Carg13234 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13234
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Cysteine/Histidine-rich C1 domain family protein
Location	Cucurbita_argyrosperma_scaffold_038 : 181994 .. 183205 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCCGAGCTCACAAAGATTGTCTCCCATGTCCATCCAAACCACCCTCTAAACTATTATTCCGACCATCATGTTTACACCTGTCAGGGCTGCAAGACCTCCGGCATTGGTAACCGATTCCGATGCCATATCTGCTCCGTCGACGTCCACATCTACTGCCTCGATTGCCCACCTCAATTATCCTCCTTCCTCCACACTCACTCCCTAGCTCTCTTGCCCTGTATGGACCATCGGAGCTGCGACGTTTGTCGTGAACGCATCGAGGGCTTGTTCTACCGATGCGATAGCTGTGACTTCGATGTGCACCCACTTTGCACCCAACTCCCCGAGCAGCTCCACCATGGCATCGACAAACGCCATAAGCTCAGGCTCCACAAGCTCTCCTCTGGCCGTTGTTCTGTTTGCGAATCGGATTGTTCTTATCTCTGGGTCTACAGCTGCAATGTTTGTCGAGTCAATATCCATCCCCAATGCATCCTCAAGCCGTATGGTCCGCGCCGGAGTGAGAACCCGGCTGTCCCGCCGTCGGATTCTCGCTCAATACCATATGCGCACGAGCCGTCGGGGTTTGGCGGTTATGGTTATGCAGGAGGAGGTGGAGGTCATTCTTCCCATTGGAGATTTCCGAATGAACCTAATTCTTACGGATCTGTTCAATTTCCACACAACAATCCAGGCCATTCTTCCCGTTGGAGATTTCCAAATTTTCATTCTAGTTATCCAACTCAACCTAATTCTTACGGATCTGTTCAATTCCCACACAACAATCCAGACCATTCTTCCCATGGGAGATTTCCAAATTTTCATTCTAGTTATCCAACTCAACCTAATTCTTACGGATCTGTTCAATTCCCACACAACAATCCAGACCATTCTTCCCATGGGAGATTTCCAAATTTTCATTCTAGTTATCCAACTCAACCTAATTCTTACGGATCTGTTCAATTCCCACACAACAATCCAGGCCATTCTTCCCATGGGAGATTTCCAAATTTTCATTCTAGTTATCCAACTCAACCTAATTCTTACGGATCTGTTCAATTCCCACAGAACAATCCGTGTCCGAGGCCAATTTATGGCGGACAGACATCGTCACTGTCGCCGTCCCTCTGGGGATCGATGTTTGGGGTTACAATGATTTCTTCTTTGGTTGAAAATTTAACAGTAGGCGCTGTTACCGACTTTATTTTTGGTTCCATTGATTCCTAA

mRNA sequence

ATGGCGCCCGAGCTCACAAAGATTGTCTCCCATGTCCATCCAAACCACCCTCTAAACTATTATTCCGACCATCATGTTTACACCTGTCAGGGCTGCAAGACCTCCGGCATTGGTAACCGATTCCGATGCCATATCTGCTCCGTCGACGTCCACATCTACTGCCTCGATTGCCCACCTCAATTATCCTCCTTCCTCCACACTCACTCCCTAGCTCTCTTGCCCTGTATGGACCATCGGAGCTGCGACGTTTGTCGTGAACGCATCGAGGGCTTGTTCTACCGATGCGATAGCTGTGACTTCGATGTGCACCCACTTTGCACCCAACTCCCCGAGCAGCTCCACCATGGCATCGACAAACGCCATAAGCTCAGGCTCCACAAGCTCTCCTCTGGCCGTTGTTCTGTTTGCGAATCGGATTGTTCTTATCTCTGGGTCTACAGCTGCAATGTTTGTCGAGTCAATATCCATCCCCAATGCATCCTCAAGCCGTATGGTCCGCGCCGGAGTGAGAACCCGGCTGTCCCGCCGTCGGATTCTCGCTCAATACCATATGCGCACGAGCCGTCGGGGTTTGGCGGTTATGGTTATGCAGGAGGAGGTGGAGGTCATTCTTCCCATTGGAGATTTCCGAATGAACCTAATTCTTACGGATCTGTTCAATTTCCACACAACAATCCAGGCCATTCTTCCCGTTGGAGATTTCCAAATTTTCATTCTAGTTATCCAACTCAACCTAATTCTTACGGATCTGTTCAATTCCCACACAACAATCCAGACCATTCTTCCCATGGGAGATTTCCAAATTTTCATTCTAGTTATCCAACTCAACCTAATTCTTACGGATCTGTTCAATTCCCACACAACAATCCAGACCATTCTTCCCATGGGAGATTTCCAAATTTTCATTCTAGTTATCCAACTCAACCTAATTCTTACGGATCTGTTCAATTCCCACACAACAATCCAGGCCATTCTTCCCATGGGAGATTTCCAAATTTTCATTCTAGTTATCCAACTCAACCTAATTCTTACGGATCTGTTCAATTCCCACAGAACAATCCGTGTCCGAGGCCAATTTATGGCGGACAGACATCGTCACTGTCGCCGTCCCTCTGGGGATCGATGTTTGGGGTTACAATGATTTCTTCTTTGGTTGAAAATTTAACAGTAGGCGCTGTTACCGACTTTATTTTTGGTTCCATTGATTCCTAA

Coding sequence (CDS)

ATGGCGCCCGAGCTCACAAAGATTGTCTCCCATGTCCATCCAAACCACCCTCTAAACTATTATTCCGACCATCATGTTTACACCTGTCAGGGCTGCAAGACCTCCGGCATTGGTAACCGATTCCGATGCCATATCTGCTCCGTCGACGTCCACATCTACTGCCTCGATTGCCCACCTCAATTATCCTCCTTCCTCCACACTCACTCCCTAGCTCTCTTGCCCTGTATGGACCATCGGAGCTGCGACGTTTGTCGTGAACGCATCGAGGGCTTGTTCTACCGATGCGATAGCTGTGACTTCGATGTGCACCCACTTTGCACCCAACTCCCCGAGCAGCTCCACCATGGCATCGACAAACGCCATAAGCTCAGGCTCCACAAGCTCTCCTCTGGCCGTTGTTCTGTTTGCGAATCGGATTGTTCTTATCTCTGGGTCTACAGCTGCAATGTTTGTCGAGTCAATATCCATCCCCAATGCATCCTCAAGCCGTATGGTCCGCGCCGGAGTGAGAACCCGGCTGTCCCGCCGTCGGATTCTCGCTCAATACCATATGCGCACGAGCCGTCGGGGTTTGGCGGTTATGGTTATGCAGGAGGAGGTGGAGGTCATTCTTCCCATTGGAGATTTCCGAATGAACCTAATTCTTACGGATCTGTTCAATTTCCACACAACAATCCAGGCCATTCTTCCCGTTGGAGATTTCCAAATTTTCATTCTAGTTATCCAACTCAACCTAATTCTTACGGATCTGTTCAATTCCCACACAACAATCCAGACCATTCTTCCCATGGGAGATTTCCAAATTTTCATTCTAGTTATCCAACTCAACCTAATTCTTACGGATCTGTTCAATTCCCACACAACAATCCAGACCATTCTTCCCATGGGAGATTTCCAAATTTTCATTCTAGTTATCCAACTCAACCTAATTCTTACGGATCTGTTCAATTCCCACACAACAATCCAGGCCATTCTTCCCATGGGAGATTTCCAAATTTTCATTCTAGTTATCCAACTCAACCTAATTCTTACGGATCTGTTCAATTCCCACAGAACAATCCGTGTCCGAGGCCAATTTATGGCGGACAGACATCGTCACTGTCGCCGTCCCTCTGGGGATCGATGTTTGGGGTTACAATGATTTCTTCTTTGGTTGAAAATTTAACAGTAGGCGCTGTTACCGACTTTATTTTTGGTTCCATTGATTCCTAA

Protein sequence

MAPELTKIVSHVHPNHPLNYYSDHHVYTCQGCKTSGIGNRFRCHICSVDVHIYCLDCPPQLSSFLHTHSLALLPCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPEQLHHGIDKRHKLRLHKLSSGRCSVCESDCSYLWVYSCNVCRVNIHPQCILKPYGPRRSENPAVPPSDSRSIPYAHEPSGFGGYGYAGGGGGHSSHWRFPNEPNSYGSVQFPHNNPGHSSRWRFPNFHSSYPTQPNSYGSVQFPHNNPDHSSHGRFPNFHSSYPTQPNSYGSVQFPHNNPDHSSHGRFPNFHSSYPTQPNSYGSVQFPHNNPGHSSHGRFPNFHSSYPTQPNSYGSVQFPQNNPCPRPIYGGQTSSLSPSLWGSMFGVTMISSLVENLTVGAVTDFIFGSIDS

Homology

[Close]

BLAST of Carg13234 vs. NCBI nr
Match: XP_022931897.1 (uncharacterized protein LOC111438174 isoform X2 [Cucurbita moschata])

HSP 1 Score: 480.7 bits (1236), Expect = 4.8e-132
Identity = 330/400 (82.50%), Postives = 331/400 (82.75%), Query Frame = 0


Query: 1   MAPELTKIVSHVHPNHPLNYYSDHHVYTCQGCKTSGIGNRFRCHICSVDVHIYCLDCPPQ 60
           MAPELTKIVSHVHPNHPLNYYSD HVYTCQGCKTSGIGNRFRCHICSVDVHIYCLDCPPQ
Sbjct: 1   MAPELTKIVSHVHPNHPLNYYSDPHVYTCQGCKTSGIGNRFRCHICSVDVHIYCLDCPPQ 60

Query: 61  LSSFLHTHSLALLPCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPEQLHHGIDKR 120
           L+SFLHTHSLALLPCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPEQLHHGIDKR
Sbjct: 61  LASFLHTHSLALLPCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPEQLHHGIDKR 120

Query: 121 HKLRLHKLSSGRCSVCESDCSYLWVYSCNVCRVNIHPQCILKPYGPRRSENPAVPPSDSR 180
           HKLRLHKLSSGRCSVCESDCSYLWVYSCNVCRVNIHPQCILKPYGPRRSENPAVPPSDSR
Sbjct: 121 HKLRLHKLSSGRCSVCESDCSYLWVYSCNVCRVNIHPQCILKPYGPRRSENPAVPPSDSR 180

Query: 181 SIPYAHEPSGFGGYGYAGGGGGHSSHWRXXXXXXXXXXXXXXXXXXXXXXXXXXXXFXXX 240
           SIPYAHEPSGFGGYGYAGG   HSSHWRXXXXXXXXXXXXXXXXXXXXXXXXXXXXF   
Sbjct: 181 SIPYAHEPSGFGGYGYAGGXXXHSSHWRXXXXXXXXXXXXXXXXXXXXXXXXXXXXF--- 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPRPIY 360
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPRPIY
Sbjct: 301 -XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPRPIY 336

Query: 361 GGQTSSLSPSLWGSMFGVTMISSLVENLTVGAVTDFIFGS 401
           GGQTSSLS SLWGSMFGVTMISSLVENLTVGAVTDFIFGS
Sbjct: 361 GGQTSSLSSSLWGSMFGVTMISSLVENLTVGAVTDFIFGS 336

[Close]

BLAST of Carg13234 vs. NCBI nr
Match: XP_022931896.1 (uncharacterized protein LOC111438174 isoform X1 [Cucurbita moschata])

HSP 1 Score: 472.6 bits (1215), Expect = 1.3e-129
Identity = 331/400 (82.75%), Postives = 332/400 (83.00%), Query Frame = 0


Query: 1   MAPELTKIVSHVHPNHPLNYYSDHHVYTCQGCKTSGIGNRFRCHICSVDVHIYCLDCPPQ 60
           MAPELTKIVSHVHPNHPLNYYSD HVYTCQGCKTSGIGNRFRCHICSVDVHIYCLDCPPQ
Sbjct: 1   MAPELTKIVSHVHPNHPLNYYSDPHVYTCQGCKTSGIGNRFRCHICSVDVHIYCLDCPPQ 60

Query: 61  LSSFLHTHSLALLPCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPEQLHHGIDKR 120
           L+SFLHTHSLALLPCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPEQLHHGIDKR
Sbjct: 61  LASFLHTHSLALLPCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPEQLHHGIDKR 120

Query: 121 HKLRLHKLSSGRCSVCESDCSYLWVYSCNVCRVNIHPQCILKPYGPRRSENPAVPPSDSR 180
           HKLRLHKLSSGRCSVCESDCSYLWVYSCNVCRVNIHPQCILKPYGPRRSENPAVPPSDSR
Sbjct: 121 HKLRLHKLSSGRCSVCESDCSYLWVYSCNVCRVNIHPQCILKPYGPRRSENPAVPPSDSR 180

Query: 181 SIPYAHEPSGFGGYGYAGGGGGHSSHWRXXXXXXXXXXXXXXXXXXXXXXXXXXXXFXXX 240
           SIPYAHEPSGFGGYGYA     HSSHWR                                
Sbjct: 181 SIPYAHEPSGFGGYGYAXXXXXHSSHWR-------------------------------- 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
                             XXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXX
Sbjct: 241 ------FPNSVQFPHNNPXXXXXXXXXXXHSSYPTQPNSYXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPRPIY 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPRPIY
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPRPIY 360

Query: 361 GGQTSSLSPSLWGSMFGVTMISSLVENLTVGAVTDFIFGS 401
           GGQTSSLS SLWGSMFGVTMISSLVENLTVGAVTDFIFGS
Sbjct: 361 GGQTSSLSSSLWGSMFGVTMISSLVENLTVGAVTDFIFGS 362

[Close]

BLAST of Carg13234 vs. NCBI nr
Match: XP_008448356.1 (PREDICTED: diacylglycerol kinase theta-like [Cucumis melo])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 120/200 (60.00%), Postives = 141/200 (70.50%), Query Frame = 0


Query: 10  SHVHPNHPLNYYSDHHVYTCQGCKTSGIGNRFRCHICSVDVHIYCLDCPPQLSSFLHTHS 69
           SH HPNHPL +YSD   YTC  C T   G RFRC  C VD+H +C + P +LSSFLH+H 
Sbjct: 11  SHFHPNHPLTHYSDDQKYTCHICNTVDSGLRFRCQPCHVDIHKFCSNSPEELSSFLHSHP 70

Query: 70  LALLPCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPEQLHHGIDKRHKLRLHKLS 129
           LAL+P M+HR CD+CRE I G+FYRC+ CDFDVHPLCTQ PEQL H ID RHKL L KLS
Sbjct: 71  LALIPPMNHRQCDICRESINGMFYRCNHCDFDVHPLCTQFPEQLRHLIDGRHKLTLRKLS 130

Query: 130 SGRCSVCESDCSYLWVYSCNVCRVNIHPQCILKPYGPRRSENPAVPPSDSRSIPY----- 189
           SGRCSVCE+DCS  WVY C+VCRVNIHP+CIL+PYG           + +R I Y     
Sbjct: 131 SGRCSVCETDCSSFWVYGCDVCRVNIHPRCILRPYG---------SSTGTRGISYWQAPP 190

Query: 190 ---AHEPSGFGGYGYAGGGG 202
              AH+P+G+GG  +A GGG
Sbjct: 191 WTTAHQPNGYGGGYFAYGGG 201

[Close]

BLAST of Carg13234 vs. NCBI nr
Match: XP_004142189.1 (PREDICTED: diacylglycerol kinase theta-like [Cucumis sativus] >KGN54292.1 hypothetical protein Csa_4G297435 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 4.0e-62
Identity = 117/198 (59.09%), Postives = 136/198 (68.69%), Query Frame = 0


Query: 9   VSHVHPNHPLNYYSDHHVYTCQGCKTSGIGNRFRCHI-CSVDVHIYCLDCPPQLSSFLHT 68
           +SH HP+HPL +YSD   YTC  CKT G G RFRC   C VD+H+YC D P +LSSFLH+
Sbjct: 11  ISHFHPDHPLTHYSDDQEYTCHICKTVGSGPRFRCQANCHVDIHLYCTDPPKELSSFLHS 70

Query: 69  HSLALLPCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPEQLHHGIDKRHKLRLHK 128
           H LAL+  M+HR C++CRE I G+FYRC+ CDFDVHPLCTQ PEQL H ID  HKL   K
Sbjct: 71  HRLALIHQMNHRRCNICRESINGMFYRCNHCDFDVHPLCTQFPEQLRHLIDGCHKLTFRK 130

Query: 129 LSSGRCSVCESDCSYLWVYSCNVCRVNIHPQCILKPYGPRRSENPAVPPSDSRSIPYAHE 188
           LSSGRCS+CE DCS  WVY C+VCRVNIHP+CILKPYG          P+ +R IPY   
Sbjct: 131 LSSGRCSICEEDCSSFWVYGCDVCRVNIHPKCILKPYG---------SPTGTRGIPYCQA 190

Query: 189 PSGFGGYGYAGGGGGHSS 206
           P         G GGG+ S
Sbjct: 191 PQWTTAPHPHGYGGGYFS 199

[Close]

BLAST of Carg13234 vs. NCBI nr
Match: XP_022151548.1 (uncharacterized protein LOC111019463 [Momordica charantia])

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-58
Identity = 119/224 (53.12%), Postives = 137/224 (61.16%), Query Frame = 0


Query: 1   MAPELTKIVSH-VHPNHPLNYYSDHHVYTCQGCKTSGIGNRFRCHICSVDVHIYCLDCPP 60
           MAP      SH  HPNHPL ++SD   Y C  CKTSG G+RFRCH C  ++H YC DCP 
Sbjct: 1   MAPVPKNTKSHFTHPNHPLLHHSDGQDYCCDACKTSGSGSRFRCHACDFNLHEYCADCPQ 60

Query: 61  QLSSFLHTHSLALL------PCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPEQL 120
           +L SFLH H LAL+         + R CDVCR  +EGLFYRC  CDFDVHPLCTQLP QL
Sbjct: 61  KLPSFLHRHPLALVVRKAQGARQNDRICDVCRGHVEGLFYRCKDCDFDVHPLCTQLPNQL 120

Query: 121 HHGIDKRHKLRLHKLSSGRCSVCESDCSYLWVYSCNVCRVNIHPQCILKPYGPRRSENPA 180
            H ID  H L LHK SS  C+VC+ DCS LWVY C+VCR+NIH  C+L+PYG     +PA
Sbjct: 121 RHVIDPNHSLNLHKPSSASCAVCKIDCSSLWVYGCDVCRLNIHLDCLLQPYGSPSDPSPA 180

Query: 181 VPPSD---SRSIPYAHEPS-------------GFGGYGYAGGGG 202
            PP+    SR IP+A  P              G  GYGYA   G
Sbjct: 181 APPASRCASRGIPFAPPPQWATGPPPFSYGHFGNFGYGYAAPYG 224

[Close]

BLAST of Carg13234 vs. TAIR10
Match: AT2G37820.1 (Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 147.1 bits (370), Expect = 2.3e-35
Identity = 82/219 (37.44%), Postives = 107/219 (48.86%), Query Frame = 0


Query: 1   MAPELTK--IVSHVHPNHPLNYYSDHHVYTCQGCKTSGIGNRFRCHICSVDVHIYCLDCP 60
           MAP   K   V H    HPL  ++    + C GCKT G G  +RC  C+ D+H YC  CP
Sbjct: 1   MAPRTLKRHTVQHFTHIHPLTEFNSIGDFICDGCKTYGSGKTYRCEPCNYDLHEYCATCP 60

Query: 61  PQLSSFLH-THSLALL------PCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPE 120
             L +F+H  H L+L+         + R+CD+C E +EGLFYRC  C+FDVHPLCTQLP+
Sbjct: 61  LTLPTFIHPQHELSLVVRKQQSTRQNDRACDICDESVEGLFYRCKICEFDVHPLCTQLPQ 120

Query: 121 QLHHGIDKRHKLRLHKLSSGRCSVCESDCSYLWVYSCNVCRVNIHPQCILKPYGPRRSEN 180
            + H +   H L      +  C VC   C   W Y C +CR +IH +CIL       S+ 
Sbjct: 121 HVRHVLHPAHHLEFRPSGASTCMVCHGPCQ-SWRYRCELCRFDIHMECILAVCNTSPSDQ 180

Query: 181 PAVPPSDSRSI--------PYAHEPSGFGGYGYAGGGGG 203
                + SR +        P         GY YA G  G
Sbjct: 181 TDASGTKSRGLKQQGGQPSPPTQWQQPHFGYPYAYGPMG 218

[Close]

BLAST of Carg13234 vs. TAIR10
Match: AT2G37800.1 (Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-30
Identity = 65/161 (40.37%), Postives = 88/161 (54.66%), Query Frame = 0


Query: 8   IVSHVHPNHPLNYYSDHHVYTCQGCKTSGIGNRFRCHICSVDVHIYCLDCPPQLSSFLH- 67
           +V H    HPL     +  +TC GCKT G G  +RC  C  ++H +C  CP  L++F+H 
Sbjct: 144 VVQHFTHIHPLTKVDGYGEFTCDGCKTYGFGKTYRCTRCDYNLHDHCATCPSTLATFMHP 203

Query: 68  THSLALL---PCMDH---RSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPEQLHHGIDKR 127
            H L L+   P   H   R CD+C E  EGL+Y+C+ C FDVHPLCTQLP+ + H     
Sbjct: 204 QHELRLVFRGPEHTHQNKRMCDICDESAEGLYYQCEPCGFDVHPLCTQLPQHVRHVPHPA 263

Query: 128 HKLRLHKL-SSGRCSVCESDCSYLWVYSCNVCRVNIHPQCI 161
           H L L +  +S  C VC       W Y C  C +++H +CI
Sbjct: 264 HLLELSQWGASSICMVCRG-AIRSWRYKCGPCGLDVHMECI 303

[Close]

BLAST of Carg13234 vs. TAIR10
Match: AT2G37810.1 (Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-27
Identity = 64/196 (32.65%), Postives = 93/196 (47.45%), Query Frame = 0


Query: 7   KIVSHVHPNHPLNYYSDHHVYTCQGCKTSGIGNRFRCHICSVDVHIYCLDCPPQLSSFLH 66
           ++V H    HPL    ++  +TC GCKT G G  +RC  C   +H +C  CP  L SF+H
Sbjct: 9   QVVQHFSHTHPLTKVDEYGEFTCGGCKTYGFGKTYRCAPCDYVLHDHCATCPFTLISFMH 68

Query: 67  -THSLALLPCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPEQLHHGIDKRHKLRL 126
             H L L        C++C   +EG++Y C++C FDVHPLCTQ  + + +     H L L
Sbjct: 69  PQHELRLFVNGSENMCNICHRLVEGVYYHCETCGFDVHPLCTQHHQHVSYVPHPAHLLEL 128

Query: 127 HKL-SSGRCSVCESDCSYLWVYSCNVCRVNIHPQCILKPYGPRRSENPAVPPSDSRSIPY 186
            +  +S  C VC       W Y C  C +++H +C+     P  +E      +     PY
Sbjct: 129 SQCGASNTCMVCRG-AILSWRYKCGPCMLDVHVECV-NSSAPAATEPQMDLNTSQDPQPY 188

Query: 187 AHEPSGFGGYGYAGGG 201
             E  G   Y +   G
Sbjct: 189 NDECGGIHNYEHTNKG 202

[Close]

BLAST of Carg13234 vs. TAIR10
Match: AT2G37780.1 (Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 97.4 bits (241), Expect = 2.1e-20
Identity = 46/109 (42.20%), Postives = 58/109 (53.21%), Query Frame = 0


Query: 5   LTKIVSHVHPNHPLNYYSDHHVYTCQGCKTSGIGNRFRCHICSVDVHIYCLDCPPQLSSF 64
           + + + H   NH L   +    YTC GCK  G G  +RC  C  D+H YC  CP  L + 
Sbjct: 3   IPQTIQHFTHNHLLTQVNGIGTYTCDGCKLYGEGRTYRCSDCDYDLHEYCATCPSILLNS 62

Query: 65  LH--THSLALL-PCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLP 111
            H   H L+L    M  RSC VCR  I+G+FY+C  C F+ HPLCT  P
Sbjct: 63  CHGPDHELSLFNGHMTERSCYVCRVSIQGMFYKCRQCSFEAHPLCTYAP 111

[Close]

BLAST of Carg13234 vs. TAIR10
Match: AT1G20990.1 (Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-14
Identity = 49/171 (28.65%), Postives = 64/171 (37.43%), Query Frame = 0


Query: 7   KIVSHVHPNHPLNYYSDHHVYTCQGCKTSGIGNRFRCHICSVDVHIYCLDCPPQLSS--F 66
           ++V   HP H L       +YTC GCK  G G R+ C  C   +H +C   PPQL S  F
Sbjct: 67  EMVHFGHPQHVLVKVELPDIYTCAGCKEEGAGVRYVCQECDYQLHEFCALAPPQLKSHPF 126

Query: 67  LHTHSLALLP-----CMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPEQLHHGIDK 126
            + H L          +    CDVC    +G  +RC +C F +HP C  L   L      
Sbjct: 127 HYQHQLLFFAKPAKGGIVKSKCDVCGRSPKGYTFRCKACSFQMHPGCAMLSPSLSXXXXX 186

Query: 127 RHKLRLHKLSSGR-----------CSVCESDCSYLWVYSCNVCRVNIHPQC 160
                                   C  C+       VY C VC  ++H  C
Sbjct: 187 XXXXXXXXXXXXXXXXXXXXXGFLCGECKRGKRTGRVYRCTVCDYHLHAVC 237

[Close]

BLAST of Carg13234 vs. Swiss-Prot
Match: sp|Q7Y0F2|NRX12_ORYSJ (Probable nucleoredoxin 1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405900 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 6.9e-05
Identity = 22/49 (44.90%), Postives = 26/49 (53.06%), Query Frame = 0


Query: 58  PPQLSSFLHTHSLALLPCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLC 107
           P +L   LH H L L  C  +  CD C E  +   YRC  CDFD+HP C
Sbjct: 502 PEKLKHDLHDHELVLTRCTTY-GCDGCDEMGDSWSYRCKECDFDLHPKC 549

[Close]

BLAST of Carg13234 vs. Swiss-Prot
Match: sp|Q7Y0E8|NRX11_ORYSJ (Probable nucleoredoxin 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405500 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 7.6e-04
Identity = 25/63 (39.68%), Postives = 30/63 (47.62%), Query Frame = 0


