Carg13724 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTAATAAAGGCGTATTTACATGCGCAACAAGTGGAAGAGCCTTCGAATGTATTGAGATGAATGAAGAAGAAGATATGGGCGGCTTAAGAAGAGCCTTAATGGTGTGCAGAGTGATTGCAGGGATGGTCTGTGGCGGATGCATGGAGGAAGATGAACTGAACGCCAATTCCGGTTCTGGGTTCGAATCGTCGAGTGGGAAAACGGGACAGAATTCAAAACAGGAAGAACTGTTCGTGTTCAATCCTGAAGCTCTACTTCCTTGCTTCGTGGTAACTTACAGACAGTGA ATGGGCGTATTTACATGCGCAACAAGTGGAAGAGCCTTCGAATGTATTGAGATGAATGAAGAAGAAGATATGGGCGGCTTAAGAAGAGCCTTAATGGTGTGCAGAGTGATTGCAGGGATGGTCTGTGGCGGATGCATGGAGGAAGATGAACTGAACGCCAATTCCGGTTCTGGGTTCGAATCGTCGAGTGGGAAAACGGGACAGAATTCAAAACAGGAAGAACTGTTCGTGTTCAATCCTGAAGCTCTACTTCCTTGCTTCGTGGTAACTTACAGACAGTGA ATGGGCGTATTTACATGCGCAACAAGTGGAAGAGCCTTCGAATGTATTGAGATGAATGAAGAAGAAGATATGGGCGGCTTAAGAAGAGCCTTAATGGTGTGCAGAGTGATTGCAGGGATGGTCTGTGGCGGATGCATGGAGGAAGATGAACTGAACGCCAATTCCGGTTCTGGGTTCGAATCGTCGAGTGGGAAAACGGGACAGAATTCAAAACAGGAAGAACTGTTCGTGTTCAATCCTGAAGCTCTACTTCCTTGCTTCGTGGTAACTTACAGACAGTGA MGVFTCATSGRAFECIEMNEEEDMGGLRRALMVCRVIAGMVCGGCMEEDELNANSGSGFESSSGKTGQNSKQEELFVFNPEALLPCFVVTYRQ
BLAST of Carg13724 vs. NCBI nr
Match: XP_022950196.1 (uncharacterized protein LOC111453361 [Cucurbita moschata]) HSP 1 Score: 184.5 bits (467), Expect = 1.6e-43 Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0
BLAST of Carg13724 vs. NCBI nr
Match: XP_023544489.1 (uncharacterized protein LOC111804050 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 178.7 bits (452), Expect = 9.0e-42 Identity = 87/92 (94.57%), Postives = 89/92 (96.74%), Query Frame = 0
BLAST of Carg13724 vs. NCBI nr
Match: XP_022977364.1 (uncharacterized protein LOC111477713 [Cucurbita maxima]) HSP 1 Score: 175.6 bits (444), Expect = 7.6e-41 Identity = 85/92 (92.39%), Postives = 89/92 (96.74%), Query Frame = 0
BLAST of Carg13724 vs. NCBI nr
Match: XP_022142356.1 (uncharacterized protein LOC111012495 [Momordica charantia]) HSP 1 Score: 110.5 bits (275), Expect = 3.0e-21 Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = 0
BLAST of Carg13724 vs. NCBI nr
Match: XP_008439943.1 (PREDICTED: uncharacterized protein LOC103484579 [Cucumis melo] >XP_016899197.1 PREDICTED: uncharacterized protein LOC103484579 [Cucumis melo] >XP_016899198.1 PREDICTED: uncharacterized protein LOC103484579 [Cucumis melo]) HSP 1 Score: 98.2 bits (243), Expect = 1.6e-17 Identity = 53/92 (57.61%), Postives = 70/92 (76.09%), Query Frame = 0
BLAST of Carg13724 vs. TAIR10
Match: AT5G54630.1 (zinc finger protein-related) HSP 1 Score: 81.3 bits (199), Expect = 3.6e-16 Identity = 46/93 (49.46%), Postives = 62/93 (66.67%), Query Frame = 0
BLAST of Carg13724 vs. TAIR10
Match: AT2G29660.1 (zinc finger (C2H2 type) family protein) HSP 1 Score: 73.2 bits (178), Expect = 9.7e-14 Identity = 37/98 (37.76%), Postives = 59/98 (60.20%), Query Frame = 0
BLAST of Carg13724 vs. TAIR10
Match: AT4G27240.1 (zinc finger (C2H2 type) family protein) HSP 1 Score: 71.2 bits (173), Expect = 3.7e-13 Identity = 43/89 (48.31%), Postives = 57/89 (64.04%), Query Frame = 0
BLAST of Carg13724 vs. TAIR10
Match: AT1G11490.1 (zinc finger (C2H2 type) family protein) HSP 1 Score: 63.2 bits (152), Expect = 1.0e-10 Identity = 40/91 (43.96%), Postives = 59/91 (64.84%), Query Frame = 0
BLAST of Carg13724 vs. TAIR10
Match: AT1G75710.1 (C2H2-like zinc finger protein) HSP 1 Score: 58.5 bits (140), Expect = 2.5e-09 Identity = 39/108 (36.11%), Postives = 56/108 (51.85%), Query Frame = 0
BLAST of Carg13724 vs. TrEMBL
Match: tr|A0A1S3B0L1|A0A1S3B0L1_CUCME (uncharacterized protein LOC103484579 OS=Cucumis melo OX=3656 GN=LOC103484579 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.0e-17 Identity = 53/92 (57.61%), Postives = 70/92 (76.09%), Query Frame = 0
BLAST of Carg13724 vs. TrEMBL
Match: tr|A0A0A0KHY3|A0A0A0KHY3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516660 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.3e-17 Identity = 53/92 (57.61%), Postives = 68/92 (73.91%), Query Frame = 0
BLAST of Carg13724 vs. TrEMBL
Match: tr|A0A2K2CBZ7|A0A2K2CBZ7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G415600v3 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 3.1e-14 Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = 0
BLAST of Carg13724 vs. TrEMBL
Match: tr|U5GX07|U5GX07_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G415600v3 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 3.1e-14 Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = 0
BLAST of Carg13724 vs. TrEMBL
Match: tr|A0A1S2YJF6|A0A1S2YJF6_CICAR (uncharacterized protein LOC101514605 OS=Cicer arietinum OX=3827 GN=LOC101514605 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 4.0e-14 Identity = 49/89 (55.06%), Postives = 62/89 (69.66%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |