Carg13457 (gene) Silver-seed gourd

Overview
NameCarg13457
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTranscription factor bHLH130 like
LocationCucurbita_argyrosperma_scaffold_049 : 580398 .. 582398 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGGTTTTGTTGATCATCTGGGTTTCATCCGATTTCAGTTTTTTAGGGTTTGGAATTTCGTCGAACAGTTTAGAGGCATACCCTGATTTTATGGACTGCGATTCCACGAATATCCATAGCGCTGGTGGGCTTATGCGCTATTGGTCTGCTCCGACCTCTGTGTTTGCGAATCTCCTCGATGGAACTGAAGGTCTTCTTCCGAGTAACAATGGCGGCGGCGGCGGTAGTGGGGCAGAGGACTATCGGGTCATTCGATCTACGAGCCCTGTGGTGGTTAATCGATCTTGTTCGATGGTTAATTGTGGTGGTGGAGATCAGATTGGGAACTCGTTGGGGGTTATGAATTTGGATAACTCGGTGCAATTGGATTTGGGTGCGAGGAATTCCGGTAATCTTTTCCTATACTTCTTGGTGTCTGGCTTTGATACTATTGTAACAGCCCAAACCCACAGTTGGTGCACTGCTCGGTTTCTAGCTATGATACCATTGTAACGTCTCAAACCCATATTTGGTTGGTACTCTGTGGTTGGCTGGTTCTGATACCATTGTAACCACTCAAACCCACCGCTGGTACACTGTTCGGTATCTGGCTCTAATATCATTGTAACAACCCAAATCCACTACTCTTCAACAAATGTGGGATCTCACACTTCATCCCTTTAGGGACCCAACGTTCTTACTGGCACACTGCCTGCAACCTGGCTCTGATACCATTTGTAACAGGTCAAGCCCATCGCTAGTAGATATTGTTCTCTTCAGCCTTTTCCTTGCGAGCTTCCCCTCAAGGTTTTAAAACGCTTGGGAGTGGTTTCTACACCCTGATAAAGAATGCTTTGTTCTACTCTCTAAACGATGTGAGATCTGACAGTTTCTTAGTCGGTAGTGAGAGTAGTAAACTCATTATATCGTGAATTATATAGTTTAGAATGAATGGGTTTTAAAAGGATCGACCTCTTGTCGACTCGCAGGCAATACGACGAGGCAATATGACGACGATTTCCTCAACAGTTCTTGGCATAACTCTGCAACCAGGGACTTAAAAAGAGGTAGAGATAACAATGGGCGAACGTTTCCGACATCGATCGTGCTCGAAACTCAGGTACAATGCAACGTAGTGAGTTGTTTACACCTGCAAGTTTGGCTTAGCTTAACAATTCTTTGTTCTGCAGAATGCTGGTTATGAAAATAACAATCGTGGATTGGCTCATCATTTGAGCTTTCCTATAACTTTCAACAATGATCCGGTGGAGAAGTTTTTTAGATTTCAAGAACATCCTATTCGTCACCAAATTCGAGCTAAACGTGGATGCGCCACGCACCCACGAAGCATTGCCGAGCGGGTAAACCCTGTCTGCTTTCGATCAAACCGCTGTCGTACACTGATTAACTGCATTTAAATTCTTAAATCTCCAAGTTTTTGAATTTTTAGAATAGAAGAACTCGAATTAGTGAAAGAATGAAGAAACTACAAGAGCTGTTTCCTGACATGGATAAGGTAATTTATCCTCACCCTCGATGATACATCGTGCTAACGTCGTACAATTTCAATGTTCAAAGACTAAATCGTTCGATCCATCGATCGATCTTTCCTTGCAGCAGACGAGCAAAGCTGAAATGCTGGAGTTGGCCGTTGAATACATCAAAGGCCTGCAGAGACAGGTCAAGGTAACAGTTAAAGACAACCTTAAGTTAATCGAATCACATGATGATCCAACTGCCACTTTTGTCTCATGAAAAGCTCTGTATTTGTTTTGGTGCAGACCCTCACTGATACGAATGCGAAATGCGCGTGCTTGTGCTCGAGTCGATAACAAGAAGAAACACGTATATTGTAGCTTGGTTTCGATTTGTACAGACCATATGTAAGCTTTAAGGAACATGAAGATCCAAGAACAAATACAAAACAACGTTGTTTACTATGTTTAAAATTGTAGGATTCTACGAAGATTGTCTGTGTAATTGTATTATATGTTAGAAGTTCCATATAAGATCCAATTGAAC

mRNA sequence

TGGGTTTTGTTGATCATCTGGGTTTCATCCGATTTCAGTTTTTTAGGGTTTGGAATTTCGTCGAACAGTTTAGAGGCATACCCTGATTTTATGGACTGCGATTCCACGAATATCCATAGCGCTGGTGGGCTTATGCGCTATTGGTCTGCTCCGACCTCTGTGTTTGCGAATCTCCTCGATGGAACTGAAGGTCTTCTTCCGAGTAACAATGGCGGCGGCGGCGGTAGTGGGGCAGAGGACTATCGGGTCATTCGATCTACGAGCCCTGTGGTGGTTAATCGATCTTGCAATACGACGAGGCAATATGACGACGATTTCCTCAACAGTTCTTGGCATAACTCTGCAACCAGGGACTTAAAAAGAGGTAGAGATAACAATGGGCGAACGTTTCCGACATCGATCGTGCTCGAAACTCAGAATGCTGGTTATGAAAATAACAATCGTGGATTGGCTCATCATTTGAGCTTTCCTATAACTTTCAACAATGATCCGGTGGAGAAGTTTTTTAGATTTCAAGAACATCCTATTCGTCACCAAATTCGAGCTAAACGTGGATGCGCCACGCACCCACGAAGCATTGCCGAGCGGAATAGAAGAACTCGAATTAGTGAAAGAATGAAGAAACTACAAGAGCTGTTTCCTGACATGGATAAGCAGACGAGCAAAGCTGAAATGCTGGAGTTGGCCGTTGAATACATCAAAGGCCTGCAGAGACAGGTCAAGACCCTCACTGATACGAATGCGAAATGCGCGTGCTTGTGCTCGAGTCGATAACAAGAAGAAACACGTATATTGTAGCTTGGTTTCGATTTGTACAGACCATATGTAAGCTTTAAGGAACATGAAGATCCAAGAACAAATACAAAACAACGTTGTTTACTATGTTTAAAATTGTAGGATTCTACGAAGATTGTCTGTGTAATTGTATTATATGTTAGAAGTTCCATATAAGATCCAATTGAAC

Coding sequence (CDS)

TGGGTTTTGTTGATCATCTGGGTTTCATCCGATTTCAGTTTTTTAGGGTTTGGAATTTCGTCGAACAGTTTAGAGGCATACCCTGATTTTATGGACTGCGATTCCACGAATATCCATAGCGCTGGTGGGCTTATGCGCTATTGGTCTGCTCCGACCTCTGTGTTTGCGAATCTCCTCGATGGAACTGAAGGTCTTCTTCCGAGTAACAATGGCGGCGGCGGCGGTAGTGGGGCAGAGGACTATCGGGTCATTCGATCTACGAGCCCTGTGGTGGTTAATCGATCTTGCAATACGACGAGGCAATATGACGACGATTTCCTCAACAGTTCTTGGCATAACTCTGCAACCAGGGACTTAAAAAGAGGTAGAGATAACAATGGGCGAACGTTTCCGACATCGATCGTGCTCGAAACTCAGAATGCTGGTTATGAAAATAACAATCGTGGATTGGCTCATCATTTGAGCTTTCCTATAACTTTCAACAATGATCCGGTGGAGAAGTTTTTTAGATTTCAAGAACATCCTATTCGTCACCAAATTCGAGCTAAACGTGGATGCGCCACGCACCCACGAAGCATTGCCGAGCGGAATAGAAGAACTCGAATTAGTGAAAGAATGAAGAAACTACAAGAGCTGTTTCCTGACATGGATAAGCAGACGAGCAAAGCTGAAATGCTGGAGTTGGCCGTTGAATACATCAAAGGCCTGCAGAGACAGGTCAAGACCCTCACTGATACGAATGCGAAATGCGCGTGCTTGTGCTCGAGTCGATAA

Protein sequence

WVLLIIWVSSDFSFLGFGISSNSLEAYPDFMDCDSTNIHSAGGLMRYWSAPTSVFANLLDGTEGLLPSNNGGGGGSGAEDYRVIRSTSPVVVNRSCNTTRQYDDDFLNSSWHNSATRDLKRGRDNNGRTFPTSIVLETQNAGYENNNRGLAHHLSFPITFNNDPVEKFFRFQEHPIRHQIRAKRGCATHPRSIAERNRRTRISERMKKLQELFPDMDKQTSKAEMLELAVEYIKGLQRQVKTLTDTNAKCACLCSSR
Homology
[Close]
BLAST of Carg13457 vs. NCBI nr
Match: XP_022960424.1 (transcription factor bHLH130-like [Cucurbita moschata])

HSP 1 Score: 459.1 bits (1180), Expect = 9.6e-126
Identity = 250/312 (80.13%), Postives = 252/312 (80.77%), Query Frame = 0 

Query: 1   WVLLIIWVSSDFSFLGFGISSNSLEAYPDFMDCDSTNIHSAGGLMRYWSAPTSVFANLLD 60
           WVLLIIWVSSDF FLGFGISSNSLEAYPDFMDCDSTNIHSAGGLMRYWSAPTSVFANLLD
Sbjct: 4   WVLLIIWVSSDFRFLGFGISSNSLEAYPDFMDCDSTNIHSAGGLMRYWSAPTSVFANLLD 63

Query: 61  GTEGLLPSXXXXXXXXXXXDYRVIRSTSPVVVNRSC------------------------ 120
           GTEGLLPSXXXXXXXXX  DYRVIRSTSPVVVNRSC                        
Sbjct: 64  GTEGLLPSXXXXXXXXXAEDYRVIRSTSPVVVNRSCSMVNCGGGDQIGNSLGVMNLNNSM 123

Query: 121 -------------------------------NTTRQYDDDFLNSSWHNSATRDLKRGRDN 180
                                          NTTRQYDD+FLNSSWHNSA +DLKRGRDN
Sbjct: 124 QLDLGARNSGNLFRQSSSPAGIFSNFTAENGNTTRQYDDNFLNSSWHNSAIKDLKRGRDN 183

Query: 181 NGRTFPTSIVLETQNAGYENNNRGLAHHLSFPITFNNDPVEKFFRFQEHPIRHQIRAKRG 240
           NGRTF TSIVLETQNAGYENNNRGLAHHLSFPITFNNDPVEKFFRFQEHPIRHQIRAKRG
Sbjct: 184 NGRTFSTSIVLETQNAGYENNNRGLAHHLSFPITFNNDPVEKFFRFQEHPIRHQIRAKRG 243

Query: 241 CATHPRSIAERNRRTRISERMKKLQELFPDMDKQTSKAEMLELAVEYIKGLQRQVKTLTD 258
           CATHPRSIAERNRRTRISERMKKLQELFPDMDKQTSKAEMLELAVEYIKGLQRQVKTLTD
Sbjct: 244 CATHPRSIAERNRRTRISERMKKLQELFPDMDKQTSKAEMLELAVEYIKGLQRQVKTLTD 303

[Close]
BLAST of Carg13457 vs. NCBI nr
Match: XP_023514537.1 (transcription factor bHLH130-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 456.1 bits (1172), Expect = 8.1e-125
Identity = 241/312 (77.24%), Postives = 243/312 (77.88%), Query Frame = 0 

Query: 1   WVLLIIWVSSDFSFLGFGISSNSLEAYPDFMDCDSTNIHSAGGLMRYWSAPTSVFANLLD 60
           WVLLIIWVSSDF FLGFGISSNSLEAYPDFMDCDSTNIHSAGGLMRYWSAPTSVFANLLD
Sbjct: 4   WVLLIIWVSSDFIFLGFGISSNSLEAYPDFMDCDSTNIHSAGGLMRYWSAPTSVFANLLD 63

Query: 61  GTEGLLPSXXXXXXXXXXXDYRVIRSTSPVVVNRSC------------------------ 120
           GTEGLLPS           DYRVIRSTSPVVVNRSC                        
Sbjct: 64  GTEGLLPS-NNGGGGSGAEDYRVIRSTSPVVVNRSCSMVNCGGGDQIGNSLGVMNLNNSM 123

Query: 121 -------------------------------NTTRQYDDDFLNSSWHNSATRDLKRGRDN 180
                                          NTTRQYDDDFLNSSWHNSAT+DLKRGRDN
Sbjct: 124 QLDLGARNSGNLFRQSSSPAGIFSHFTAENGNTTRQYDDDFLNSSWHNSATKDLKRGRDN 183

Query: 181 NGRTFPTSIVLETQNAGYENNNRGLAHHLSFPITFNNDPVEKFFRFQEHPIRHQIRAKRG 240
           NGRTFPTSIVLETQ AGYENNN GLAHHLSFPITFNNDPVEKFFRFQEHPIRHQIRAKRG
Sbjct: 184 NGRTFPTSIVLETQKAGYENNNSGLAHHLSFPITFNNDPVEKFFRFQEHPIRHQIRAKRG 243

Query: 241 CATHPRSIAERNRRTRISERMKKLQELFPDMDKQTSKAEMLELAVEYIKGLQRQVKTLTD 258
           CATHPRSIAERNRRTRIS+RMKKLQELFPDMDKQTSKAEMLELAVEYIKGLQRQVKTLTD
Sbjct: 244 CATHPRSIAERNRRTRISDRMKKLQELFPDMDKQTSKAEMLELAVEYIKGLQRQVKTLTD 303

[Close]
BLAST of Carg13457 vs. NCBI nr
Match: XP_023004869.1 (transcription factor bHLH81-like [Cucurbita maxima])

HSP 1 Score: 444.5 bits (1142), Expect = 2.4e-121
Identity = 250/322 (77.64%), Postives = 251/322 (77.95%), Query Frame = 0 

Query: 1   WVLLIIWVSSDFSFLGFGISSNSLEAYPDFMDCDSTNIHSAGGLMRYWSAPTSVFANLLD 60
           WVLLIIWVSSDF FLGFGISSNSLEAYPDFMD DSTNIHSAGGLMRYWSAPTSVFANLLD
Sbjct: 4   WVLLIIWVSSDFRFLGFGISSNSLEAYPDFMDRDSTNIHSAGGLMRYWSAPTSVFANLLD 63

Query: 61  GTEGL----LPSXXXXXXXXXXXDYRVIRSTSPVVVNRSC-------------------- 120
           GTEGL       XXXXXXXXXXXDYRVIRSTSPVVVNRSC                    
Sbjct: 64  GTEGLXXXXXXXXXXXXXXXXXXDYRVIRSTSPVVVNRSCSMVNRSLVNCGVGAQTGNSL 123

Query: 121 -----------------------------------------NTTRQYDDDFLNSSWHNSA 180
                                                    NTTRQYDDDFLNSSWHNSA
Sbjct: 124 GVMNLNNSMQFDLGARNAGNLFRQSSSPAVGVFSHLTAENGNTTRQYDDDFLNSSWHNSA 183

Query: 181 TRDLKRGRDNNGRTFPTSIVLETQNAGYENNNRGLAHHLSFPITFNNDPVEKFFRFQEHP 240
            +DLKRGRDNNGRTFPTSIVLETQNAGYENNNRGLAHHLSFPITFNNDPVEKFFRFQEHP
Sbjct: 184 IKDLKRGRDNNGRTFPTSIVLETQNAGYENNNRGLAHHLSFPITFNNDPVEKFFRFQEHP 243

Query: 241 IRHQIRAKRGCATHPRSIAERNRRTRISERMKKLQELFPDMDKQTSKAEMLELAVEYIKG 258
           IRHQIRAKRGCATHPRSIAERNRRTRISERMKKLQELFPDMDKQTSKAEMLELAVEYIKG
Sbjct: 244 IRHQIRAKRGCATHPRSIAERNRRTRISERMKKLQELFPDMDKQTSKAEMLELAVEYIKG 303

[Close]
BLAST of Carg13457 vs. NCBI nr
Match: XP_022153257.1 (transcription factor bHLH130-like [Momordica charantia])

HSP 1 Score: 241.1 bits (614), Expect = 4.1e-60
Identity = 164/418 (39.23%), Postives = 194/418 (46.41%), Query Frame = 0 

Query: 17  FGISSNSLEAYPDFMDCDST------NIHSAGGLMRYWSAPTSVFANLLDGTEGLLPSXX 76
           F  S++ ++ YPDFMDCD+       + H++GGL+ Y SAPTS+FA+L+DG EGL  S  
Sbjct: 9   FKFSNDEMKKYPDFMDCDTNPNHPPQDHHNSGGLLGYCSAPTSLFASLVDGAEGLNSSEN 68

Query: 77  XXXXXXXXXDYRVIRSTSP---VVVNR--------------------------------- 136
                    DYR++RS+SP   V+++R                                 
Sbjct: 69  GGGDGGGREDYRLVRSSSPEVEVILSRFMASCNGTVDSGSQGLGETVVKQETVESIHQQN 128

Query: 137 ------------------------------------------------------------ 196
                                                                       
Sbjct: 129 GYRNXXXXXXXXXXXXXXAGARIGNSFSVMNSSDFGNSMQLQLGARNCSNLFRQNSSPAG 188

Query: 197 ---------SCNTTRQ-------------------------------------------- 256
                     CNTTR                                             
Sbjct: 189 FFSHLTAENGCNTTRDVEKFGTCNRKDADAAYPLTTRIGNQLNLSGQSFGSSHMPPIAEE 248

Query: 257 ---------------------YDDDFLNSSWHNSATRDLKRGRDNNGRTFPTSIVLETQN 258
                                + DDFLNSSW  SA RDLKRGRDNNGRTF TSI+LET+N
Sbjct: 249 ENKSMDVVSSSHHRIQKVDRLHTDDFLNSSWDESAMRDLKRGRDNNGRTFSTSIMLETKN 308

[Close]
BLAST of Carg13457 vs. NCBI nr
Match: XP_022954323.1 (transcription factor bHLH130-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 238.0 bits (606), Expect = 3.5e-59
Identity = 121/146 (82.88%), Postives = 129/146 (88.36%), Query Frame = 0 

Query: 107 LNSSWHNSATRDLKRGRDNNGRTFPTSIVLETQNAGYENNNRGLAHHLSFPITFNNDPVE 166
           + SSW +S  RDLKRGRDNNGRTFPTSI+LETQNA   N+ RGLAHHLS PITFN DPVE
Sbjct: 230 VRSSWDSSTIRDLKRGRDNNGRTFPTSILLETQNADSGNDIRGLAHHLSLPITFNKDPVE 289

Query: 167 KFFRFQEHPIRHQIRAKRGCATHPRSIAERNRRTRISERMKKLQELFPDMDKQTSKAEML 226
           KF RF+E P+RHQIRAKRGCATHPRSIAER RR RISERMKKLQELFPDMDKQTS A+ML
Sbjct: 290 KFLRFEE-PVRHQIRAKRGCATHPRSIAERMRRIRISERMKKLQELFPDMDKQTSTADML 349

Query: 227 ELAVEYIKGLQRQVKTLTDTNAKCAC 253
           ELA+EYIKGLQRQVKTLTDT AKC C
Sbjct: 350 ELAIEYIKGLQRQVKTLTDTKAKCTC 374

[Close]
BLAST of Carg13457 vs. TAIR10
Match: AT2G42280.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-28
Identity = 76/160 (47.50%), Postives = 104/160 (65.00%), Query Frame = 0 

Query: 103 DDDFLNSSWHNSAT-----RDLKRGRDNNGRTFPTSIVLETQNAGYENNNRGLAHHLSFP 162
           + +F  S W++ ++       LKR  +++G+ F     L  QN    N  + L+HHLS P
Sbjct: 199 ETNFPYSHWNDPSSFIDNLSSLKREAEDDGKLF-----LGAQNGESGNRMQLLSHHLSLP 258

Query: 163 ITFNND----PVEKFFRFQEHPIRHQIRAKRGCATHPRSIAERNRRTRISERMKKLQELF 222
            + +       V+K+ + Q+  +  +IRAKRGCATHPRSIAER RRTRISERM+KLQEL 
Sbjct: 259 KSSSTASDMVSVDKYLQLQD-SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELV 318

Query: 223 PDMDKQTSKAEMLELAVEYIKGLQRQVKTLTDTNAKCACL 254
           P+MDKQT+ ++ML+LAV+YIK LQRQ K L D  A C C+
Sbjct: 319 PNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCM 352

[Close]
BLAST of Carg13457 vs. TAIR10
Match: AT1G51140.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 111.3 bits (277), Expect = 8.9e-25
Identity = 60/103 (58.25%), Postives = 78/103 (75.73%), Query Frame = 0 

Query: 150 LAHHLSFPITFNNDPVEKFFRFQEHPIRHQIRAKRGCATHPRSIAERNRRTRISERMKKL 209
           LAHH+S P + ++  +E+        I  +IRAKRGCATHPRSIAER RRT+ISERM+KL
Sbjct: 279 LAHHMSLPKSLSD--IEQLL---SDSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKL 338

Query: 210 QELFPDMDKQTSKAEMLELAVEYIKGLQRQVKTLTDTNAKCAC 253
           Q+L P+MD QT+ A+ML+LAV+YIK LQ QVK L ++ A+C C
Sbjct: 339 QDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRARCRC 376

[Close]
BLAST of Carg13457 vs. TAIR10
Match: AT1G05805.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 110.5 bits (275), Expect = 1.5e-24
Identity = 57/109 (52.29%), Postives = 76/109 (69.72%), Query Frame = 0 

Query: 149 GLAHHLSFPITFNNDPVEKFFRFQEHPIRHQIRAKRGCATHPRSIAERNRRTRISERMKK 208
           GL    S P   + + ++ F +  E  +  +IRAKRGCATHPRSIAER RRTRIS ++KK
Sbjct: 252 GLFSQYSLPSDTSMNYMDNFMQLPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKK 311

Query: 209 LQELFPDMDKQTSKAEMLELAVEYIKGLQRQVKTLTDTNAKCACLCSSR 258
           LQ+L P+MDKQTS ++ML+LAV++IKGLQ Q++ L      C C CS +
Sbjct: 312 LQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQENCTCGCSEK 360

[Close]
BLAST of Carg13457 vs. TAIR10
Match: AT4G09180.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 106.7 bits (265), Expect = 2.2e-23
Identity = 52/81 (64.20%), Postives = 67/81 (82.72%), Query Frame = 0 

Query: 173 EHPIRHQIRAKRGCATHPRSIAERNRRTRISERMKKLQELFPDMDKQTSKAEMLELAVEY 232
           E  +  ++RAKRGCATHPRSIAER RRTRIS+R++KLQEL P+MDKQT+ A+MLE AVEY
Sbjct: 177 EDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEY 236

Query: 233 IKGLQRQVKTLTDTNAKCACL 254
           +K LQRQ++ LT+   +C C+
Sbjct: 237 VKVLQRQIQELTEEQKRCTCI 257

[Close]
BLAST of Carg13457 vs. TAIR10
Match: AT1G35460.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 5.4e-22
Identity = 50/80 (62.50%), Postives = 65/80 (81.25%), Query Frame = 0 

Query: 173 EHPIRHQIRAKRGCATHPRSIAERNRRTRISERMKKLQELFPDMDKQTSKAEMLELAVEY 232
           E  +  ++RAKRGCATHPRSIAER RRTRIS+R+++LQEL P+MDKQT+ A+MLE AVEY
Sbjct: 174 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEY 233

Query: 233 IKGLQRQVKTLTDTNAKCAC 253
           +K LQ Q++ LT+   +C C
Sbjct: 234 VKALQSQIQELTEQQKRCKC 253

[Close]
BLAST of Carg13457 vs. Swiss-Prot
Match: sp|Q66GR3|BH130_ARATH (Transcription factor bHLH130 OS=Arabidopsis thaliana OX=3702 GN=BHLH130 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.4e-27
Identity = 76/160 (47.50%), Postives = 104/160 (65.00%), Query Frame = 0 

Query: 103 DDDFLNSSWHNSAT-----RDLKRGRDNNGRTFPTSIVLETQNAGYENNNRGLAHHLSFP 162
           + +F  S W++ ++       LKR  +++G+ F     L  QN    N  + L+HHLS P
Sbjct: 199 ETNFPYSHWNDPSSFIDNLSSLKREAEDDGKLF-----LGAQNGESGNRMQLLSHHLSLP 258

Query: 163 ITFNND----PVEKFFRFQEHPIRHQIRAKRGCATHPRSIAERNRRTRISERMKKLQELF 222
            + +       V+K+ + Q+  +  +IRAKRGCATHPRSIAER RRTRISERM+KLQEL 
Sbjct: 259 KSSSTASDMVSVDKYLQLQD-SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELV 318

Query: 223 PDMDKQTSKAEMLELAVEYIKGLQRQVKTLTDTNAKCACL 254
           P+MDKQT+ ++ML+LAV+YIK LQRQ K L D  A C C+
Sbjct: 319 PNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCM 352

[Close]
BLAST of Carg13457 vs. Swiss-Prot
Match: sp|Q9C690|BH122_ARATH (Transcription factor bHLH122 OS=Arabidopsis thaliana OX=3702 GN=BHLH122 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.6e-23
Identity = 60/103 (58.25%), Postives = 78/103 (75.73%), Query Frame = 0 

Query: 150 LAHHLSFPITFNNDPVEKFFRFQEHPIRHQIRAKRGCATHPRSIAERNRRTRISERMKKL 209
           LAHH+S P + ++  +E+        I  +IRAKRGCATHPRSIAER RRT+ISERM+KL
Sbjct: 279 LAHHMSLPKSLSD--IEQLL---SDSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKL 338

Query: 210 QELFPDMDKQTSKAEMLELAVEYIKGLQRQVKTLTDTNAKCAC 253
           Q+L P+MD QT+ A+ML+LAV+YIK LQ QVK L ++ A+C C
Sbjct: 339 QDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRARCRC 376

[Close]
BLAST of Carg13457 vs. Swiss-Prot
Match: sp|Q8H102|BH128_ARATH (Transcription factor bHLH128 OS=Arabidopsis thaliana OX=3702 GN=BHLH128 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.7e-23
Identity = 57/109 (52.29%), Postives = 76/109 (69.72%), Query Frame = 0 

Query: 149 GLAHHLSFPITFNNDPVEKFFRFQEHPIRHQIRAKRGCATHPRSIAERNRRTRISERMKK 208
           GL    S P   + + ++ F +  E  +  +IRAKRGCATHPRSIAER RRTRIS ++KK
Sbjct: 252 GLFSQYSLPSDTSMNYMDNFMQLPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKK 311

Query: 209 LQELFPDMDKQTSKAEMLELAVEYIKGLQRQVKTLTDTNAKCACLCSSR 258
           LQ+L P+MDKQTS ++ML+LAV++IKGLQ Q++ L      C C CS +
Sbjct: 312 LQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQENCTCGCSEK 360

[Close]
BLAST of Carg13457 vs. Swiss-Prot
Match: sp|Q9M0R0|BH081_ARATH (Transcription factor bHLH81 OS=Arabidopsis thaliana OX=3702 GN=BHLH81 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.9e-22
Identity = 52/81 (64.20%), Postives = 67/81 (82.72%), Query Frame = 0 

Query: 173 EHPIRHQIRAKRGCATHPRSIAERNRRTRISERMKKLQELFPDMDKQTSKAEMLELAVEY 232
           E  +  ++RAKRGCATHPRSIAER RRTRIS+R++KLQEL P+MDKQT+ A+MLE AVEY
Sbjct: 177 EDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEY 236

Query: 233 IKGLQRQVKTLTDTNAKCACL 254
           +K LQRQ++ LT+   +C C+
Sbjct: 237 VKVLQRQIQELTEEQKRCTCI 257

[Close]
BLAST of Carg13457 vs. Swiss-Prot
Match: sp|Q9C8P8|BH080_ARATH (Transcription factor bHLH80 OS=Arabidopsis thaliana OX=3702 GN=BHLH80 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 9.7e-21
Identity = 50/80 (62.50%), Postives = 65/80 (81.25%), Query Frame = 0 

Query: 173 EHPIRHQIRAKRGCATHPRSIAERNRRTRISERMKKLQELFPDMDKQTSKAEMLELAVEY 232
           E  +  ++RAKRGCATHPRSIAER RRTRIS+R+++LQEL P+MDKQT+ A+MLE AVEY
Sbjct: 174 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEY 233

Query: 233 IKGLQRQVKTLTDTNAKCAC 253
           +K LQ Q++ LT+   +C C
Sbjct: 234 VKALQSQIQELTEQQKRCKC 253

[Close]
BLAST of Carg13457 vs. TrEMBL
Match: tr|A0A0A0K9U6|A0A0A0K9U6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428890 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.5e-58
Identity = 123/146 (84.25%), Postives = 127/146 (86.99%), Query Frame = 0 

Query: 100 RQYDDDFLNSSWHNSATRDLKRGRDNNGRTFPTSIVLETQNAGYENNNRGLAHHLSFPIT 159
           R   DDFLNSSW NSA RD KRGRDNNGR F TSIVLETQNA   NN RGLAHHLS PI+
Sbjct: 263 RLQTDDFLNSSWDNSAMRDTKRGRDNNGRAFATSIVLETQNADSGNNIRGLAHHLSLPIS 322

Query: 160 FNNDPVEKFFRFQEHPIRHQIRAKRGCATHPRSIAERNRRTRISERMKKLQELFPDMDKQ 219
           FN DPVEKF RFQE P+ HQIRAKRGCATHPRSIAER RRTRISER+KKLQELFPDMDKQ
Sbjct: 323 FNKDPVEKFLRFQE-PVPHQIRAKRGCATHPRSIAERMRRTRISERIKKLQELFPDMDKQ 382

Query: 220 TSKAEMLELAVEYIKGLQRQVKTLTD 246
           TS A+MLELAVEYIKGLQRQVKTLTD
Sbjct: 383 TSTADMLELAVEYIKGLQRQVKTLTD 407

[Close]
BLAST of Carg13457 vs. TrEMBL
Match: tr|A0A1S3CEB7|A0A1S3CEB7_CUCME (transcription factor bHLH130-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499905 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.8e-57
Identity = 120/146 (82.19%), Postives = 127/146 (86.99%), Query Frame = 0 

Query: 100 RQYDDDFLNSSWHNSATRDLKRGRDNNGRTFPTSIVLETQNAGYENNNRGLAHHLSFPIT 159
           R   DDFLNSSW NSA RD+KRGRDNNG  F TSIVL+TQNA   NN RGLAHHLS PI+
Sbjct: 263 RLQTDDFLNSSWDNSAMRDIKRGRDNNGHAFSTSIVLKTQNADSGNNIRGLAHHLSLPIS 322

Query: 160 FNNDPVEKFFRFQEHPIRHQIRAKRGCATHPRSIAERNRRTRISERMKKLQELFPDMDKQ 219
           FN DPVEK+ RFQE P+ HQIRAKRGCATHPRSIAER RRTRISER+KKLQELFPDMDKQ
Sbjct: 323 FNKDPVEKYLRFQE-PVPHQIRAKRGCATHPRSIAERMRRTRISERIKKLQELFPDMDKQ 382

Query: 220 TSKAEMLELAVEYIKGLQRQVKTLTD 246
           TS A+MLELAVEYIKGLQRQVKTLTD
Sbjct: 383 TSTADMLELAVEYIKGLQRQVKTLTD 407

[Close]
BLAST of Carg13457 vs. TrEMBL
Match: tr|A0A1S3CEB2|A0A1S3CEB2_CUCME (transcription factor bHLH130-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499905 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.9e-56
Identity = 120/147 (81.63%), Postives = 127/147 (86.39%), Query Frame = 0 

Query: 100 RQYDDDFLNSSWHNSATRDLKRGRDNNGRTFPTSIVLET-QNAGYENNNRGLAHHLSFPI 159
           R   DDFLNSSW NSA RD+KRGRDNNG  F TSIVL+T QNA   NN RGLAHHLS PI
Sbjct: 263 RLQTDDFLNSSWDNSAMRDIKRGRDNNGHAFSTSIVLKTQQNADSGNNIRGLAHHLSLPI 322

Query: 160 TFNNDPVEKFFRFQEHPIRHQIRAKRGCATHPRSIAERNRRTRISERMKKLQELFPDMDK 219
           +FN DPVEK+ RFQE P+ HQIRAKRGCATHPRSIAER RRTRISER+KKLQELFPDMDK
Sbjct: 323 SFNKDPVEKYLRFQE-PVPHQIRAKRGCATHPRSIAERMRRTRISERIKKLQELFPDMDK 382

Query: 220 QTSKAEMLELAVEYIKGLQRQVKTLTD 246
           QTS A+MLELAVEYIKGLQRQVKTLTD
Sbjct: 383 QTSTADMLELAVEYIKGLQRQVKTLTD 408

[Close]
BLAST of Carg13457 vs. TrEMBL
Match: tr|A0A1S3CER3|A0A1S3CER3_CUCME (transcription factor bHLH130-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499905 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.9e-54
Identity = 119/147 (80.95%), Postives = 126/147 (85.71%), Query Frame = 0 

Query: 100 RQYDDDFLNSSWHNSATRDLKRGRDNNGRTFPTSIVLET-QNAGYENNNRGLAHHLSFPI 159
           R   DDFLNSSW NSA RD+KRGRDNNG  F TSIVL+T QNA   NN RGLAHHLS PI
Sbjct: 263 RLQTDDFLNSSWDNSAMRDIKRGRDNNGHAFSTSIVLKTQQNADSGNNIRGLAHHLSLPI 322

Query: 160 TFNNDPVEKFFRFQEHPIRHQIRAKRGCATHPRSIAERNRRTRISERMKKLQELFPDMDK 219
           +FN DPVEK+ RFQE P+ HQIRAKRGCATHPRSIAER RRTRISER+KKLQELFPDMDK
Sbjct: 323 SFNKDPVEKYLRFQE-PVPHQIRAKRGCATHPRSIAERMRRTRISERIKKLQELFPDMDK 382

Query: 220 QTSKAEMLELAVEYIKGLQRQVKTLTD 246
            TS A+MLELAVEYIKGLQRQVKTLTD
Sbjct: 383 -TSTADMLELAVEYIKGLQRQVKTLTD 407

[Close]
BLAST of Carg13457 vs. TrEMBL
Match: tr|A0A2N9FJL3|A0A2N9FJL3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18878 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.3e-40
Identity = 98/170 (57.65%), Postives = 117/170 (68.82%), Query Frame = 0 

Query: 84  IRSTSPVVVNRSCNTTRQYDDDFLNSSWHNSATRDLKRGRDNNGRTFPTSIVLETQNAGY 143
           I S +   +  +  + + +   F + SW  SA   L+R RDN G  FPTS  LETQNA  
Sbjct: 204 ITSPADQSLENANGSNQHFVPKFTSDSWDESAFNSLRRARDNEGNMFPTSNALETQNADS 263

Query: 144 ENNNRGLAHHLSFPIT-FNNDPVEKFFRFQEHPIRHQIRAKRGCATHPRSIAERNRRTRI 203
            N  RGL HHLS P T      +EK+ +FQ   +  +IRAKRG ATHPRSIAER RRTRI
Sbjct: 264 GNRPRGLTHHLSLPKTSIEMATIEKYLQFQ-GSVPCKIRAKRGFATHPRSIAERVRRTRI 323

Query: 204 SERMKKLQELFPDMDKQTSKAEMLELAVEYIKGLQRQVKTLTDTNAKCAC 253
           SERM+KLQELFP+MDKQT+ A+ML+LAVEYIK LQ+QVKTLTDT AKC C
Sbjct: 324 SERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQVKTLTDTKAKCTC 372

The following BLAST results are available for this feature:
BLAST of Carg13457 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022960424.19.6e-12680.13transcription factor bHLH130-like [Cucurbita moschata][more]
XP_023514537.18.1e-12577.24transcription factor bHLH130-like [Cucurbita pepo subsp. pepo][more]
XP_023004869.12.4e-12177.64transcription factor bHLH81-like [Cucurbita maxima][more]
XP_022153257.14.1e-6039.23transcription factor bHLH130-like [Momordica charantia][more]
XP_022954323.13.5e-5982.88transcription factor bHLH130-like isoform X1 [Cucurbita moschata][more]
BLAST of Carg13457 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G42280.11.3e-2847.50basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G51140.18.9e-2558.25basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G05805.11.5e-2452.29basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G09180.12.2e-2364.20basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G35460.15.4e-2262.50basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of Carg13457 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q66GR3|BH130_ARATH2.4e-2747.50Transcription factor bHLH130 OS=Arabidopsis thaliana OX=3702 GN=BHLH130 PE=1 SV=... [more]
sp|Q9C690|BH122_ARATH1.6e-2358.25Transcription factor bHLH122 OS=Arabidopsis thaliana OX=3702 GN=BHLH122 PE=1 SV=... [more]
sp|Q8H102|BH128_ARATH2.7e-2352.29Transcription factor bHLH128 OS=Arabidopsis thaliana OX=3702 GN=BHLH128 PE=1 SV=... [more]
sp|Q9M0R0|BH081_ARATH3.9e-2264.20Transcription factor bHLH81 OS=Arabidopsis thaliana OX=3702 GN=BHLH81 PE=2 SV=1[more]
sp|Q9C8P8|BH080_ARATH9.7e-2162.50Transcription factor bHLH80 OS=Arabidopsis thaliana OX=3702 GN=BHLH80 PE=2 SV=1[more]
BLAST of Carg13457 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K9U6|A0A0A0K9U6_CUCSA2.5e-5884.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428890 PE=4 SV=1[more]
tr|A0A1S3CEB7|A0A1S3CEB7_CUCME2.8e-5782.19transcription factor bHLH130-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
tr|A0A1S3CEB2|A0A1S3CEB2_CUCME6.9e-5681.63transcription factor bHLH130-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
tr|A0A1S3CER3|A0A1S3CER3_CUCME4.9e-5480.95transcription factor bHLH130-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
tr|A0A2N9FJL3|A0A2N9FJL3_FAGSY5.3e-4057.65Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18878 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR036638HLH_DNA-bd_sf
IPR011598bHLH_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg13457-RACarg13457-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 192..242
e-value: 1.1E-13
score: 61.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 192..237
e-value: 1.6E-11
score: 43.9
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 186..236
score: 15.186
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 190..241
e-value: 7.34044E-13
score: 60.3055
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3DG3DSA:4.10.280.10coord: 188..254
e-value: 2.0E-14
score: 55.5
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILYSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 189..251
NoneNo IPR availablePANTHERPTHR16223:SF69SUBFAMILY NOT NAMEDcoord: 99..253
NoneNo IPR availablePANTHERPTHR16223FAMILY NOT NAMEDcoord: 99..253

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg13457Cla015223Watermelon (97103) v1carwmB0448
Carg13457Csa7G428890Cucumber (Chinese Long) v2carcuB0484
Carg13457ClCG09G004340Watermelon (Charleston Gray)carwcgB0440
Carg13457CSPI07G19440Wild cucumber (PI 183967)carcpiB0489
Carg13457Cucsa.050160Cucumber (Gy14) v1carcgyB0519
Carg13457CmaCh08G005430Cucurbita maxima (Rimu)carcmaB0628
Carg13457CmaCh17G009420Cucurbita maxima (Rimu)carcmaB0625
Carg13457CmoCh17G009180Cucurbita moschata (Rifu)carcmoB0608
Carg13457CmoCh08G005340Cucurbita moschata (Rifu)carcmoB0610
Carg13457Lsi02G025930Bottle gourd (USVL1VR-Ls)carlsiB409
Carg13457Cp4.1LG17g08200Cucurbita pepo (Zucchini)carcpeB0632
Carg13457Cp4.1LG12g06890Cucurbita pepo (Zucchini)carcpeB0631
Carg13457CsGy7G017760Cucumber (Gy14) v2carcgybB0461
Carg13457CsaV3_7G031270Cucumber (Chinese Long) v3carcucB0486
Carg13457Cla97C09G166650Watermelon (97103) v2carwmbB0473
Carg13457Bhi09G000512Wax gourdcarwgoB0546
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg13457Carg18688Silver-seed gourdcarcarB379
The following block(s) are covering this gene:
GeneOrganismBlock
Carg13457Silver-seed gourdcarcarB452
Carg13457Silver-seed gourdcarcarB453
Carg13457Silver-seed gourdcarcarB454
Carg13457Silver-seed gourdcarcarB455
Carg13457Cucumber (Gy14) v2carcgybB0460
Carg13457Cucurbita maxima (Rimu)carcmaB0624
Carg13457Cucurbita maxima (Rimu)carcmaB0626
Carg13457Cucurbita maxima (Rimu)carcmaB0627
Carg13457Cucurbita moschata (Rifu)carcmoB0607
Carg13457Cucurbita moschata (Rifu)carcmoB0609
Carg13457Cucurbita pepo (Zucchini)carcpeB0633
Carg13457Cucurbita pepo (Zucchini)carcpeB0634
Carg13457Cucurbita pepo (Zucchini)carcpeB0635
Carg13457Wild cucumber (PI 183967)carcpiB0488
Carg13457Cucumber (Chinese Long) v2carcuB0483
Carg13457Cucumber (Chinese Long) v3carcucB0485
Carg13457Bottle gourd (USVL1VR-Ls)carlsiB410
Carg13457Melon (DHL92) v3.5.1carmeB0455
Carg13457Melon (DHL92) v3.5.1carmeB0457
Carg13457Melon (DHL92) v3.6.1carmedB0458
Carg13457Melon (DHL92) v3.6.1carmedB0460
Carg13457Watermelon (Charleston Gray)carwcgB0442
Carg13457Watermelon (Charleston Gray)carwcgB0443
Carg13457Watermelon (97103) v1carwmB0451
Carg13457Watermelon (97103) v1carwmB0452
Carg13457Watermelon (97103) v2carwmbB0471
Carg13457Watermelon (97103) v2carwmbB0472
Carg13457Watermelon (97103) v2carwmbB0475
Carg13457Wax gourdcarwgoB0542
Carg13457Wax gourdcarwgoB0544