Query: 58  PPQLSSFLH-THSLALLPCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPEQLHHG 117
           P +L   LH  H L L  C  +  CD C E      YRC  CDFD+HP C    E+   G
Sbjct: 491 PGKLKHELHDEHELVLTRCTTY-GCDGCDEMGSSWSYRCRECDFDLHPKCALGKEEEKKG 550

Query: 118 IDK 120
            D+
Sbjct: 551 DDE 552

[Close]

BLAST of Carg13234 vs. TrEMBL
Match: tr|A0A1S3BK43|A0A1S3BK43_CUCME (diacylglycerol kinase theta-like OS=Cucumis melo OX=3656 GN=LOC103490570 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 7.5e-65
Identity = 120/200 (60.00%), Postives = 141/200 (70.50%), Query Frame = 0


Query: 10  SHVHPNHPLNYYSDHHVYTCQGCKTSGIGNRFRCHICSVDVHIYCLDCPPQLSSFLHTHS 69
           SH HPNHPL +YSD   YTC  C T   G RFRC  C VD+H +C + P +LSSFLH+H 
Sbjct: 11  SHFHPNHPLTHYSDDQKYTCHICNTVDSGLRFRCQPCHVDIHKFCSNSPEELSSFLHSHP 70

Query: 70  LALLPCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPEQLHHGIDKRHKLRLHKLS 129
           LAL+P M+HR CD+CRE I G+FYRC+ CDFDVHPLCTQ PEQL H ID RHKL L KLS
Sbjct: 71  LALIPPMNHRQCDICRESINGMFYRCNHCDFDVHPLCTQFPEQLRHLIDGRHKLTLRKLS 130

Query: 130 SGRCSVCESDCSYLWVYSCNVCRVNIHPQCILKPYGPRRSENPAVPPSDSRSIPY----- 189
           SGRCSVCE+DCS  WVY C+VCRVNIHP+CIL+PYG           + +R I Y     
Sbjct: 131 SGRCSVCETDCSSFWVYGCDVCRVNIHPRCILRPYG---------SSTGTRGISYWQAPP 190

Query: 190 ---AHEPSGFGGYGYAGGGG 202
              AH+P+G+GG  +A GGG
Sbjct: 191 WTTAHQPNGYGGGYFAYGGG 201

[Close]

BLAST of Carg13234 vs. TrEMBL
Match: tr|A0A0A0L121|A0A0A0L121_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G297435 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.7e-62
Identity = 117/198 (59.09%), Postives = 136/198 (68.69%), Query Frame = 0


Query: 9   VSHVHPNHPLNYYSDHHVYTCQGCKTSGIGNRFRCHI-CSVDVHIYCLDCPPQLSSFLHT 68
           +SH HP+HPL +YSD   YTC  CKT G G RFRC   C VD+H+YC D P +LSSFLH+
Sbjct: 11  ISHFHPDHPLTHYSDDQEYTCHICKTVGSGPRFRCQANCHVDIHLYCTDPPKELSSFLHS 70

Query: 69  HSLALLPCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPEQLHHGIDKRHKLRLHK 128
           H LAL+  M+HR C++CRE I G+FYRC+ CDFDVHPLCTQ PEQL H ID  HKL   K
Sbjct: 71  HRLALIHQMNHRRCNICRESINGMFYRCNHCDFDVHPLCTQFPEQLRHLIDGCHKLTFRK 130

Query: 129 LSSGRCSVCESDCSYLWVYSCNVCRVNIHPQCILKPYGPRRSENPAVPPSDSRSIPYAHE 188
           LSSGRCS+CE DCS  WVY C+VCRVNIHP+CILKPYG          P+ +R IPY   
Sbjct: 131 LSSGRCSICEEDCSSFWVYGCDVCRVNIHPKCILKPYG---------SPTGTRGIPYCQA 190

Query: 189 PSGFGGYGYAGGGGGHSS 206
           P         G GGG+ S
Sbjct: 191 PQWTTAPHPHGYGGGYFS 199

[Close]

BLAST of Carg13234 vs. TrEMBL
Match: tr|A0A0A0L2C5|A0A0A0L2C5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G297420 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.8e-50
Identity = 97/182 (53.30%), Postives = 120/182 (65.93%), Query Frame = 0


Query: 1   MAPELTKIVSH-VHPNHPLNYYS-DHHVYTCQGCKTSGIGNRFRCHICSVDVHIYCLDCP 60
           MAP  T    H  HPNHPL  +S D H Y C GCKTSG G+RFRCH C+ D+H YC +CP
Sbjct: 1   MAPVPTTTKFHFTHPNHPLQLHSDDRHDYICGGCKTSGSGSRFRCHSCNFDLHDYCANCP 60

Query: 61  PQL-SSFLHTHSLALL------PCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPE 120
            +L SS +H H L L+        ++ R CD+CR+ ++GLFYRC  CDFD HPLCTQLP+
Sbjct: 61  EKLISSSIHHHPLTLVLRKPDGARLNQRICDICRDAVDGLFYRCKDCDFDAHPLCTQLPK 120

Query: 121 QLHHGIDKRHKLRLHKLSSGRCSVCESDCSYLWVYSCNVCRVNIHPQCILKPYGPRRSEN 174
            LHH ID +H L L K  SG C+VC+ DCS  WVY C +CRV IH  C+L+PY    S+ 
Sbjct: 121 TLHHLIDNKHALNLQKPPSGGCAVCKKDCSSNWVYGCQICRVYIHFDCLLEPYDSPPSQQ 180

[Close]

BLAST of Carg13234 vs. TrEMBL
Match: tr|A0A1S4DX66|A0A1S4DX66_CUCME (uncharacterized protein LOC103490554 OS=Cucumis melo OX=3656 GN=LOC103490554 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 7.5e-49
Identity = 94/173 (54.34%), Postives = 117/173 (67.63%), Query Frame = 0


Query: 1   MAPELTKIVSH-VHPNHPLNYYSD-HHVYTCQGCKTSGIGNRFRCHICSVDVHIYCLDCP 60
           MAP  T    H  HPNHPL+ +SD HH Y C GCKTSG G+RFRCH C+ D+H YC +CP
Sbjct: 1   MAPVPTTTKFHFTHPNHPLHLHSDHHHDYICGGCKTSGSGSRFRCHSCNFDLHDYCANCP 60

Query: 61  PQL-SSFLHTHSLALL------PCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPE 120
            +L SS +H H L L+        ++ R CD+CR+ ++GLFYRC  C+FD HPLCTQLP+
Sbjct: 61  EKLISSSVHHHPLTLVVRNPEGARINDRICDICRDAVDGLFYRCKDCEFDAHPLCTQLPK 120

Query: 121 QLHHGIDKRHKLRLHKLSSGRCSVCESDCSYLWVYSCNVCRVNIHPQCILKPY 165
            L H ID +H L L K  SG C+VC+ DCS LWVY C +CRV IH  C+ +PY
Sbjct: 121 SLRHLIDDKHYLNLQKPPSGGCAVCKKDCSSLWVYGCQICRVYIHFDCLWEPY 173

[Close]

BLAST of Carg13234 vs. TrEMBL
Match: tr|A0A0A0KXA5|A0A0A0KXA5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296870 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 8.0e-43
Identity = 91/196 (46.43%), Postives = 113/196 (57.65%), Query Frame = 0


Query: 1   MAPELTKIVS----HVHPNHPLNYYSDHHVYTCQGCKTSGIGNRFRCHICSVDVHIYCLD 60
           MAP L K  +      HPNHPL + S+   Y C GCKT G  +R+RCH C  D+H  C +
Sbjct: 1   MAPILQKNTTTKFHFTHPNHPLIHLSNDQDYFCDGCKTFGSDSRYRCHCCDFDIHELCAN 60

Query: 61  CPPQLSSF-LHTHSLAL---LPCMDHRSCDVCRERIEGLFYRCDSCDFDVHPLCTQLPEQ 120
           CP +LSS   H H LAL   +  +  R CD+C + + GL YRC+ CDF+ HPLCTQLP++
Sbjct: 61  CPAKLSSLSFHHHLLALDFQIRTLVDRCCDICHDPVHGLVYRCNDCDFNAHPLCTQLPQE 120

Query: 121 LHHGIDKRHKLRLHKLSSGRCSVCESDCSYLWVYSCNVCRVNIHPQCILKPYGPRRSENP 180
           L H I   H L L KL  G C VC  DCS LWVY C VC + IH  C+ +   P  S  P
Sbjct: 121 LRHVIHDNHPLNLQKLRFGCCVVCRKDCSSLWVYGCKVCGLYIHLDCLSE---PNESLFP 180

Query: 181 AVPPSDSRSIPYAHEP 189
               + SR IP+A  P
Sbjct: 181 LSSETTSRGIPFAPPP 193

The following BLAST results are available for this feature:

BLAST of Carg13234 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931897.1	4.8e-132	82.50	uncharacterized protein LOC111438174 isoform X2 [Cucurbita moschata]	[more]
XP_022931896.1	1.3e-129	82.75	uncharacterized protein LOC111438174 isoform X1 [Cucurbita moschata]	[more]
XP_008448356.1	1.1e-64	60.00	PREDICTED: diacylglycerol kinase theta-like [Cucumis melo]	[more]
XP_004142189.1	4.0e-62	59.09	PREDICTED: diacylglycerol kinase theta-like [Cucumis sativus] >KGN54292.1 hypoth...	[more]
XP_022151548.1	1.6e-58	53.13	uncharacterized protein LOC111019463 [Momordica charantia]	[more]

BLAST of Carg13234 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G37820.1	2.3e-35	37.44	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G37800.1	1.3e-30	40.37	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G37810.1	1.8e-27	32.65	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G37780.1	2.1e-20	42.20	Cysteine/Histidine-rich C1 domain family protein	[more]
AT1G20990.1	1.0e-14	28.65	Cysteine/Histidine-rich C1 domain family protein	[more]

BLAST of Carg13234 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q7Y0F2\|NRX12_ORYSJ	6.9e-05	44.90	Probable nucleoredoxin 1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405...	[more]
sp\|Q7Y0E8\|NRX11_ORYSJ	7.6e-04	39.68	Probable nucleoredoxin 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405...	[more]

