Carg13336 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13336
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ubiquitin-conjugating enzyme, E2
Location	Cucurbita_argyrosperma_scaffold_038 : 1040205 .. 1044901 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAACTTTGCTCTTGTTACTTACTGTGAATGTGGAAATGGGGATGGGGGATTTTGAGAATTAGGGTTTTTCTTGGTTGTTCTTGCCGTCGATTGGAATGTTTGTTTCCACAAGTGTTTTGTTCTTCTGATGCTGTAGTTTAAGCGTTCGAAGCTAGTCTTAGCAATTAGGGCACTTCTTTCGTAAATTTCAGCCCCGAAATCTTGCTTTATCACTGTGTTTTTCCCCTTTATAAACTTCTCTTTTGGGGTTTTAGCAACGGGAAGTTCTTTTTCTGACATAAAATGCTCTTTCCTGATGTTTGATTTTGCAGCTCTAATTGTTTCATTCTTGCACCGTTTCTTGTTAACACTCAATTCATGAAATAATTGTGCATAAATCAGTGGTCGATTGTTTTTAATTCCGAAGGTTGTTGGCTGTGTTTATTTGTTAGTGTTTAGTAACGATTTTCCTTCTGTTCTTCACTCGGATGATGCAATCCTTGTAAAATATGCTGGTATCTAGTTCTTTTAAAGGTTTAAGACCTGGAAGATTAACAATTGGTTTTTGGTTTTAGAGTCTTGATGTTGAAATCAACTTTTGTTCATATGACATCAGGGTTTTATACTGATAAATGTTTGTGTTTCCGTGAGACAGTGGCAATATCTAAGAGTTAATCCATAAAACTGGATGTCCATCTTAGTTGTAATTTCTCTTGCTTCTAGCCATATTTGGCATGTACACCATGAGTGGCAAAACATATTTTGGTGCTAATCTTATTGTATGTTTCTGCATAGGAATGGATGTAGAATGCTTGGGTACAAAGGTGGCATAATCTCTTAGTGTTAGACAACATATTTGCAGATTAATTAATCTGGTCATGTTGCTCAGTTGATCCCTTTTAGACTTGTTCTGTCAGTTCATCGGTGTCCGTGATCTTGTGCATTCTAACTGCATAGGTGTATTAGAGGAACTTATGGCCACAAGATATGTACGTTTCTCTTAAAATTTGTCAAAAACTTGACTAGAGCTTCAATAAGCATTCTATTGATAGTCTTGTGTCAACTCTGGCACAGATTTAATTATCTATGGCTATTGTACTGCCTGTTTAAGTTTATGAAAGGGTTTTATGTTAGTTATTCGTTTTCCTAGTTATTCATTTTCCTCGAGAAAAGCAAAATGGATTTAGTGCAGATACCCTATCCTTATGTTCTTTATGTATCTCAATTTAAATACCTTTTAGCCATTACCCAGATCTCACTTTATTCTGTACACTAACTTCCCATTCTATTTGCAGGTTCTTCTTTGCCTCTGGATTGCATACTCCGCAAAGTTGAAGTTATTCAGCTCAGTTTCTGTTGATTGTTGAATAAAGTTATTCAAGTTAGCAGTTGCCTAGAAGTGCTTTGTTTTTCCCCCATTGGATATGGTAATTTTTTGCCTATCAGACGTTATATTTTTTTTTTCGGTGTGATTCTAGAAATCGATATGCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGTGGAGGTATTCTTGTTGAATGAAGTTATTGGATTTAGCAGTTGCATACCCGTGCTTTGTTTTCCCCCATTGGATACGGTATTGGTATGTGCCACTCCCCCTCCCAGGTGAGGTATTCTTATGTAGATATTTGCCTGAGCACGAAGTCTTTTTGGGAGGGTTAAGGGAACCTTATGCTTAGAGTTGAGAGATCATGCTTCCAGAGATTTAGAGCTCTGTATTTTACTCTTTGAATGAATAGGCATTCCCTTTATCTTTGGTTTCAGTGGTCGCATGAGTAGGAGCAATAATTAGGATGTATATTTTTCACATCTTTATCCCTTCGTTTGGATGCTTAGTTGTATGACTTGTTTTGATGTAGAATGCGTCGAATTAAGATAGTCATGCCATGATGCTTAAATGTTTTTATTTTGACATTCTAGATCATATCACATGAAAAATAGTTTCTCATTTCATCTAATGATATTCCCTATTAACGGTGCATTTCTTTCAATTTGTTTCAGGCCACCAATGAAAATCTTCCACCGAATGTTATAAAGCAATTGGCAAAAGAGTTGAAGAGCCTCGACGAATCCCCTCCTGAAGGCATAAAAGTAGGCGTCAACGATGATGACTTCTCGACAATATATGCTGACATTGAAGGCCCAGGCATGTCATTTATCACTCCATCACTGAAATTTATCTCTTTGAGCTGGAGTTTACTCTTATTACTGAATTATGATTGTTGCCATTGCAGTGGGAACTCCCTATGAGAATGGCCTCTTCCGTATGAAGTTGATATTGTCTCGTGACTTCCCGTGTTCTCCTCCCAAAGGTTTGCTCTGATAATGATAGGATTAAATTTATGACATTAAACGGCTGTTGGCCTATAGTTGCAAATCCAGATCGGCTAATTGTTCTTGTATAGCACCTGCTCCAATAGAAATTTCTCAAATTCGAAATGTATTGAACCCTGGGTAGTAAAAAAAAAAGTGGGATGCTGTATTTTCAGGATTGGATTTCATATTCGAATGAACCCTGCAGTTGTTCATCTTGTGTATAAGATTTATCCGAGGATTTAGTTTATATAATTAGTTGATAAATTAAAAGAAATTTTCTCCACTTGGGGAAGTTCTTCCATCTTGATCTCCGCAATGGCATCTATCTCTTTAACTTTTTTTATTCTTTGTAGGTTACTTCCTTACTAAGATCTTTCATCCAAACATTGCAACCAATGGAGAGATTTGTGTCAACACTTTGAAGAAAGATTGGAATCCAAGCCTTGGGCTGCGGCATGTCCTAATTGTAAAATCTCTTTCTTTCCTGATATTATCTTAATTGGTTGAAGAGATCAGTTTTAAAAATCCCTTAATATATTTGATTTCATTGTGAGAGCTTTTGTTTCCGAATCTCTGTAATGATAGGTGTTTTGTGGAACAGGTTGTTAGATGTCTACTGATTGAACCATTTCCAGAATCAGCTTTGAATGAACAAGCTGGCAAGATGCTGCTTGAAAATTATGATGAATATGCCAGACATGCCAGGTGAGTCAGGCCCCCCCCCCCCTTCCAAATTATCTGTTTTTTGTTGGCTTATTTGAAATGTTGGAATGGTTAATGTTTCTTTAGATAGACCTCTGTCGATTTTATTGGTGTCGACCCAAAATCACTACTTAATCTATAAGAGTGAGCTCAGGTCGACTTTTGAAAGAGTGAAAAGTCCTTTCTAAGTATTCACGACGTTGGGTTGTACAACCAAAAGTAAGTTTGAAAGCTGTAAAAGTTTGGAAAACATACGTTCTTTTCCTACTCGTATCGAATAGAACACGCTGAGCCAAATCTTCTTCATGTAAAATCTGCTTTATTTAGATGGGGAAAATCGTATAGTTTTATAAAACTGTGTGCTATGGCTCGAATCCATAGTCAATCCTATTTACGATAGGAGCAGTTGACAATTGAATCCAATTTTGTCCATTGGTTATGTTTTCTAAATGTAACGGTCCAGATTCACTGCTAGCAGATATTGTTCTCTTTGGGCTTTCCCTTCCGGGCTTTCCCTCAAGGCTTTAAAACGCGTATGCTAGGGGAAGGTTTCCACACAAATGGTGGTTTGTTCTCCTCCCCAACCAATGTGGGACATCACAGTCCCACCCCCCTTTGGGGCCCAGCATCCTTGCTGGCACTCTTTCCTTCCTCCAATTGATGTGGAACCGCCCCCAAATCTCACCCCCCTTTGGGGCCCAGCATCTTTATTGGCACATCGCCTTGTGTCTACTCCCCTTCGGGGAACAGTGAGAAGGCTGGCACATCGTTCGGTGTCTGACTCTGATACCATTTGTAATAGCCCAGATCCACCGTTAGCAGATAGTGTCCTCTTTAGGCTTTCCCTTTCGGGCTTTCCCTCTCAAGGCTTTAAAACGTGTGTGCTAGGGAAGGTTTCCACACCCTTATACATAGTAGTTTGTTCTCCTCCCCAACCAACGTGGACTTGGAAAGTCATCCCAAATTCGCCGGAACTGTCGTATCCATGCTTGTGTCTTCATCTCCATTGCTCTGTTCTATCAGTCCTAAAGAAATTTATTTCCTAGTAAAAATAGTATCTGCATCTTTTCAAAGATGATGATGATATAGTCATCAAGCTCGAGACATGTAGCGAACTTTCTGCTTGCTTTTTGCCAGGCTCTATACTGGAATCCATGCAAAGCCAAAACCGAAGTTCAAGTCGGGAGCCATCTCCGAGTCAACAACTGCGCTAAATGTCGACCCAACAAATGCGTCTGCGCTTAATACAGATCTCAAAAACACATCTGCTGCTGTACTGTCATCGGCATGTCCAACTGCAAATTCTAATACCGCAGTTAGAGGTGGGCAGGAGCAGCAGCCAAACATTACAGCACCACCACCAGCCTTAGAGTCGGGAGTCGGGGGCTCCGGCGTGGCTGCACCAGCAGCAGCAGTGGTGAAAAAACAAGATGGACCCTTGAAGATGCAGGGTGACAAGAAGAAAATAGATGCAAGAAAGAAAAGCTTGAAGAGATTGTGATGTTTTAATGGATTGAATGAATGAATTTAACTGTCTATTAATGCCAGAATTTAAGGTTAGCTCTCTTTCTTGTTCGATAACACAGCAGAGCACTTAGAGGAGAGAATTGAGAACTGAAAGTTAAAAATGCTGTGGAATTTGTAATGAAGAACACACTTGAATCACTGATGTAG

mRNA sequence

ATGACAACTTTGCTCTTTAACGATTTTCCTTCTGTTCTTCACTCGGATGATGCAATCCTTGTAAAATATGCTGGTTCTTCTTTGCCTCTGGATTGCATACTCCGCAAAGTTGAAGCCACCAATGAAAATCTTCCACCGAATGTTATAAAGCAATTGGCAAAAGAGTTGAAGAGCCTCGACGAATCCCCTCCTGAAGGCATAAAAGTAGGCGTCAACGATGATGACTTCTCGACAATATATGCTGACATTGAAGGCCCAGGCATGTCATTTATCACTCCATCACTGAAATTTATCTCTTTGAGCTGGATGGGAACTCCCTATGAGAATGGCCTCTTCCGTATGAAGTTGATATTGTCTCGTGACTTCCCGTGTTCTCCTCCCAAAGGTTACTTCCTTACTAAGATCTTTCATCCAAACATTGCAACCAATGGAGAGATTTGTGTCAACACTTTGAAGAAAGATTGGAATCCAAGCCTTGGGCTGCGGCATGTCCTAATTGTTGTTAGATGTCTACTGATTGAACCATTTCCAGAATCAGCTTTGAATGAACAAGCTGGCAAGATGCTGCTTGAAAATTATGATGAATATGCCAGACATGCCAGGCTCTATACTGGAATCCATGCAAAGCCAAAACCGAAGTTCAAGTCGGGAGCCATCTCCGAGTCAACAACTGCGCTAAATGTCGACCCAACAAATGCGTCTGCGCTTAATACAGATCTCAAAAACACATCTGCTGCTGTACTGTCATCGGCATGTCCAACTGCAAATTCTAATACCGCAGTTAGAGGTGGGCAGGAGCAGCAGCCAAACATTACAGCACCACCACCAGCCTTAGAGTCGGGAGTCGGGGGCTCCGGCGTGGCTGCACCAGCAGCAGCAGTGGTGAAAAAACAAGATGGACCCTTGAAGATGCAGGGTGACAAGAAGAAAATAGATGCAAGAAAGAAAAGCTTGAAGAGATTGTGATGTTTTAATGGATTGAATGAATGAATTTAACTGTCTATTAATGCCAGAATTTAAGGTTAGAGCAGAGCACTTAGAGGAGAGAATTGAGAACTGAAAGTTAAAAATGCTGTGGAATTTGTAATGAAGAACACACTTGAATCACTGATGTAG

Coding sequence (CDS)

ATGACAACTTTGCTCTTTAACGATTTTCCTTCTGTTCTTCACTCGGATGATGCAATCCTTGTAAAATATGCTGGTTCTTCTTTGCCTCTGGATTGCATACTCCGCAAAGTTGAAGCCACCAATGAAAATCTTCCACCGAATGTTATAAAGCAATTGGCAAAAGAGTTGAAGAGCCTCGACGAATCCCCTCCTGAAGGCATAAAAGTAGGCGTCAACGATGATGACTTCTCGACAATATATGCTGACATTGAAGGCCCAGGCATGTCATTTATCACTCCATCACTGAAATTTATCTCTTTGAGCTGGATGGGAACTCCCTATGAGAATGGCCTCTTCCGTATGAAGTTGATATTGTCTCGTGACTTCCCGTGTTCTCCTCCCAAAGGTTACTTCCTTACTAAGATCTTTCATCCAAACATTGCAACCAATGGAGAGATTTGTGTCAACACTTTGAAGAAAGATTGGAATCCAAGCCTTGGGCTGCGGCATGTCCTAATTGTTGTTAGATGTCTACTGATTGAACCATTTCCAGAATCAGCTTTGAATGAACAAGCTGGCAAGATGCTGCTTGAAAATTATGATGAATATGCCAGACATGCCAGGCTCTATACTGGAATCCATGCAAAGCCAAAACCGAAGTTCAAGTCGGGAGCCATCTCCGAGTCAACAACTGCGCTAAATGTCGACCCAACAAATGCGTCTGCGCTTAATACAGATCTCAAAAACACATCTGCTGCTGTACTGTCATCGGCATGTCCAACTGCAAATTCTAATACCGCAGTTAGAGGTGGGCAGGAGCAGCAGCCAAACATTACAGCACCACCACCAGCCTTAGAGTCGGGAGTCGGGGGCTCCGGCGTGGCTGCACCAGCAGCAGCAGTGGTGAAAAAACAAGATGGACCCTTGAAGATGCAGGGTGACAAGAAGAAAATAGATGCAAGAAAGAAAAGCTTGAAGAGATTGTGA

Protein sequence

MTTLLFNDFPSVLHSDDAILVKYAGSSLPLDCILRKVEATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKFISLSWMGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGAISESTTALNVDPTNASALNTDLKNTSAAVLSSACPTANSNTAVRGGQEQQPNITAPPPALESGVGGSGVAAPAAAVVKKQDGPLKMQGDKKKIDARKKSLKRL

Homology

[Close]

BLAST of Carg13336 vs. NCBI nr
Match: XP_023518784.1 (ubiquitin-conjugating enzyme E2 22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 488.8 bits (1257), Expect = 1.4e-134
Identity = 258/286 (90.21%), Postives = 260/286 (90.91%), Query Frame = 0


Query: 39  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKFI 98
           ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP            
Sbjct: 2   ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP------------ 61

Query: 99  SLSWMGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS 158
               +GTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS
Sbjct: 62  ----VGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS 121

Query: 159 LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGA 218
           LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGA
Sbjct: 122 LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGA 181

Query: 219 ISESTTALNVDPTNASALNTDLKNTSAAVLSSACPTANSNTAVRGGQEQQPNITAPPPAL 278
           ISESTTALNVDPTNASALNTDLKNTSAAVLSSACPTANSNTAVRGGQEQQPNITA PPAL
Sbjct: 182 ISESTTALNVDPTNASALNTDLKNTSAAVLSSACPTANSNTAVRGGQEQQPNITA-PPAL 241

Query: 279 ESGVGGSGVAAP---AAAVVKKQDGPLKMQGDKKKIDARKKSLKRL 322
           ESGVG SG+AAP        KKQDGPLKMQGDKKKIDARKKSLKRL
Sbjct: 242 ESGVGVSGMAAPXXXXXXXXKKQDGPLKMQGDKKKIDARKKSLKRL 270

[Close]

BLAST of Carg13336 vs. NCBI nr
Match: XP_022967884.1 (ubiquitin-conjugating enzyme E2 22-like [Cucurbita maxima])

HSP 1 Score: 456.1 bits (1172), Expect = 1.0e-124
Identity = 241/284 (84.86%), Postives = 247/284 (86.97%), Query Frame = 0


Query: 39  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKFI 98
           ATNENLPP VIKQLAKELKSLDE PPEGIKVGVNDDDFSTIYADIEGP            
Sbjct: 2   ATNENLPPKVIKQLAKELKSLDEFPPEGIKVGVNDDDFSTIYADIEGP------------ 61

Query: 99  SLSWMGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS 158
               +GTPYENGLFRMKLILS DFP SPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS
Sbjct: 62  ----VGTPYENGLFRMKLILSHDFPYSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS 121

Query: 159 LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGA 218
           LGLRHVL VVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFK+ A
Sbjct: 122 LGLRHVLTVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTRA 181

Query: 219 ISESTTALNVDPTNASALNTDLKNTSAAVLSSACPTANSNTAVRGGQE-QQPNITAPPPA 278
           ISESTTALNVDP+NASAL TDLKN+SAA L  ACPTA SNTAVRGGQE QQPN+TAP  A
Sbjct: 182 ISESTTALNVDPSNASALTTDLKNSSAAALPLACPTAQSNTAVRGGQEQQQPNVTAPAAA 241

Query: 279 LESGVGGSGVAAPAAAVVKKQDGPLKMQGDKKKIDARKKSLKRL 322
            E GVGGSGVAAPAA V K+  GPLKMQ DKKKIDARKKSLKRL
Sbjct: 242 SELGVGGSGVAAPAAVVKKEAAGPLKMQADKKKIDARKKSLKRL 269

[Close]

BLAST of Carg13336 vs. NCBI nr
Match: XP_023543482.1 (ubiquitin-conjugating enzyme E2 22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451.8 bits (1161), Expect = 1.9e-123
Identity = 238/284 (83.80%), Postives = 245/284 (86.27%), Query Frame = 0


Query: 39  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKFI 98
           ATNENLPP VIKQLAKELKSLDESPPEGIKVGVNDDDFSTI+ADIEGP            
Sbjct: 2   ATNENLPPKVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGP------------ 61

Query: 99  SLSWMGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS 158
               +GTPYENGLFRMKLILS DFP SPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS
Sbjct: 62  ----VGTPYENGLFRMKLILSHDFPYSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS 121

Query: 159 LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGA 218
           LGLRHVL VVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFK+ A
Sbjct: 122 LGLRHVLTVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTRA 181

Query: 219 ISESTTALNVDPTNASALNTDLKNTSAAVLSSACPTANSNTAVRGGQE-QQPNITAPPPA 278
           ISESTTALNVDP+NAS LNTDLKN+SAA L  ACPT  SNTAVRG QE QQPN+TAP  A
Sbjct: 182 ISESTTALNVDPSNASTLNTDLKNSSAAALPLACPTTQSNTAVRGDQEQQQPNVTAPAAA 241

Query: 279 LESGVGGSGVAAPAAAVVKKQDGPLKMQGDKKKIDARKKSLKRL 322
            E GVGGSGVAAPAA   K+  GPLKMQ DKKKIDARKKSLKRL
Sbjct: 242 SELGVGGSGVAAPAAVAKKEAAGPLKMQADKKKIDARKKSLKRL 269

[Close]

BLAST of Carg13336 vs. NCBI nr
Match: XP_022950458.1 (ubiquitin-conjugating enzyme E2 22-like [Cucurbita moschata])

HSP 1 Score: 450.7 bits (1158), Expect = 4.3e-123
Identity = 238/284 (83.80%), Postives = 245/284 (86.27%), Query Frame = 0


Query: 39  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKFI 98
           ATNENLPP VIKQLAKELKSLDESPPEGIKVGVNDDDFSTI+ADIEGP            
Sbjct: 2   ATNENLPPKVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGP------------ 61

Query: 99  SLSWMGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS 158
               +GTPYENGLFRMKLILS DFP SPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS
Sbjct: 62  ----VGTPYENGLFRMKLILSHDFPYSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS 121

Query: 159 LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGA 218
           LGLRHVL VVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFK+ A
Sbjct: 122 LGLRHVLTVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTRA 181

Query: 219 ISESTTALNVDPTNASALNTDLKNTSAAVLSSACPTANSNTAVRGGQE-QQPNITAPPPA 278
           ISESTTALNVDP+NASALNTDLKN+S A    ACPTA SNTAVRG QE QQPN+TAP  A
Sbjct: 182 ISESTTALNVDPSNASALNTDLKNSSTAAHPLACPTAQSNTAVRGDQEQQQPNVTAPAAA 241

Query: 279 LESGVGGSGVAAPAAAVVKKQDGPLKMQGDKKKIDARKKSLKRL 322
            E GVGGSGVAAPAA   K+  GPLKMQ DKKKIDARKKSLKRL
Sbjct: 242 SELGVGGSGVAAPAAVAKKEAAGPLKMQADKKKIDARKKSLKRL 269

[Close]

BLAST of Carg13336 vs. NCBI nr
Match: XP_022925072.1 (ubiquitin-conjugating enzyme E2 22-like [Cucurbita moschata])

HSP 1 Score: 429.9 bits (1104), Expect = 7.8e-117
Identity = 231/283 (81.63%), Postives = 232/283 (81.98%), Query Frame = 0


Query: 39  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKFI 98
           ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP            
Sbjct: 2   ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGP------------ 61

Query: 99  SLSWMGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS 158
               +GTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS
Sbjct: 62  ----VGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS 121

Query: 159 LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGA 218
           LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGA
Sbjct: 122 LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGA 181

Query: 219 ISESTTALNVDPTNASALNTDLKNTSAAVLSSACPTANSNTAVRGGQEQQPNITAPPPAL 278
           ISESTTALNVDPTNASALNTDLKNTSAAVLSSACPTANSNTAVR                
Sbjct: 182 ISESTTALNVDPTNASALNTDLKNTSAAVLSSACPTANSNTAVR-XXXXXXXXXXXXXXX 241

Query: 279 ESGVGGSGVAAPAAAVVKKQDGPLKMQGDKKKIDARKKSLKRL 322
                              QDGPLKMQGDKKKIDARKKSLKRL
Sbjct: 242 XXXXXXXXXXXXXXXXXXXQDGPLKMQGDKKKIDARKKSLKRL 267

[Close]

BLAST of Carg13336 vs. TAIR10
Match: AT5G05080.1 (ubiquitin-conjugating enzyme 22)

HSP 1 Score: 330.9 bits (847), Expect = 8.9e-91
Identity = 185/283 (65.37%), Postives = 203/283 (71.73%), Query Frame = 0


Query: 39  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKFI 98
           A+NENLPPNVIKQLAKELKSLDESPP+GIKV VND+DFS I ADIEGP            
Sbjct: 2   ASNENLPPNVIKQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGP------------ 61

Query: 99  SLSWMGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS 158
               +GTPYENGLFRMKL LS DFP SPPKGYF+TKIFHPN+A+NGEICVNTLKKDWNPS
Sbjct: 62  ----VGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPS 121

Query: 159 LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGA 218
           LGLRHVL VVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFK+GA
Sbjct: 122 LGLRHVLSVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGA 181

Query: 219 ISESTTALNVDPTNASALNTDLKNTSAAVLSSACPTANSNTAVRGGQEQQPNITAPPPAL 278
           ISESTTALNV  T     N +    + A+ SS        T+    Q+QQ          
Sbjct: 182 ISESTTALNVGQT-----NNETPGAATAIPSSMTDIKRVTTS---AQDQQH--------- 241

Query: 279 ESGVGGSGVAAPAAAVVKKQDGPLKMQGDKKKIDARKKSLKRL 322
            +                ++ G  K+Q DKKK+DARKKSLKRL
Sbjct: 242 VAXXXXXXXXXXXXXXXXREAGLAKVQADKKKVDARKKSLKRL 251

[Close]

BLAST of Carg13336 vs. TAIR10
Match: AT1G16890.3 (ubiquitin-conjugating enzyme 36)

HSP 1 Score: 99.4 bits (246), Expect = 4.4e-21
Identity = 59/175 (33.71%), Postives = 88/175 (50.29%), Query Frame = 0


Query: 41  NENLPPNVIKQLAKELK-------SLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITP 100
           N NLP  +IK+  + L        S D SP  GI    ++++       I GP  S    
Sbjct: 3   NSNLPRRIIKETQRLLSEPGNFITSFDPSP--GISASPSEENMRYFNVMILGPTQS---- 62

Query: 101 SLKFISLSWMGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKK 160
                       PYE G+F+++L L  ++P + PK  FLTKI+HPNI   G IC++ LK 
Sbjct: 63  ------------PYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKD 122

Query: 161 DWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHA 209
            W+P+L +R VL+ ++ LL  P P+  L+E   K    N  E    A+ +T ++A
Sbjct: 123 KWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYA 159

[Close]

BLAST of Carg13336 vs. TAIR10
Match: AT4G27960.2 (ubiquitin conjugating enzyme 9)

HSP 1 Score: 99.0 bits (245), Expect = 5.7e-21
Identity = 54/159 (33.96%), Postives = 80/159 (50.31%), Query Frame = 0


Query: 50  KQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKFISLSWMGTPYEN 109
           K++ KELK L + PP     G   +D     A I GP  S                PY  
Sbjct: 34  KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDS----------------PYSG 93

Query: 110 GLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVR 169
           G+F + +    D+P  PPK  F TK+FHPNI +NG IC++ LK+ W+P+L +  VL+ + 
Sbjct: 94  GVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSIC 153

Query: 170 CLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHA 209
            LL +P P+  L  +   M   + ++Y   AR +T  +A
Sbjct: 154 SLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYA 176

[Close]

BLAST of Carg13336 vs. TAIR10
Match: AT5G53300.1 (ubiquitin-conjugating enzyme 10)

HSP 1 Score: 98.6 bits (244), Expect = 7.4e-21
Identity = 54/159 (33.96%), Postives = 80/159 (50.31%), Query Frame = 0


Query: 50  KQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKFISLSWMGTPYEN 109
           K++ KELK L + PP     G   +D     A I GP  S                PY  
Sbjct: 4   KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSES----------------PYAG 63

Query: 110 GLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVR 169
           G+F + +    D+P  PPK  F TK+FHPNI +NG IC++ LK+ W+P+L +  VL+ + 
Sbjct: 64  GVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSIC 123

Query: 170 CLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHA 209
            LL +P P+  L  +   M   + ++Y   AR +T  +A
Sbjct: 124 SLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYA 146

[Close]

BLAST of Carg13336 vs. TAIR10
Match: AT2G02760.1 (ubiquiting-conjugating enzyme 2)

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-20
Identity = 49/152 (32.24%), Postives = 77/152 (50.66%), Query Frame = 0


Query: 50  KQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKFISLSWMGTPYEN 109
           K+L ++ K L + PP GI     D++     A I GP                  TP++ 
Sbjct: 7   KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPD----------------DTPWDG 66

Query: 110 GLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVR 169
           G F++ L  S D+P  PP   F++++FHPNI  +G IC++ L+  W+P   +  +L  ++
Sbjct: 67  GTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 126

Query: 170 CLLIEPFPESALNEQAGKMLLENYDEYARHAR 202
            LL +P P S  N +A +M  E+  EY R  R
Sbjct: 127 SLLCDPNPNSPANSEAARMFSESKREYNRRVR 142

[Close]

BLAST of Carg13336 vs. Swiss-Prot
Match: sp|Q9FF66|UBC22_ARATH (Ubiquitin-conjugating enzyme E2 22 OS=Arabidopsis thaliana OX=3702 GN=UBC22 PE=1 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 1.6e-89
Identity = 185/283 (65.37%), Postives = 203/283 (71.73%), Query Frame = 0


Query: 39  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKFI 98
           A+NENLPPNVIKQLAKELKSLDESPP+GIKV VND+DFS I ADIEGP            
Sbjct: 2   ASNENLPPNVIKQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGP------------ 61

Query: 99  SLSWMGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS 158
               +GTPYENGLFRMKL LS DFP SPPKGYF+TKIFHPN+A+NGEICVNTLKKDWNPS
Sbjct: 62  ----VGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPS 121

Query: 159 LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGA 218
           LGLRHVL VVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFK+GA
Sbjct: 122 LGLRHVLSVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGA 181

Query: 219 ISESTTALNVDPTNASALNTDLKNTSAAVLSSACPTANSNTAVRGGQEQQPNITAPPPAL 278
           ISESTTALNV  T     N +    + A+ SS        T+    Q+QQ          
Sbjct: 182 ISESTTALNVGQT-----NNETPGAATAIPSSMTDIKRVTTS---AQDQQH--------- 241

Query: 279 ESGVGGSGVAAPAAAVVKKQDGPLKMQGDKKKIDARKKSLKRL 322
            +                ++ G  K+Q DKKK+DARKKSLKRL
Sbjct: 242 VAXXXXXXXXXXXXXXXXREAGLAKVQADKKKVDARKKSLKRL 251

[Close]

BLAST of Carg13336 vs. Swiss-Prot
Match: sp|Q28F89|UBE2S_XENTR (Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropicalis OX=8364 GN=ube2s PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 7.5e-55
Identity = 99/168 (58.93%), Postives = 125/168 (74.40%), Query Frame = 0


Query: 42  ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKFISLS 101
           ENLPP++I+Q+ KE+ +L   PPEGIK+  N++D + +  +IEGP               
Sbjct: 6   ENLPPHIIRQVYKEVSTLTSDPPEGIKIIPNEEDITDVQVNIEGP--------------- 65

Query: 102 WMGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGL 161
             GTPY  G+FRMKLIL +DFP +PPKGYFLTKIFHPN++TNGEICVN LKKDW   LG+
Sbjct: 66  -EGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSTNGEICVNVLKKDWKAELGI 125

Query: 162 RHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAK 210
           RHVL+ ++CLLI P PESALNE+AG++LLENY+EYA  ARL T IHA+
Sbjct: 126 RHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTEIHAQ 157

[Close]

BLAST of Carg13336 vs. Swiss-Prot
Match: sp|A7SE05|UBE2S_NEMVE (Ubiquitin-conjugating enzyme E2 S OS=Nematostella vectensis OX=45351 GN=v1g237158 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.2e-54
Identity = 98/168 (58.33%), Postives = 124/168 (73.81%), Query Frame = 0


Query: 42  ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKFISLS 101
           EN  P +IKQ+A+E+  L   PPEGIKV  ND+D + I A IEGP               
Sbjct: 9   ENFSPQIIKQVAREIHGLTNDPPEGIKVFSNDEDITDIQASIEGP--------------- 68

Query: 102 WMGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGL 161
             GTPYE G+F++KL+L +DFP +PPKG+FLTKIFHPN+A NGEICVNTLKKDW P LG+
Sbjct: 69  -TGTPYEGGIFKIKLVLGKDFPAAPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKPDLGI 128

Query: 162 RHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAK 210
           + VL+ V+CLLI P PESALNE+AGK+LLE YD+Y++ A+++T IHAK
Sbjct: 129 KQVLLTVKCLLIVPNPESALNEEAGKLLLERYDDYSKRAKMFTEIHAK 160

[Close]

BLAST of Carg13336 vs. Swiss-Prot
Match: sp|C1C3R6|UBE2S_LITCT (Ubiquitin-conjugating enzyme E2 S OS=Lithobates catesbeiana OX=8400 GN=ube2s PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.7e-54
Identity = 99/167 (59.28%), Postives = 123/167 (73.65%), Query Frame = 0


Query: 42  ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKFISLS 101
           ENLPP+VI+Q+ KE+ +L   PPEGIK+  N++D + +   IEGP               
Sbjct: 6   ENLPPHVIRQVYKEVSTLTPDPPEGIKIIPNEEDITDVQVSIEGP--------------- 65

Query: 102 WMGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGL 161
             GTPY  G+FRMKLIL +DFP +PPKGYFLTKIFHPN+++NGEICVN LKKDW   LG+
Sbjct: 66  -EGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSSNGEICVNVLKKDWKAELGI 125

Query: 162 RHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHA 209
           RHVL+ ++CLLI P PESALNE+AG++LLENY+EYA  ARL T IHA
Sbjct: 126 RHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTEIHA 156

[Close]

BLAST of Carg13336 vs. Swiss-Prot
Match: sp|B4JKB7|UBE2S_DROGR (Ubiquitin-conjugating enzyme E2 S OS=Drosophila grimshawi OX=7222 GN=GH12079 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.1e-53
Identity = 98/169 (57.99%), Postives = 126/169 (74.56%), Query Frame = 0


Query: 42  ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKFISLS 101
           ENL P  I+Q+ KEL+ ++ +PPEGIKV +N+ D + I A I+GP               
Sbjct: 9   ENLSPQTIRQVMKELQDMESTPPEGIKVLINESDVTDIQALIDGPA-------------- 68

Query: 102 WMGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGL 161
             GTPY  G+FR+KL LS+DFP +PPK YFLTKIFHPN+A+NGEICVNTLKKDW P LG+
Sbjct: 69  --GTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVASNGEICVNTLKKDWKPDLGI 128

Query: 162 RHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKP 211
           +H+L+ ++CLLI P PESALNE+AGKMLLE YD+Y++ AR+ T IHA+P
Sbjct: 129 KHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQP 161

[Close]

BLAST of Carg13336 vs. TrEMBL
Match: tr|A0A1S3CLW5|A0A1S3CLW5_CUCME (ubiquitin-conjugating enzyme E2 22 OS=Cucumis melo OX=3656 GN=LOC103502453 PE=3 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.0e-112
Identity = 225/284 (79.23%), Postives = 229/284 (80.63%), Query Frame = 0


Query: 39  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKFI 98
           ATNENLPPNVIKQLAKELKSLDESPPEGIKV VNDDDFSTI+ADIEGP            
Sbjct: 2   ATNENLPPNVIKQLAKELKSLDESPPEGIKVVVNDDDFSTIFADIEGP------------ 61

Query: 99  SLSWMGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS 158
               +GTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS
Sbjct: 62  ----VGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS 121

Query: 159 LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGA 218
           LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFK+GA
Sbjct: 122 LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGA 181

Query: 219 ISESTTALNVDPTNASALNTDLKNTSAAVLSSACPTANSNTAVRGGQEQQPNITAPPPAL 278
           ISESTTALNVDPTNA                 ACPTANS TAVR GQEQQ        A 
Sbjct: 182 ISESTTALNVDPTNAXXXXXXXXXXXXXXXXLACPTANSTTAVRSGQEQQQPNVVTALAS 241

Query: 279 ESGVGGSGVAAPAAAVVKKQDGPLKMQG-DKKKIDARKKSLKRL 322
           ESGVG SGV    AA VKK+ G LKMQ  DKKKIDARKKSLKRL
Sbjct: 242 ESGVGVSGVGVAPAATVKKESGHLKMQQVDKKKIDARKKSLKRL 269

[Close]

BLAST of Carg13336 vs. TrEMBL
Match: tr|A0A0A0L0F5|A0A0A0L0F5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G340550 PE=3 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 3.7e-107
Identity = 217/284 (76.41%), Postives = 222/284 (78.17%), Query Frame = 0


Query: 39  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKFI 98
           ATNENLPPNVIKQLAKELKSLDESPPEGIKV VNDDDFSTI+ADIEGP            
Sbjct: 2   ATNENLPPNVIKQLAKELKSLDESPPEGIKVVVNDDDFSTIFADIEGP------------ 61

Query: 99  SLSWMGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS 158
               +GTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS
Sbjct: 62  ----VGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS 121

Query: 159 LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGA 218
           LGLRHVL VVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFK+GA
Sbjct: 122 LGLRHVLTVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGA 181

Query: 219 ISESTTALNVDPTNASALNTDLKNTSAAVLSSACPTANSNTAVRGGQEQQPNITAPPPAL 278
           ISESTTALNVDPTN                       NS T VR GQEQQ        A 
Sbjct: 182 ISESTTALNVDPTNXXXXXXXXXXXXXXXXXXXXXXXNSITVVRSGQEQQQPNVVTALAS 241

Query: 279 ESGVGGSGVAAPAAAVVKKQDGPLKMQG-DKKKIDARKKSLKRL 322
           ESGVGGSGV    AA+VKK+ G LKMQ   KKKIDARKKSLKRL
Sbjct: 242 ESGVGGSGVGEAPAAMVKKESGHLKMQQVGKKKIDARKKSLKRL 269

[Close]

BLAST of Carg13336 vs. TrEMBL
Match: tr|A0A2C9WG70|A0A2C9WG70_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G219500 PE=3 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 7.0e-106
Identity = 209/285 (73.33%), Postives = 230/285 (80.70%), Query Frame = 0


Query: 39  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKFI 98
           ATNENLPPNVIKQL KELK+LDESPPEGIKVGVNDDDFSTIYADIEGP            
Sbjct: 2   ATNENLPPNVIKQLVKELKNLDESPPEGIKVGVNDDDFSTIYADIEGPA----------- 61

Query: 99  SLSWMGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS 158
                GTPYE+GLFRMKL+LSRDFP SPPKGYFLTKIFHPNIA+NGEICVNTLKKDWNPS
Sbjct: 62  -----GTPYESGLFRMKLLLSRDFPHSPPKGYFLTKIFHPNIASNGEICVNTLKKDWNPS 121

Query: 159 LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGA 218
           LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENY+EYARHARLYTGIHAKPKPKFKSGA
Sbjct: 122 LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARLYTGIHAKPKPKFKSGA 181

Query: 219 ISESTTALNVDPTNASALNTDLKNTSAAVLSSACPTANSNTAVRGGQEQ-QPNITAPPPA 278
           ISESTTALN+D +N+S LNTD     +A ++   P A   TA +GG  Q QP +  P P 
Sbjct: 182 ISESTTALNIDQSNSSVLNTDQNTGVSAAIALPSPLAPCTTATKGGNSQDQPPLVGPVP- 241

Query: 279 LESGVGGS-GVAAPAAAVVKKQDGPLKMQGDKKKIDARKKSLKRL 322
            E+GV GS  +A P  +  KK+ GP K+Q +K+K+DARKKSLKRL
Sbjct: 242 -ETGVLGSVTMATPIISTQKKEGGPAKIQAEKRKMDARKKSLKRL 268

[Close]

BLAST of Carg13336 vs. TrEMBL
Match: tr|A0A2H5MZH8|A0A2H5MZH8_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_007140 PE=3 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 5.0e-104
Identity = 213/289 (73.70%), Postives = 227/289 (78.55%), Query Frame = 0


Query: 38  EATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKF 97
           +ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTI+ADIEGP           
Sbjct: 5   QATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPA---------- 64

Query: 98  ISLSWMGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNP 157
                 GTPYENG+FRMKL+LS DFP SPPKGYFLTKIFHPNIATNGEICVNTLKKDWNP
Sbjct: 65  ------GTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNP 124

Query: 158 SLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSG 217
           SLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENY+EYARHAR+YTGIHAKPKPKFKSG
Sbjct: 125 SLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKPKPKFKSG 184

Query: 218 AISESTTALNVDPTNASALNTDLKNTS----AAVLSSACPTANSNTAVRGGQEQ-QPNIT 277
           AISESTTALNVD T     N D KN +    A  L  A P A S TA RGG  Q QP  +
Sbjct: 185 AISESTTALNVDQT---ITNMDQKNNTPSGGAIPLPLAQPLAPSATATRGGNNQDQP--S 244

Query: 278 APPPALESGVGGSGVAAPAAAVVKKQDGPLKMQGDKKKIDARKKSLKRL 322
           A  P +E G+GGS     +A   KK+ G  K+Q D+KKIDARKKSLKRL
Sbjct: 245 AAVPTVEIGIGGSATTPASATTQKKEVGLAKVQADRKKIDARKKSLKRL 272

[Close]

BLAST of Carg13336 vs. TrEMBL
Match: tr|V4T2G0|V4T2G0_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10012469mg PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.9e-103
Identity = 211/287 (73.52%), Postives = 223/287 (77.70%), Query Frame = 0


Query: 39  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGMSFITPSLKFI 98
           ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTI+ADIEGP            
Sbjct: 2   ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPA----------- 61

Query: 99  SLSWMGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS 158
                GTPYENG+FRMKL+LS DFP SPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS
Sbjct: 62  -----GTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPS 121

Query: 159 LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGA 218
           LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENY+EYARHAR+YTGIHAKPKPKFKSGA
Sbjct: 122 LGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKPKPKFKSGA 181

