Carg13795 (gene) Silver-seed gourd

Overview
NameCarg13795
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRas-related protein like
LocationCucurbita_argyrosperma_scaffold_058 : 583266 .. 586286 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTACTGTTGGATTACATTTAAAATAGGCTGTAATTTGGTTTGATAATGTAAAATGGTGTTTGATGACGTTGCTTCAATATTTTTTGAATCCGCGTGGTGCTTGCAATCCATTGCGAGAGCATATGCTGCAAATTTTATGTTTGTCTGGAATGGAGTATTTCTTCATGGTTTGATATAACCTTTCCAGGTGTGGGGAAGAGTTGCCTTCTCTTGCGTTTCTCGGATGGTTCCTTTACTACAAGTTTCATCACAACCATTGGGTAGGTGCTTGTTAAACTACAACTTGTATGAGTATGTGGTTTTCCCACATTATTCTTGATTGAGTAGGCTGAACGTTCTTCGACAGCATTGATTTTAAGATAAGGACCATAGAGCTGGATGGAAAAAGGATCAAGCTACAAATTTGGGATACTGCTGGACAGGAGCGGTTCAGAACAATTACTACTGGTTAGTGTCTAAAGTTCGTAATTTATTATCTTGTGCTGTTGTTGTGATGTGCATGGGTGGTTGACGTTTCTAGGATAGTGGCCTAGGCATATGTGTTATTCTTTAAAAATTGTCTTAGGTTGGACTAAAAGGTCTCGATATCTTTTATCAGTATTTGACATCTCCAAGTTTATAGGATCAAGCATGTTTATCTATTGACTTGTACCTACTATGTTAATCAATTGGTCAAGTTAATTGAAACCTCCCTTACAATAGGTTTGAGGTTCAAATTCCCACTCCATTTGAATTTTTTGTAAAAAAAAAAGGAACTGTTAAATTTGGATCCTTTCTTATTAGGTATTTTGACTAGTTTGCGTGTTGAGACCTTGATTCCTTGCTGTCTAACAAATTTTAGTTTTTGAGGTCCCATTGTCATATGGGCTCAGATAAATAGATAAACATTTGATATTTTAGTTTTAAGAAAAAAAATGCAAGAATCACCATTGAACTATAACATTGATGCCTTGCCTCTTACCTTATTCCAATGTTTTTGACTGAATTCGTATAATTTAACCATTGCCTTACCTATCTCAAAAGATCTTCATAGCCCATGTAAAGAGTCCAGCCAATTGTTCTTGATTTGGGCGGTTGATAAGTATGCTCGATATGAGAGTGGTGGACAACTTCCTACTTTATAACTCATTGCTCATTCTTTGACGACTTATGCCAATTCTATAGACCACACTCTTTGATGGAGCCAATCCAAAAAACGAATGGGACCTTGATTAATTAGTTATTTAACTATATTTTATTGTTACAATTTTTTTTCTTTGGTAAATTAATAATTATTTTCAAGTATACACTGCACATTAAGTATGATTTAGATTGTCCAATTATCAATGGTATTTTAGTTCTCAGATTTAAAATAATATTTTAGTTTGCAAATTTTCCTGGATATAAAAGTGGAGTATAGTTGCACAAATTCTAAGTTCTCAAGGATTTAAATATAAGAACCTCTGTAACTTAGAAATGATTTGTGCATTTTTTGAGCTGCCACTTATAGATTTTTAAGTGATAGGACTTAATTGCAACAGTTTTGCAAGTTTTGGGATACGTAAACCCATATAACTCAGGTTTATTTTTTGGATTTTCCCCCAAGTTTAACTGATTCTGCGCTTTCTTATCCTCTGCAGCTTACTATCGTGGAGCCATGGGTATTTTGCTTGTGTACGATGTAACTGATGAGTCCTCCTTTAACAGTAATGTTTCCCTACCCTCTTTTAGCTTCAGTTGTTATTGTCTTTTACCACTCCATGTATTGAATTTTTATTTTGGGAATAAATCTCTGTAGACGATGAATCTTCTTAGCTTCTCGAAAAATTATGAACTAAGCTGATTTCTTTCTGCAGACATTAGGAACTGGATTCGTAACATTGAACAACATGCTTCAGACAATGTTAACAAAATTCTGGTCGGTAACAAAGCTGACATGGATGAGAGCAAAAGGGTACCCTCTCTCTTTTTCTCTCTATCGGTTTTCCTGTCTGTATTTTTCAGGTGACATGTTTTTGACAAGAATTTTTTTTTTCAGGCTGTTCCCACCTCAAAGGGTCAAGCTCTTGCAGATGAATATGGCATCAGGTTCTTTGAGACTGTGAGTTACACGTCTTGGCTTGGGAAATTATGATATGATGTCTGGTGGACATTCTATTCTAAAGATCTTGTGTTTTACAGAGTGCTAAGACGAACTTAAACGTGGAAGAAGTTTTCTTCTCAATAGCTAGAGATATTAAACAAAGACTCGCTGATACTGATTCAAAAGCCGAGGTATAGACTCTTAAATCACTAGGTTGAAAACTGCTTTCGGTTTCTGTGATCAGAGTAGTGCGAATTCCGAAAAAAAATATTTTTATGTTTTCAATGTATCTAGATTTAGAGAATTGAAAATTTAAAATACAGATTTATATTACAAAAAATCAAAAGTTAAATAAATATAGCATTTCATGCTATAACTCAATTTATTTTGGGTAAATTAAAATATGTATGATATAATATATTATAAATTATATGATATTGTAAAATAATAATTATGCAAAATTTTGACATAAAACATTTTCATAAATTAATTATTAGTAATTTATATTCAACCTAATATTTAGTGCTATATCAAACACATTTTGAAAACTTGCTTAAATTAGAATCCAATTTCTAAGTTTGCTACCCAACGCATATTTGAAAACATGAAAATACAACTATGTTTCTTTGCTTATCTTGTTTTCAAAATTCTATTTTTGGATTTCCTATCAAATAGACCCTTAATTATTGTTTTCTGGGTAAAAAAGTATCCCGCCAATTGCATTACTTTCTCGTTTGCTTCATATATATTTTTTTTCACTGATGTGTTTGTGTTTTATAGTGCCTTGTGATTTTGTAAGTTTGCATAGTACATGCTTTAATTTAGTGGCATTCTTTCCATGTGATTGATATATACTCTACTTTTGGATGTCGCAGCCTCAGACAATCAAGATTAATCAACCAGATCAGGGTGCAGGGGCTGCTCAAGCTGCTCAAAGATCAGCATGCTGCGGTTCTTAA

mRNA sequence

CTACTGTTGGATTACATTTAAAATAGGCTGTAATTTGGTTTGATAATGTAAAATGGTGTTTGATGACGTTGCTTCAATATTTTTTGAATCCGCGTGGTGCTTGCAATCCATTGCGAGAGCATATGCTGCAAATTTTATGTTTGTCTGGAATGGAGTATTTCTTCATGGTTTGATATAACCTTTCCAGGTGTGGGGAAGAGTTGCCTTCTCTTGCGTTTCTCGGATGGTTCCTTTACTACAAGTTTCATCACAACCATTGGCATTGATTTTAAGATAAGGACCATAGAGCTGGATGGAAAAAGGATCAAGCTACAAATTTGGGATACTGCTGGACAGGAGCGGTTCAGAACAATTACTACTGCTTACTATCGTGGAGCCATGGGTATTTTGCTTGTGTACGATGTAACTGATGAGTCCTCCTTTAACAACATTAGGAACTGGATTCGTAACATTGAACAACATGCTTCAGACAATGTTAACAAAATTCTGGTCGGTAACAAAGCTGACATGGATGAGAGCAAAAGGGCTGTTCCCACCTCAAAGGGTCAAGCTCTTGCAGATGAATATGGCATCAGGTTCTTTGAGACTAGTGCTAAGACGAACTTAAACGTGGAAGAAGTTTTCTTCTCAATAGCTAGAGATATTAAACAAAGACTCGCTGATACTGATTCAAAAGCCGAGCCTCAGACAATCAAGATTAATCAACCAGATCAGGGTGCAGGGGCTGCTCAAGCTGCTCAAAGATCAGCATGCTGCGGTTCTTAA

Coding sequence (CDS)

ATGGGTATTTTGCTTGTGTACGATGTAACTGATGAGTCCTCCTTTAACAACATTAGGAACTGGATTCGTAACATTGAACAACATGCTTCAGACAATGTTAACAAAATTCTGGTCGGTAACAAAGCTGACATGGATGAGAGCAAAAGGGCTGTTCCCACCTCAAAGGGTCAAGCTCTTGCAGATGAATATGGCATCAGGTTCTTTGAGACTAGTGCTAAGACGAACTTAAACGTGGAAGAAGTTTTCTTCTCAATAGCTAGAGATATTAAACAAAGACTCGCTGATACTGATTCAAAAGCCGAGCCTCAGACAATCAAGATTAATCAACCAGATCAGGGTGCAGGGGCTGCTCAAGCTGCTCAAAGATCAGCATGCTGCGGTTCTTAA

Protein sequence

MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAAQRSACCGS
Homology
[Close]
BLAST of Carg13795 vs. NCBI nr
Match: XP_022949825.1 (ras-related protein RABE1a-like [Cucurbita moschata] >XP_022949826.1 ras-related protein RABE1a-like [Cucurbita moschata] >XP_022949827.1 ras-related protein RABE1a-like [Cucurbita moschata] >XP_022949828.1 ras-related protein RABE1a-like [Cucurbita moschata])

HSP 1 Score: 249.2 bits (635), Expect = 7.5e-63
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 120
           DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA
Sbjct: 149 DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 208

Query: 121 QRSACCGS 129
           QRSACCGS
Sbjct: 209 QRSACCGS 216

[Close]
BLAST of Carg13795 vs. NCBI nr
Match: XP_004142084.1 (PREDICTED: ras-related protein RABE1a [Cucumis sativus] >XP_022978615.1 ras-related protein RABE1a [Cucurbita maxima] >XP_022978616.1 ras-related protein RABE1a [Cucurbita maxima] >XP_022978617.1 ras-related protein RABE1a [Cucurbita maxima] >XP_023544954.1 ras-related protein RABE1a [Cucurbita pepo subsp. pepo] >XP_023544955.1 ras-related protein RABE1a [Cucurbita pepo subsp. pepo] >XP_023544956.1 ras-related protein RABE1a [Cucurbita pepo subsp. pepo] >KGN54226.1 hypothetical protein Csa_4G293850 [Cucumis sativus])

HSP 1 Score: 248.1 bits (632), Expect = 1.7e-62
Identity = 127/128 (99.22%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 120
           DEYGI+FFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA
Sbjct: 149 DEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 208

Query: 121 QRSACCGS 129
           QRSACCGS
Sbjct: 209 QRSACCGS 216

[Close]
BLAST of Carg13795 vs. NCBI nr
Match: XP_022143832.1 (ras-related protein RABE1a-like [Momordica charantia])

HSP 1 Score: 246.9 bits (629), Expect = 3.7e-62
Identity = 126/128 (98.44%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 120
           DEYGI+FFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA
Sbjct: 149 DEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 208

Query: 121 QRSACCGS 129
           Q+SACCGS
Sbjct: 209 QKSACCGS 216

[Close]
BLAST of Carg13795 vs. NCBI nr
Match: XP_008447565.1 (PREDICTED: ras-related protein RABE1a [Cucumis melo] >XP_016900837.1 PREDICTED: ras-related protein RABE1a [Cucumis melo])

HSP 1 Score: 246.5 bits (628), Expect = 4.9e-62
Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 120
           DEYGI+FFETSAKTNLNVEEVFFSIARDIKQRLADTDSK EPQTIKINQPDQGAGAAQAA
Sbjct: 149 DEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKTEPQTIKINQPDQGAGAAQAA 208

Query: 121 QRSACCGS 129
           QRSACCGS
Sbjct: 209 QRSACCGS 216

[Close]
BLAST of Carg13795 vs. NCBI nr
Match: XP_007205882.1 (ras-related protein RABE1a [Prunus persica] >XP_008241493.1 PREDICTED: ras-related protein RABE1a [Prunus mume] >XP_008387728.1 PREDICTED: ras-related protein RABE1a-like [Malus domestica] >XP_008387729.1 PREDICTED: ras-related protein RABE1a-like [Malus domestica] >XP_021819072.1 ras-related protein RABE1a [Prunus avium] >XP_021819073.1 ras-related protein RABE1a [Prunus avium] >ONI03302.1 hypothetical protein PRUPE_6G249800 [Prunus persica] >ONI03303.1 hypothetical protein PRUPE_6G249800 [Prunus persica] >ONI03304.1 hypothetical protein PRUPE_6G249800 [Prunus persica])

HSP 1 Score: 245.7 bits (626), Expect = 8.3e-62
Identity = 125/128 (97.66%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 120
           DEYGI+FFETSAKTNLNVEEVFFSIARDIKQRLADTDS+AEPQTIKINQPDQGAGAAQAA
Sbjct: 149 DEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKINQPDQGAGAAQAA 208

Query: 121 QRSACCGS 129
           Q+SACCGS
Sbjct: 209 QKSACCGS 216

[Close]
BLAST of Carg13795 vs. TAIR10
Match: AT3G53610.1 (RAB GTPase homolog 8)

HSP 1 Score: 229.6 bits (584), Expect = 1.1e-60
Identity = 115/128 (89.84%), Postives = 124/128 (96.88%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNWIRNIEQHASD+VNKILVGNKADMDESKRAVP SKGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKADMDESKRAVPKSKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 120
           DEYG++FFETSAKTNLNVEEVFFSIA+DIKQRLADTD++AEPQTIKINQ DQGAG +QA 
Sbjct: 149 DEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDARAEPQTIKINQSDQGAGTSQAT 208

Query: 121 QRSACCGS 129
           Q+SACCG+
Sbjct: 209 QKSACCGT 216

[Close]
BLAST of Carg13795 vs. TAIR10
Match: AT5G59840.1 (Ras-related small GTP-binding family protein)

HSP 1 Score: 229.6 bits (584), Expect = 1.1e-60
Identity = 117/128 (91.41%), Postives = 122/128 (95.31%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVP SKGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPKSKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 120
           DEYGI+FFETSAKTNLNVEEVFFSIA+DIKQRLADTDS+AEP TIKI+Q DQ AGA QA 
Sbjct: 149 DEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDSRAEPATIKISQTDQAAGAGQAT 208

Query: 121 QRSACCGS 129
           Q+SACCGS
Sbjct: 209 QKSACCGS 216

[Close]
BLAST of Carg13795 vs. TAIR10
Match: AT3G46060.1 (RAB GTPase homolog 8A)

HSP 1 Score: 228.0 bits (580), Expect = 3.2e-60
Identity = 115/128 (89.84%), Postives = 122/128 (95.31%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 120
           DEYGI+FFETSAKTNLNVEEVFFSI RDIKQRL+DTDS+AEP TIKI+Q DQ AGA QA 
Sbjct: 149 DEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSRAEPATIKISQTDQAAGAGQAT 208

Query: 121 QRSACCGS 129
           Q+SACCG+
Sbjct: 209 QKSACCGT 216

[Close]
BLAST of Carg13795 vs. TAIR10
Match: AT5G03520.1 (RAB GTPase homolog 8C)

HSP 1 Score: 202.6 bits (514), Expect = 1.5e-52
Identity = 103/126 (81.75%), Postives = 115/126 (91.27%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNW++NIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWMKNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 120
           DEYGI+FFETSAKTNLNVE VF SIA+DIKQRL +TD+KAEPQ IKI + D  A ++  A
Sbjct: 149 DEYGIKFFETSAKTNLNVENVFMSIAKDIKQRLTETDTKAEPQGIKITKQDT-AASSSTA 208

Query: 121 QRSACC 127
           ++SACC
Sbjct: 209 EKSACC 213

[Close]
BLAST of Carg13795 vs. TAIR10
Match: AT3G09900.1 (RAB GTPase homolog E1E)

HSP 1 Score: 196.1 bits (497), Expect = 1.4e-50
Identity = 100/127 (78.74%), Postives = 114/127 (89.76%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNW++NIEQHASD+VNKILVGNKADMDESKRAVPTSKGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVGNKADMDESKRAVPTSKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQG-AGAAQA 120
           DEYGI+FFETSAKTN NVE+VF SIA+DIKQRL ++D+KAEPQ IKI + D   A ++  
Sbjct: 149 DEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLTESDTKAEPQGIKITKQDANKASSSST 208

Query: 121 AQRSACC 127
            ++SACC
Sbjct: 209 NEKSACC 215

[Close]
BLAST of Carg13795 vs. Swiss-Prot
Match: sp|O24466|RAE1A_ARATH (Ras-related protein RABE1a OS=Arabidopsis thaliana OX=3702 GN=RABE1A PE=1 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.0e-59
Identity = 115/128 (89.84%), Postives = 124/128 (96.88%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNWIRNIEQHASD+VNKILVGNKADMDESKRAVP SKGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKADMDESKRAVPKSKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 120
           DEYG++FFETSAKTNLNVEEVFFSIA+DIKQRLADTD++AEPQTIKINQ DQGAG +QA 
Sbjct: 149 DEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDARAEPQTIKINQSDQGAGTSQAT 208

Query: 121 QRSACCGS 129
           Q+SACCG+
Sbjct: 209 QKSACCGT 216

[Close]
BLAST of Carg13795 vs. Swiss-Prot
Match: sp|P28186|RAE1C_ARATH (Ras-related protein RABE1c OS=Arabidopsis thaliana OX=3702 GN=RABE1C PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 5.8e-59
Identity = 115/128 (89.84%), Postives = 122/128 (95.31%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 120
           DEYGI+FFETSAKTNLNVEEVFFSI RDIKQRL+DTDS+AEP TIKI+Q DQ AGA QA 
Sbjct: 149 DEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSRAEPATIKISQTDQAAGAGQAT 208

Query: 121 QRSACCGS 129
           Q+SACCG+
Sbjct: 209 QKSACCGT 216

[Close]
BLAST of Carg13795 vs. Swiss-Prot
Match: sp|Q39433|RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris OX=161934 GN=RAB1BV PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 6.9e-52
Identity = 109/129 (84.50%), Postives = 116/129 (89.92%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQ-TIKINQPDQGAGAAQA 120
           DEYGI+FFETSAKTNLNVEEVFFSIARDIKQRLAD+D++ E Q +I I   DQ     QA
Sbjct: 149 DEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEAQPSITIKPADQSGN--QA 208

Query: 121 AQRSACCGS 129
           A +SACCGS
Sbjct: 209 AAKSACCGS 215

[Close]
BLAST of Carg13795 vs. Swiss-Prot
Match: sp|Q9LZD4|RAE1D_ARATH (Ras-related protein RABE1d OS=Arabidopsis thaliana OX=3702 GN=RABE1D PE=1 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 2.6e-51
Identity = 103/126 (81.75%), Postives = 115/126 (91.27%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNW++NIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWMKNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 120
           DEYGI+FFETSAKTNLNVE VF SIA+DIKQRL +TD+KAEPQ IKI + D  A ++  A
Sbjct: 149 DEYGIKFFETSAKTNLNVENVFMSIAKDIKQRLTETDTKAEPQGIKITKQDT-AASSSTA 208

Query: 121 QRSACC 127
           ++SACC
Sbjct: 209 EKSACC 213

[Close]
BLAST of Carg13795 vs. Swiss-Prot
Match: sp|Q9SF91|RAE1E_ARATH (Ras-related protein RABE1e OS=Arabidopsis thaliana OX=3702 GN=RABE1E PE=1 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.5e-49
Identity = 100/127 (78.74%), Postives = 114/127 (89.76%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNW++NIEQHASD+VNKILVGNKADMDESKRAVPTSKGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVGNKADMDESKRAVPTSKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQG-AGAAQA 120
           DEYGI+FFETSAKTN NVE+VF SIA+DIKQRL ++D+KAEPQ IKI + D   A ++  
Sbjct: 149 DEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLTESDTKAEPQGIKITKQDANKASSSST 208

Query: 121 AQRSACC 127
            ++SACC
Sbjct: 209 NEKSACC 215

[Close]
BLAST of Carg13795 vs. TrEMBL
Match: tr|A0A0A0L249|A0A0A0L249_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293850 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.1e-62
Identity = 127/128 (99.22%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 120
           DEYGI+FFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA
Sbjct: 149 DEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 208

Query: 121 QRSACCGS 129
           QRSACCGS
Sbjct: 209 QRSACCGS 216

[Close]
BLAST of Carg13795 vs. TrEMBL
Match: tr|A0A1S3BIM8|A0A1S3BIM8_CUCME (ras-related protein RABE1a OS=Cucumis melo OX=3656 GN=LOC103489977 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.2e-62
Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 120
           DEYGI+FFETSAKTNLNVEEVFFSIARDIKQRLADTDSK EPQTIKINQPDQGAGAAQAA
Sbjct: 149 DEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKTEPQTIKINQPDQGAGAAQAA 208

Query: 121 QRSACCGS 129
           QRSACCGS
Sbjct: 209 QRSACCGS 216

[Close]
BLAST of Carg13795 vs. TrEMBL
Match: tr|M5W133|M5W133_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G249800 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 5.5e-62
Identity = 125/128 (97.66%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 120
           DEYGI+FFETSAKTNLNVEEVFFSIARDIKQRLADTDS+AEPQTIKINQPDQGAGAAQAA
Sbjct: 149 DEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKINQPDQGAGAAQAA 208

Query: 121 QRSACCGS 129
           Q+SACCGS
Sbjct: 209 QKSACCGS 216

[Close]
BLAST of Carg13795 vs. TrEMBL
Match: tr|G7L0L9|G7L0L9_MEDTR (RAB GTPase-like protein A5B OS=Medicago truncatula OX=3880 GN=11432353 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 5.5e-62
Identity = 125/128 (97.66%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 120
           DEYGI+FFETSAKTNLNVEEVFFSIARDIKQRLADTDSK+EPQTIKINQPDQGAGAAQAA
Sbjct: 149 DEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKSEPQTIKINQPDQGAGAAQAA 208

Query: 121 QRSACCGS 129
           Q+SACCGS
Sbjct: 209 QKSACCGS 216

[Close]
BLAST of Carg13795 vs. TrEMBL
Match: tr|I3T4B6|I3T4B6_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 5.5e-62
Identity = 125/128 (97.66%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 1   MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 60
           MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA
Sbjct: 89  MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALA 148

Query: 61  DEYGIRFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQGAGAAQAA 120
           DEYGI+FFETSAKTNLNVEEVFFSIARDIKQRLADTDSK+EPQTIKINQPDQGAGAAQAA
Sbjct: 149 DEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKSEPQTIKINQPDQGAGAAQAA 208

Query: 121 QRSACCGS 129
           Q+SACCGS
Sbjct: 209 QKSACCGS 216

The following BLAST results are available for this feature:
BLAST of Carg13795 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022949825.17.5e-63100.00ras-related protein RABE1a-like [Cucurbita moschata] >XP_022949826.1 ras-related... [more]
XP_004142084.11.7e-6299.22PREDICTED: ras-related protein RABE1a [Cucumis sativus] >XP_022978615.1 ras-rela... [more]
XP_022143832.13.7e-6298.44ras-related protein RABE1a-like [Momordica charantia][more]
XP_008447565.14.9e-6298.44PREDICTED: ras-related protein RABE1a [Cucumis melo] >XP_016900837.1 PREDICTED: ... [more]
XP_007205882.18.3e-6297.66ras-related protein RABE1a [Prunus persica] >XP_008241493.1 PREDICTED: ras-relat... [more]
BLAST of Carg13795 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G53610.11.1e-6089.84RAB GTPase homolog 8[more]
AT5G59840.11.1e-6091.41Ras-related small GTP-binding family protein[more]
AT3G46060.13.2e-6089.84RAB GTPase homolog 8A[more]
AT5G03520.11.5e-5281.75RAB GTPase homolog 8C[more]
AT3G09900.11.4e-5078.74RAB GTPase homolog E1E[more]
BLAST of Carg13795 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O24466|RAE1A_ARATH2.0e-5989.84Ras-related protein RABE1a OS=Arabidopsis thaliana OX=3702 GN=RABE1A PE=1 SV=1[more]
sp|P28186|RAE1C_ARATH5.8e-5989.84Ras-related protein RABE1c OS=Arabidopsis thaliana OX=3702 GN=RABE1C PE=1 SV=1[more]
sp|Q39433|RB1BV_BETVU6.9e-5284.50Ras-related protein RAB1BV OS=Beta vulgaris OX=161934 GN=RAB1BV PE=2 SV=1[more]
sp|Q9LZD4|RAE1D_ARATH2.6e-5181.75Ras-related protein RABE1d OS=Arabidopsis thaliana OX=3702 GN=RABE1D PE=1 SV=1[more]
sp|Q9SF91|RAE1E_ARATH2.5e-4978.74Ras-related protein RABE1e OS=Arabidopsis thaliana OX=3702 GN=RABE1E PE=1 SV=1[more]
BLAST of Carg13795 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L249|A0A0A0L249_CUCSA1.1e-6299.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293850 PE=4 SV=1[more]
tr|A0A1S3BIM8|A0A1S3BIM8_CUCME3.2e-6298.44ras-related protein RABE1a OS=Cucumis melo OX=3656 GN=LOC103489977 PE=4 SV=1[more]
tr|M5W133|M5W133_PRUPE5.5e-6297.66Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G249800 PE=4 SV=1[more]
tr|G7L0L9|G7L0L9_MEDTR5.5e-6297.66RAB GTPase-like protein A5B OS=Medicago truncatula OX=3880 GN=11432353 PE=4 SV=1[more]
tr|I3T4B6|I3T4B6_MEDTR5.5e-6297.66Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001806Small_GTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg13795-RACarg13795-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 31..44
score: 51.25
coord: 67..89
score: 47.39
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..92
e-value: 9.9E-16
score: 68.3
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 1..92
e-value: 0.0017
score: -72.2
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 1..92
e-value: 4.2E-7
score: -9.8
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 1..126
e-value: 2.7E-34
score: 120.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..116
NoneNo IPR availablePANTHERPTHR24073:SF626SUBFAMILY NOT NAMEDcoord: 1..127
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..127
NoneNo IPR availablePROSITEPS51419RABcoord: 1..126
score: 19.847
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 2..90
e-value: 8.5E-30
score: 103.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..104

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg13795Cp4.1LG10g08820Cucurbita pepo (Zucchini)carcpeB1288
Carg13795MELO3C009281.2Melon (DHL92) v3.6.1carmedB0922
Carg13795Cla97C10G204110Watermelon (97103) v2carwmbB0973
Carg13795Cla97C02G046360Watermelon (97103) v2carwmbB0975
Carg13795Cla97C04G075140Watermelon (97103) v2carwmbB0977
Carg13795Bhi11G001853Wax gourdcarwgoB1070
Carg13795Bhi10G000540Wax gourdcarwgoB1072
Carg13795Bhi03G001241Wax gourdcarwgoB1076
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg13795Carg01034Silver-seed gourdcarcarB199
Carg13795Carg20277Silver-seed gourdcarcarB336
Carg13795Carg03297Silver-seed gourdcarcarB367
The following block(s) are covering this gene:
GeneOrganismBlock
Carg13795Silver-seed gourdcarcarB465
Carg13795Silver-seed gourdcarcarB644
Carg13795Cucumber (Gy14) v2carcgybB0920
Carg13795Cucumber (Gy14) v2carcgybB0921
Carg13795Cucumber (Gy14) v1carcgyB1049
Carg13795Cucurbita maxima (Rimu)carcmaB1276
Carg13795Cucurbita maxima (Rimu)carcmaB1277
Carg13795Cucurbita maxima (Rimu)carcmaB1278
Carg13795Cucurbita moschata (Rifu)carcmoB1246
Carg13795Cucurbita moschata (Rifu)carcmoB1247
Carg13795Cucurbita moschata (Rifu)carcmoB1248
Carg13795Cucurbita moschata (Rifu)carcmoB1249
Carg13795Cucurbita pepo (Zucchini)carcpeB1290
Carg13795Cucurbita pepo (Zucchini)carcpeB1292
Carg13795Wild cucumber (PI 183967)carcpiB0969
Carg13795Wild cucumber (PI 183967)carcpiB0970
Carg13795Cucumber (Chinese Long) v2carcuB0946
Carg13795Cucumber (Chinese Long) v2carcuB0947
Carg13795Cucumber (Chinese Long) v3carcucB0970
Carg13795Cucumber (Chinese Long) v3carcucB0971
Carg13795Bottle gourd (USVL1VR-Ls)carlsiB844
Carg13795Bottle gourd (USVL1VR-Ls)carlsiB849
Carg13795Melon (DHL92) v3.5.1carmeB0913
Carg13795Melon (DHL92) v3.5.1carmeB0915
Carg13795Melon (DHL92) v3.5.1carmeB0916
Carg13795Melon (DHL92) v3.6.1carmedB0920
Carg13795Melon (DHL92) v3.6.1carmedB0923
Carg13795Watermelon (Charleston Gray)carwcgB0905
Carg13795Watermelon (Charleston Gray)carwcgB0909
Carg13795Watermelon (97103) v1carwmB0933
Carg13795Watermelon (97103) v1carwmB0929
Carg13795Watermelon (97103) v2carwmbB0978