Carg13357 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATCCTCTGTTCTTGTTTCTATATATTATTAATATCTTATCCCACTTCCTCTTACTGTTCTTACGTCCTCAATTTCTTCCTTTTCTTGCCCGGATTTTCTGTTTTTGTACTTGTTCGTCTCTGGTTTCTTTGTTTTGGACGAACCCATTTTCGTTTTTTGATTCTTCTGCCTTATACACGACGACCCAGATCGCGTTTCTGCATCGGTCGACGTTTTATGTATCTGGGTTTCTGATTTGGGATTGAATCGTTCTGTTTTTGTACTTCTTCGTCTCTGGTTTCTTGTTTAGGACGAACCCCATTTTCGTTTCTCTTAATTTTTTGATTCTTCTGCCTTATACACGACGCCCCAGATCGTGTTTCTGCATCGTTCGGCGTTTTTCATGTCTGGGTTTCTGATTTGTTCGTCTCTGGTTTCCTGTTTTGGACGAACCCATTTTCGTTTCTCTTAATTTTTTGATTCTTCTGCCTATTACACGACGACCCAGATCGTGTTTCTGCATCATTCATCGTTTTTCGTATCTGGGTTTCTGATTTGGGATTGAATCGTTCTGTTTTGTGGCTAATTCTTTGTCGTTGGGGAAGGTTTTTGAAGGGAAACAGAGGAGGGTTTTTGTTGTTGTGTTCTAATGACGACGGAAACGAGAGCGGTGGATCGAGAGAGTATTAGAATTGGGCATGTGAATAAGGTTCAGTACGTGAAAAGGGATATTAAGAAGAGGAAATGTAGAAGGATGAAGCGGTCTGTTCCAGTGGTTCCTATGGCGCTTCAGGAACTCTTTGTTTCTTGCAGGGATGTGTTCAAAGGCCCTGGAACCGTTCCATTGCCTTGTGATGTTGATAAGCTCTGTCGCATTCTTGGTATGTTTCAGATCCAATCTATTTCCATTTGATTCTTTTGTTGTTCTTGAATCTCTATTAACTAAGCTTAGTTGGGCCCAGTTGATTCTTTGATTTCCTTTTGTCTTTACATTCTTGTCTGAGTGACATGGCGTGGAAAGTTCTCGAAGCGTTTCGGAAACCTCTTCTTAACAAATGCGTTTTAAAACCGTGAGTTTGATGACAATATATAACATGCCAATACAGATAATGTTTGCTAGCGGTGGATATAGTAGGTTACAAATGGTATCTGAATTAGACATTAGGCGACGTGCCAGGGAGGACAGTGGGTCCCAATGAGGGTGGATTGTAAGGTCCCACGTTGGTTGGAGAGGAGAATGAACATTTCTTATAAGGGCGTGGAAACCCCTCATTGTGATGCTAACAACGATACCTAATAGAAACGACTTCCCTTTAGTGATTTGTCATATCAAATCATGCTTTTATGTTCTTGTCAGCCTATGCTCTTAGGATTCTTTATATTTAGACTTAGACCCATCGAGAGGAAGATATAAACGACTTCTTCTGTGAGATCCCACATCGATCGGAGAGGGAAATGAAGCCTTTTTTATAAGGGTGTAGAAATCTCTCTCTAATAGACGTGTTTTAAAACCGTGAGGCGGATGACAATATGGAATGGGCCAAAGTAAACAATATCTACGGGCGTTGAGCTTGAATATGATAGTTTTTTTTTTAATGTTATTATAATTTCTTTGTTTTTGGATGGTGCAGATAATATGAGAGCAGAAGACGTTGGACTTAGTAGTAATTTGCAGTTTTTCAATCCCAATGTTCAAGTCAAAGGATCATCCCCTAGAGTAACATGCACTACCATATACAACTGTGACAATTTCTCGGTAAGCTTAGCTCGCACGAACAACCGAACCCTTGTTAGGACCATTTCCACTTAGTTCTCAACGAAGTTACCTTTAGCTCCACCTTATTCTCGAAAAATACTAGCCATTTGTTAGCAGTGCCACCACTCAGTCACGTAAGGGAATGGGGTAACAACCGACCTCTTGTTAAGACCATTTCCACTTTGTTCTCAATAGATCTCACTCCTTGGGGGAGACAAGCTACCTTTAGCTCCACCTTATTCTCGAAAATGACTAGCAATTTGTTAGCAGCGCCACCACTTGGTCATGTAAGGGAATGGTGAACAACCGAACCCTTTCCGAGACCGTTTCCACTTTGTTCTCACCCCTAGGGAGAGACAAGCTACCTTTAGCTTTACCTTATATAGGGTTGGCCGAGGGCTAATGTAGGGTTGTTCTTCATTATTCCTTGTCCGCTCACGCTAACAACCGATTCCTTACTTATTAGTCGAGATCATACTGTTTCGGGTTTGCTTTGTTCGAATTTCTGATGCCATTTCCCCTGCTTTTATGCAGTTATGCATCTTCTTCCTCCCAGCAACTGGTGTAATCCCTTTACACAACCATCCAGGAATGACTGTTTTCAGTAAACTTCTGTTGGGGAAAATGCACATCAAATCATATGATTGGGTCGATCCAACGAACACCGACGATCCTGCCCAACCTCGTCAAAGTGAGCGCCTCGAAACTTTCTTATTATAAACATGAATCTCTCGTGAAAATCAACCCGAAAGTGCTGATGGACTGTTTTGCTTTGCAGAAAGATTAGCAAAGCTGAAGGCCGACGCTGTCTTCACCTCGCCCTGCAGTACCTCTGTTTTGTACCCAACAACAGGAGGCAACATCCACTCCTTCACTGCTGTAACGCCATGTGCGGTGCTCGATGTGATCGGACCTCCTTATTCCATGGAGGACGGTCGAGATTGTTCATATTATAAGGAG