Carg13672 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13672
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Serine/arginine repetitive matrix protein 2, putative
Location	Cucurbita_argyrosperma_scaffold_058 : 39820 .. 40866 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATTCCCTTTCTGAATTCGCAATCTCAGACTCTCTCGCCGATCGCCGGCGGCAGAAGGAGTGGCAGCTTTCCCACCTCGCCGGAGTTTGAGTTCTGGATGGTCCGAAACCCCTCTTTTCCTCAGCCTAATCTTCTCTCCGCTGACGAGCTTTTTGAAGACGGCGTTCTTCTTCCTCTTCACCTTGTATCCAATCACTCTCTGTCTCTGTCGTCTGACCCTAACAAGAAATCTGACCCGGAGCCTTCTCCTTCTGAACCTGACCCCTGTGACGGCCCCAAATTGACGCCTAATTCGGTGGAATCGGGTTCTTCGTTAACGTCGTCGAAGCGATGGAGCATTTTCAAGAAGAGCGAGAAGAAGAATGTCGCGGCGAATCAGGAGGATCGAGTGAAGGAGAAGAAGAAAGAGAAGAAGAGTGGTAATGGTTCCACATCGGCGGAGTTGAATATCAATATTTGGCCGTTCTCGCGTAGTAGATCTGCTGGAAATGCTTACACTAGACCTAAAATGTTCGCCGGTACACAACCTGGATCTCGGAAGGTTAACAGTGCGCCGTGCTCTCGCAGCAACTCCACTGGTGAATCCAAATCCAGGAAGTGGCCGAGTAGTCCGAGCCGCGCTGGCGTCCATTTAGGCCGGAGCAGCCCAGTTTGGCAAGTCCGGCGCGGCGGATCCGCTGCTAAAACCTCCGAAAATTTCTCTCGCAATGCCGAAAAAGCCGCCCGGAAAGAGCCCACAGACAACAACCGAAGCAAGGCCACCGCCACCGCCACCGCCACCGCCACCGCCGCCGCTTCCAGAGTTAGAGTTTTGAATTTGAATGTTCCCATGTGTATTGGGTACAGGAACCATTTAAGCTGTAGAAGCGATGAGGCCAGTGCAGTTGGAGTTGTTGGCAATGATGGCGGTGGAAGCAGCAGCTGCAGCAGCGGCAGCCATGTTTACGGCAACAATGGAGACCTCAGCAGTGTCAGTAATCCTGGAAATTCAAACACCAATCTCTTTAGCATAAGAAGCCTTTTCACTAAAAAAGTGCATTAA

mRNA sequence

ATGGAGATTCCCTTTCTGAATTCGCAATCTCAGACTCTCTCGCCGATCGCCGGCGGCAGAAGGAGTGGCAGCTTTCCCACCTCGCCGGAGTTTGAGTTCTGGATGGTCCGAAACCCCTCTTTTCCTCAGCCTAATCTTCTCTCCGCTGACGAGCTTTTTGAAGACGGCGTTCTTCTTCCTCTTCACCTTGTATCCAATCACTCTCTGTCTCTGTCGTCTGACCCTAACAAGAAATCTGACCCGGAGCCTTCTCCTTCTGAACCTGACCCCTGTGACGGCCCCAAATTGACGCCTAATTCGGTGGAATCGGGTTCTTCGTTAACGTCGTCGAAGCGATGGAGCATTTTCAAGAAGAGCGAGAAGAAGAATGTCGCGGCGAATCAGGAGGATCGAGTGAAGGAGAAGAAGAAAGAGAAGAAGAGTGGTAATGGTTCCACATCGGCGGAGTTGAATATCAATATTTGGCCGTTCTCGCGTAGTAGATCTGCTGGAAATGCTTACACTAGACCTAAAATGTTCGCCGGTACACAACCTGGATCTCGGAAGGTTAACAGTGCGCCGTGCTCTCGCAGCAACTCCACTGGTGAATCCAAATCCAGGAAGTGGCCGAGTAGTCCGAGCCGCGCTGGCGTCCATTTAGGCCGGAGCAGCCCAGTTTGGCAAGTCCGGCGCGGCGGATCCGCTGCTAAAACCTCCGAAAATTTCTCTCGCAATGCCGAAAAAGCCGCCCGGAAAGAGCCCACAGACAACAACCGAAGCAAGGCCACCGCCACCGCCACCGCCACCGCCACCGCCGCCGCTTCCAGAGTTAGAGTTTTGAATTTGAATGTTCCCATGTGTATTGGGTACAGGAACCATTTAAGCTGTAGAAGCGATGAGGCCAGTGCAGTTGGAGTTGTTGGCAATGATGGCGGTGGAAGCAGCAGCTGCAGCAGCGGCAGCCATGTTTACGGCAACAATGGAGACCTCAGCAGTGTCAGTAATCCTGGAAATTCAAACACCAATCTCTTTAGCATAAGAAGCCTTTTCACTAAAAAAGTGCATTAA

Coding sequence (CDS)