Query: 219 ISESTTALNVDPTNASALNTDLKNTS----AAVLSSACPTANSNTAVRGGQEQQPNITAP 278
           ISESTTALNVD T     N D KN +    A  L  A P A S TA RGG  Q    TA 
Sbjct: 182 ISESTTALNVDQT---ITNMDQKNNTPSGGAIPLPLAQPLAPSATATRGGNNQDQPATA- 241

Query: 279 PPALESGVGGSGVAAPAAAVVKKQDGPLKMQGDKKKIDARKKSLKRL 322
            P +E G+ GS     +A   KK+ G  K+Q D+KKIDARKKSLKRL
Sbjct: 242 VPTVEIGISGSATTPASATTQKKEVGLAKVQADRKKIDARKKSLKRL 268

The following BLAST results are available for this feature:

BLAST of Carg13336 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518784.1	1.4e-134	90.21	ubiquitin-conjugating enzyme E2 22-like [Cucurbita pepo subsp. pepo]	[more]
XP_022967884.1	1.0e-124	84.86	ubiquitin-conjugating enzyme E2 22-like [Cucurbita maxima]	[more]
XP_023543482.1	1.9e-123	83.80	ubiquitin-conjugating enzyme E2 22-like [Cucurbita pepo subsp. pepo]	[more]
XP_022950458.1	4.3e-123	83.80	ubiquitin-conjugating enzyme E2 22-like [Cucurbita moschata]	[more]
XP_022925072.1	7.8e-117	81.63	ubiquitin-conjugating enzyme E2 22-like [Cucurbita moschata]	[more]

BLAST of Carg13336 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G05080.1	8.9e-91	65.37	ubiquitin-conjugating enzyme 22	[more]
AT1G16890.3	4.4e-21	33.71	ubiquitin-conjugating enzyme 36	[more]
AT4G27960.2	5.7e-21	33.96	ubiquitin conjugating enzyme 9	[more]
AT5G53300.1	7.4e-21	33.96	ubiquitin-conjugating enzyme 10	[more]
AT2G02760.1	2.2e-20	32.24	ubiquiting-conjugating enzyme 2	[more]

BLAST of Carg13336 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FF66\|UBC22_ARATH	1.6e-89	65.37	Ubiquitin-conjugating enzyme E2 22 OS=Arabidopsis thaliana OX=3702 GN=UBC22 PE=1...	[more]
sp\|Q28F89\|UBE2S_XENTR	7.5e-55	58.93	Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropicalis OX=8364 GN=ube2s PE=2 SV...	[more]
sp\|A7SE05\|UBE2S_NEMVE	2.2e-54	58.33	Ubiquitin-conjugating enzyme E2 S OS=Nematostella vectensis OX=45351 GN=v1g23715...	[more]
sp\|C1C3R6\|UBE2S_LITCT	3.7e-54	59.28	Ubiquitin-conjugating enzyme E2 S OS=Lithobates catesbeiana OX=8400 GN=ube2s PE=...	[more]
sp\|B4JKB7\|UBE2S_DROGR	1.1e-53	57.99	Ubiquitin-conjugating enzyme E2 S OS=Drosophila grimshawi OX=7222 GN=GH12079 PE=...	[more]

BLAST of Carg13336 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CLW5\|A0A1S3CLW5_CUCME	1.0e-112	79.23	ubiquitin-conjugating enzyme E2 22 OS=Cucumis melo OX=3656 GN=LOC103502453 PE=3 ...	[more]
tr\|A0A0A0L0F5\|A0A0A0L0F5_CUCSA	3.7e-107	76.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G340550 PE=3 SV=1	[more]
tr\|A0A2C9WG70\|A0A2C9WG70_MANES	7.0e-106	73.33	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G219500 PE=3 SV=...	[more]
tr\|A0A2H5MZH8\|A0A2H5MZH8_CITUN	5.0e-104	73.70	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_007140 PE=3 SV=1	[more]
tr\|V4T2G0\|V4T2G0_9ROSI	1.9e-103	73.52	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10012469mg PE=3 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023313	UBQ-conjugating_AS
IPR016135	UBQ-conjugating_enzyme/RWD
IPR000608	UBQ-conjugat_E2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13336-RA	Carg13336-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 50..209 e-value: 8.0E-40 score: 148.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..321
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..274
None	No IPR available	PANTHER	PTHR44066	FAMILY NOT NAMED	coord: 39..321
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 52..203 e-value: 3.1E-31 score: 107.8
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 50..198 score: 31.432
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 49..204 e-value: 3.31523E-52 score: 169.69
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	G3DSA:3.10.110.10		coord: 36..208 e-value: 5.8E-47 score: 161.0
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	SSF54495	UBC-like	coord: 40..213
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBIQUITIN_CONJUGAT_1	coord: 136..151

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg13336	Cla012166	Watermelon (97103) v1	carwmB0581
Carg13336	ClCG04G004980	Watermelon (Charleston Gray)	carwcgB0570
Carg13336	CmaCh07G011240	Cucurbita maxima (Rimu)	carcmaB0818
Carg13336	CmaCh03G001770	Cucurbita maxima (Rimu)	carcmaB0812
Carg13336	CmoCh07G011730	Cucurbita moschata (Rifu)	carcmoB0795
Carg13336	CmoCh03G002090	Cucurbita moschata (Rifu)	carcmoB0789
Carg13336	Lsi01G017280	Bottle gourd (USVL1VR-Ls)	carlsiB527
Carg13336	Cp4.1LG19g02210	Cucurbita pepo (Zucchini)	carcpeB0830
Carg13336	Cp4.1LG10g10800	Cucurbita pepo (Zucchini)	carcpeB0827
Carg13336	Cla97C04G071520	Watermelon (97103) v2	carwmbB0610
Carg13336	Bhi03G002105	Wax gourd	carwgoB0694

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg13336	Carg23660	Silver-seed gourd	carcarB534

The following block(s) are covering this gene:

None