Carg13472 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGAGAAATGGAAGGCGGACGAGCAACTATTCCAGCTTCTTGCCAGTCTTCTTCACCAGGTCACAATTTCCCTCCACTTTCGCTCTTATTTCCCTATGTTCATTTCATTTCCTGTGATTTACCTTGTATGGCTTTCTAATTCTGTTCGTGATTGGATCGCTGGAACTTGCCTCATGATTGATGAAACATTTTGTGATTTTATAAGTGTCGGGGTTTCAAGACGATGGATCTAACCTCATTCATGGGGAGGAGAACGAAACACTTTTTATAAGGGGTGAAAACTTCTCCCTAGTAGATGCGTTTTAAAAATGTTGAGGGAAAATCCAAAATGCAAGGCACAAAGAGGACAGTTTTTGGTAACGGTGAACTTAAAACGTTGCATTATAGGTTTACACTAGAGTTGGGAAAGGCTGGGAATAGGTAACTTAGGGAGAGGAACATAATATCTTGATGAAATTGCTGTAGAGATTCACACCACATGATTTTCGTCACACTGTTCCCTTAGGGAATTGCTCTGGGAAGCAGTTACGTATTCTGATTGTTTGGCACCTAATTAATACAGTGAGTAGAAAATTTCTAGTCTATAACGGTCAACACCTTTGCCTTTCTTTGACCATGTAATGAGAAGAGAAAGTTTCCAAACTTGTTATGAACTTATGATCCACCCCTTTGGACGTAGGTTGTATTCACCTTCACGTTTGGGTACGGTATTATGTTTTTTGTTTCAATGAGTACCCATTGTGTAGTATGTTGGAAACTGCGATCCTCCACCGATAATGTCCACCTTTTAGCATAAGCTCTTATAGCAGCTTTACTTTTGGTTCTCAAAAGGCTTTGTACCAATGGAGATAGTGTTCCTTACTTATAAATTCATGCTCTTCTTCTTAATTAGTCGAGGCAGGACTAATTCTTTCAAAAATCCTCGGCATAAGTCCTAGCCAGGAAATGTTTTGAGCTTCTCTGCTCTTTTCTTTCCTAAGATACAATTATCTTGCAGGTGGAATCACTGACCAACCAGGAGGAAGTTGAACTTCGTATGAAGATCGAAGCCCTTGGACTTGAAGTAACAAAAGTACCCTCAAAGTCCTTAAAGCAGCTCGATGAAGTCCGTCTGGTTTCCTTCATAAACTCATTGCATTTATCAACATTTTCTTGAAGAGATTGAATCTAATGTCTAAAAAGTCCATTTCCTATCTATTCAGATGGAACTTGCCAAGGAGTTGGATAAGTTATCTGAAAAGCTAGACGATGTGGATGAAATGATTTCTTCAGCAATGGCTGCTGACCCACAGGTGCAGTCTCTTTTGAGTCATACTGCTGATATTTGGATGCCGGTGATAACTGCATCCACTGATGACCGGCGGAAGTTTACAGCTTCAGCTGGAGAAAATTCAGAAACAGAAAAGAATTGTGCAAGTTAG ATGGCCGAGAAATGGAAGGCGGACGAGCAACTATTCCAGCTTCTTGCCAGTCTTCTTCACCAGGTGGAATCACTGACCAACCAGGAGGAAGTTGAACTTCGTATGAAGATCGAAGCCCTTGGACTTGAAGTAACAAAAGTACCCTCAAAGTCCTTAAAGCAGCTCGATGAAGTCCGTCTGATGGAACTTGCCAAGGAGTTGGATAAGTTATCTGAAAAGCTAGACGATGTGGATGAAATGATTTCTTCAGCAATGGCTGCTGACCCACAGGTGCAGTCTCTTTTGAGTCATACTGCTGATATTTGGATGCCGGTGATAACTGCATCCACTGATGACCGGCGGAAGTTTACAGCTTCAGCTGGAGAAAATTCAGAAACAGAAAAGAATTGTGCAAGTTAG ATGGCCGAGAAATGGAAGGCGGACGAGCAACTATTCCAGCTTCTTGCCAGTCTTCTTCACCAGGTGGAATCACTGACCAACCAGGAGGAAGTTGAACTTCGTATGAAGATCGAAGCCCTTGGACTTGAAGTAACAAAAGTACCCTCAAAGTCCTTAAAGCAGCTCGATGAAGTCCGTCTGATGGAACTTGCCAAGGAGTTGGATAAGTTATCTGAAAAGCTAGACGATGTGGATGAAATGATTTCTTCAGCAATGGCTGCTGACCCACAGGTGCAGTCTCTTTTGAGTCATACTGCTGATATTTGGATGCCGGTGATAACTGCATCCACTGATGACCGGCGGAAGTTTACAGCTTCAGCTGGAGAAAATTCAGAAACAGAAAAGAATTGTGCAAGTTAG MAEKWKADEQLFQLLASLLHQVESLTNQEEVELRMKIEALGLEVTKVPSKSLKQLDEVRLMELAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSHTADIWMPVITASTDDRRKFTASAGENSETEKNCAS
BLAST of Carg13472 vs. NCBI nr
Match: XP_023004866.1 (uncharacterized protein LOC111498046 [Cucurbita maxima]) HSP 1 Score: 233.8 bits (595), Expect = 3.4e-58 Identity = 129/132 (97.73%), Postives = 129/132 (97.73%), Query Frame = 0
BLAST of Carg13472 vs. NCBI nr
Match: XP_022960425.1 (uncharacterized protein LOC111461159 [Cucurbita moschata]) HSP 1 Score: 227.3 bits (578), Expect = 3.1e-56 Identity = 128/133 (96.24%), Postives = 129/133 (96.99%), Query Frame = 0
BLAST of Carg13472 vs. NCBI nr
Match: XP_023514533.1 (uncharacterized protein LOC111778791 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 226.9 bits (577), Expect = 4.1e-56 Identity = 126/132 (95.45%), Postives = 127/132 (96.21%), Query Frame = 0
BLAST of Carg13472 vs. NCBI nr
Match: XP_022953424.1 (uncharacterized protein LOC111455983 [Cucurbita moschata] >XP_023547946.1 uncharacterized protein LOC111806741 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 206.1 bits (523), Expect = 7.5e-50 Identity = 115/132 (87.12%), Postives = 121/132 (91.67%), Query Frame = 0
BLAST of Carg13472 vs. NCBI nr
Match: XP_022991943.1 (uncharacterized protein LOC111488434 [Cucurbita maxima]) HSP 1 Score: 203.8 bits (517), Expect = 3.7e-49 Identity = 113/130 (86.92%), Postives = 120/130 (92.31%), Query Frame = 0
BLAST of Carg13472 vs. TAIR10
Match: AT2G44360.1 (unknown protein) HSP 1 Score: 156.8 bits (395), Expect = 9.5e-39 Identity = 88/120 (73.33%), Postives = 101/120 (84.17%), Query Frame = 0
BLAST of Carg13472 vs. TrEMBL
Match: tr|A0A0A0KBJ8|A0A0A0KBJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429570 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.2e-48 Identity = 113/132 (85.61%), Postives = 119/132 (90.15%), Query Frame = 0
BLAST of Carg13472 vs. TrEMBL
Match: tr|A0A1S3CEA0|A0A1S3CEA0_CUCME (uncharacterized protein LOC103499886 OS=Cucumis melo OX=3656 GN=LOC103499886 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.5e-46 Identity = 110/132 (83.33%), Postives = 117/132 (88.64%), Query Frame = 0
BLAST of Carg13472 vs. TrEMBL
Match: tr|A0A2P5E6J0|A0A2P5E6J0_9ROSA (Ecotropic viral integration site protein OS=Trema orientalis OX=63057 GN=TorRG33x02_230450 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.1e-40 Identity = 96/124 (77.42%), Postives = 110/124 (88.71%), Query Frame = 0
BLAST of Carg13472 vs. TrEMBL
Match: tr|A0A2P5D7B1|A0A2P5D7B1_PARAD (Ecotropic viral integration site protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_089160 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 3.6e-40 Identity = 95/124 (76.61%), Postives = 110/124 (88.71%), Query Frame = 0
BLAST of Carg13472 vs. TrEMBL
Match: tr|A0A072V8K2|A0A072V8K2_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=25486852 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 7.9e-40 Identity = 95/124 (76.61%), Postives = 109/124 (87.90%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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