e-27
Identity = 62/111 (55.86%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 130 SSEEEEFVNQLYRRARTGGEPGSGNWSARCQAEGCNADLSQAKQYHRRHKVCEFHSKAST 189
           + EEEE      R +R  G    G     CQ + C AD+ +AK YHRRHKVCE H+KAS+
Sbjct: 27  TDEEEEVGRDRVRGSR--GSINRGGSLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASS 86

Query: 190 VITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADHNRRRRKTQHISNQG 241
           V  +GL QRFCQQCSRFH L EFD  KRSCR+RLA HN RRRK+   S  G
Sbjct: 87  VFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYG 135

[Close]

BLAST of Carg13868 vs. TAIR10
Match: AT2G33810.1 (squamosa promoter binding protein-like 3)

HSP 1 Score: 118.2 bits (295), Expect = 8.0e-27
Identity = 54/78 (69.23%), Postives = 63/78 (80.77%), Query Frame = 0


Query: 156 SARCQAEGCNADLSQAKQYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNG 215
           S  CQ E C AD+S+AKQYH+RHKVC+FH+KA  V  +GL QRFCQQCSRFH L+EFD  
Sbjct: 51  SGVCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCSRFHALSEFDEA 110

Query: 216 KRSCRKRLADHNRRRRKT 234
           KRSCR+RLA HN RRRK+
Sbjct: 111 KRSCRRRLAGHNERRRKS 128

[Close]

BLAST of Carg13868 vs. Swiss-Prot
Match: sp|Q8GXL3|SPL8_ARATH (Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SPL8 PE=1 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 4.9e-50
Identity = 120/223 (53.81%), Postives = 141/223 (63.23%), Query Frame = 0


Query: 66  HPHSFIMGPS-HHYDTVADAVHGGGVGGGEFVVVPKSEEVCRSITAVPVDFAA-RIGLNL 125
           HPHS     S   YD       G G G     ++PK+E          VDF + RIGLNL
Sbjct: 105 HPHSSAPPASLFSYDQTGP---GSGSGSSYNFLIPKTE----------VDFTSNRIGLNL 164

Query: 126 GGRTYFSSEEEEFVNQLYRRARTGGEPGSGN--WSARCQAEGCNADLSQAKQYHRRHKVC 185
           GGRTYFS+ +++FV++LYRR+R  GE G  N   + RCQAEGCNADLS AK YHRRHKVC
Sbjct: 165 GGRTYFSAADDDFVSRLYRRSRP-GESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVC 224

Query: 186 EFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADHNRRRRKTQHISNQGS 245
           EFHSKASTV+ AGL+QRFCQQCSRFH+L+EFDNGKRSCRKRLADHNRRRRK  H S   +
Sbjct: 225 EFHSKASTVVAAGLSQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKC-HQSASAT 284

Query: 246 PKTXXXXXXXXXXXXXXXXXAWSVTVAVSPAKMSLECLNQRPY 285
             T                 A S   + +P  +SLEC  QR +
Sbjct: 285 QDT-GTGKTTPKSPNDSGVKASSSPSSNAPPTISLECFRQRQF 311

[Close]

BLAST of Carg13868 vs. Swiss-Prot
Match: sp|A2YFT9|SPL10_ORYSI (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica OX=39946 GN=SPL10 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.5e-33
Identity = 75/114 (65.79%), Postives = 82/114 (71.93%), Query Frame = 0


Query: 116 AARIGLNLGGRTYFSSEEEEFVNQLYRRARTGGEPGSGNWSA-----RCQAEGCNADLSQ 175
           A RIGLNLG RTYFS  +   V++L  R+R GG  G G   A     RCQAEGC ADLS 
Sbjct: 133 AGRIGLNLGRRTYFSPGDMLAVDRLLMRSRLGGVFGLGFGGAHHQPPRCQAEGCKADLSG 192

Query: 176 AKQYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLA 225
           AK YHRRHKVCE+H+KAS V  +G  QRFCQQCSRFHVL EFD  KRSCRKRLA
Sbjct: 193 AKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSRFHVLTEFDEAKRSCRKRLA 246

[Close]

BLAST of Carg13868 vs. Swiss-Prot
Match: sp|Q0DAE8|SPL10_ORYSJ (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL10 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.5e-33
Identity = 75/114 (65.79%), Postives = 82/114 (71.93%), Query Frame = 0


Query: 116 AARIGLNLGGRTYFSSEEEEFVNQLYRRARTGGEPGSGNWSA-----RCQAEGCNADLSQ 175
           A RIGLNLG RTYFS  +   V++L  R+R GG  G G   A     RCQAEGC ADLS 
Sbjct: 133 AGRIGLNLGRRTYFSPGDMLAVDRLLMRSRLGGVFGLGFGGAHHQPPRCQAEGCKADLSG 192

Query: 176 AKQYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLA 225
           AK YHRRHKVCE+H+KAS V  +G  QRFCQQCSRFHVL EFD  KRSCRKRLA
Sbjct: 193 AKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSRFHVLTEFDEAKRSCRKRLA 246

[Close]

BLAST of Carg13868 vs. Swiss-Prot
Match: sp|Q01KM7|SPL8_ORYSI (Squamosa promoter-binding-like protein 8 OS=Oryza sativa subsp. indica OX=39946 GN=SPL8 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 7.9e-32
Identity = 74/120 (61.67%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 116 AARIGLNLGGRTYFSSEEEEFVNQLYRRARTGGEPGSGNWSARCQAEGCNADLSQAKQYH 175
           A ++GLNLG RTYF                  G    G+   RCQAEGC ADLS AK+YH
Sbjct: 157 ATQLGLNLGYRTYFPPR---------------GGYTYGHHPPRCQAEGCKADLSSAKRYH 216

Query: 176 RRHKVCEFHSKASTVITA-GLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADHNRRRRKTQ 235
           RRHKVCE HSKA  V+TA GL QRFCQQCSRFH+L EFD+ K+SCRKRLADHNRRRRK++
Sbjct: 217 RRHKVCEHHSKAPVVVTAGGLHQRFCQQCSRFHLLDEFDDAKKSCRKRLADHNRRRRKSK 261

[Close]

BLAST of Carg13868 vs. Swiss-Prot
Match: sp|Q7XPY1|SPL8_ORYSJ (Squamosa promoter-binding-like protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL8 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 7.9e-32
Identity = 74/120 (61.67%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 116 AARIGLNLGGRTYFSSEEEEFVNQLYRRARTGGEPGSGNWSARCQAEGCNADLSQAKQYH 175
           A ++GLNLG RTYF                  G    G+   RCQAEGC ADLS AK+YH
Sbjct: 157 ATQLGLNLGYRTYFPPR---------------GGYTYGHHPPRCQAEGCKADLSSAKRYH 216

Query: 176 RRHKVCEFHSKASTVITA-GLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADHNRRRRKTQ 235
           RRHKVCE HSKA  V+TA GL QRFCQQCSRFH+L EFD+ K+SCRKRLADHNRRRRK++
Sbjct: 217 RRHKVCEHHSKAPVVVTAGGLHQRFCQQCSRFHLLDEFDDAKKSCRKRLADHNRRRRKSK 261

[Close]

BLAST of Carg13868 vs. TrEMBL
Match: tr|A0A1S3C8D3|A0A1S3C8D3_CUCME (squamosa promoter-binding-like protein 8 OS=Cucumis melo OX=3656 GN=LOC103497656 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.8e-74
Identity = 172/298 (57.72%), Postives = 191/298 (64.09%), Query Frame = 0


Query: 1   MLEYEWGSTNAPPILLPGDESEPAFNPEAPHSHHLPTFMD---HXXXXXXLPTLTPPPFT 60
           ML+YEWGSTN PPI+L G+ESEP FN +  HSH+ PTF+D    XXXXXX          
Sbjct: 1   MLDYEWGSTNPPPIILSGEESEPVFNSDPSHSHNFPTFIDLHXXXXXXXXXXXXXXXXXX 60

Query: 61  THFGGFDDHPHSFIMGPSHHYDTVADAVHGGGVGGGEFVVVPKSEEVCRSITAVPVDFAA 120
                                               EF++VPKSE+VC S+ A PV+FAA
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFMLVPKSEDVCGSM-AAPVEFAA 120

Query: 121 RIGLNLGGRTYFSSEEEEFVNQLYRRARTGGE-PGSGNWSARCQAEGCNADLSQAKQYHR 180
           RIGLNLGGRTYFSSEEEEFVN+LYR+ R+G E  GSGNW+ RCQAEGCNADLSQAK YHR
Sbjct: 121 RIGLNLGGRTYFSSEEEEFVNRLYRKTRSGSEMGGSGNWAVRCQAEGCNADLSQAKHYHR 180

Query: 181 RHKVCEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADH---------- 240
           RHKVCEFHSKASTVITAGLTQRFCQQCSRFHV+ EFDNGKRSCRKRLADH          
Sbjct: 181 RHKVCEFHSKASTVITAGLTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHXXXXXXXXXX 240

Query: 241 NRRRRKTQHISNQGSPKTXXXXXXXXXXXXXXXXXAWSVTVAVSPAKMSLECLNQRPY 285
                             XXXXXX           AWSVTVAVSP +MSL+CLNQRP+
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXTRSTMESTGQSAWSVTVAVSPTRMSLDCLNQRPF 297

[Close]

BLAST of Carg13868 vs. TrEMBL
Match: tr|A0A0A0KA35|A0A0A0KA35_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109120 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.0e-73
Identity = 167/297 (56.23%), Postives = 181/297 (60.94%), Query Frame = 0


Query: 1   MLEYEWGSTNAPPILLPGDESEPAFNPEAPHSHHLPTFMDHXXXXXXLPTLTPPPFTTHF 60
           ML+YEWGSTN PPI+L G+ESEP FN    HSH+ PTF+D  XXXXX             
Sbjct: 1   MLDYEWGSTNPPPIILSGEESEPVFNSVPSHSHNFPTFVDLHXXXXXXXXXXXXXXXXXX 60

Query: 61  GGFDDHPHSFIMGPSHHYDTVADAVHGGGVGGGEFVVVPKSEEVCRSI-TAVPVDFAARI 120
                                              ++VPKSE VC SI  A P +FAARI
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLVPKSENVCGSIGAAAPAEFAARI 120

Query: 121 GLNLGGRTYFSSEEEEFVNQLYRRARTGGE-PGSGNWSARCQAEGCNADLSQAKQYHRRH 180
           GLNLGGRTYFSSEEEEFVN+LYRR RTG E  GSGNW+ RCQAEGCNADLSQAK YHRRH
Sbjct: 121 GLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRH 180

Query: 181 KVCEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADHN----------R 240
           KVCEFHSKASTVITAGLTQRFCQQCSRFHV+ EFDNGKRSCRKRLADHN           
Sbjct: 181 KVCEFHSKASTVITAGLTQRFCQQCSRFHVVGEFDNGKRSCRKRLADHNXXXXXXXXXXX 240

Query: 241 RRRKTQHISNQGSPKTXXXXXXXXXXXXXXXXXAWSVTVAV-SPAKMSLECLNQRPY 285
                           XX                WSVTVAV SP +MSL+CLNQ+PY
Sbjct: 241 XXXXXXXXXXXXXXXXXXHSAATRSTMESTGQSTWSVTVAVSSPTRMSLDCLNQQPY 297

[Close]

BLAST of Carg13868 vs. TrEMBL
Match: tr|A0A2I4HD80|A0A2I4HD80_9ROSI (squamosa promoter-binding-like protein 8 OS=Juglans regia OX=51240 GN=LOC109016106 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.0e-68
Identity = 176/311 (56.59%), Postives = 201/311 (64.63%), Query Frame = 0


Query: 1   MLEYEWGSTNAPPILLPGDESEPAFNPEAPHSHHLPTFMDHXXXXXXLPTLTPPPFTTHF 60
           MLEYEWG+T    I+L G+E     N ++  +  +    DH        +  P P TT F
Sbjct: 1   MLEYEWGNTGT--IMLSGEEET---NQDSDQTRQI---FDHYAQPFHNSSFNPQPTTTAF 60

Query: 61  GGFD-DHPHSFIMGPSHH--YDTVA----------------DAVHG-GGVGGGEFVVVPK 120
             F+    H       HH  +D  A                D V G  G GGG ++VVPK
Sbjct: 61  SHFNPQQTHXXXXXQLHHSLFDPRAYPPSASPYAPPQLLSLDPVTGAAGSGGGGYLVVPK 120

Query: 121 SEEVCRSITAVPVDFAARIGLNLGGRTYFSSEEEEFVNQLYRRARTGGEPGSGNWSARCQ 180
           SEE+ R     PVDF +R+GLNLGGRTYFSS E+EFVN+LYRRAR   EPGS N S RCQ
Sbjct: 121 SEEISR-----PVDFVSRLGLNLGGRTYFSSAEDEFVNRLYRRARP-AEPGSAN-SPRCQ 180

Query: 181 AEGCNADLSQAKQYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCR 240
           AEGCNADL+ AK YHRRHKVCEFHSKASTVI AGLTQRFCQQCSRFH+L+EFDNGKRSCR
Sbjct: 181 AEGCNADLTHAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCR 240

Query: 241 KRLADHNRRRRKTQHISN-------QGSPKTXXXXXXXXXXXXXXXXXAWSVTVAVSPAK 285
           KRLADHNRRRRKT    N       Q +P  XXXXXXXXXXXXX    + SVTVA+SP +
Sbjct: 241 KRLADHNRRRRKTHQQPNPESLKSQQENPHNXXXXXXXXXXXXXGAHSSSSVTVALSPPR 296

[Close]

BLAST of Carg13868 vs. TrEMBL
Match: tr|A0A2N9FKB0|A0A2N9FKB0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15076 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.0e-64
Identity = 137/209 (65.55%), Postives = 152/209 (72.73%), Query Frame = 0


Query: 83  DAVHGGGVGGGEFVVVPKSEEVCRSITAVPVDFAARIGLNLGGRTYFSSEEEEFVNQLYR 142
           D V GG   GG ++VVPKSE+  R     PVDF +RIGLNLGGRTYFSS E+EFVN+LYR
Sbjct: 94  DPVPGGAGNGGGYLVVPKSEDSSRP----PVDFVSRIGLNLGGRTYFSSAEDEFVNRLYR 153

Query: 143 RARTGGEPGSGNWSARCQAEGCNADLSQAKQYHRRHKVCEFHSKASTVITAGLTQRFCQQ 202
           RAR   EPGSGN S RCQAEGCNADL+ AK YHRRHKVCE+HSKASTV+ AGLTQRFCQQ
Sbjct: 154 RARPATEPGSGN-SPRCQAEGCNADLTHAKHYHRRHKVCEYHSKASTVLAAGLTQRFCQQ 213

Query: 203 CSRFHVLAEFDNGKRSCRKRLADHNRRRRKTQHISNQGSPKT-------XXXXXXXXXXX 262
           CSRFH+L+EFDNGKRSCRKRLADHNRRRRKTQ    Q  PK+                  
Sbjct: 214 CSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQ-PGQEIPKSQPDIAQNSSPGNLTRSPP 273

Query: 263 XXXXXXAWSVTVAVSPAKMSLECLNQRPY 285
                 + SVTVAVSP +MSL+C  QRPY
Sbjct: 274 DSGAPSSSSVTVAVSPPRMSLDCFKQRPY 296

[Close]

BLAST of Carg13868 vs. TrEMBL
Match: tr|A0A2I6SES7|A0A2I6SES7_9ROSI (SBP-box transcription factor OS=Betula luminifera OX=312789 GN=SPL2 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.9e-62
Identity = 153/306 (50.00%), Postives = 184/306 (60.13%), Query Frame = 0


Query: 1   MLEYEWGSTNAPPILLPGDESEPAFNPEAPHSHHLPTFMDHXXXXXXLPTLTPPPFTTHF 60
           ML+YEWG  N   ++L G+E      P+   +  +  F  +        +  P P TT F
Sbjct: 1   MLDYEWG--NPGTMMLSGEEETA---PDQDQTRQI--FDPYTQPFNVNSSFNPQPATTAF 60

Query: 61  GGFDDHP-------HSFI--------MGPSHHYD---TVADAVHGGGVGGGEFVVVPKSE 120
             F+          HSF            S+H     ++   V+G    GG +++VPKSE
Sbjct: 61  SHFNPPQQTQSQLYHSFFDPRAYPTPSASSYHPTQLLSLDHPVNGATGSGGGYLLVPKSE 120

Query: 121 EVCRSITAVPVDFAARIGLNLGGRTYFSSEEEEFVNQLYRRARTGGEPGSGNWSARCQAE 180
           E      + PVDF +R+GLNLGGRTYFSS E+EFVN+LYRR+R   EPGS N S RCQAE
Sbjct: 121 EA----VSRPVDFVSRLGLNLGGRTYFSSAEDEFVNRLYRRSRP-TEPGSAN-SPRCQAE 180

Query: 181 GCNADLSQAKQYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKR 240
           GCNADL+ AK YHRRHKVCEFHSKASTV+ AGLTQRFCQQCSRFH+L+EFDNGKRSCRKR
Sbjct: 181 GCNADLTHAKHYHRRHKVCEFHSKASTVVAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKR 240

Query: 241 LADHNRRRRKTQHISN----QGSPKTXXXXXXXXXXXXXXXXXAWSVTVAVSPAKMSLEC 285
           LADHNRRRRKT H  N    +  P                     SVTVAVSP +MSL+C
Sbjct: 241 LADHNRRRRKT-HQPNPEQLKSQPDNARNSSSERSPPDSGAYSTSSVTVAVSPPRMSLDC 292

The following BLAST results are available for this feature:

BLAST of Carg13868 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513854.1	4.7e-134	91.90	squamosa promoter-binding-like protein 8 [Cucurbita pepo subsp. pepo] >XP_023513...	[more]
XP_023000065.1	2.0e-132	88.38	squamosa promoter-binding-like protein 8 [Cucurbita maxima] >XP_023000066.1 squa...	[more]
XP_022964056.1	8.1e-126	88.73	squamosa promoter-binding-like protein 8 [Cucurbita moschata] >XP_022964057.1 sq...	[more]
XP_008458127.1	4.2e-74	57.72	PREDICTED: squamosa promoter-binding-like protein 8 [Cucumis melo] >XP_008458128...	[more]
XP_004140489.1	6.1e-73	56.23	PREDICTED: squamosa promoter-binding-like protein 8 [Cucumis sativus] >XP_011656...	[more]

BLAST of Carg13868 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02065.1	2.7e-51	53.81	squamosa promoter binding protein-like 8	[more]
AT3G60030.1	8.6e-29	54.70	squamosa promoter-binding protein-like 12	[more]
AT2G47070.1	7.3e-28	71.43	squamosa promoter binding protein-like 1	[more]
AT1G53160.2	3.6e-27	55.86	squamosa promoter binding protein-like 4	[more]
AT2G33810.1	8.0e-27	69.23	squamosa promoter binding protein-like 3	[more]

BLAST of Carg13868 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GXL3\|SPL8_ARATH	4.9e-50	53.81	Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SPL8...	[more]
sp\|A2YFT9\|SPL10_ORYSI	2.5e-33	65.79	Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica OX=39946...	[more]
sp\|Q0DAE8\|SPL10_ORYSJ	2.5e-33	65.79	Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica OX=399...	[more]
sp\|Q01KM7\|SPL8_ORYSI	7.9e-32	61.67	Squamosa promoter-binding-like protein 8 OS=Oryza sativa subsp. indica OX=39946 ...	[more]
sp\|Q7XPY1\|SPL8_ORYSJ	7.9e-32	61.67	Squamosa promoter-binding-like protein 8 OS=Oryza sativa subsp. japonica OX=3994...	[more]

BLAST of Carg13868 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C8D3\|A0A1S3C8D3_CUCME	2.8e-74	57.72	squamosa promoter-binding-like protein 8 OS=Cucumis melo OX=3656 GN=LOC103497656...	[more]
tr\|A0A0A0KA35\|A0A0A0KA35_CUCSA	4.0e-73	56.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109120 PE=4 SV=1	[more]
tr\|A0A2I4HD80\|A0A2I4HD80_9ROSI	1.0e-68	56.59	squamosa promoter-binding-like protein 8 OS=Juglans regia OX=51240 GN=LOC1090161...	[more]
tr\|A0A2N9FKB0\|A0A2N9FKB0_FAGSY	2.0e-64	65.55	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15076 PE=4 SV=1	[more]
tr\|A0A2I6SES7\|A0A2I6SES7_9ROSI	1.9e-62	50.00	SBP-box transcription factor OS=Betula luminifera OX=312789 GN=SPL2 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR004333	SBP_dom
IPR036893	SBP_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13868-RA	Carg13868-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036893	SBP domain superfamily	GENE3D	G3DSA:4.10.1100.10		coord: 150..220 e-value: 8.1E-37 score: 127.0
IPR036893	SBP domain superfamily	SUPERFAMILY	SSF103612	SBT domain	coord: 157..234
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 159..232 e-value: 1.8E-31 score: 108.1
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 156..233 score: 32.12
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..263
None	No IPR available	PANTHER	PTHR31251:SF4	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8	coord: 14..276
None	No IPR available	PANTHER	PTHR31251	FAMILY NOT NAMED	coord: 14..276

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg13868	CmaCh08G008640	Cucurbita maxima (Rimu)	carcmaB0842
Carg13868	CmoCh08G008330	Cucurbita moschata (Rifu)	carcmoB0820
Carg13868	Cp4.1LG17g04000	Cucurbita pepo (Zucchini)	carcpeB0851
Carg13868	CsGy6G008870	Cucumber (Gy14) v2	carcgybB0603

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg13868	Wild cucumber (PI 183967)	carcpiB0637
Carg13868	Cucumber (Chinese Long) v2	carcuB0631
Carg13868	Cucumber (Chinese Long) v3	carcucB0638
Carg13868	Bottle gourd (USVL1VR-Ls)	carlsiB545
Carg13868	Melon (DHL92) v3.5.1	carmeB0603
Carg13868	Melon (DHL92) v3.6.1	carmedB0609
Carg13868	Watermelon (Charleston Gray)	carwcgB0586
Carg13868	Watermelon (97103) v1	carwmB0601
Carg13868	Watermelon (97103) v2	carwmbB0628
Carg13868	Wax gourd	carwgoB0713
Carg13868	Silver-seed gourd	carcarB518
Carg13868	Cucumber (Gy14) v1	carcgyB0677
Carg13868	Cucurbita maxima (Rimu)	carcmaB0841
Carg13868	Cucurbita moschata (Rifu)	carcmoB0819
Carg13868	Cucurbita pepo (Zucchini)	carcpeB0850