Carg13590 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13590
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Early nodulin-like protein
Location	Cucurbita_argyrosperma_scaffold_053 : 392907 .. 394916 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCTCCAACCCTTGCTGGGTTCCTCGCCCTCGCCCTCGCTTTACTTGCTGCCATGGTTTCCTCTTCTGATGCCTACAAATTCTACGTCGGCGGCGGAGATGGCTGGGTTCAAAACCCTTCTGAGAACTTTAATCACTGGGCTGAGCGCAACCGGTTCCAAGTCAATGATACTCTTTGTAAGAATCTTTTCATACCATTATATCTTTATCTTGCTAAGATGGGTTTAAAAGGTAGGGAATTTAAAGGTAGGGAATTTAAAGGTAGGGAATGGTCGTGAATTTATGAGTAAGGAATAGATCAATAAAGTTATGAGAGGTTATCCTCAAATTTCGTCATTTGGGTTTGTTTTATTTTATCCAGCGGTGGTCCTTGCCCGAATTAAAATCATGAGAGCTTATGCTCAAGTTTTGTCATCTGGGTTTGTTTTTATTTCATCAGTGGAGATGCTGATCGGTGTCAAAAGGATTAACCGCTCATGGTCCTTGCTTGAAATAAAGCCATGAGAGGTTATGCTCAAATTTTGTCATTTGGGTATGTTTTATTTTATCGAGCGGTGGTCCTTGCCCGAACTAAAATCATGAGAGCTTATGCTCAAGTTTTGTCATATGGGTCTGTTTTTATTTCATCCGTGGAGATGCTGATCGGTGTCAAAAGGACTAACTGCTCATGGTCCTTGCCTAATATAAAGTCATGAGAGGTTATGCTCAAATTTTGTCATTTGGGTATGTTTTATTTTATCAAGTGGTAGTTTAACTAAAAACCATGAGAGCTTGCTCATTTTGTCATCTGGGTCTGTTTTTATTTCATCAGTGGAGATGCTGATCGGTGTCAAAAGGACTAACTGCTCATGGTCCTTGCCTGATATAAAGTCATGAGAGGTTATGCTCAAATTTTGTCATTTGGGTATGTTTTATTTTATCAAGTGGTAGTCCTTGCCCGAACTAAAACCATGAGAGCTTATGCTCAAGTTTTGTCATCTGGGTCTGTTTTTATTTCATCAGTGGAGATGCTGATCGGTGTCAAAAGGACTAACTGCTCATGGTCCTTGCCTGATATAAAGTCATGAGAGGTTATGCTCAAATTTTGTCATTTGGATATGTTTTATTTTATCGAGTGGTAGTCCTTGCCCGAACTAAAACCATGAGAGCTTATGCTCAATTTTTGTCATCTGGGTCTGTTTTTATTTCATCAGTGAAGATGCTGATCGGTGTCAAAAGGACTAACCCCTCATGGTCTTGCTTGAAATAAAGTCATGAGAGCTTATTCTCAAATTTTGTCATTTGGGTCTATTTGTTTTTATTTCATCAATGGAGATGCTGATGGGTGCCCTAAGGGCCAACGACTCATTGTTGTGGTCCTTGTCCGAAATAAAGTCATGAGAGCTTATGCTCAAATTTTATCAGTTGGGTCTGTTTTATTTTATCAGTGGAGATGCGGATCGGTGCCAGAAGAGCCAACCGCTCATTGTTGTGGTTCTTGGTGTGAGGCATAAATAGCACCGAGTTCATGATTAAAGGGGACAATATCATATTAAAGGGGGCAATATCATATTATCGTGGAGATTCGTGATTTCTAACCTAAATTCTTTTTTGGGACAGATTTCAAGTATAAAAATGGGACGGATTCTGTGTTGGTTGTAAGCAAGGAAGATTATTTCTCTTGCAATACCAAAAACCCAGTAATTACCCTAAAAGATGGTGAATCAATCTTCAAATTTGGTCATTCGGGTCCGTTTTATTTCATAAGTGGAGACGCTGATCGGTGCCAGAAGGGTCAACGGCTCATTGTAGTGGTTCTTGCTTTGAGGCATAAACAGCATCTTGCTCCGTCGCCACAAGCTCCGACCCCGACTGCTCAGTCACCGGAAAACGCTGGTTCGCCGGAATCCGGCGTTGGATTCACAGCGCCGGTTCCAGCTCCGGCGAAGAGTTCTGCTTTTGGAGGGTCTGTTAGTACGTTGAGTTTGGGTGTTGTTTTAGTCAGTTTTTTTGTGGGTTTTGTTTGA

mRNA sequence

ATGGCGCCTCCAACCCTTGCTGGGTTCCTCGCCCTCGCCCTCGCTTTACTTGCTGCCATGGTTTCCTCTTCTGATGCCTACAAATTCTACGTCGGCGGCGGAGATGGCTGGGTTCAAAACCCTTCTGAGAACTTTAATCACTGGGCTGAGCGCAACCGGTTCCAAGTCAATGATACTCTTTTAATTACCCTAAAAGATGGTGAATCAATCTTCAAATTTGGTCATTCGGGTCCGTTTTATTTCATAAGTGGAGACGCTGATCGGTGCCAGAAGGGTCAACGGCTCATTGTAGTGGTTCTTGCTTTGAGGCATAAACAGCATCTTGCTCCGTCGCCACAAGCTCCGACCCCGACTGCTCAGTCACCGGAAAACGCTGGTTCGCCGGAATCCGGCGTTGGATTCACAGCGCCGGTTCCAGCTCCGGCGAAGAGTTCTGCTTTTGGAGGGTCTGTTAGTACGTTGAGTTTGGGTGTTGTTTTAGTCAGTTTTTTTGTGGGTTTTGTTTGA

Coding sequence (CDS)

ATGGCGCCTCCAACCCTTGCTGGGTTCCTCGCCCTCGCCCTCGCTTTACTTGCTGCCATGGTTTCCTCTTCTGATGCCTACAAATTCTACGTCGGCGGCGGAGATGGCTGGGTTCAAAACCCTTCTGAGAACTTTAATCACTGGGCTGAGCGCAACCGGTTCCAAGTCAATGATACTCTTTTAATTACCCTAAAAGATGGTGAATCAATCTTCAAATTTGGTCATTCGGGTCCGTTTTATTTCATAAGTGGAGACGCTGATCGGTGCCAGAAGGGTCAACGGCTCATTGTAGTGGTTCTTGCTTTGAGGCATAAACAGCATCTTGCTCCGTCGCCACAAGCTCCGACCCCGACTGCTCAGTCACCGGAAAACGCTGGTTCGCCGGAATCCGGCGTTGGATTCACAGCGCCGGTTCCAGCTCCGGCGAAGAGTTCTGCTTTTGGAGGGTCTGTTAGTACGTTGAGTTTGGGTGTTGTTTTAGTCAGTTTTTTTGTGGGTTTTGTTTGA

Protein sequence

MAPPTLAGFLALALALLAAMVSSSDAYKFYVGGGDGWVQNPSENFNHWAERNRFQVNDTLLITLKDGESIFKFGHSGPFYFISGDADRCQKGQRLIVVVLALRHKQHLAPSPQAPTPTAQSPENAGSPESGVGFTAPVPAPAKSSAFGGSVSTLSLGVVLVSFFVGFV

Homology

[Close]

BLAST of Carg13590 vs. NCBI nr
Match: XP_022948052.1 (early nodulin-like protein 1 [Cucurbita moschata])

HSP 1 Score: 307.8 bits (787), Expect = 2.3e-80
Identity = 165/195 (84.62%), Postives = 166/195 (85.13%), Query Frame = 0


Query: 1   MAPPTLAGFLALALALLAAMVSSSDAYKFYVGGGDGWVQNPSENFNHWAERNRFQVNDTL 60
           MAPPTLAGFLALALALLAAMVSSSDAYKFYVGGGDGWVQNPSENFNHWAERNRFQVNDTL
Sbjct: 1   MAPPTLAGFLALALALLAAMVSSSDAYKFYVGGGDGWVQNPSENFNHWAERNRFQVNDTL 60

Query: 61  ---------------------------LITLKDGESIFKFGHSGPFYFISGDADRCQKGQ 120
                                      +ITLKDGESIFKFGHSGPFYFISGDADRCQKGQ
Sbjct: 61  YFKYKNGTDSVLVVSKEDYFSCNTKNPVITLKDGESIFKFGHSGPFYFISGDADRCQKGQ 120

Query: 121 RLIVVVLALRHKQHLAPSPQAPTPTAQSPENAGSPESGVGFTAPVPAPAKSSAFGGSVST 169
           RLIVVVLALRHKQHLAPSPQAPTPTAQSPENAGSPESGVGFTAPVPAPAKSSAFG SVS 
Sbjct: 121 RLIVVVLALRHKQHLAPSPQAPTPTAQSPENAGSPESGVGFTAPVPAPAKSSAFGRSVSA 180

[Close]

BLAST of Carg13590 vs. NCBI nr
Match: XP_022970831.1 (early nodulin-like protein 1 [Cucurbita maxima])

HSP 1 Score: 303.1 bits (775), Expect = 5.7e-79
Identity = 162/195 (83.08%), Postives = 165/195 (84.62%), Query Frame = 0


Query: 1   MAPPTLAGFLALALALLAAMVSSSDAYKFYVGGGDGWVQNPSENFNHWAERNRFQVNDTL 60
           MAPPTLAGFLALAL+LLAAMVSSSDAYKFYVGG DGWV NPSENFNHWAERNRFQVNDTL
Sbjct: 1   MAPPTLAGFLALALSLLAAMVSSSDAYKFYVGGRDGWVPNPSENFNHWAERNRFQVNDTL 60

Query: 61  ---------------------------LITLKDGESIFKFGHSGPFYFISGDADRCQKGQ 120
                                      +ITLKDGESIFKFGHSGPFYFISGDADRCQKGQ
Sbjct: 61  YFKYKNGTDSVLVVSKEDYFSCNTKNPVITLKDGESIFKFGHSGPFYFISGDADRCQKGQ 120

Query: 121 RLIVVVLALRHKQHLAPSPQAPTPTAQSPENAGSPESGVGFTAPVPAPAKSSAFGGSVST 169
           RLIVVVLA+RHKQHLAPSPQAPTPTAQSPENAGSPESGVGFTAPVPAPAKSSAFGGSVS 
Sbjct: 121 RLIVVVLAVRHKQHLAPSPQAPTPTAQSPENAGSPESGVGFTAPVPAPAKSSAFGGSVSA 180

[Close]

BLAST of Carg13590 vs. NCBI nr
Match: XP_023534030.1 (early nodulin-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293.9 bits (751), Expect = 3.5e-76
Identity = 160/195 (82.05%), Postives = 162/195 (83.08%), Query Frame = 0


Query: 1   MAPPTLAGFLALALALLAAMVSSSDAYKFYVGGGDGWVQNPSENFNHWAERNRFQVNDTL 60
           MAPPTLA F  LALALLAAMVSSS AYKFYVGG DGWVQNPSENFNHWAERNRFQVNDTL
Sbjct: 1   MAPPTLAAF--LALALLAAMVSSSHAYKFYVGGRDGWVQNPSENFNHWAERNRFQVNDTL 60

Query: 61  ---------------------------LITLKDGESIFKFGHSGPFYFISGDADRCQKGQ 120
                                      +ITLKDGESIFKFGHSGPFYFISGDADRCQKGQ
Sbjct: 61  YFKYKNGTDSVLVVSKEDYFSCNTKNPVITLKDGESIFKFGHSGPFYFISGDADRCQKGQ 120

Query: 121 RLIVVVLALRHKQHLAPSPQAPTPTAQSPENAGSPESGVGFTAPVPAPAKSSAFGGSVST 169
           RLIVVVLA+RHKQHLAPSPQAPTPTAQSPENAGSPESGVGFTAPVPAPAKSSAFGGSVS 
Sbjct: 121 RLIVVVLAVRHKQHLAPSPQAPTPTAQSPENAGSPESGVGFTAPVPAPAKSSAFGGSVSA 180

[Close]

BLAST of Carg13590 vs. NCBI nr
Match: XP_008448305.1 (PREDICTED: early nodulin-like protein 1 [Cucumis melo])

HSP 1 Score: 151.4 bits (381), Expect = 2.8e-33
Identity = 94/191 (49.21%), Postives = 113/191 (59.16%), Query Frame = 0


Query: 19  AMVSSSDAYKFYVGGGDGWVQNPSENFNHWAERNRFQVNDTL------------------ 78
           AMV S +A KFYVGG DGW  NPSE+FNHWAERNRFQVNDTL                  
Sbjct: 18  AMVCSCEARKFYVGGKDGWGLNPSESFNHWAERNRFQVNDTLYFKYKNETESVLVVSKED 77

Query: 79  ---------LITLKD--GESIFKFGHSGPFYFISGDADRCQKGQRLIVVVLALRHKQH-- 138
                    +I+LK+  GES+FKFGHSGPFYFIS + D CQKGQ+LIVVVLAL H +H  
Sbjct: 78  YFSCNTKNPVISLKENNGESVFKFGHSGPFYFISENGDSCQKGQKLIVVVLALTHNKHHQ 137

Query: 139 ------------LAPSPQAPTPTAQSPENAGSPESGVGFTAPVPAPAKSSAFG-GSVSTL 166
                       +AP  Q+ +PTA+SPE +G+           PAPAKSSA G G V+  
Sbjct: 138 AQSQPPHSSFPPVAPPSQSLSPTAESPEKSGT----------APAPAKSSASGRGGVAFS 197

[Close]

BLAST of Carg13590 vs. NCBI nr
Match: XP_022140349.1 (early nodulin-like protein 1 [Momordica charantia])

HSP 1 Score: 144.4 bits (363), Expect = 3.4e-31
Identity = 93/194 (47.94%), Postives = 109/194 (56.19%), Query Frame = 0


Query: 4   PTLAGFLAL-ALALLAAMVSSSDAYKFYVGGGDGWVQNPSENFNHWAERNRFQVNDTL-- 63
           P+ + FLAL AL  L A  + S+AYKF VGG DGWV NPSE FNHWAERNRFQVNDTL  
Sbjct: 2   PSFSAFLALAALFALTAAPTFSEAYKFVVGGKDGWVFNPSEPFNHWAERNRFQVNDTLYF 61

Query: 64  -------------------------LITLKDGESIFKFGHSGPFYFISGDADRCQKGQRL 123
                                    +++ +DG+SIFKF  SGPFYFISG+ADRCQKGQ+L
Sbjct: 62  KYQNGTDSVLVVSKDDYFSCNTKNPIVSFQDGDSIFKFDRSGPFYFISGNADRCQKGQKL 121

Query: 124 IVVVLALRHKQHLAPSPQAPTPTAQSPENAGSPESGVGFTAPVPAPAKSSAFGGSVSTLS 167
           I                              SP+S  GFTAPVPAPAK+SA GG+ +  S
Sbjct: 122 I---------XXXXXXXXXXXXXXXXXXXXXSPDSAGGFTAPVPAPAKNSALGGAANVFS 181

[Close]

BLAST of Carg13590 vs. TAIR10
Match: AT4G28365.1 (early nodulin-like protein 3)

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-22
Identity = 50/111 (45.05%), Postives = 64/111 (57.66%), Query Frame = 0


Query: 24  SDAYKFYVGGGDGWVQNPSENFNHWAERNRFQVNDTL----------------------- 83
           S+ YKFYVGG DGWV  PSE+++HW+ RNRFQVNDTL                       
Sbjct: 24  SNGYKFYVGGKDGWVPTPSEDYSHWSHRNRFQVNDTLHFKYAKGKDSVLEVTEQEYNTCN 83

Query: 84  ----LITLKDGESIFKFGHSGPFYFISGDADRCQKGQRLIVVVLALRHKQH 108
               L +L DG+S+F   HSG ++FISG++  C KGQ+L V VL+  H  H
Sbjct: 84  TTHPLTSLSDGDSLFLLSHSGSYFFISGNSQNCLKGQKLAVKVLSTVHHSH 134

[Close]

BLAST of Carg13590 vs. TAIR10
Match: AT5G53870.1 (early nodulin-like protein 1)

HSP 1 Score: 103.2 bits (256), Expect = 1.6e-22
Identity = 64/147 (43.54%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 9   FLALALALLAAMVSSSDAYKFYVGGGDGWVQNPSENFNHWAERNRFQVNDTL-------- 68
           F  L LA  A   S +DA++F VGG   WV NP EN+N WAERNRFQVND+L        
Sbjct: 10  FSFLILASFATFFSVADAWRFNVGGNGAWVTNPQENYNTWAERNRFQVNDSLYFKYAKGS 69

Query: 69  -------------------LITLKDGESIFKFGHSGPFYFISGDADRCQKGQRLIVVVLA 128
                              +   ++GES+     SG FYFISG+ D CQKGQ+LIVVVLA
Sbjct: 70  DSVQQVMKADFDGCNVRNPIKNFENGESVVTLDRSGAFYFISGNQDHCQKGQKLIVVVLA 129

[Close]

BLAST of Carg13590 vs. TAIR10
Match: AT4G32490.1 (early nodulin-like protein 4)

HSP 1 Score: 99.0 bits (245), Expect = 3.0e-21
Identity = 48/118 (40.68%), Postives = 65/118 (55.08%), Query Frame = 0


Query: 17  LAAMVSSSDAYKFYVGGGDGWVQNPSENFNHWAERNRFQVNDTL---------------- 76
           L   +  S+ +KFYVGG DGWV  PSE+++HW+ RNRFQVNDTL                
Sbjct: 19  LGFSIELSNGHKFYVGGRDGWVLTPSEDYSHWSHRNRFQVNDTLYFKYVKGKDSVLEVSE 78

Query: 77  -----------LITLKDGESIFKFGHSGPFYFISGDADRCQKGQRLIVVVLALRHKQH 108
                      L +L DG+S+F    S PF+F+SG++  C KGQ+L V V++  H  H
Sbjct: 79  KEYNTCNTTHPLTSLSDGDSLFLLSRSDPFFFVSGNSGSCLKGQKLAVTVMSTGHHSH 136

[Close]

BLAST of Carg13590 vs. TAIR10
Match: AT4G27520.1 (early nodulin-like protein 2)

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-15
Identity = 52/141 (36.88%), Postives = 68/141 (48.23%), Query Frame = 0


Query: 9   FLALALALLAAMVSSSDAYKFYVGGGDGWVQNPSENFNHWAERNRFQVNDTLLIT----- 68
           F    L  L+ + + S+A KF VGG   WV NP EN+  W+ +NRF V+DTL  +     
Sbjct: 11  FFFTILLSLSTLFTISNARKFNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGA 70

Query: 69  ----------------------LKDGESIFKFGHSGPFYFISGDADRCQKGQRLIVVVLA 123
                                 + DG+S       GPFYFISG+ D C+KGQ+L VVV++
Sbjct: 71  DSVLEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVIS 130

[Close]

BLAST of Carg13590 vs. TAIR10
Match: AT3G20570.1 (early nodulin-like protein 9)

HSP 1 Score: 71.2 bits (173), Expect = 6.7e-13
Identity = 42/126 (33.33%), Postives = 65/126 (51.59%), Query Frame = 0


Query: 6   LAGFLALALALLAAMVSSSDAYKFYVGGGDGW-VQNPSENFNHWAERNRFQVNDTLLITL 65
           L GF  L   ++   V  + A +F VGG  GW V + S+ ++ WAE++RFQ+ D+LL   
Sbjct: 10  LCGFGLLCFLMI---VDRAYAREFTVGGATGWTVPSGSQVYSQWAEQSRFQIGDSLLFVY 69

Query: 66  K---------------------------DGESIFKFGHSGPFYFISGDADRCQKGQRLIV 104
           +                           DG++     HSGP+YFISG+ D C+K ++L+V
Sbjct: 70  QSNQDSVLQVTRDAYDSCNTDSPTAKFADGKTSVTLNHSGPYYFISGNKDNCKKNEKLVV 129

[Close]

BLAST of Carg13590 vs. Swiss-Prot
Match: sp|Q5JNJ5|ENL1_ORYSJ (Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ENODL1 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.5e-25
Identity = 67/162 (41.36%), Postives = 86/162 (53.09%), Query Frame = 0


Query: 12  LALALLAAMVSSSDAYKFYVGGGDGWVQNPSENFNHWAERNRFQVNDTLLITLKD----- 71
           +A+  L A+ SSS+AY FY GG DGWV +P+E+FN+WAERNRFQVNDT++    D     
Sbjct: 14  MAVLGLVAVFSSSEAYVFYAGGRDGWVVDPAESFNYWAERNRFQVNDTIVFLHDDEVGGS 73

Query: 72  --------------------------GESIFKFGHSGPFYFISGDADRCQKGQRLIVVVL 131
                                     G S+F+F  SGPF+FISGD DRCQKGQ+L ++V+
Sbjct: 74  VLQVTEGDFDTCSTGNPVQRLEDVAAGRSVFRFDRSGPFFFISGDEDRCQKGQKLYIIVM 133

Query: 132 ALR-HKQHLAPSPQAPTPTAQSPENAGSPESGVGFTAPVPAP 142
           A+R  K   AP P        S   +       G T P P P
Sbjct: 134 AVRPTKPSEAPEPAGAAGPVSSKSWSWQAFPPAGATTPPPLP 175

[Close]

BLAST of Carg13590 vs. Swiss-Prot
Match: sp|Q9T076|ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.0e-14
Identity = 52/141 (36.88%), Postives = 68/141 (48.23%), Query Frame = 0


Query: 9   FLALALALLAAMVSSSDAYKFYVGGGDGWVQNPSENFNHWAERNRFQVNDTLLIT----- 68
           F    L  L+ + + S+A KF VGG   WV NP EN+  W+ +NRF V+DTL  +     
Sbjct: 11  FFFTILLSLSTLFTISNARKFNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGA 70

Query: 69  ----------------------LKDGESIFKFGHSGPFYFISGDADRCQKGQRLIVVVLA 123
                                 + DG+S       GPFYFISG+ D C+KGQ+L VVV++
Sbjct: 71  DSVLEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVIS 130

[Close]

BLAST of Carg13590 vs. Swiss-Prot
Match: sp|Q9SK27|ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08
Identity = 50/152 (32.89%), Postives = 71/152 (46.71%), Query Frame = 0


Query: 10  LALALALLAAMVSSSDAYKFYVGGGDG-WVQNPSE--NFNHWAERNRFQVNDTL------ 69
           L +A+  L  + S + A +  VGG  G W   PS   +F  WA++ RF+V D +      
Sbjct: 12  LHVAIFSLIFLFSLAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYES 71

Query: 70  ---------------------LITLKDGESIFKFGHSGPFYFISGDADRCQKGQRLIVVV 129
                                L    DGE+  K   SGPFYFISG    C+KGQ+L +VV
Sbjct: 72  GKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVV 131

Query: 130 LALRHKQHLAPSPQAPTPTAQSPENAGSPESG 132
           ++ RH   ++P+P +P      P  A +P SG
Sbjct: 132 ISPRHSV-ISPAP-SPVEFEDGPALAPAPISG 161

[Close]

BLAST of Carg13590 vs. Swiss-Prot
Match: sp|Q8LC95|ENL3_ARATH (Early nodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g25090 PE=2 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 2.4e-04
Identity = 53/193 (27.46%), Postives = 76/193 (39.38%), Query Frame = 0


Query: 1   MAPPTLAGFLALALALLAAMVSSSDAYKFYVGG-GDGW--VQNPSENFNHWAERNRFQVN 60
           MA  TL     L   LL  +V S +     VGG    W    +PSE+ N WAE  RF+V 
Sbjct: 1   MAQRTLVATFFLIFFLLTNLVCSKE---IIVGGKTSSWKIPSSPSESLNKWAESLRFRVG 60

Query: 61  DTLL---------------------------ITLKDGESIFKFGHSGPFYFISGDADRCQ 120
           DTL+                               +G++  K   SGP++FISG    C 
Sbjct: 61  DTLVWKYDEEKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCV 120

Query: 121 KGQRLIVVVLALRHKQHLAPSPQAPTPTAQSPENAGSPESGVGFTAPVPAPAKSSAFGGS 164
           +G++L +VV++ R                      GS          + AP  + A GGS
Sbjct: 121 EGEKLHIVVMSSRGGH-------------TGGFFTGSSPXXXXXXXLLGAPTVAPASGGS 177

[Close]

BLAST of Carg13590 vs. TrEMBL
Match: tr|A0A1S3BJD3|A0A1S3BJD3_CUCME (early nodulin-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103490539 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.8e-33
Identity = 94/191 (49.21%), Postives = 113/191 (59.16%), Query Frame = 0


Query: 19  AMVSSSDAYKFYVGGGDGWVQNPSENFNHWAERNRFQVNDTL------------------ 78
           AMV S +A KFYVGG DGW  NPSE+FNHWAERNRFQVNDTL                  
Sbjct: 18  AMVCSCEARKFYVGGKDGWGLNPSESFNHWAERNRFQVNDTLYFKYKNETESVLVVSKED 77

Query: 79  ---------LITLKD--GESIFKFGHSGPFYFISGDADRCQKGQRLIVVVLALRHKQH-- 138
                    +I+LK+  GES+FKFGHSGPFYFIS + D CQKGQ+LIVVVLAL H +H  
Sbjct: 78  YFSCNTKNPVISLKENNGESVFKFGHSGPFYFISENGDSCQKGQKLIVVVLALTHNKHHQ 137

Query: 139 ------------LAPSPQAPTPTAQSPENAGSPESGVGFTAPVPAPAKSSAFG-GSVSTL 166
                       +AP  Q+ +PTA+SPE +G+           PAPAKSSA G G V+  
Sbjct: 138 AQSQPPHSSFPPVAPPSQSLSPTAESPEKSGT----------APAPAKSSASGRGGVAFS 197

[Close]

BLAST of Carg13590 vs. TrEMBL
Match: tr|A0A2I4FJE1|A0A2I4FJE1_9ROSI (early nodulin-like protein 1 OS=Juglans regia OX=51240 GN=LOC108999338 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.5e-30
Identity = 84/169 (49.70%), Postives = 101/169 (59.76%), Query Frame = 0


Query: 6   LAGFLALALALLAAMVSSSDAYKFYVGGGDGWVQNPSENFNHWAERNRFQVNDTLLITLK 65
           L GFL     +L A +SSS AYKF+VGG DGWV NP EN+NHWAERNRFQVNDTL    K
Sbjct: 9   LIGFL---FVVLMAFLSSSQAYKFFVGGKDGWVLNPPENYNHWAERNRFQVNDTLFFKYK 68

Query: 66  ---------------------------DGESIFKFGHSGPFYFISGDADRCQKGQRLIVV 125
                                      +G+S+FKF  SGPFYFISG+ D CQKGQ+LIVV
Sbjct: 69  KGSDSVSVVTKDRYDSCDNTNPIQSFTEGDSVFKFDRSGPFYFISGNVDHCQKGQKLIVV 128

Query: 126 VLALRHKQHLAPSPQAPTPTAQS---PENAGSPESGVGFTAPVPAPAKS 145
           VLA+R+K   AP P +P+P A +   P  A +PE G    +  PAP +S
Sbjct: 129 VLAVRNKTRHAP-PTSPSPAADTPALPPTAATPE-GESSRSGAPAPDQS 172

[Close]

BLAST of Carg13590 vs. TrEMBL
Match: tr|W9RA80|W9RA80_9ROSA (Early nodulin-like protein 1 OS=Morus notabilis OX=981085 GN=L484_010333 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 8.0e-29
Identity = 72/133 (54.14%), Postives = 87/133 (65.41%), Query Frame = 0


Query: 6   LAGFLALALALLAAMVSSSDAYKFYVGGGDGWVQNPSENFNHWAERNRFQVNDTLLI--- 65
           ++GFL   + L    VS S AYKF+VGG DGWV NPSENFNHWAERNRFQ+NDTLL    
Sbjct: 7   ISGFLLFTIFL--HFVSDSQAYKFFVGGKDGWVLNPSENFNHWAERNRFQINDTLLFKYK 66

Query: 66  ------------------------TLKDGESIFKFGHSGPFYFISGDADRCQKGQRLIVV 112
                                   +L +G+S FKF  SGPF+FISGDA++CQKGQ+L VV
Sbjct: 67  QGSDSILVVNKDDYNSCNIKNPTTSLTNGDSDFKFDRSGPFFFISGDAEKCQKGQKLHVV 126

[Close]

BLAST of Carg13590 vs. TrEMBL
Match: tr|A0A2P6PE64|A0A2P6PE64_ROSCH (Putative cupredoxin OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0225651 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.2e-27
Identity = 78/189 (41.27%), Postives = 103/189 (54.50%), Query Frame = 0


Query: 10  LALALALLAAMVSSSDAYKFYVGGGDGWVQNPSENFNHWAERNRFQVNDTLLITLK---- 69
           +++ + +  A+VS S A+KF+VGG DGW+ NPSENFNHWA R+RFQVNDTL    K    
Sbjct: 7   MSVLVVVFMALVSYSQAHKFFVGGKDGWIVNPSENFNHWAGRHRFQVNDTLCFKYKKGSN 66

Query: 70  -----------------------DGESIFKFGHSGPFYFISGDADRCQKGQRLIVVVLAL 129
                                  DG+S+F+F  SGPF+FISG+AD CQ GQ+LIVVVLAL
Sbjct: 67  SVLVVTKEDYYSCNNNNPIQYLTDGDSVFRFERSGPFFFISGNADDCQNGQKLIVVVLAL 126

Query: 130 RHKQHLAPSPQAPTPTAQSPENAGSPESGVGFTAPVPAPAKSSAF----GGSVSTLSLGV 168
           RHK     +P  P+P+  +  N+ S  S +      P    S +     G  V  + LG+
Sbjct: 127 RHKSDHGDAPLVPSPSPVASPNSDSNPSDLNNKPTPPLKENSGSLLRFKGSDVGLVCLGI 186

[Close]

BLAST of Carg13590 vs. TrEMBL
Match: tr|A0A2N9GGH5|A0A2N9GGH5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26574 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.4e-27
Identity = 63/119 (52.94%), Postives = 78/119 (65.55%), Query Frame = 0


Query: 21  VSSSDAYKFYVGGGDGWVQNPSENFNHWAERNRFQVNDTLLI------------------ 80
           +SSS A+KF VGG DGWV NPSEN+NHWAERNRF+VNDTL                    
Sbjct: 4   LSSSQAHKFLVGGKDGWVLNPSENYNHWAERNRFKVNDTLFFKYKKGSDSVLVVTKDHYN 63

Query: 81  ---------TLKDGESIFKFGHSGPFYFISGDADRCQKGQRLIVVVLALRHKQHLAPSP 113
                    +L DGES+FKF  SGPFYFISG+ D C+KGQ+LI++VLA+R++ H +P P
Sbjct: 64  SCNTTTPIQSLTDGESVFKFDRSGPFYFISGNGDNCRKGQKLIIIVLAVRNQTHHSPPP 122

The following BLAST results are available for this feature:

BLAST of Carg13590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948052.1	2.3e-80	84.62	early nodulin-like protein 1 [Cucurbita moschata]	[more]
XP_022970831.1	5.7e-79	83.08	early nodulin-like protein 1 [Cucurbita maxima]	[more]
XP_023534030.1	3.5e-76	82.05	early nodulin-like protein 1 [Cucurbita pepo subsp. pepo]	[more]
XP_008448305.1	2.8e-33	49.21	PREDICTED: early nodulin-like protein 1 [Cucumis melo]	[more]
XP_022140349.1	3.4e-31	47.94	early nodulin-like protein 1 [Momordica charantia]	[more]

BLAST of Carg13590 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28365.1	1.2e-22	45.05	early nodulin-like protein 3	[more]
AT5G53870.1	1.6e-22	43.54	early nodulin-like protein 1	[more]
AT4G32490.1	3.0e-21	40.68	early nodulin-like protein 4	[more]
AT4G27520.1	1.1e-15	36.88	early nodulin-like protein 2	[more]
AT3G20570.1	6.7e-13	33.33	early nodulin-like protein 9	[more]

BLAST of Carg13590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5JNJ5\|ENL1_ORYSJ	5.5e-25	41.36	Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ENODL1 ...	[more]
sp\|Q9T076\|ENL2_ARATH	2.0e-14	36.88	Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 S...	[more]
sp\|Q9SK27\|ENL1_ARATH	1.2e-08	32.89	Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 S...	[more]
sp\|Q8LC95\|ENL3_ARATH	2.4e-04	27.46	Early nodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g25090 PE=2 S...	[more]

BLAST of Carg13590 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BJD3\|A0A1S3BJD3_CUCME	1.8e-33	49.21	early nodulin-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103490539 PE=4 SV=1	[more]
tr\|A0A2I4FJE1\|A0A2I4FJE1_9ROSI	2.5e-30	49.70	early nodulin-like protein 1 OS=Juglans regia OX=51240 GN=LOC108999338 PE=4 SV=1	[more]
tr\|W9RA80\|W9RA80_9ROSA	8.0e-29	54.14	Early nodulin-like protein 1 OS=Morus notabilis OX=981085 GN=L484_010333 PE=4 SV...	[more]
tr\|A0A2P6PE64\|A0A2P6PE64_ROSCH	1.2e-27	41.27	Putative cupredoxin OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0225651 PE=4 SV=...	[more]
tr\|A0A2N9GGH5\|A0A2N9GGH5_FAGSY	3.4e-27	52.94	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26574 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

Vocabulary: **INTERPRO**
Term	Definition
IPR003245	Phytocyanin_dom
IPR039391	Phytocyanin
IPR008972	Cupredoxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13590-RA	Carg13590-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 26..63 e-value: 4.6E-7 score: 31.8
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 64..112 e-value: 9.3E-8 score: 33.6
IPR008972	Cupredoxin	SUPERFAMILY	SSF49503	Cupredoxins	coord: 26..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..135
None	No IPR available	PANTHER	PTHR33021:SF45	EARLY NODULIN-LIKE PROTEIN 3-RELATED	coord: 63..147
None	No IPR available	PANTHER	PTHR33021:SF45	EARLY NODULIN-LIKE PROTEIN 3-RELATED	coord: 9..61
IPR039391	Phytocyanin	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 63..147
IPR039391	Phytocyanin	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 9..61
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 67..103 e-value: 1.0E-9 score: 149.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg13590	Cla013553	Watermelon (97103) v1	carwmB0030
Carg13590	Csa6G127430	Cucumber (Chinese Long) v2	carcuB0030
Carg13590	MELO3C013629	Melon (DHL92) v3.5.1	carmeB0027
Carg13590	ClCG02G017730	Watermelon (Charleston Gray)	carwcgB0029
Carg13590	CSPI06G10340	Wild cucumber (PI 183967)	carcpiB0032
Carg13590	Cucsa.119200	Cucumber (Gy14) v1	carcgyB0030
Carg13590	CmaCh02G000950	Cucurbita maxima (Rimu)	carcmaB0042
Carg13590	CmoCh02G000950	Cucurbita moschata (Rifu)	carcmoB0044
Carg13590	Lsi10G016090	Bottle gourd (USVL1VR-Ls)	carlsiB027
Carg13590	Cp4.1LG05g14990	Cucurbita pepo (Zucchini)	carcpeB0048
Carg13590	CsGy6G010440	Cucumber (Gy14) v2	carcgybB0030
Carg13590	MELO3C013629.2	Melon (DHL92) v3.6.1	carmedB0029
Carg13590	CsaV3_6G012830	Cucumber (Chinese Long) v3	carcucB0032
Carg13590	Cla97C02G043490	Watermelon (97103) v2	carwmbB0024
Carg13590	Bhi10G000850	Wax gourd	carwgoB0036

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg13590	Silver-seed gourd	carcarB032
Carg13590	Silver-seed gourd	carcarB034
Carg13590	Silver-seed gourd	carcarB035
Carg13590	Cucumber (Gy14) v2	carcgybB0032
Carg13590	Cucumber (Gy14) v1	carcgyB0028
Carg13590	Cucurbita maxima (Rimu)	carcmaB0037
Carg13590	Cucurbita maxima (Rimu)	carcmaB0040
Carg13590	Cucurbita moschata (Rifu)	carcmoB0042
Carg13590	Cucurbita moschata (Rifu)	carcmoB0037
Carg13590	Cucurbita moschata (Rifu)	carcmoB0046
Carg13590	Cucurbita pepo (Zucchini)	carcpeB0044
Carg13590	Cucurbita pepo (Zucchini)	carcpeB0045
Carg13590	Cucurbita pepo (Zucchini)	carcpeB0047
Carg13590	Wild cucumber (PI 183967)	carcpiB0034
Carg13590	Cucumber (Chinese Long) v2	carcuB0032
Carg13590	Melon (DHL92) v3.5.1	carmeB0031
Carg13590	Melon (DHL92) v3.5.1	carmeB0033
Carg13590	Melon (DHL92) v3.6.1	carmedB0031
Carg13590	Melon (DHL92) v3.6.1	carmedB0034
Carg13590	Watermelon (97103) v1	carwmB0029