BLAST of Carg13234 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BK43\|A0A1S3BK43_CUCME	7.5e-65	60.00	diacylglycerol kinase theta-like OS=Cucumis melo OX=3656 GN=LOC103490570 PE=4 SV...	[more]
tr\|A0A0A0L121\|A0A0A0L121_CUCSA	2.7e-62	59.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G297435 PE=4 SV=1	[more]
tr\|A0A0A0L2C5\|A0A0A0L2C5_CUCSA	1.8e-50	53.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G297420 PE=4 SV=1	[more]
tr\|A0A1S4DX66\|A0A1S4DX66_CUCME	7.5e-49	54.34	uncharacterized protein LOC103490554 OS=Cucumis melo OX=3656 GN=LOC103490554 PE=...	[more]
tr\|A0A0A0KXA5\|A0A0A0KXA5_CUCSA	8.0e-43	46.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296870 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019786	Zinc_finger_PHD-type_CS
IPR004146	DC1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0035556	intracellular signal transduction
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13234-RA	Carg13234-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004146	DC1	PFAM	PF03107	C1_2	coord: 64..106 e-value: 5.7E-8 score: 32.8
None	No IPR available	PANTHER	PTHR13871	THIOREDOXIN	coord: 1..401
None	No IPR available	PANTHER	PTHR13871:SF55	CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN-RELATED	coord: 1..401
None	No IPR available	SUPERFAMILY	SSF57889	Cysteine-rich domain	coord: 7..68
None	No IPR available	SUPERFAMILY	SSF57889	Cysteine-rich domain	coord: 90..164
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 29..98

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg13234	Cla018179	Watermelon (97103) v1	carwmB0580
Carg13234	Csa4G296870	Cucumber (Chinese Long) v2	carcuB0607
Carg13234	MELO3C003159	Melon (DHL92) v3.5.1	carmeB0584
Carg13234	ClCG04G007820	Watermelon (Charleston Gray)	carwcgB0569
Carg13234	CSPI04G15000	Wild cucumber (PI 183967)	carcpiB0613
Carg13234	Cucsa.066530	Cucumber (Gy14) v1	carcgyB0653
Carg13234	CmaCh03G004050	Cucurbita maxima (Rimu)	carcmaB0815
Carg13234	CmaCh07G010140	Cucurbita maxima (Rimu)	carcmaB0818
Carg13234	CmoCh03G004180	Cucurbita moschata (Rifu)	carcmoB0791
Carg13234	Lsi01G014590	Bottle gourd (USVL1VR-Ls)	carlsiB526
Carg13234	Cp4.1LG19g03300	Cucurbita pepo (Zucchini)	carcpeB0830
Carg13234	CsGy4G014420	Cucumber (Gy14) v2	carcgybB0581
Carg13234	MELO3C003159.2	Melon (DHL92) v3.6.1	carmedB0591
Carg13234	CsaV3_4G025360	Cucumber (Chinese Long) v3	carcucB0614
Carg13234	Cla97C04G074500	Watermelon (97103) v2	carwmbB0609
Carg13234	Bhi03G001596	Wax gourd	carwgoB0693

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg13234	Carg19951	Silver-seed gourd	carcarB514

The following block(s) are covering this gene:


Gene	Organism	Block
Carg13234	Wax gourd	carwgoB0692
Carg13234	Silver-seed gourd	carcarB023
Carg13234	Silver-seed gourd	carcarB196
Carg13234	Silver-seed gourd	carcarB302
Carg13234	Silver-seed gourd	carcarB533
Carg13234	Cucumber (Gy14) v2	carcgybB0580
Carg13234	Cucumber (Gy14) v2	carcgybB0586
Carg13234	Cucumber (Gy14) v1	carcgyB0656
Carg13234	Cucumber (Gy14) v1	carcgyB0657
Carg13234	Cucurbita maxima (Rimu)	carcmaB0811
Carg13234	Cucurbita maxima (Rimu)	carcmaB0816
Carg13234	Cucurbita maxima (Rimu)	carcmaB0817
Carg13234	Cucurbita moschata (Rifu)	carcmoB0787
Carg13234	Cucurbita moschata (Rifu)	carcmoB0788
Carg13234	Cucurbita moschata (Rifu)	carcmoB0793
Carg13234	Cucurbita moschata (Rifu)	carcmoB0794
Carg13234	Cucurbita moschata (Rifu)	carcmoB0795
Carg13234	Cucurbita pepo (Zucchini)	carcpeB0825
Carg13234	Cucurbita pepo (Zucchini)	carcpeB0828
Carg13234	Cucurbita pepo (Zucchini)	carcpeB0831
Carg13234	Cucurbita pepo (Zucchini)	carcpeB0832
Carg13234	Wild cucumber (PI 183967)	carcpiB0612
Carg13234	Wild cucumber (PI 183967)	carcpiB0619
Carg13234	Cucumber (Chinese Long) v2	carcuB0606
Carg13234	Cucumber (Chinese Long) v2	carcuB0613
Carg13234	Cucumber (Chinese Long) v3	carcucB0613
Carg13234	Cucumber (Chinese Long) v3	carcucB0620
Carg13234	Bottle gourd (USVL1VR-Ls)	carlsiB529
Carg13234	Bottle gourd (USVL1VR-Ls)	carlsiB530
Carg13234	Melon (DHL92) v3.5.1	carmeB0582
Carg13234	Melon (DHL92) v3.5.1	carmeB0583
Carg13234	Melon (DHL92) v3.6.1	carmedB0589
Carg13234	Melon (DHL92) v3.6.1	carmedB0590
Carg13234	Watermelon (Charleston Gray)	carwcgB0564
Carg13234	Watermelon (Charleston Gray)	carwcgB0565
Carg13234	Watermelon (97103) v1	carwmB0576
Carg13234	Watermelon (97103) v1	carwmB0583
Carg13234	Watermelon (97103) v2	carwmbB0604
Carg13234	Watermelon (97103) v2	carwmbB0605
Carg13234	Watermelon (97103) v2	carwmbB0612