Carg13194 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTGGTAAAACTAAATCAAGATTTTTAGATCTCCTCTCTCTCTCTCTCTCTCTCTCTCTTCCGATCCAAGTAAACTCCTCGGTGTGTTCAACAACAGTCTCGAGCGCCGACAATTTACTTCAACATAATCTCGATCTGAGTTTTTCTCGCCTCAAGATCCGATATCAATTTGCTTCCACTTCCAATTGATTCAGTAGCGTTCTGAGCATCCTTCTGAATTGTGTTTTTCATTGATGTTATGATATGGTTTCCAAGCTTGGAAGCTAGGGTTTCTCTTGGCCATGGCAACCTCCCAAACTCCGAGTTGGCGGGAGGGTATGTCCTCTGACAACATTAAGGGCTTGGTTCTTGCTCTTTCCTCTAGTTTCTTTATTGGTGCTAGCTTCATTGTTAAGAAAAAGGGCTTGAAGAAAGCCGGCGCTTCAGGAGTCAGAGCAGGTTTCTTACTCTCTCTTCTTGTTTGCTTCAATTTACCCCAACAAGGTGTTAATGTAGTTCCTGGATTTCTTTGTTTTTGACTCCTTGAGGAATTTTTAGAAAGCTTCTGTAATTGAGTGTTAATTATGTGCAATTAGTGTTTCATGTCTTGGCCCGTTCTTAATTAGTGGTGGGTCACGCTTTTAATGAGGTTCTCGACGGATTCGGTTGATTTGAATTGGAAAATTGAATCTATTATACCCATTAGTTAATCAATTGTAGTACTTGCTTATTTGGAGGCCTATTGCCAAAAAAGGTTTATTTAATCCCTTTTAAGTATCAGAACCTGGGCTAAATGTTGTGAATTTAATTCAGTATGTTTTAATTTTATCAACATCACGAATACCATTGTGTTTAGCCTTCAAGATTTTTGTCTAGTAACTTATCGTCTTTGAAGTTGATGATTGGCGCTTGCTTATCTTTATTCATGCTTTAAGGTGCACGGTAACTGTTATCTAGCAGATTTTTTACTGTGGTTGCTGTGATGATTTATGTCAGGAGTTGGAGGTTATTCTTACTTATACGAGCCACTATGGTGGGTGGGCATGATTACAAGTAAGTCTTTTTGGCTTTTTATAATGTAGCTTATGATAATGGTCTTGATTATTTATTTCCCAGCTAGGCTTGACATACTTCTCTGCTCAGTTTTTTTCAAGTCCTTTAGATACTAAATGAACATTTAGGATCCACTAGCTCTTTTTGAACTTTATATACAATCAGTTCACGTTGTTATTTTGATACAGTGTGGCACCTTTTTTAAGAACATGTAATCACTAAATAGAGATCACTGAATTTACTTGTAAGATCTCCCACCAAACAGATTTCTGAATTTATATGTAAGATTTTCGATCAGCCTGTAAGACCGGATGTTCCTCTATTAAGCAAACATTTTGTCCAGTAGATGTTCCTCTATTAAGCAAACATTTTCTGTGAACAAGTGATTAGGTATTTGGCTTCTTCCTCTATTCAGTGCATTTAGTTTCAATAAATTTACAGAAAGGAGCAAATTATTGTCATTGTTCTCAAATATTAATGGAAAAAAGGACGTAGGGGCCGGGGCTTTTCTTTTTCCAGTAAAAGTGGACTTAGATATCAATGTATTCTATGTAAAACTAGCATGGTGACGCTTTATTGTAGCAAAGCATAGAATCCTTTTGAATAGACTGATGTATAATGAAAGGGTATATATATATATACATATATATATATTTTTTTTTTGAAACTGGAACATAAAAAGGGAAATCTTAACCTCGCAATTGTTATTATATATATATATTTTAAACAAGAAATGAAACTTTTTATTGAAGAATGAAAAGAGACTAATGCTCATGGAATGAAAAAATAAAGTTACAGTGAATAAAAGCATAGATCCTAACCTGACAATTGTTATCTTTACAGTGATTGTAGGAGAAATTGCTAATTTTGCGGCTTATGCATTTGCTCCAGCGTTACTGGTTACTCCACTTGGTGCTCTCAGCATAATTATCAGGCATGGTCTGAAATTGCACACATATTAAGTTAGAATTTATGGTTGTTAATCTCATATTATCTTGATATCTTGCAGTGCAGTACTTGCACATATTATTTTGCGGGAGAGGTTGCATATTTTTGGAATTCTTGGATGCGTTCTTTGTGTAGTGGGTTCCACAACCATTGTGCTCCATGCTCCTCAAGAACGTGAAATTGAATCTGTAACTGAAGTGTGGCAAATGGCCATGGAGCCAGGTAAGTTTTTGTTATTGTGAAATTCTGTCCCTCTCTTTCAAATGTCATTGATTCTGGTTAATAGTGATTTTGGCTATTATTATTATTCTTTCTTTATTTTATTTTCTTCTTTTTATAGACAAGAGTTTTGTTATATATTTTTTCTATTAAATGGATTTACAAATTGTGAAGAGTGTGGAATCCACTTCTCAGAGGCCATTCCAAAACCTCATGGAGCAACCATTTCCAATCATAAGTCTACATTGTTTTGAACAAAATATTATTTCCATATTGTAGCCTGCCCTCTCAAAGTTGTTTTAGTGAAGAAGCAAAGAGAGGAGCTGTTGGCGACTCTTTTCTCACTCACAAGTGTAGCTAGAAGCGTTGGAGCTTCGTATTAAACCAATATGGCCTTTCTTGGTGTCTCCACAATAAAATAAAGACTGTTTACGTCATCTTTTCTGCACTCTCTTCTTAAATGTGAAAGCTCACCACCATATATGGGGTGCATGAGTCAAGAGCATGAGTTCAAATCTTGCTTGACATATATGTATCTTGGTACTCTGGAAAGTGATCTTGAACATGATTCATTATCTGTTGTTTTTGTATTCTATATATGATTCTTCGGTTTTAAGCAGTCATTTATTTTATTTAAATATCATGTTGGTAGTAACTTTACCTTTTATTTTGCAGCCTTTCTGTTGTATGCAGCATCGGTCATGACAACTGTGTTTATACTTATATTCCACTTTATACCACAATATGGCCAGACTCACATTATGGTTTACATTGGTGTATGTTCCCTTGTAGGATCTTTGTCGGTATGTATCCATCTAGCTTCCCTGTTACCTTTGTATTTTCTAAATGTTATCTGCTCCAGTATAAGTTTTTTCCTTGTTCTTCAACTGATTTCGTAACTGAATGTCTAACAACAGGTCATGAGTGTCAAAGCAATAGGAATTGCCTTGAAGCTAACATTGTCAGGAATGAACCAGCTAATATATCCTCAAACGTGGATATTTACTTTAGTTGTGATTACTTGTGTGCTCACCCAGATGAATTATTTAAACAAGGTATGTTGTGCTCATTTAGGGTATTTTCAGAAACACTTTTAGCTTTGGCCCTGTATTGTTATGATATGATAGTTATGGTTCATAGAGTTAATAATTTAATCTCCGGTATTTTTTATAAAAAAAATTGGAATAGATAGCTATTCAACTATGAGTATATATAAGATGAGTTGGTTTGAAGTTTGTACTCCGTTTCTTTTCTGAAGTAGTGCCAGATTATTAAAGGCGAAGCAACCCAAACAATGCAAAAGGGATATTAGTGCAAAAGAACCAAAACAATGCAATTTTCTTGGAACTGTTTCCCTGTGATCAAGAAGAAAGGGATATTAAGTGATTGATGAATGACTTAACCAAATCCATCCATGGATAGAAGGGTGTGAACGTTAAAGTGATCCATGAGAGTTTTAACCAAATTCGTTTGGTAGCTATCATAAAACATGATTTTTCTTCCTGAAGAAATCACCAAGATCATTTGAAACAGGTCATTTCAAGAGTAGACCTTAATACTCAAGAGGGATCAAGACTAAGAGGAGATTACTGTAGTAGTGTTGTGGTGAGTGTTGTGCTGCCAAAATGA ATTTTGGTAAAACTAAATCAAGATTTTTAGATCTCCTCTCTCTCTCTCTCTCTCTCTCTCTTCCGATCCAAGTAAACTCCTCGGTGTGTTCAACAACAGTCTCGAGCGCCGACAATTTACTTCAACATAATCTCGATCTGAGTTTTTCTCGCCTCAAGATCCGATATCAATTTGCTTCCACTTCCAATTGATTCAGTAGCGTTCTGAGCATCCTTCTGAATTGTGTTTTTCATTGATGTTATGATATGGTTTCCAAGCTTGGAAGCTAGGGTTTCTCTTGGCCATGGCAACCTCCCAAACTCCGAGTTGGCGGGAGGGTATGTCCTCTGACAACATTAAGGGCTTGGTTCTTGCTCTTTCCTCTAGTTTCTTTATTGGTGCTAGCTTCATTGTTAAGAAAAAGGGCTTGAAGAAAGCCGGCGCTTCAGGAGTCAGAGCAGGAGTTGGAGGTTATTCTTACTTATACGAGCCACTATGGTGGGTGGGCATGATTACAAGGGCCGGGGCTTTTCTTTTTCCAGTAAAAGTGGACTTAGATATCAATGTATTCTATGTAAAACTAGCATGCGTTACTGGTTACTCCACTTGGTGCTCTCAGCATAATTATCAGGCATGTGCAGTACTTGCACATATTATTTTGCGGGAGAGGTTGCATATTTTTGGAATTCTTGGATGCGTTCTTTGTGTAGTGGGTTCCACAACCATTGTGCTCCATGCTCCTCAAGAACGTGAAATTGAATCTGTAACTGAAGTGTGGCAAATGGCCATGGAGCCAGCCTTTCTGTTGTATGCAGCATCGGTCATGACAACTGTGTTTATACTTATATTCCACTTTATACCACAATATGGCCAGACTCACATTATGGTTTACATTGGTGTATGTTCCCTTGTAGGATCTTTGTCGGTCATGAGTGTCAAAGCAATAGGAATTGCCTTGAAGCTAACATTGTCAGGAATGAACCAGCTAATATATCCTCAAACGTGGATATTTACTTTAGTTGTGATTACTTGTGTGCTCACCCAGATGAATTATTTAAACAAGGTCATTTCAAGAGTAGACCTTAATACTCAAGAGGGATCAAGACTAAGAGGAGATTACTGTAGTAGTGTTGTGGTGAGTGTTGTGCTGCCAAAATGA ATGGCAACCTCCCAAACTCCGAGTTGGCGGGAGGGTATGTCCTCTGACAACATTAAGGGCTTGGTTCTTGCTCTTTCCTCTAGTTTCTTTATTGGTGCTAGCTTCATTGTTAAGAAAAAGGGCTTGAAGAAAGCCGGCGCTTCAGGAGTCAGAGCAGGAGTTGGAGGTTATTCTTACTTATACGAGCCACTATGGTGGGTGGGCATGATTACAAGGGCCGGGGCTTTTCTTTTTCCAGTAAAAGTGGACTTAGATATCAATGTATTCTATGTAAAACTAGCATGCGTTACTGGTTACTCCACTTGGTGCTCTCAGCATAATTATCAGGCATGTGCAGTACTTGCACATATTATTTTGCGGGAGAGGTTGCATATTTTTGGAATTCTTGGATGCGTTCTTTGTGTAGTGGGTTCCACAACCATTGTGCTCCATGCTCCTCAAGAACGTGAAATTGAATCTGTAACTGAAGTGTGGCAAATGGCCATGGAGCCAGCCTTTCTGTTGTATGCAGCATCGGTCATGACAACTGTGTTTATACTTATATTCCACTTTATACCACAATATGGCCAGACTCACATTATGGTTTACATTGGTGTATGTTCCCTTGTAGGATCTTTGTCGGTCATGAGTGTCAAAGCAATAGGAATTGCCTTGAAGCTAACATTGTCAGGAATGAACCAGCTAATATATCCTCAAACGTGGATATTTACTTTAGTTGTGATTACTTGTGTGCTCACCCAGATGAATTATTTAAACAAGGTCATTTCAAGAGTAGACCTTAATACTCAAGAGGGATCAAGACTAAGAGGAGATTACTGTAGTAGTGTTGTGGTGAGTGTTGTGCTGCCAAAATGA MATSQTPSWREGMSSDNIKGLVLALSSSFFIGASFIVKKKGLKKAGASGVRAGVGGYSYLYEPLWWVGMITRAGAFLFPVKVDLDINVFYVKLACVTGYSTWCSQHNYQACAVLAHIILRERLHIFGILGCVLCVVGSTTIVLHAPQEREIESVTEVWQMAMEPAFLLYAASVMTTVFILIFHFIPQYGQTHIMVYIGVCSLVGSLSVMSVKAIGIALKLTLSGMNQLIYPQTWIFTLVVITCVLTQMNYLNKVISRVDLNTQEGSRLRGDYCSSVVVSVVLPK
BLAST of Carg13194 vs. NCBI nr
Match: XP_022942259.1 (probable magnesium transporter NIPA3 isoform X2 [Cucurbita moschata] >XP_022942260.1 probable magnesium transporter NIPA3 isoform X2 [Cucurbita moschata]) HSP 1 Score: 452.2 bits (1162), Expect = 1.3e-123 Identity = 247/284 (86.97%), Postives = 250/284 (88.03%), Query Frame = 0
BLAST of Carg13194 vs. NCBI nr
Match: XP_022981736.1 (probable magnesium transporter NIPA3 isoform X2 [Cucurbita maxima] >XP_022981746.1 probable magnesium transporter NIPA3 isoform X2 [Cucurbita maxima]) HSP 1 Score: 451.8 bits (1161), Expect = 1.7e-123 Identity = 246/284 (86.62%), Postives = 250/284 (88.03%), Query Frame = 0
BLAST of Carg13194 vs. NCBI nr
Match: XP_022942261.1 (probable magnesium transporter NIPA3 isoform X3 [Cucurbita moschata] >XP_022981752.1 probable magnesium transporter NIPA3 isoform X3 [Cucurbita maxima]) HSP 1 Score: 394.0 bits (1011), Expect = 4.2e-106 Identity = 216/254 (85.04%), Postives = 220/254 (86.61%), Query Frame = 0
BLAST of Carg13194 vs. NCBI nr
Match: XP_022942258.1 (probable magnesium transporter NIPA4 isoform X1 [Cucurbita moschata] >XP_023539503.1 probable magnesium transporter NIPA4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 393.7 bits (1010), Expect = 5.5e-106 Identity = 216/255 (84.71%), Postives = 220/255 (86.27%), Query Frame = 0
BLAST of Carg13194 vs. NCBI nr
Match: XP_022981729.1 (probable magnesium transporter NIPA4 isoform X1 [Cucurbita maxima]) HSP 1 Score: 393.7 bits (1010), Expect = 5.5e-106 Identity = 216/255 (84.71%), Postives = 220/255 (86.27%), Query Frame = 0
BLAST of Carg13194 vs. TAIR10
Match: AT1G34470.1 (Protein of unknown function (DUF803)) HSP 1 Score: 318.5 bits (815), Expect = 4.0e-87 Identity = 173/255 (67.84%), Postives = 198/255 (77.65%), Query Frame = 0
BLAST of Carg13194 vs. TAIR10
Match: AT1G71900.1 (Protein of unknown function (DUF803)) HSP 1 Score: 315.1 bits (806), Expect = 4.5e-86 Identity = 171/251 (68.13%), Postives = 192/251 (76.49%), Query Frame = 0
BLAST of Carg13194 vs. TAIR10
Match: AT4G09640.1 (Protein of unknown function (DUF803)) HSP 1 Score: 302.4 bits (773), Expect = 3.0e-82 Identity = 164/251 (65.34%), Postives = 190/251 (75.70%), Query Frame = 0
BLAST of Carg13194 vs. TAIR10
Match: AT3G23870.1 (Protein of unknown function (DUF803)) HSP 1 Score: 270.0 bits (689), Expect = 1.7e-72 Identity = 142/243 (58.44%), Postives = 180/243 (74.07%), Query Frame = 0
BLAST of Carg13194 vs. TAIR10
Match: AT4G13800.1 (Protein of unknown function (DUF803)) HSP 1 Score: 264.2 bits (674), Expect = 9.1e-71 Identity = 142/245 (57.96%), Postives = 173/245 (70.61%), Query Frame = 0
BLAST of Carg13194 vs. Swiss-Prot
Match: sp|Q9LNK7|NIPA3_ARATH (Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana OX=3702 GN=At1g34470 PE=2 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 7.3e-86 Identity = 173/255 (67.84%), Postives = 198/255 (77.65%), Query Frame = 0
BLAST of Carg13194 vs. Swiss-Prot
Match: sp|Q94AH3|NIPA4_ARATH (Probable magnesium transporter NIPA4 OS=Arabidopsis thaliana OX=3702 GN=At1g71900 PE=2 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 8.1e-85 Identity = 171/251 (68.13%), Postives = 192/251 (76.49%), Query Frame = 0
BLAST of Carg13194 vs. Swiss-Prot
Match: sp|F4JKQ7|NIPA5_ARATH (Probable magnesium transporter NIPA5 OS=Arabidopsis thaliana OX=3702 GN=At4g09640 PE=2 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 5.4e-81 Identity = 164/251 (65.34%), Postives = 190/251 (75.70%), Query Frame = 0
BLAST of Carg13194 vs. Swiss-Prot
Match: sp|Q9LIR9|NIPA1_ARATH (Probable magnesium transporter NIPA1 OS=Arabidopsis thaliana OX=3702 GN=At3g23870 PE=2 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 3.0e-71 Identity = 142/243 (58.44%), Postives = 180/243 (74.07%), Query Frame = 0
BLAST of Carg13194 vs. Swiss-Prot
Match: sp|B3LFA3|NIPA2_ARATH (Probable magnesium transporter NIPA2 OS=Arabidopsis thaliana OX=3702 GN=At4g13800 PE=2 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.6e-69 Identity = 142/245 (57.96%), Postives = 173/245 (70.61%), Query Frame = 0
BLAST of Carg13194 vs. TrEMBL
Match: tr|A0A1S3C302|A0A1S3C302_CUCME (Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103496090 PE=3 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 1.8e-105 Identity = 217/268 (80.97%), Postives = 223/268 (83.21%), Query Frame = 0
BLAST of Carg13194 vs. TrEMBL
Match: tr|A0A0A0LAD9|A0A0A0LAD9_CUCSA (Probable magnesium transporter OS=Cucumis sativus OX=3659 GN=Csa_3G228350 PE=3 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 1.8e-105 Identity = 214/255 (83.92%), Postives = 219/255 (85.88%), Query Frame = 0
BLAST of Carg13194 vs. TrEMBL
Match: tr|A0A1S3C299|A0A1S3C299_CUCME (Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103496090 PE=3 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 3.1e-105 Identity = 214/255 (83.92%), Postives = 219/255 (85.88%), Query Frame = 0
BLAST of Carg13194 vs. TrEMBL
Match: tr|W9QDC5|W9QDC5_9ROSA (Probable magnesium transporter OS=Morus notabilis OX=981085 GN=L484_018446 PE=3 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 7.5e-96 Identity = 200/269 (74.35%), Postives = 215/269 (79.93%), Query Frame = 0
BLAST of Carg13194 vs. TrEMBL
Match: tr|I3T7G8|I3T7G8_LOTJA (Probable magnesium transporter OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 1.7e-95 Identity = 195/256 (76.17%), Postives = 207/256 (80.86%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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