ATGGAGATTCCCTTTCTGAATTCGCAATCTCAGACTCTCTCGCCGATCGCCGGCGGCAGAAGGAGTGGCAGCTTTCCCACCTCGCCGGAGTTTGAGTTCTGGATGGTCCGAAACCCCTCTTTTCCTCAGCCTAATCTTCTCTCCGCTGACGAGCTTTTTGAAGACGGCGTTCTTCTTCCTCTTCACCTTGTATCCAATCACTCTCTGTCTCTGTCGTCTGACCCTAACAAGAAATCTGACCCGGAGCCTTCTCCTTCTGAACCTGACCCCTGTGACGGCCCCAAATTGACGCCTAATTCGGTGGAATCGGGTTCTTCGTTAACGTCGTCGAAGCGATGGAGCATTTTCAAGAAGAGCGAGAAGAAGAATGTCGCGGCGAATCAGGAGGATCGAGTGAAGGAGAAGAAGAAAGAGAAGAAGAGTGGTAATGGTTCCACATCGGCGGAGTTGAATATCAATATTTGGCCGTTCTCGCGTAGTAGATCTGCTGGAAATGCTTACACTAGACCTAAAATGTTCGCCGGTACACAACCTGGATCTCGGAAGGTTAACAGTGCGCCGTGCTCTCGCAGCAACTCCACTGGTGAATCCAAATCCAGGAAGTGGCCGAGTAGTCCGAGCCGCGCTGGCGTCCATTTAGGCCGGAGCAGCCCAGTTTGGCAAGTCCGGCGCGGCGGATCCGCTGCTAAAACCTCCGAAAATTTCTCTCGCAATGCCGAAAAAGCCGCCCGGAAAGAGCCCACAGACAACAACCGAAGCAAGGCCACCGCCACCGCCACCGCCACCGCCACCGCCGCCGCTTCCAGAGTTAGAGTTTTGAATTTGAATGTTCCCATGTGTATTGGGTACAGGAACCATTTAAGCTGTAGAAGCGATGAGGCCAGTGCAGTTGGAGTTGTTGGCAATGATGGCGGTGGAAGCAGCAGCTGCAGCAGCGGCAGCCATGTTTACGGCAACAATGGAGACCTCAGCAGTGTCAGTAATCCTGGAAATTCAAACACCAATCTCTTTAGCATAAGAAGCCTTTTCACTAAAAAAGTGCATTAA

Protein sequence

MEIPFLNSQSQTLSPIAGGRRSGSFPTSPEFEFWMVRNPSFPQPNLLSADELFEDGVLLPLHLVSNHSLSLSSDPNKKSDPEPSPSEPDPCDGPKLTPNSVESGSSLTSSKRWSIFKKSEKKNVAANQEDRVKEKKKEKKSGNGSTSAELNINIWPFSRSRSAGNAYTRPKMFAGTQPGSRKVNSAPCSRSNSTGESKSRKWPSSPSRAGVHLGRSSPVWQVRRGGSAAKTSENFSRNAEKAARKEPTDNNRSKATATATATATAAASRVRVLNLNVPMCIGYRNHLSCRSDEASAVGVVGNDGGGSSSCSSGSHVYGNNGDLSSVSNPGNSNTNLFSIRSLFTKKVH

Homology

[Close]

BLAST of Carg13672 vs. NCBI nr
Match: XP_022949953.1 (uncharacterized protein LOC111453190 [Cucurbita moschata])

HSP 1 Score: 431.8 bits (1109), Expect = 2.2e-117
Identity = 292/348 (83.91%), Postives = 293/348 (84.20%), Query Frame = 0


Query: 1   MEIPFLNSQSQTLSPIAGGRRSGSFPTSPEFEFWMVRNPSFPQPNLLSADELFEDGVLLP 60
           MEIPFLNSQSQ LSPIAGGRRSGSFPTSPEFEFWMVRNPSFPQPNLLSADELFEDGVLLP
Sbjct: 1   MEIPFLNSQSQPLSPIAGGRRSGSFPTSPEFEFWMVRNPSFPQPNLLSADELFEDGVLLP 60

Query: 61  LHLVSNHSLSLSSDPNKKSDPXXXXXXXXPCDGPKLTPNSVESGSSLTSSKRWSIFKKSE 120
           LHLVSNHSLSLSSDPNKKSDPXXXXXXXXPCDGPKLTPNSVESGSSLTSSKRWSIFKKSE
Sbjct: 61  LHLVSNHSLSLSSDPNKKSDPXXXXXXXXPCDGPKLTPNSVESGSSLTSSKRWSIFKKSE 120

Query: 121 KKNVAANQEDRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNAYTRPKMFAGTQPGS 180
           KKNVAANQEDRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AGNAYTRPKMF+      
Sbjct: 121 KKNVAANQEDRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGNAYTRPKMFSXXXXXX 180

Query: 181 RKVNSXXXXXXXXXXXXXXRKWPSSPSRAGVHLGRSSPVWQVRRGGSAAKTSENFSRNAE 240
                XXXXXXXXXXXXXX              GRSSPVWQVRRGGSAAKTSE FSRNAE
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRSSPVWQVRRGGSAAKTSETFSRNAE 240