AATCCTCTGTTCTTGTTTCTATATATTATTAATATCTTATCCCACTTCCTCTTACTGTTCTTACGTCCTCAATTTCTTCCTTTTCTTGCCCGGATTTTCTGTTTTTGTACTTGTTCGTCTCTGGTTTCTTTGTTTTGGACGAACCCATTTTCGTTTTTTGATTCTTCTGCCTTATACACGACGACCCAGATCGCGTTTCTGCATCGGTCGACGTTTTATGTATCTGGGTTTCTGATTTGGGATTGAATCGTTCTGTTTTTGTACTTCTTCGTCTCTGGTTTCTTGTTTAGGACGAACCCCATTTTCGTTTCTCTTAATTTTTTGATTCTTCTGCCTATTACACGACGACCCAGATCGTGTTTCTGCATCATTCATCGTTTTTCGTATCTGGGTTTCTGATTTGGGATTGAATCGTTCTGTTTTGTGGCTAATTCTTTGTCGTTGGGGAAGGTTTTTGAAGGGAAACAGAGGAGGGTTTTTGTTGTTGTGTTCTAATGACGACGGAAACGAGAGCGGTGGATCGAGAGAGTATTAGAATTGGGCATGTGAATAAGGTTCAGTACGTGAAAAGGGATATTAAGAAGAGGAAATGTAGAAGGATGAAGCGGTCTGTTCCAGTGGTTCCTATGGCGCTTCAGGAACTCTTTGTTTCTTGCAGGGATGTGTTCAAAGGCCCTGGAACCGTTCCATTGCCTTGTGATGTTGATAAGCTCTGTCGCATTCTTGATAATATGAGAGCAGAAGACGTTGGACTTAGTAGTAATTTGCAGTTTTTCAATCCCAATGTTCAAGTCAAAGGATCATCCCCTAGAGTAACATGCACTACCATATACAACTGTGACAATTTCTCGTTATGCATCTTCTTCCTCCCAGCAACTGGTGTAATCCCTTTACACAACCATCCAGGAATGACTGTTTTCAGTAAACTTCTGTTGGGGAAAATGCACATCAAATCATATGATTGGGTCGATCCAACGAACACCGACGATCCTGCCCAACCTCGTCAAAAAAGATTAGCAAAGCTGAAGGCCGACGCTGTCTTCACCTCGCCCTGCAGTACCTCTGTTTTGTACCCAACAACAGGAGGCAACATCCACTCCTTCACTGCTGTAACGCCATGTGCGGTGCTCGATGTGATCGGACCTCCTTATTCCATGGAGGACGGTCGAGATTGTTCATATTATAAGGAG ATGACGACGGAAACGAGAGCGGTGGATCGAGAGAGTATTAGAATTGGGCATGTGAATAAGGTTCAGTACGTGAAAAGGGATATTAAGAAGAGGAAATGTAGAAGGATGAAGCGGTCTGTTCCAGTGGTTCCTATGGCGCTTCAGGAACTCTTTGTTTCTTGCAGGGATGTGTTCAAAGGCCCTGGAACCGTTCCATTGCCTTGTGATGTTGATAAGCTCTGTCGCATTCTTGATAATATGAGAGCAGAAGACGTTGGACTTAGTAGTAATTTGCAGTTTTTCAATCCCAATGTTCAAGTCAAAGGATCATCCCCTAGAGTAACATGCACTACCATATACAACTGTGACAATTTCTCGTTATGCATCTTCTTCCTCCCAGCAACTGGTGTAATCCCTTTACACAACCATCCAGGAATGACTGTTTTCAGTAAACTTCTGTTGGGGAAAATGCACATCAAATCATATGATTGGGTCGATCCAACGAACACCGACGATCCTGCCCAACCTCGTCAAAAAAGATTAGCAAAGCTGAAGGCCGACGCTGTCTTCACCTCGCCCTGCAGTACCTCTGTTTTGTACCCAACAACAGGAGGCAACATCCACTCCTTCACTGCTGTAACGCCATGTGCGGTGCTCGATGTGATCGGACCTCCTTATTCCATGGAGGACGGTCGAGATTGTTCATATTATAAGGAG MTTETRAVDRESIRIGHVNKVQYVKRDIKKRKCRRMKRSVPVVPMALQELFVSCRDVFKGPGTVPLPCDVDKLCRILDNMRAEDVGLSSNLQFFNPNVQVKGSSPRVTCTTIYNCDNFSLCIFFLPATGVIPLHNHPGMTVFSKLLLGKMHIKSYDWVDPTNTDDPAQPRQKRLAKLKADAVFTSPCSTSVLYPTTGGNIHSFTAVTPCAVLDVIGPPYSMEDGRDCSYYKE
BLAST of Carg13357 vs. NCBI nr
Match: XP_023518747.1 (plant cysteine oxidase 2-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023518748.1 plant cysteine oxidase 2-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 476.9 bits (1226), Expect = 4.0e-131 Identity = 227/232 (97.84%), Postives = 229/232 (98.71%), Query Frame = 0
BLAST of Carg13357 vs. NCBI nr
Match: XP_022966423.1 (plant cysteine oxidase 2-like [Cucurbita maxima]) HSP 1 Score: 474.9 bits (1221), Expect = 1.5e-130 Identity = 227/232 (97.84%), Postives = 228/232 (98.28%), Query Frame = 0
BLAST of Carg13357 vs. NCBI nr
Match: XP_022924929.1 (plant cysteine oxidase 2-like [Cucurbita moschata]) HSP 1 Score: 474.2 bits (1219), Expect = 2.6e-130 Identity = 226/232 (97.41%), Postives = 229/232 (98.71%), Query Frame = 0
BLAST of Carg13357 vs. NCBI nr
Match: XP_004149110.1 (PREDICTED: 2-aminoethanethiol dioxygenase-like [Cucumis sativus] >KGN53913.1 hypothetical protein Csa_4G188410 [Cucumis sativus]) HSP 1 Score: 431.0 bits (1107), Expect = 2.5e-117 Identity = 204/229 (89.08%), Postives = 219/229 (95.63%), Query Frame = 0
BLAST of Carg13357 vs. NCBI nr
Match: XP_008442017.1 (PREDICTED: plant cysteine oxidase 2-like [Cucumis melo]) HSP 1 Score: 427.2 bits (1097), Expect = 3.6e-116 Identity = 205/230 (89.13%), Postives = 218/230 (94.78%), Query Frame = 0
BLAST of Carg13357 vs. TAIR10
Match: AT5G15120.1 (Protein of unknown function (DUF1637)) HSP 1 Score: 220.7 bits (561), Expect = 9.4e-58 Identity = 104/190 (54.74%), Postives = 135/190 (71.05%), Query Frame = 0
BLAST of Carg13357 vs. TAIR10
Match: AT5G39890.1 (Protein of unknown function (DUF1637)) HSP 1 Score: 208.8 bits (530), Expect = 3.7e-54 Identity = 107/207 (51.69%), Postives = 134/207 (64.73%), Query Frame = 0
BLAST of Carg13357 vs. TAIR10
Match: AT1G18490.1 (Protein of unknown function (DUF1637)) HSP 1 Score: 176.8 bits (447), Expect = 1.6e-44 Identity = 88/199 (44.22%), Postives = 114/199 (57.29%), Query Frame = 0
BLAST of Carg13357 vs. TAIR10
Match: AT3G58670.1 (Protein of unknown function (DUF1637)) HSP 1 Score: 169.1 bits (427), Expect = 3.2e-42 Identity = 85/199 (42.71%), Postives = 116/199 (58.29%), Query Frame = 0
BLAST of Carg13357 vs. TAIR10
Match: AT2G42670.2 (Protein of unknown function (DUF1637)) HSP 1 Score: 162.9 bits (411), Expect = 2.3e-40 Identity = 78/199 (39.20%), Postives = 118/199 (59.30%), Query Frame = 0
BLAST of Carg13357 vs. Swiss-Prot
Match: sp|Q9LXG9|PCO1_ARATH (Plant cysteine oxidase 1 OS=Arabidopsis thaliana OX=3702 GN=PCO1 PE=1 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 1.7e-56 Identity = 104/190 (54.74%), Postives = 135/190 (71.05%), Query Frame = 0