Query: 241 KAARKEPTDNXXXXXXXXXXXXXXXXXXXXXXXXXXXPMCIGYRNHLSCRSDEASAVGVV 300
           KAARKEPTDN                           PMCIGYRNHLSCRSDEASAVGVV
Sbjct: 241 KAARKEPTDN--------NRSKATAAASRVRVLNLNVPMCIGYRNHLSCRSDEASAVGVV 300

Query: 301 GNDGGGSSSCSSGSHVYGNNGDLSSVSNPGNSNTNLFSIRSLFTKKVH 349
           GNDGGGSSSCSSGSHVYGNNGDLSSVSNPGNSNTNLFSIRSLFTKKVH
Sbjct: 301 GNDGGGSSSCSSGSHVYGNNGDLSSVSNPGNSNTNLFSIRSLFTKKVH 340

[Close]

BLAST of Carg13672 vs. NCBI nr
Match: XP_023544356.1 (protein lingerer [Cucurbita pepo subsp. pepo])

HSP 1 Score: 419.1 bits (1076), Expect = 1.5e-113
Identity = 310/350 (88.57%), Postives = 312/350 (89.14%), Query Frame = 0


Query: 1   MEIPFLNSQSQTLSPIAGGRRSGSFPTSPEFEFWMVRNPSFPQPNLLSADELFEDGVLLP 60
           MEIPFLNSQSQ LSPIAGGRRSGSFPTSPEFEFWMVRNPSFPQPNLLSADELFEDGVLLP
Sbjct: 1   MEIPFLNSQSQPLSPIAGGRRSGSFPTSPEFEFWMVRNPSFPQPNLLSADELFEDGVLLP 60

Query: 61  LHLVSN--HSLSLSSDPNKKSDPXXXXXXXXPCDGPKLTPNSVESGSSLTSSKRWSIFKK 120
           LHLVS+                 XXXXXXXX CDGPKLTPNSVESGSSLTSSKRWSIFKK
Sbjct: 61  LHLVSSXXXXXXXXXXXXXXXXXXXXXXXXXXCDGPKLTPNSVESGSSLTSSKRWSIFKK 120

Query: 121 SEKKNVAANQEDRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNAYTRPKMFAGTQP 180
           SEKKNVAANQEDRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNAYTRPKMFAGTQP
Sbjct: 121 SEKKNVAANQEDRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNAYTRPKMFAGTQP 180

Query: 181 GSRKVNSXXXXXXXXXXXXXXRKWPSSPSRAGVHLGRSSPVWQVRRGGSAAKTSENFSRN 240
           GSRKVN XXXXXXXXXXXXXXRKWPSSPSRAGVHLGRSSPVWQVRRGGSAAKTSE FSRN
Sbjct: 181 GSRKVNXXXXXXXXXXXXXXXRKWPSSPSRAGVHLGRSSPVWQVRRGGSAAKTSETFSRN 240

Query: 241 AEKAARKEPTDNXXXXXXXXXXXXXXXXXXXXXXXXXXXPMCIGYRNHLSCRSDEASAVG 300
           AEKAARKEPTDN       XXXXXXXXXXXXXXXXXXXXPMCIGYRNHLSCRSDEASAVG
Sbjct: 241 AEKAARKEPTDN------NXXXXXXXXXXXXXXXXXXXXPMCIGYRNHLSCRSDEASAVG 300

Query: 301 VVGNDGGGSSSCSSGSHVYGNNGDLSSVSNPGNSNTNLFSIRSLFTKKVH 349
           V+GND G         HVYGNNGDLSSVSNPGNSNTNLFSIRSLFTKKVH
Sbjct: 301 VIGND-GXXXXXXXXXHVYGNNGDLSSVSNPGNSNTNLFSIRSLFTKKVH 343

[Close]

BLAST of Carg13672 vs. NCBI nr
Match: XP_022978897.1 (uncharacterized protein LOC111478712 [Cucurbita maxima])

HSP 1 Score: 365.5 bits (937), Expect = 1.9e-97
Identity = 264/348 (75.86%), Postives = 265/348 (76.15%), Query Frame = 0


Query: 1   MEIPFLNSQSQTLSPIAGGRRSGSFPTSPEFEFWMVRNPSFPQPNLLSADELFEDGVLLP 60
           MEIPFLNSQ+Q LSPI GGRRSGSFPTSPEFEFWMVRNPSFPQPNLLSADELFEDGVLLP
Sbjct: 1   MEIPFLNSQTQPLSPITGGRRSGSFPTSPEFEFWMVRNPSFPQPNLLSADELFEDGVLLP 60

Query: 61  LHLVSNHSLSLSSDPNKKSDPXXXXXXXXPCDGPKLTPNSVESGSSLTSSKRWSIFKKSE 120
           LHLVSNHS SLSSDPNKKSDP        PCDGPKLTPNSVESGSSLTSSKRWSIFKK E
Sbjct: 61  LHLVSNHSPSLSSDPNKKSDPEPPPPELDPCDGPKLTPNSVESGSSLTSSKRWSIFKKCE 120

Query: 121 KKNVAANQEDRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNAYTRPKMFAGTQPGS 180
           KKN AANQEDRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNAYTRPKMF GTQPGS
Sbjct: 121 KKNAAANQEDRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNAYTRPKMFPGTQPGS 180

Query: 181 RKVNSXXXXXXXXXXXXXXRKWPSSPSRAGVHLGRSSPVWQVRRGGSAAKTSENFSRNAE 240
           RKVNS              RKWPSSPSRAGVHLGRSSPVWQVRRGGSAAKTSE FSRNAE
Sbjct: 181 RKVNSAPCSRSNSTGESKSRKWPSSPSRAGVHLGRSSPVWQVRRGGSAAKTSETFSRNAE 240

Query: 241 KAARKEPTDNXXXXXXXXXXXXXXXXXXXXXXXXXXXPMCIGYRNHLSCRSDEASAVGVV 300
           K ARKEPTDN       XXXXXXXXXXXXXXXXXXXX   IGYRNHLSCRSD        
Sbjct: 241 KTARKEPTDN------NXXXXXXXXXXXXXXXXXXXXXXXIGYRNHLSCRSD----XXXX 300

Query: 301 GNDGGGSSSCSSGSHVYGNNGDLSSVSNPGNSNTNLFSIRSLFTKKVH 349
                                              LFSIRSLFTKKVH
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSIRSLFTKKVH 338

[Close]

BLAST of Carg13672 vs. NCBI nr
Match: XP_023517334.1 (uncharacterized protein LOC111781122 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293.5 bits (750), Expect = 9.4e-76
Identity = 216/332 (65.06%), Postives = 227/332 (68.37%), Query Frame = 0


Query: 22  SGSFPTSPEFEFWMVRNPSFPQPNLLSADELFEDGVLLPLHLVSNHSLSLSSDPNKKSDP 81
           +GSFPTSPEFEFWMVRNPS PQPNLLSADELF DGVLLPLHLVSNH  S S++PN K+DP
Sbjct: 7   TGSFPTSPEFEFWMVRNPSCPQPNLLSADELFVDGVLLPLHLVSNHCTSQSTEPNPKTDP 66

Query: 82  XXXXXXXXPCDGPKLTPNSVESGSSLTSSKRWSIFKKSEKKNVAANQEDRVXXXXXXXXX 141
                   PCDGPKL   S E+GSSLTSS+RW+IFKKSEKKN +  QED  XXXXXXXXX
Sbjct: 67  EPPPSEPDPCDGPKLMRVSAETGSSLTSSQRWNIFKKSEKKNASGCQEDXXXXXXXXXXX 126

Query: 142 XXXXXXXXXXXXXXXXXXXXXAGNAYTRPKMFAGTQPGSRKVNSXXXXXXXXXXXXXXRK 201
           XXXXXXXXXXXXXXXXXXXXXAGN +TRPK+F G QPGSRK NS   XXXXXXXXXXX K
Sbjct: 127 XXXXXXXXXXXXXXXXXXXXXAGNTFTRPKIFTGGQPGSRKFNSAPCXXXXXXXXXXXXK 186

Query: 202 WPSSPSRAGVHLGRSSPVWQVRRGGSAAKTSENFSRNAEKAARKEPTDNXXXXXXXXXXX 261
           WPSSPS AGVHLGRSSPVWQVRRGGSA KTSE  SRNAEK ARKEPTD            
Sbjct: 187 WPSSPSHAGVHLGRSSPVWQVRRGGSAVKTSETLSRNAEKTARKEPTD---------AHR 246

Query: 262 XXXXXXXXXXXXXXXXPMCIGYRNHLSCRSDEASAVGVVG-----NDGGGSSSCSSGSHV 321
                           PMCIGYRNHLSCRSDE S +G VG                    
Sbjct: 247 SKAAAASRVRVLNLNVPMCIGYRNHLSCRSDETSGLGAVGXXXXXXXXXXXXXXXXXXXX 306

Query: 322 YGNNGDLSSVSNPGNSNTNLFSIRSLFTKKVH 349
                             NLFSIRSLFTKKVH
Sbjct: 307 XXXXXXXXXXXXXXXXXXNLFSIRSLFTKKVH 329

[Close]

BLAST of Carg13672 vs. NCBI nr
Match: XP_022926337.1 (uncharacterized protein LOC111433517 [Cucurbita moschata])

HSP 1 Score: 283.1 bits (723), Expect = 1.3e-72
Identity = 211/332 (63.55%), Postives = 222/332 (66.87%), Query Frame = 0


Query: 22  SGSFPTSPEFEFWMVRNPSFPQPNLLSADELFEDGVLLPLHLVSNHSLSLSSDPNKKSDP 81
           +GSFPTSPEFEFWMVRNPS PQPNLLSADELF DGVLLPLHLVSNH  S S++PN K+DP
Sbjct: 7   TGSFPTSPEFEFWMVRNPSCPQPNLLSADELFVDGVLLPLHLVSNHCTSQSNEPNPKTDP 66

Query: 82  XXXXXXXXPCDGPKLTPNSVESGSSLTSSKRWSIFKKSEKKNVAANQEDRVXXXXXXXXX 141
                   PCDGPKL   S E+GSSLTSS+RW+IFKKSEKKN +  QED  XXXXXXXXX
Sbjct: 67  EPPPSEPDPCDGPKLMRVSAETGSSLTSSQRWNIFKKSEKKNASGCQEDXXXXXXXXXXX 126

Query: 142 XXXXXXXXXXXXXXXXXXXXXAGNAYTRPKMFAGTQPGSRKVNSXXXXXXXXXXXXXXRK 201
           XXXXXXXXXXXXXXXXXXXXXAGN +TRPK+F G QPGSRK NS   XXXXXXXXXXX K
Sbjct: 127 XXXXXXXXXXXXXXXXXXXXXAGNTFTRPKIFTGGQPGSRKFNSAPCXXXXXXXXXXXXK 186

Query: 202 WPSSPSRAGVHLGRSSPVWQVRRGGSAAKTSENFSRNAEKAARKEPTDNXXXXXXXXXXX 261
           WPSSPS  GVHLGRSSPVWQVRRGGS  KTSE  SRNAEK ARKEPTD            
Sbjct: 187 WPSSPSHTGVHLGRSSPVWQVRRGGSTVKTSETLSRNAEKTARKEPTD---------AHR 246

Query: 262 XXXXXXXXXXXXXXXXPMCIGYRNHLSCRSDEASAVGV-----VGNDGGGSSSCSSGSHV 321
                           PMCIGYRNHLSCRSDE S +G                       
Sbjct: 247 SKAAAASGVRVLNLNVPMCIGYRNHLSCRSDETSGLGAXXXXXXXXXXXXXXXXXXXXXX 306

Query: 322 YGNNGDLSSVSNPGNSNTNLFSIRSLFTKKVH 349
                              LFSIRSLFTKKVH
Sbjct: 307 XXXXXXXXXXXXXXXXXXXLFSIRSLFTKKVH 329

[Close]

BLAST of Carg13672 vs. TAIR10
Match: AT4G22190.1 (unknown protein)

HSP 1 Score: 108.2 bits (269), Expect = 1.0e-23
Identity = 147/301 (48.84%), Postives = 167/301 (55.48%), Query Frame = 0


Query: 11  QTLSPIAGGRRSGSFPTS-PEFEFWMVRNPSFPQ--PNLLSADELFEDGVLLPLHLVSNH 70
           +TLSP    RR  S  ++ PEFEFW + N SFPQ   +LLSADELF DGVLLPL L+S  
Sbjct: 62  ETLSPCGSQRRRSSCDSNPPEFEFWRLTNSSFPQADSDLLSADELFHDGVLLPLDLLSVK 121

Query: 71  SLSLSSDPN-KKSDPXXXXXXXXPCDGPKLTPNSVE----SGSSLTS----SKRW-SIFK 130
           S  L SDPN  + DP        P  G  +T    +     GS LT     SKRW  IF+
Sbjct: 122 S-ELQSDPNIAECDP-----DPSPSTGSLITEQKSDLEPGLGSELTRETTVSKRWRDIFR 181

Query: 131 KSEK----KNVAANQEDRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNAYTRPKMF 190
           KSE     K          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGN  TRP+M 
Sbjct: 182 KSETKPPGKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNNVTRPRMS 241

Query: 191 AGTQPGSRKVNSXXXXXXXXXXXXXXRKWPSSPSRAGVHLGRSSPVWQVRRGGSAAKTSE 250
            G  P +R    XXXXXXXXXXXXXX      PSR GVHLGR+SPVWQVRRGG A     
Sbjct: 242 FGA-PTTRXXXXXXXXXXXXXXXXXXXXXXXXPSRNGVHLGRNSPVWQVRRGGGAPVGKT 301

Query: 251 NFSRNAEKAARKEPTDNXXXXXXXXXXXXXXXXXXXXXXXXXXXPMCIGYRNHLSCRSDE 295
                     ++E  +                            PMCIGYR+ LSCR++E
Sbjct: 302 IPEPMGRVVGKREIPET--------RKGKTVIESNKAKVLNLNVPMCIGYRSRLSCRTEE 347

[Close]

BLAST of Carg13672 vs. TrEMBL
Match: tr|A0A1S3B081|A0A1S3B081_CUCME (dermokine OS=Cucumis melo OX=3656 GN=LOC103484641 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 6.3e-52
Identity = 204/316 (64.56%), Postives = 213/316 (67.41%), Query Frame = 0


Query: 35  MVRNPSFPQPNLLSADELFEDGVLLPLHLVSNHSLSLSSDPNKKSDPXXXXXXXXPCDGP 94
           MVRNPSFPQ NLLSADELF DGVLLPLHL+ NHS             XXXXXXXX    P
Sbjct: 1   MVRNPSFPQTNLLSADELFVDGVLLPLHLLPNHSSXXXXXXXXXXXXXXXXXXXXXXXXP 60

Query: 95  KLTPNSVESGSSLTSSKRWSIFKKSEKKNVAANQEDRVXXXXXXXXXXXXXXXXXXXXXX 154
           KLTPNS +SGS   SSKRWSIFKK              XXXXXXXXXXXXXXXXXX    
Sbjct: 61  KLTPNSADSGS---SSKRWSIFKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNINI 120

Query: 155 XXXXXXXXAGNAYTRPKMFAGTQPGSRKVNSXXXXXXXXXXXXXXRKWPSSPSRAGVHLG 214
                   AGNA+TRPK+F G QPGSR    XXXXXXXXXXXXXX KWPSSPSR GVHLG
Sbjct: 121 WPFSRSRSAGNAFTRPKLFPGAQPGSRXXXXXXXXXXXXXXXXXXXKWPSSPSRGGVHLG 180

Query: 215 RSSPVWQVRRGGSAAKTSENFSRNAEKAARKEPTDNXXXXXXXXXXXXXXXXXXXXXXXX 274
           RSSPVWQVRRGGSA KTSE FSRNA+K ARKEPT+       XXXXXXXXXXXXXXXXXX
Sbjct: 181 RSSPVWQVRRGGSAPKTSETFSRNADKPARKEPTE---VHRSXXXXXXXXXXXXXXXXXX 240

Query: 275 XXXPMCIGYRNHLSCRSDEASAVGVVGN--DGGGSSSCSSGSHVYGNNGDLSSVSNPGNS 334
           XXXPMCIGYRNHLSCRSDE SA+GV+G+                                
Sbjct: 241 XXXPMCIGYRNHLSCRSDETSALGVIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 335 NTNLFSIRSLFTKKVH 349
             NLFSIRSLFTKKVH
Sbjct: 301 TANLFSIRSLFTKKVH 310

[Close]

BLAST of Carg13672 vs. TrEMBL
Match: tr|A0A067GI84|A0A067GI84_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g047711mg PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 5.1e-46
Identity = 151/316 (47.78%), Postives = 176/316 (55.70%), Query Frame = 0


Query: 1   MEIPFLNS-QSQTLSPI-AGGRRSGSFPTSPEFEFWMVRNPSFPQPNLLSADELFEDGVL 60
           M+ P  N+ + + LSP  +G RR+G    SPEFEFWMVRNPSFPQPNLLSADELF DGVL
Sbjct: 1   MDSPNSNTHEIRGLSPCNSGRRRNGRDTNSPEFEFWMVRNPSFPQPNLLSADELFVDGVL 60

Query: 61  LPLHLVSNHSLSLSSDPNKKSDPXXXXXXXXPCD-----GPKLTPNSVESGSSLTSSKRW 120
           LPLHL+ N     SSDPN   DP          +     GP+L   + E  + LTSSKRW
Sbjct: 61  LPLHLLPNK----SSDPNAHPDPGPLDKEPGEEEEEAEAGPELRHVTAELTNGLTSSKRW 120

Query: 121 -SIFKKSEKKNVAANQEDRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNAYTRPKM 180
             IFK+S+KKNV   +                                  AGN+  RP+M
Sbjct: 121 KDIFKRSDKKNVINTKNVEDKEKRREKKCQGGASSAELNINIWPFSRSRSAGNSVARPRM 180

Query: 181 FAGTQPGSRKVNSXXXXXXXXXXXXXXRKWPSSPSRAGVHLGRSSPVWQVRRG------- 240
            +G  P +RK   XXXXXXXXXX    RKWPSSP RAGVHLGRSSP+WQV+RG       
Sbjct: 181 VSGA-PATRKXXXXXXXXXXXXXESKSRKWPSSPGRAGVHLGRSSPIWQVKRGAGGGSGS 240

Query: 241 GSAAKTSENFSRNAEKAARKEPTDNXXXXXXXXXXXXXXXXXXXXXXXXXXXPMCIGYRN 300
           G A  +SE   R+ EK   K+  D           XXXXXXX          PMCIGYR+
Sbjct: 241 GLAKSSSEPGVRSGEKVGNKK--DARSKLLGNNGSXXXXXXXGRVLNLNVNVPMCIGYRH 300

Query: 301 HLSCRSDEASAVGVVG 302
           HLSCRSDE SA+G VG
Sbjct: 301 HLSCRSDENSAIGRVG 309

[Close]

BLAST of Carg13672 vs. TrEMBL
Match: tr|F6HRE7|F6HRE7_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_10s0116g00350 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 6.7e-46
Identity = 177/352 (50.28%), Postives = 201/352 (57.10%), Query Frame = 0


Query: 1   MEIPFLNSQSQTLSPIAGGRRSGSFPTSPEFEFWMVRNPSFPQPNLLSADELFEDGVLLP 60
           ME P    + QTLSP + GRRS S   SPEFEFWMVRNPSFPQPNLLSADELF DGVLLP
Sbjct: 1   MESPRFKLEPQTLSPSSSGRRS-SDSNSPEFEFWMVRNPSFPQPNLLSADELFVDGVLLP 60

Query: 61  LHLVSNHSLSLSSDPNKKSD-PXXXXXXXXPCDGPKLTPNSVESGSSLTSSKRW-SIFKK 120
           LHL+ ++  S        S+ P      XX             +  + T+SKRW  IFKK
Sbjct: 61  LHLLRHNPDSSKPVQELNSEAPDSEPPIXXXXXXXXXXXXXXSAAPASTASKRWKDIFKK 120

Query: 121 SEKKNVAANQE--DRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNAYTRPKMFAGT 180
            EKK+ A N E     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GN   RP+M AG 
Sbjct: 121 GEKKS-AKNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNAVRPRMAAG- 180

Query: 181 QPGSRKVNSXXXXXXXXXXXXXXRKWPSSPSRAGVHLGRSSPVWQVRRGGSAAKTSENFS 240
             G+RKV+S              RKWPSSP R GVHLGRSSPVWQVRRGGSA+K+ E   
Sbjct: 181 GAGTRKVSSAPCSRSNSAGESKSRKWPSSPGRPGVHLGRSSPVWQVRRGGSASKSLEPLV 240

Query: 241 RNAEKAARKEPTDNXXXXXXXXXXXXXXXXXXXXXXXXXXXPMCIGYRNHLSCRSDEASA 300
           RNAEK ++KE ++N                           PMCIGYR+HLSCRSDE S 
Sbjct: 241 RNAEKGSKKEGSEN---RRNRTPAPAPPAGIPKARVLNLNVPMCIGYRHHLSCRSDENST 300

Query: 301 VGVVGNDGGGSSSCSSGSHVYGNNGDLSSVSNPGNSNTNLFSIRSLFTKKVH 349
           +G     G      S G                      LF++RSLFTKKV+
Sbjct: 301 IGTSHTIG------SRGXXXXXXXXXXXXXXXXXXXXXXLFNLRSLFTKKVY 340

[Close]

BLAST of Carg13672 vs. TrEMBL
Match: tr|V4UFT0|V4UFT0_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10015792mg PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 2.2e-44
Identity = 155/318 (48.74%), Postives = 179/318 (56.29%), Query Frame = 0


Query: 1   MEIPFLNS-QSQTLSPI-AGGRRSGSFPTSPEFEFWMVRNPSFPQPNLLSADELFEDGVL 60
           M+ P  N+ + + LSP  +G RR+G    SPEFEFWMVRNPSFPQPNLLSADELF DGVL
Sbjct: 1   MDSPNSNTHEIRGLSPCNSGRRRNGRDTNSPEFEFWMVRNPSFPQPNLLSADELFVDGVL 60

Query: 61  LPLHLVSNHSLSLSSDPNKKSDP-------XXXXXXXXPCDGPKLTPNSVESGSSLTSSK 120
           LPLHL+ N     SSDPN   DP       XXXXXXXX   GP+L   + E  + LTSSK
Sbjct: 61  LPLHLLPNK----SSDPNAHPDPGPLDXXXXXXXXXXXXXXGPELRHVTAELTNGLTSSK 120

Query: 121 RW-SIFKKSEKKNVAANQEDRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNAYTRP 180
           RW  IFK+S+KKNV   +                                  AGN+  RP
Sbjct: 121 RWKDIFKRSDKKNVINTKNVEDKEKRREKKCQGGASSAELNINIWPFSRSRSAGNSGARP 180

Query: 181 KMFAGTQPGSRKVNSXXXXXXXXXXXXXXRKWPSSPSRAGVHLGRSSPVWQVRRG----- 240
           +M +G  P +RK   XXXXXXXXXX    RKWPSSP RAGVHLGRS P+WQV+RG     
Sbjct: 181 RMVSGA-PATRKXXXXXXXXXXXXXESKSRKWPSSPGRAGVHLGRSGPIWQVKRGAGGGS 240

Query: 241 --GSAAKTSENFSRNAEKAARKEPTDNXXXXXXXXXXXXXXXXXXXXXXXXXXXPMCIGY 300
             G A  +SE   R+ EK   K+  D            XXXXX           P CIGY
Sbjct: 241 GSGLAKSSSEPGVRSGEKVGNKK--DARSKLLGNNGSSXXXXXKGRVLNLNVNVPKCIGY 300

Query: 301 RNHLSCRSDEASAVGVVG 302
           R+HLSCRSDE SA+G VG
Sbjct: 301 RHHLSCRSDENSAIGGVG 311

[Close]

BLAST of Carg13672 vs. TrEMBL
Match: tr|A0A2N9FB23|A0A2N9FB23_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12092 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 7.0e-43
Identity = 177/358 (49.44%), Postives = 200/358 (55.87%), Query Frame = 0


Query: 1   MEIPFLN-SQSQTLSPIAGGRRS-GSFPTSPEFEFWMVRNPSFPQPNLLSADELFEDGVL 60
           ME P L+    Q LSP + GRRS  S   SPEFEFWMVRNPSFPQPNL+SADELF DGV+
Sbjct: 1   MESPTLSLGAVQILSPSSSGRRSRSSCSASPEFEFWMVRNPSFPQPNLVSADELFVDGVI 60

Query: 61  LPLHLVSNHSLSLSSDPNKKSDPXXXXXXXXPCDGPKLTPNSVESGSSLTSSKRW-SIFK 120
           LPL L+S+H+ +           XXXXXXXX             +G   T SKRW  IFK
Sbjct: 61  LPLQLLSHHNQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAG--FTGSKRWRDIFK 120

Query: 121 KSEKKN-------VAANQEDRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNAYTRP 180
           KS+KKN                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GN  TRP
Sbjct: 121 KSDKKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNTGTRP 180

Query: 181 KMFAGTQPGSRKVNSXXXXXXXXXXXXXXRKWPSSPSRAGVHLGRSSPVWQVRRGGSAAK 240
           K+  G  PG+RKVNS              RKWPSSP R GVHLGRSSPVWQ RRGGS  K
Sbjct: 181 KLTPGA-PGTRKVNSAPCSRSNSAGESKSRKWPSSPGRPGVHLGRSSPVWQARRGGSGFK 240

Query: 241 TSENFSRNAEKAARKEPTDNXXXXXXXXXXXXXXXXXXXXXXXXXXXPMCIGYRNHLSCR 300
           +SE   R +EK  +K+ +D                            PMCIGYR+HLSC+
Sbjct: 241 SSEPVVRGSEKINKKDVSDT-------RRARTVPGSGPKAKVLNLNVPMCIGYRHHLSCK 300

Query: 301 SDEASAVGVVGNDGGGSSSCSSGSHVYGNNGDLSSVSNPGNSNTNLFSIRSLFTKKVH 349
           SDE SA+G  G                 N G             NLF++RSLFTKKV+
Sbjct: 301 SDEHSALGGSGXXXXXXXXXXXXXXXXSNGG-------------NLFNLRSLFTKKVY 335

The following BLAST results are available for this feature:

BLAST of Carg13672 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949953.1	2.2e-117	83.91	uncharacterized protein LOC111453190 [Cucurbita moschata]	[more]
XP_023544356.1	1.5e-113	88.57	protein lingerer [Cucurbita pepo subsp. pepo]	[more]
XP_022978897.1	1.9e-97	75.86	uncharacterized protein LOC111478712 [Cucurbita maxima]	[more]
XP_023517334.1	9.4e-76	65.06	uncharacterized protein LOC111781122 [Cucurbita pepo subsp. pepo]	[more]
XP_022926337.1	1.3e-72	63.55	uncharacterized protein LOC111433517 [Cucurbita moschata]	[more]

BLAST of Carg13672 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G22190.1	1.0e-23	48.84	unknown protein	[more]

BLAST of Carg13672 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg13672 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B081\|A0A1S3B081_CUCME	6.3e-52	64.56	dermokine OS=Cucumis melo OX=3656 GN=LOC103484641 PE=4 SV=1	[more]
tr\|A0A067GI84\|A0A067GI84_CITSI	5.1e-46	47.78	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g047711mg PE=4 SV=1	[more]
tr\|F6HRE7\|F6HRE7_VITVI	6.7e-46	50.28	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_10s0116g00350 PE=4 SV=...	[more]
tr\|V4UFT0\|V4UFT0_9ROSI	2.2e-44	48.74	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10015792mg PE=4 ...	[more]
tr\|A0A2N9FB23\|A0A2N9FB23_FAGSY	7.0e-43	49.44	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12092 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13672-RA	Carg13672-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 118..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..260
None	No IPR available	PANTHER	PTHR35132:SF1	SUBFAMILY NOT NAMED	coord: 10..348
None	No IPR available	PANTHER	PTHR35132	FAMILY NOT NAMED	coord: 10..348

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg13672	Cla014419	Watermelon (97103) v1	carwmB0931
Carg13672	Csa6G512910	Cucumber (Chinese Long) v2	carcuB0948
Carg13672	MELO3C007420	Melon (DHL92) v3.5.1	carmeB0918
Carg13672	ClCG01G021640	Watermelon (Charleston Gray)	carwcgB0906
Carg13672	CSPI06G33220	Wild cucumber (PI 183967)	carcpiB0971
Carg13672	Cucsa.044930	Cucumber (Gy14) v1	carcgyB1047
Carg13672	CmaCh07G003300	Cucurbita maxima (Rimu)	carcmaB1279
Carg13672	CmaCh03G005560	Cucurbita maxima (Rimu)	carcmaB1276
Carg13672	CmoCh07G003210	Cucurbita moschata (Rifu)	carcmoB1250
Carg13672	Lsi01G004600	Bottle gourd (USVL1VR-Ls)	carlsiB846
Carg13672	Cp4.1LG10g09850	Cucurbita pepo (Zucchini)	carcpeB1288
Carg13672	Cp4.1LG19g08120	Cucurbita pepo (Zucchini)	carcpeB1289
Carg13672	CsGy6G032800	Cucumber (Gy14) v2	carcgybB0922
Carg13672	MELO3C007420.2	Melon (DHL92) v3.6.1	carmedB0925
Carg13672	CsaV3_6G048690	Cucumber (Chinese Long) v3	carcucB0972
Carg13672	Cla97C01G021240	Watermelon (97103) v2	carwmbB0972
Carg13672	Bhi03G000477	Wax gourd	carwgoB1075

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg13672	Carg07860	Silver-seed gourd	carcarB563

The following block(s) are covering this gene:


Gene	Organism	Block
Carg13672	Cucurbita moschata (Rifu)	carcmoB1246