BLAST of Carg13357 vs. Swiss-Prot
Match: sp|Q8LGJ5|PCO2_ARATH (Plant cysteine oxidase 2 OS=Arabidopsis thaliana OX=3702 GN=PCO2 PE=1 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 6.7e-53 Identity = 107/207 (51.69%), Postives = 134/207 (64.73%), Query Frame = 0
BLAST of Carg13357 vs. Swiss-Prot
Match: sp|Q1G3U6|PCO3_ARATH (Plant cysteine oxidase 3 OS=Arabidopsis thaliana OX=3702 GN=PCO3 PE=1 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 2.8e-43 Identity = 88/199 (44.22%), Postives = 114/199 (57.29%), Query Frame = 0
BLAST of Carg13357 vs. Swiss-Prot
Match: sp|Q9LXT4|PCO5_ARATH (Plant cysteine oxidase 5 OS=Arabidopsis thaliana OX=3702 GN=PCO5 PE=1 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 5.8e-41 Identity = 85/199 (42.71%), Postives = 116/199 (58.29%), Query Frame = 0
BLAST of Carg13357 vs. Swiss-Prot
Match: sp|Q9SJI9|PCO4_ARATH (Plant cysteine oxidase 4 OS=Arabidopsis thaliana OX=3702 GN=PCO4 PE=1 SV=2) HSP 1 Score: 165.6 bits (418), Expect = 6.5e-40 Identity = 78/197 (39.59%), Postives = 116/197 (58.88%), Query Frame = 0
BLAST of Carg13357 vs. TrEMBL
Match: tr|A0A0A0KWK6|A0A0A0KWK6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G188410 PE=4 SV=1) HSP 1 Score: 431.0 bits (1107), Expect = 1.7e-117 Identity = 204/229 (89.08%), Postives = 219/229 (95.63%), Query Frame = 0
BLAST of Carg13357 vs. TrEMBL
Match: tr|A0A1S3B5D6|A0A1S3B5D6_CUCME (plant cysteine oxidase 2-like OS=Cucumis melo OX=3656 GN=LOC103486005 PE=4 SV=1) HSP 1 Score: 427.2 bits (1097), Expect = 2.4e-116 Identity = 205/230 (89.13%), Postives = 218/230 (94.78%), Query Frame = 0
BLAST of Carg13357 vs. TrEMBL
Match: tr|A0A2I4E0G9|A0A2I4E0G9_9ROSI (plant cysteine oxidase 1-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108985159 PE=4 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 6.6e-90 Identity = 167/234 (71.37%), Postives = 189/234 (80.77%), Query Frame = 0
BLAST of Carg13357 vs. TrEMBL
Match: tr|A0A2I4E0G3|A0A2I4E0G3_9ROSI (plant cysteine oxidase 1-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108985159 PE=4 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 6.6e-90 Identity = 167/234 (71.37%), Postives = 189/234 (80.77%), Query Frame = 0
BLAST of Carg13357 vs. TrEMBL
Match: tr|A0A2P5BEB4|A0A2P5BEB4_9ROSA (Cysteine oxygenase/2-aminoethanethiol dioxygenase OS=Trema orientalis OX=63057 GN=TorRG33x02_324160 PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 1.5e-86 Identity = 166/239 (69.46%), Postives = 191/239 (79.92%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |