Carg13032 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13032
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Leucine-rich repeat family protein / extensin family protein
Location	Cucurbita_argyrosperma_scaffold_052 : 746443 .. 747672 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTTCCCAATCGTCACTTGTCTCGTCTTCTTCCTCCTCACAAACACCCCTGCAACTGAAAGCTTCGGAGTAGACATCAATGGCGGAATCGGAATCGGCGTCACCATCGGCGGCGGTGGCGGAGGAGGAGGAGCAAGCGTTTGGATTGGGGGAAACAATGGACCCCAGACGCCGAGACTGAACAGAGCTTACACCGCACTCCAAGCATGGAAATCTGCCATTACAAGCGATCCATTAGGGATTTTACGAAGTTGGGTCGGCCCCAATGTGTGTTCTTACAAAGGGGTTTTTTGTGCACAAGTTGAAGACGAATCAACGTCGTCCCTCGTCGACATTATCGCCGGAATCGACCTGAATCATGCTAATCTCGCAGGTACTCTAGTGACAGAGCTCTCGTTTCTCACCGAAATCACTCTGTTTCATCTCAACAGCAACCGATTTTCCGGCACTGTGCCGGAATCCTTTAAAGAAATGTCATCACTTCAAGAATTGGACCTCAGCAACAACATGTTTTCAGGTCCATTTCCGATTGCCACATTATACATTCCAAATCTGGTGTATTTAGACCTGAGATTCAACGATTTCCACGGCCCAATTCCTGAAGATCTCTTCAACAAAAAACTAGATGCAATTTTCCTCAATAACAACCATTTCGAAGGCGAACTCCCTCAAAACCTGGGAAATTCCCCTGCTTCTGTGATTAATCTAGCTAACAACAAGCTAAGTGGCAATCTCCCAACTGGGTTTAGCCTCTTGGGTTCGACACTGAGAGAAATCTTGCTTTTAAACAACCAATTAACAGGGTGTATTCCAGAAGGATTCGGGCTTTTCTCTGAAATGCAAGTGTTGGATGTGAGCTTCAATTCGTTAATGGGTCATTTGCCGGACACTCTGTCTTGTTTAAACGAAATCCAGATCATGAATTTGGGACACAACAGGCTTTCTGGTGTTCTTCCGGATTTAATCTGTTCGTTGAAAAACTTGGTGAATCTGACGGTTTCTTTCAATTTCTTTTCTGGGTTGAGCCAAGAATGTTCGCGCCAATCTCTTGAGAATCTGGGCTTTGATTTCTCTGGAAATTGCATTCCTGGACGGGACATGCAGAGGCCTCGCCCTGAATGCTCTGTTCTTCCTGCTTCTGGGAGCTTGAATTGCCTTAGAATACCTCTTGTTTGTGGGACACTGGCTGATAGCCCAGACACTGATCCCAGTTCTTCATCGCCATGA

mRNA sequence

ATGAACTTCCCAATCGTCACTTGTCTCGTCTTCTTCCTCCTCACAAACACCCCTGCAACTGAAAGCTTCGGAGTAGACATCAATGGCGGAATCGGAATCGGCGTCACCATCGGCGGCGGTGGCGGAGGAGGAGGAGCAAGCGTTTGGATTGGGGGAAACAATGGACCCCAGACGCCGAGACTGAACAGAGCTTACACCGCACTCCAAGCATGGAAATCTGCCATTACAAGCGATCCATTAGGGATTTTACGAAGTTGGGTCGGCCCCAATGTGTGTTCTTACAAAGGGGTTTTTTGTGCACAAGTTGAAGACGAATCAACGTCGTCCCTCGTCGACATTATCGCCGGAATCGACCTGAATCATGCTAATCTCGCAGGTACTCTAGTGACAGAGCTCTCGTTTCTCACCGAAATCACTCTGTTTCATCTCAACAGCAACCGATTTTCCGGCACTGTGCCGGAATCCTTTAAAGAAATGTCATCACTTCAAGAATTGGACCTCAGCAACAACATGTTTTCAGGTCCATTTCCGATTGCCACATTATACATTCCAAATCTGGTGTATTTAGACCTGAGATTCAACGATTTCCACGGCCCAATTCCTGAAGATCTCTTCAACAAAAAACTAGATGCAATTTTCCTCAATAACAACCATTTCGAAGGCGAACTCCCTCAAAACCTGGGAAATTCCCCTGCTTCTGTGATTAATCTAGCTAACAACAAGCTAAGTGGCAATCTCCCAACTGGGTTTAGCCTCTTGGGTTCGACACTGAGAGAAATCTTGCTTTTAAACAACCAATTAACAGGGTGTATTCCAGAAGGATTCGGGCTTTTCTCTGAAATGCAAGTGTTGGATGTGAGCTTCAATTCGTTAATGGGTCATTTGCCGGACACTCTGTCTTGTTTAAACGAAATCCAGATCATGAATTTGGGACACAACAGGCTTTCTGGTGTTCTTCCGGATTTAATCTGTTCGTTGAAAAACTTGGTGAATCTGACGGTTTCTTTCAATTTCTTTTCTGGGTTGAGCCAAGAATGTTCGCGCCAATCTCTTGAGAATCTGGGCTTTGATTTCTCTGGAAATTGCATTCCTGGACGGGACATGCAGAGGCCTCGCCCTGAATGCTCTGTTCTTCCTGCTTCTGGGAGCTTGAATTGCCTTAGAATACCTCTTGTTTGTGGGACACTGGCTGATAGCCCAGACACTGATCCCAGTTCTTCATCGCCATGA

Coding sequence (CDS)

ATGAACTTCCCAATCGTCACTTGTCTCGTCTTCTTCCTCCTCACAAACACCCCTGCAACTGAAAGCTTCGGAGTAGACATCAATGGCGGAATCGGAATCGGCGTCACCATCGGCGGCGGTGGCGGAGGAGGAGGAGCAAGCGTTTGGATTGGGGGAAACAATGGACCCCAGACGCCGAGACTGAACAGAGCTTACACCGCACTCCAAGCATGGAAATCTGCCATTACAAGCGATCCATTAGGGATTTTACGAAGTTGGGTCGGCCCCAATGTGTGTTCTTACAAAGGGGTTTTTTGTGCACAAGTTGAAGACGAATCAACGTCGTCCCTCGTCGACATTATCGCCGGAATCGACCTGAATCATGCTAATCTCGCAGGTACTCTAGTGACAGAGCTCTCGTTTCTCACCGAAATCACTCTGTTTCATCTCAACAGCAACCGATTTTCCGGCACTGTGCCGGAATCCTTTAAAGAAATGTCATCACTTCAAGAATTGGACCTCAGCAACAACATGTTTTCAGGTCCATTTCCGATTGCCACATTATACATTCCAAATCTGGTGTATTTAGACCTGAGATTCAACGATTTCCACGGCCCAATTCCTGAAGATCTCTTCAACAAAAAACTAGATGCAATTTTCCTCAATAACAACCATTTCGAAGGCGAACTCCCTCAAAACCTGGGAAATTCCCCTGCTTCTGTGATTAATCTAGCTAACAACAAGCTAAGTGGCAATCTCCCAACTGGGTTTAGCCTCTTGGGTTCGACACTGAGAGAAATCTTGCTTTTAAACAACCAATTAACAGGGTGTATTCCAGAAGGATTCGGGCTTTTCTCTGAAATGCAAGTGTTGGATGTGAGCTTCAATTCGTTAATGGGTCATTTGCCGGACACTCTGTCTTGTTTAAACGAAATCCAGATCATGAATTTGGGACACAACAGGCTTTCTGGTGTTCTTCCGGATTTAATCTGTTCGTTGAAAAACTTGGTGAATCTGACGGTTTCTTTCAATTTCTTTTCTGGGTTGAGCCAAGAATGTTCGCGCCAATCTCTTGAGAATCTGGGCTTTGATTTCTCTGGAAATTGCATTCCTGGACGGGACATGCAGAGGCCTCGCCCTGAATGCTCTGTTCTTCCTGCTTCTGGGAGCTTGAATTGCCTTAGAATACCTCTTGTTTGTGGGACACTGGCTGATAGCCCAGACACTGATCCCAGTTCTTCATCGCCATGA

Protein sequence

MNFPIVTCLVFFLLTNTPATESFGVDINGGIGIGVTIGGGGGGGGASVWIGGNNGPQTPRLNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAGIDLNHANLAGTLVTELSFLTEITLFHLNSNRFSGTVPESFKEMSSLQELDLSNNMFSGPFPIATLYIPNLVYLDLRFNDFHGPIPEDLFNKKLDAIFLNNNHFEGELPQNLGNSPASVINLANNKLSGNLPTGFSLLGSTLREILLLNNQLTGCIPEGFGLFSEMQVLDVSFNSLMGHLPDTLSCLNEIQIMNLGHNRLSGVLPDLICSLKNLVNLTVSFNFFSGLSQECSRQSLENLGFDFSGNCIPGRDMQRPRPECSVLPASGSLNCLRIPLVCGTLADSPDTDPSSSSP

Homology

[Close]

BLAST of Carg13032 vs. NCBI nr
Match: XP_022987724.1 (leucine-rich repeat extensin-like protein 6 [Cucurbita maxima])

HSP 1 Score: 352.1 bits (902), Expect = 2.6e-93
Identity = 405/410 (98.78%), Postives = 406/410 (99.02%), Query Frame = 0


Query: 1   MNFPIVTCLVFFLLTNTPATESFGVDINGG-XXXXXXXXXXXXXXXXXXWIGGNNGPQTP 60
           MNFPIVTCLVFFLLTNTPATESFGVDINGG XXXXXXXXXXXXXXXXXXWIGGNN PQTP
Sbjct: 37  MNFPIVTCLVFFLLTNTPATESFGVDINGGXXXXXXXXXXXXXXXXXXXWIGGNNEPQTP 96

Query: 61  RLNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAGIDL 120
           RLNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAGIDL
Sbjct: 97  RLNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAGIDL 156

Query: 121 NHANLAGTLVTELSFLTEITLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           NHANLAGTLVTELSFLTEITLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 157 NHANLAGTLVTELSFLTEITLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 216

Query: 181 XXXXXXXXXXXXXXXXXXXXXXEDLFNKKLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXEDLFNKKLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 217 XXXXXXXXXXXXXXXXXXXXXXEDLFNKKLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 276

Query: 241 XXXXXXXXXXFSLLGSTLRXXXXXXXXXXXXXXXXXXXXXEMQVLDVSXXXXXXXXXXXX 300
           XXXXXXXXXXFSLLGSTLRXXXXXXXXXXXXXXXXXXXXXEMQVLDVSXXXXXXXXXXXX
Sbjct: 277 XXXXXXXXXXFSLLGSTLRXXXXXXXXXXXXXXXXXXXXXEMQVLDVSXXXXXXXXXXXX 336

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECSRQSLENLGFDFS 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ECSRQSLENLGFDFS
Sbjct: 337 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQECSRQSLENLGFDFS 396

Query: 361 GNCIPGRDMQRPRPECSVLPASGSLNCLRIPLVCGTLADSPDTDPSSSSP 410
           GNCIPGRDMQRP PECSVLPA+GSLNCLRIPLVCGTLADSPDTDPSSSSP
Sbjct: 397 GNCIPGRDMQRPHPECSVLPAAGSLNCLRIPLVCGTLADSPDTDPSSSSP 446

[Close]

BLAST of Carg13032 vs. NCBI nr
Match: XP_022960570.1 (leucine-rich repeat extensin-like protein 6 [Cucurbita moschata])

HSP 1 Score: 351.7 bits (901), Expect = 3.4e-93
Identity = 401/409 (98.04%), Postives = 404/409 (98.78%), Query Frame = 0


Query: 1   MNFPIVTCLVFFLLTNTPATESFGVDINGGXXXXXXXXXXXXXXXXXXWIGGNNGPQTPR 60
           MNFPIVTCLVFFLLTNTPATESF VDINGG XXXXXXXXXXXXXXXXXWIGGNNGPQTPR
Sbjct: 1   MNFPIVTCLVFFLLTNTPATESFVVDINGGIXXXXXXXXXXXXXXXXXWIGGNNGPQTPR 60

Query: 61  LNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAGIDLN 120
           LNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAGIDLN
Sbjct: 61  LNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAGIDLN 120

Query: 121 HANLAGTLVTELSFLTEITLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           HANLAGTLVTELSFLTEITLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 HANLAGTLVTELSFLTEITLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXEDLFNKKLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXEDLFNKKLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXEDLFNKKLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXFSLLGSTLRXXXXXXXXXXXXXXXXXXXXXEMQVLDVSXXXXXXXXXXXXX 300
           XXXXXXXXXFSLLGSTLRXXXXXXXXXXXXXXXXXXXXXEMQVLD+SXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXFSLLGSTLRXXXXXXXXXXXXXXXXXXXXXEMQVLDMSXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECSRQSLENLGFDFSG 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ECSRQSL NLGFDF+G
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQECSRQSLGNLGFDFTG 360

Query: 361 NCIPGRDMQRPRPECSVLPASGSLNCLRIPLVCGTLADSPDTDPSSSSP 410
           NCIPGRDMQRPRPECSV PA+GSLNCLRIPLVCGTLADSPDTDPSSSSP
Sbjct: 361 NCIPGRDMQRPRPECSVFPAAGSLNCLRIPLVCGTLADSPDTDPSSSSP 409

[Close]

BLAST of Carg13032 vs. NCBI nr
Match: XP_022931757.1 (leucine-rich repeat extensin-like protein 4 [Cucurbita moschata])

HSP 1 Score: 253.1 bits (645), Expect = 1.7e-63
Identity = 354/421 (84.09%), Postives = 372/421 (88.36%), Query Frame = 0


Query: 2   NFPIVTCLVFFLLTNTPATESFGVDINGGXXXXXXXXXXXXXXXXXXWIGGN-------- 61
           NFPI+TCL+FFLLTN  ATE+FGV +NGGXXXXXXXXXXXXXXXXXX             
Sbjct: 3   NFPILTCLIFFLLTNPNATETFGVGVNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTP 62

Query: 62  NGPQTPRLNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDI 121
           +GP TPRLNR Y ALQAWKSAITSDPLGIL SWVGPNVCSYKGVFCAQV+DE TSS VDI
Sbjct: 63  SGPPTPRLNRGYAALQAWKSAITSDPLGILSSWVGPNVCSYKGVFCAQVQDEMTSSPVDI 122

Query: 122 IAGIDLNHANLAGTLVTELSFLTEITLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
           IAGIDLNHANLAGTLV +LS+LTEITL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 123 IAGIDLNHANLAGTLVNQLSYLTEITLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182

Query: 182 XXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLFNKKLDAXXXXXXXXXXXXXXXXXXXXXX 241
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXED+FNKKLDA XXXXXXXXXXXXXXXXXXXXX
Sbjct: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXEDIFNKKLDAIXXXXXXXXXXXXXXXXXXXXX 242

Query: 242 XXXXXXXXXXXXXXXXFSLLGSTLRXXXXXXXXXXXXXXXXXXXXXEMQVLDVSXXXXXX 301
           XXXXXXXXXXXXXXXX   LGS+L+   XXXXXXXXXXXXXXXXX EMQV DVS XXXXX
Sbjct: 243 XXXXXXXXXXXXXXXXXXXLGSSLKEILXXXXXXXXXXXXXXXXXSEMQVFDVSFXXXXX 302

Query: 302 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECSRQSLEN 361
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECS   L N
Sbjct: 303 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECSHHFLGN 362

Query: 362 LGFDFSGNCIPGRDMQRPRPECSVLPASGSLNCLRI-----PLVCGTLADSPDTDPSSSS 410
           LGFDFSGNCIPGR+MQRP PECS++P  GSLNCLR+     PLVCGTLA++ D+D  SSS
Sbjct: 363 LGFDFSGNCIPGRNMQRPPPECSMIP-GGSLNCLRLPPVVKPLVCGTLAETTDSDHPSSS 422

[Close]

BLAST of Carg13032 vs. NCBI nr
Match: XP_023515395.1 (leucine-rich repeat extensin-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.9 bits (642), Expect = 3.7e-63
Identity = 364/409 (89.00%), Postives = 364/409 (89.00%), Query Frame = 0


Query: 1   MNFPIVTCLVFFLLTNTPATESFGVDINGGXXXXXXXXXXXXXXXXXXWIGGNNGPQTPR 60
           MNFPIVTCLVFFLLTNTPATESFGVDINGG  XXXXXXXXXXXXXXXXWIGGNN PQTPR
Sbjct: 1   MNFPIVTCLVFFLLTNTPATESFGVDINGG-IXXXXXXXXXXXXXXXXWIGGNNRPQTPR 60

Query: 61  LNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAGIDLN 120
           LNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAGIDLN
Sbjct: 61  LNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAGIDLN 120

Query: 121 HANLAGTLVTELSFLTEITLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           HANLAGTLVTELSFLTEITLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 HANLAGTLVTELSFLTEITLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXEDLFNKKLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXEDLFNKKLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXEDLFNKKLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXFSLLGSTLRXXXXXXXXXXXXXXXXXXXXXEMQVLDVSXXXXXXXXXXXXX 300
           XXXXXXXXXFSLLGSTLRXXXXXXXXXXXXXXXXXXXXXEMQVLDVSXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXFSLLGSTLRXXXXXXXXXXXXXXXXXXXXXEMQVLDVSXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECSRQSLENLGFDFSG 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 NCIPGRDMQRPRPECSVLPASGSLNCLRIPLVCGTLADSPDTDPSSSSP 410
                                    CLRIPLVCG LADSPDTDPSSSSP
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXCLRIPLVCGALADSPDTDPSSSSP 408

[Close]

BLAST of Carg13032 vs. NCBI nr
Match: XP_023531330.1 (leucine-rich repeat extensin-like protein 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.5 bits (641), Expect = 4.8e-63
Identity = 353/421 (83.85%), Postives = 372/421 (88.36%), Query Frame = 0


Query: 2   NFPIVTCLVFFLLTNTPATESFGVDINGGXXXXXXXXXXXXXXXXXXWIGGN-------- 61
           +FPI+TCL+FFLLTN  ATE+FGV +NGGXXXXXXXXXXXXXXXXXX             
Sbjct: 3   SFPILTCLIFFLLTNPTATETFGVGVNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTP 62

Query: 62  NGPQTPRLNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDI 121
           +GP TPRLNR Y ALQAWKSAITSDPLGIL SWVGPNVCSYKGVFCAQV+DE TSS VDI
Sbjct: 63  SGPPTPRLNRGYAALQAWKSAITSDPLGILSSWVGPNVCSYKGVFCAQVQDEMTSSPVDI 122

Query: 122 IAGIDLNHANLAGTLVTELSFLTEITLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
           IAGIDLNHANLAGTLV +LS+LTEITL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 123 IAGIDLNHANLAGTLVNQLSYLTEITLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182

Query: 182 XXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLFNKKLDAXXXXXXXXXXXXXXXXXXXXXX 241
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXED+FNKKLDA XXXXXXXXXXXXXXXXXXXXX
Sbjct: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXEDIFNKKLDAIXXXXXXXXXXXXXXXXXXXXX 242

Query: 242 XXXXXXXXXXXXXXXXFSLLGSTLRXXXXXXXXXXXXXXXXXXXXXEMQVLDVSXXXXXX 301
           XXXXXXXXXXXXXXXX   LGS+L+   XXXXXXXXXXXXXXXXX EMQV DVS XXXXX
Sbjct: 243 XXXXXXXXXXXXXXXXXXXLGSSLKEILXXXXXXXXXXXXXXXXXSEMQVFDVSFXXXXX 302

Query: 302 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECSRQSLEN 361
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECS   L N
Sbjct: 303 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECSHHFLGN 362

Query: 362 LGFDFSGNCIPGRDMQRPRPECSVLPASGSLNCLRI-----PLVCGTLADSPDTDPSSSS 410
           LGFDFSGNCIPGR+MQRP PECS++P  GSLNCLR+     PLVCGTLA++ D+D  SSS
Sbjct: 363 LGFDFSGNCIPGRNMQRPPPECSMIP-GGSLNCLRLPPVVKPLVCGTLAETTDSDHPSSS 422

[Close]

BLAST of Carg13032 vs. TAIR10
Match: AT4G29240.1 (Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 100.9 bits (250), Expect = 1.9e-21
Identity = 252/353 (71.39%), Postives = 281/353 (79.60%), Query Frame = 0


Query: 51  GGNNG--PQTPRLNR-AYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDEST 110
           GGN    P +   NR AY ALQ WKSA+  DP  +L++WVG +VCSYKGVFC+       
Sbjct: 60  GGNRNAVPGSSAPNRVAYNALQVWKSAMREDPSNVLKTWVGSDVCSYKGVFCSG------ 119

Query: 111 SSLVDIIAGIDLNHANLAGTLVTELSFLTEITLXXXXXXXXXXXXXXXXXXXXXXXXXXX 170
                 I  IDLNHANL GTLV +L+ L+++ +XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 120 ----QSITSIDLNHANLKGTLVKDLALLSDLNIXXXXXXXXXXXXXXXXXXXXXXXXXXX 179

Query: 171 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLFNKKLDAXXXXXXXXXXXXXXXX 230
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE+LFNK+LDA  XXXXXXXXXXXXXX
Sbjct: 180 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEELFNKRLDAILXXXXXXXXXXXXXX 239

Query: 231 XXXXXXXXXXXXXXXXXXXXXXFSLLGSTLRXXXXXXXXXXXXXXXXXXXXXEMQVLDVS 290
           XXXXXXXXXXXXXXXXXXXXXX    GS ++    XXXXXXXXXXXX     E++V DVS
Sbjct: 240 XXXXXXXXXXXXXXXXXXXXXXXXXXGSRVKEVLLXXXXXXXXXXXXVGMFSEIEVFDVS 299

Query: 291 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECS 350
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ECS
Sbjct: 300 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSECS 359

Query: 351 RQSLENLGFDFSGNCIPGRDMQRPRPECSVLPASGSLNCLRI---PLVCGTLA 398
             S  + GFDF GNCIPGR+ QRP+P+CS   + G+++C RI   PL C  ++
Sbjct: 360 --SRVSFGFDFVGNCIPGRNSQRPQPDCSGY-SGGAMSCFRIPTQPLACAAIS 399

[Close]

BLAST of Carg13032 vs. TAIR10
Match: AT2G19780.1 (Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 99.4 bits (246), Expect = 5.6e-21
Identity = 250/344 (72.67%), Postives = 274/344 (79.65%), Query Frame = 0


Query: 57  QTPRLNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAG 116
           Q    N AY ALQ+WKSAIT DP G+L++WVG +VCSY+GVFC      S SS    I  
Sbjct: 64  QQQTTNAAYNALQSWKSAITEDPSGVLKTWVGEDVCSYRGVFC------SGSS----ITS 123

Query: 117 IDLNHANLAGTLVTELSFLTEITLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 176
           IDLN ANL GT+V +LS L     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 124 IDLNKANLKGTIVKDLSLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 177 XXXXXXXXXXXXXXXXXXXXXXXXXEDLFNKKLDAXXXXXXXXXXXXXXXXXXXXXXXXX 236
           XXXXXXXXXXXXXXXXXXXXXXXXX +LFNK+LDA  XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXNLFNKQLDAILXXXXXXXXXXXXXXXXXXXXXXX 243

Query: 237 XXXXXXXXXXXXXFSLLGSTLRXXXXXXXXXXXXXXXXXXXXXEMQVLDVSXXXXXXXXX 296
           XXXXXXXXXXXXX    GS L+     XXXXXXXXXXXXX   +++V DVS XXXXXXXX
Sbjct: 244 XXXXXXXXXXXXXXXXXGSKLKEVLFLXXXXXXXXXXXXXLFSDIEVFDVSFXXXXXXXX 303

Query: 297 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECSRQSLENLGF 356
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +CS  S   +GF
Sbjct: 304 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSSQCSSLS---VGF 363

Query: 357 DFSGNCIPGRDMQRPRPECSVLPASGSLNCLRI---PLVCGTLA 398
           DF+GNCIPG+  QRP+P+CS +P  G L+C RI   PL C  ++
Sbjct: 364 DFTGNCIPGKGYQRPQPDCSAIP-GGQLSCFRIPAQPLTCAAIS 393

[Close]

BLAST of Carg13032 vs. TAIR10
Match: AT3G19020.1 (Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 97.4 bits (241), Expect = 2.1e-20
Identity = 47/81 (58.02%), Postives = 57/81 (70.37%), Query Frame = 0


Query: 60  RLNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAGIDL 119
           RL RAY ALQAWK A  SDP     +WVGP+VCSYKGVFCA   D+ +   V ++AGIDL
Sbjct: 71  RLKRAYIALQAWKKAFYSDPFNTAANWVGPDVCSYKGVFCAPALDDPS---VLVVAGIDL 130

Query: 120 NHANLAGTLVTELSFLTEITL 141
           NHA++AG L  EL  LT++ L
Sbjct: 131 NHADIAGYLPPELGLLTDVAL 148

[Close]

BLAST of Carg13032 vs. TAIR10
Match: AT3G22800.1 (Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 95.9 bits (237), Expect = 6.1e-20
Identity = 47/80 (58.75%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 59  PRLNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAGID 118
           PRL +A+TALQAWK  ITSDP G   +W GPNVC+Y GVFCA   D   +  V  +AGID
Sbjct: 49  PRLLKAFTALQAWKFTITSDPNGFTSNWCGPNVCNYTGVFCAPALD---NPYVLTVAGID 108

Query: 119 LNHANLAGTLVTELSFLTEI 139
           LNHAN+AG L  EL  LT++
Sbjct: 109 LNHANIAGYLPLELGLLTDL 125

[Close]

BLAST of Carg13032 vs. TAIR10
Match: AT3G24480.1 (Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 92.0 bits (227), Expect = 8.9e-19
Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 57  QTPRLNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAG 116
           + PRL  AY ALQAWK AI SDP  I  +W+G NVC+Y GVFC++  D   +  +  +AG
Sbjct: 70  ENPRLRSAYIALQAWKQAILSDPNNITVNWIGSNVCNYTGVFCSKALD---NRKIRTVAG 129

Query: 117 IDLNHANLAGTLVTELSFLTEITL 141
           IDLNHA++AG L  EL  LT++ L
Sbjct: 130 IDLNHADIAGYLPEELGLLTDLAL 150

[Close]

BLAST of Carg13032 vs. Swiss-Prot
Match: sp|Q9LJ64|PLRX1_ARATH (Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PEX1 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.8e-19
Identity = 47/81 (58.02%), Postives = 57/81 (70.37%), Query Frame = 0


Query: 60  RLNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAGIDL 119
           RL RAY ALQAWK A  SDP     +WVGP+VCSYKGVFCA   D+ +   V ++AGIDL
Sbjct: 71  RLKRAYIALQAWKKAFYSDPFNTAANWVGPDVCSYKGVFCAPALDDPS---VLVVAGIDL 130

Query: 120 NHANLAGTLVTELSFLTEITL 141
           NHA++AG L  EL  LT++ L
Sbjct: 131 NHADIAGYLPPELGLLTDVAL 148

[Close]

BLAST of Carg13032 vs. Swiss-Prot
Match: sp|Q9LUI1|LRX6_ARATH (Leucine-rich repeat extensin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=LRX6 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.1e-18
Identity = 47/80 (58.75%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 59  PRLNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAGID 118
           PRL +A+TALQAWK  ITSDP G   +W GPNVC+Y GVFCA   D   +  V  +AGID
Sbjct: 49  PRLLKAFTALQAWKFTITSDPNGFTSNWCGPNVCNYTGVFCAPALD---NPYVLTVAGID 108

Query: 119 LNHANLAGTLVTELSFLTEI 139
           LNHAN+AG L  EL  LT++
Sbjct: 109 LNHANIAGYLPLELGLLTDL 125

[Close]

BLAST of Carg13032 vs. Swiss-Prot
Match: sp|Q9LHF1|LRX4_ARATH (Leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=LRX4 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.6e-17
Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 57  QTPRLNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAG 116
           + PRL  AY ALQAWK AI SDP  I  +W+G NVC+Y GVFC++  D   +  +  +AG
Sbjct: 70  ENPRLRSAYIALQAWKQAILSDPNNITVNWIGSNVCNYTGVFCSKALD---NRKIRTVAG 129

Query: 117 IDLNHANLAGTLVTELSFLTEITL 141
           IDLNHA++AG L  EL  LT++ L
Sbjct: 130 IDLNHADIAGYLPEELGLLTDLAL 150

[Close]

BLAST of Carg13032 vs. Swiss-Prot
Match: sp|Q9XIB6|PLRX2_ARATH (Pollen-specific leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PEX2 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.1e-17
Identity = 42/84 (50.00%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 57  QTPRLNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAG 116
           +  RL RAY ALQAWK AI SDP     +WVG +VCSY GV+CA   D+ +   + ++AG
Sbjct: 55  ENDRLKRAYIALQAWKKAIYSDPFKTTANWVGSDVCSYNGVYCAPALDDDS---LTVVAG 114

Query: 117 IDLNHANLAGTLVTELSFLTEITL 141
           +DLNHA++AG L  EL  +T++ L
Sbjct: 115 VDLNHADIAGHLPPELGLMTDLAL 135

[Close]

BLAST of Carg13032 vs. Swiss-Prot
Match: sp|Q9SN46|LRX5_ARATH (Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=LRX5 PE=2 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 6.1e-17
Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 57  QTPRLNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAG 116
           + PRL  AY ALQAWK AI SDP     +W+G +VCSY GV+CA   D   +  +  +AG
Sbjct: 74  ENPRLRNAYIALQAWKQAILSDPNNFTTNWIGSDVCSYTGVYCAPALD---NRRIRTVAG 133

Query: 117 IDLNHANLAGTLVTELSFLTEITL 141
           IDLNHA++AG L  EL  LT++ L
Sbjct: 134 IDLNHADIAGYLPQELGLLTDLAL 154

[Close]

BLAST of Carg13032 vs. TrEMBL
Match: tr|A0A1S3BQ04|A0A1S3BQ04_CUCME (leucine-rich repeat extensin-like protein 4 OS=Cucumis melo OX=3656 GN=LOC103492275 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 5.8e-57
Identity = 344/417 (82.49%), Postives = 365/417 (87.53%), Query Frame = 0


Query: 3   FPIVTCLVFFLLTNTPATESFGVDINGGXXXXXXXXXXXXXXXXXXWIGGNNGPQTPRLN 62
           FP +T L+FF++TN+P T+SF V +NGG XXXXXXXXXXXXXXXXX     +   TPRLN
Sbjct: 4   FPFLTSLLFFIVTNSPPTKSFEVAVNGGIXXXXXXXXXXXXXXXXXXXXXXS--PTPRLN 63

Query: 63  RAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAGIDLNHA 122
           RAYTALQ+WKSAITSDPLGIL +WVGPNVCSY+GVFCAQV+DE+TSS VDI+AGIDLNHA
Sbjct: 64  RAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHA 123

Query: 123 NLAGTLVTELSFLTEITLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
           NL GTLV ELSFLTEITL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 124 NLGGTLVKELSFLTEITLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 183 XXXXXXXXXXXXXXXXXXXEDLFNKKLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           XXXXXXXXXXXXXXXXXXX DLFNKKLDA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 184 XXXXXXXXXXXXXXXXXXXXDLFNKKLDAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 243

Query: 243 XXXXXXXFSLLGSTLRXXXXXXXXXXXXXXXXXXXXXEMQVLDVSXXXXXXXXXXXXXXX 302
           XXXXXXX  LLGSTLR  XXXXXXXXXXXXXXXXX  EMQV DVS XXXXXXXXXXXXXX
Sbjct: 244 XXXXXXXXXLLGSTLREIXXXXXXXXXXXXXXXXXFSEMQVFDVSFXXXXXXXXXXXXXX 303

Query: 303 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECSRQS-----LENLGFD 362
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS  S     + NLGFD
Sbjct: 304 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSSSSRNNVVGNLGFD 363

Query: 363 FSGNCIPGRDMQRPRPECSVLPASGSLNCLRI-----PLVCGTLADSPDTDPSSSSP 410
           FSGNCIPG+D+QRPRPEC+V+P  GSLNC RI     PLVCGTL    ++D SSS P
Sbjct: 364 FSGNCIPGKDLQRPRPECNVIP-GGSLNCFRIPSIVKPLVCGTLGGRTESDLSSSPP 417

[Close]

BLAST of Carg13032 vs. TrEMBL
Match: tr|A0A0A0LWP9|A0A0A0LWP9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G575090 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 9.3e-55
Identity = 338/416 (81.25%), Postives = 356/416 (85.58%), Query Frame = 0


Query: 2   NFPIVTCLVFFLLTNTPATESFGVDINGGXXXXXXXXXXXXXXXXXXWIGGNNGPQTPRL 61
           NF  +T L+FF+LTN+PAT SF V +NGG       XXXXXXXXXXX         TPRL
Sbjct: 24  NFSFLTSLLFFILTNSPATRSFEVAVNGG---IGVGXXXXXXXXXXXXXXXXXXXPTPRL 83

Query: 62  NRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQVEDESTSSLVDIIAGIDLNH 121
           NRAYTALQ+WKSAITSDPLGIL +WVGPNVCSY+GVFCAQV+DE+TSS VDI+AGIDLNH
Sbjct: 84  NRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNH 143

Query: 122 ANLAGTLVTELSFLTEITLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
           ANL GTLV ELSFLTEITL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 144 ANLGGTLVKELSFLTEITLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 203

Query: 182 XXXXXXXXXXXXXXXXXXXXEDLFNKKLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 241
           XXXXXXXXXXXXXXXXXXXX DLFNKKLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 204 XXXXXXXXXXXXXXXXXXXXXDLFNKKLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 263

Query: 242 XXXXXXXXFSLLGSTLRXXXXXXXXXXXXXXXXXXXXXEMQVLDVS--XXXXXXXXXXXX 301
           XXXXXXXX  LLGST+R   XXXXXXXXXXXXXXX   EMQV DVS  XXXXXXXXXXXX
Sbjct: 264 XXXXXXXXXXLLGSTIREILXXXXXXXXXXXXXXXFFSEMQVFDVSFXXXXXXXXXXXXX 323

Query: 302 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECSRQS-LENLGFDF 361
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  SR + L NLGFDF
Sbjct: 324 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRNNVLGNLGFDF 383

Query: 362 SGNCIPGRDMQRPRPECSVLPASGSLNCLRI-----PLVCGTLADSPDTDPSSSSP 410
           SGNCIPG+D QRPRPEC+ +P  GSLNC RI     PLVCGTL    ++D SSS P
Sbjct: 384 SGNCIPGKDSQRPRPECNAIP-GGSLNCFRIPSLVKPLVCGTLGGRTESDLSSSPP 435

[Close]

BLAST of Carg13032 vs. TrEMBL
Match: tr|A0A1U8AIS1|A0A1U8AIS1_NELNU (leucine-rich repeat extensin-like protein 4 OS=Nelumbo nucifera OX=4432 GN=LOC104604462 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.4e-39
Identity = 266/370 (71.89%), Postives = 299/370 (80.81%), Query Frame = 0


Query: 49  WIGGNNGPQTP------RLNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQV 108
           W+GG   P+TP      RL+ AYTALQAWKSAIT DPLGIL SWVG NVCSYKGVFC   
Sbjct: 40  WVGGGINPRTPSGSPNSRLSNAYTALQAWKSAITDDPLGILHSWVGNNVCSYKGVFCVDP 99

Query: 109 EDESTSSLVDIIAGIDLNHANLAGTLVTELSFLTEITLXXXXXXXXXXXXXXXXXXXXXX 168
           ++E + +   ++AGIDLNHANL GTLV ELS L+++TL XXXXXXXXXXXXXXXXXXXXX
Sbjct: 100 QEEMSGAPGLVVAGIDLNHANLQGTLVKELSLLSDLTLLXXXXXXXXXXXXXXXXXXXXX 159

Query: 169 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLFNKKLDAXXXXXXXXXXX 228
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +LFNK+LDA XXXXXXXXXX
Sbjct: 160 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELFNKRLDAIXXXXXXXXXX 219

Query: 229 XXXXXXXXXXXXXXXXXXXXXXXXXXXFSLLGSTLRXXXXXXXXXXXXXXXXXXXXXEMQ 288
           XXXXXXXXXXXXXXXXXXXXXXXXXXX    G+ L+                     +++
Sbjct: 220 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTALKEVLFLNNQLTGCIPEGVGFLTQVE 279

Query: 289 VLDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 348
           V+DVS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 280 VMDVSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 339

Query: 349 XXECSRQSLENLGFDFSGNCIPGRDMQRPRPECSVLPASGSLNCLRI----PLVCGTLAD 408
             EC++    N+GFDFSGNCIPG++MQRP+PECSV+P  G L+CLRI    PLVCG++  
Sbjct: 340 SQECTKLFFRNVGFDFSGNCIPGKNMQRPQPECSVIPGDG-LSCLRIPSPRPLVCGSIDQ 399

[Close]

BLAST of Carg13032 vs. TrEMBL
Match: tr|V7C6E8|V7C6E8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G174100g PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.4e-39
Identity = 275/373 (73.73%), Postives = 298/373 (79.89%), Query Frame = 0


Query: 49  WIGGN-NGPQ-----TPRLNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQV 108
           W+GG  N P+      P+   AYTALQAWKSAIT DPL IL SWVGPNVCSYKGVFCA  
Sbjct: 56  WVGGGINSPEPPGSSVPKPEGAYTALQAWKSAITEDPLNILESWVGPNVCSYKGVFCANP 115

Query: 109 EDESTSSLVDIIAGIDLNHANLAGTLVTELSFLTEITLXXXXXXXXXXXXXXXXXXXXXX 168
           +DE  +S   ++AGIDLNHANL GTLV ELS L++++LXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 116 QDEMVASAFSVVAGIDLNHANLQGTLVKELSLLSDLSLXXXXXXXXXXXXXXXXXXXXXX 175

Query: 169 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLFNKKLDAXXXXXXXXXXX 228
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE+LF+K LDAXXXXXXXXXXX
Sbjct: 176 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEELFSKNLDAXXXXXXXXXXX 235

Query: 229 XXXXXXXXXXXXXXXXXXXXXXXXXXXFSLLGSTLRXXXXXXXXXXXXXXXXXXXXXEMQ 288
           XXXXXXXXXXXXXXXXXXXXXXXXXXX    GS ++                     EMQ
Sbjct: 236 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKIKEILFLNNQLTGCIPEGVGLFTEMQ 295

Query: 289 VLDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 348
           VLDVS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 296 VLDVSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF 355

Query: 349 XXECSRQSLENLGFDFSGNCIPGRDMQRPRPECSVLPASGSLNCLRIP----LVCGTLA- 408
             +CSR    N+GFDFS NCIPGRDMQRP+PECS++P  GSL+CLRIP    LVCG++A 
Sbjct: 356 SQQCSRLFFRNVGFDFSLNCIPGRDMQRPQPECSMIP-GGSLSCLRIPTPRSLVCGSMAV 415

Query: 409 -DSPDTDPSSSSP 410
             S   DP S SP
Sbjct: 416 SKSKHIDPISPSP 427

[Close]

BLAST of Carg13032 vs. TrEMBL
Match: tr|A0A0L9VGQ5|A0A0L9VGQ5_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g005500 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 2.7e-38
Identity = 253/368 (68.75%), Postives = 277/368 (75.27%), Query Frame = 0


Query: 49  WIGGN-NGPQ-----TPRLNRAYTALQAWKSAITSDPLGILRSWVGPNVCSYKGVFCAQV 108
           W+GG  N P+      P+   AYTALQAWKSAIT DPL +L SWVGPNVCSYKGVFCA  
Sbjct: 56  WVGGGINSPEPPGYSVPKPEGAYTALQAWKSAITEDPLNVLESWVGPNVCSYKGVFCANP 115

Query: 109 EDESTSSLVDIIAGIDLNHANLAGTLVTELSFLTEITLXXXXXXXXXXXXXXXXXXXXXX 168
           +DE  +S   ++AGIDLNHANL GTLV ELS L++++L                  XXXX
Sbjct: 116 QDEMVASAFPVVAGIDLNHANLKGTLVKELSLLSDLSLLHLNTNRFTGSVPDTFREXXXX 175

Query: 169 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLFNKKLDAXXXXXXXXXXX 228
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE+LF+K LD XXXXXXXXXXX
Sbjct: 176 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEELFSKNLDXXXXXXXXXXXX 235

Query: 229 XXXXXXXXXXXXXXXXXXXXXXXXXXXFSLLGSTLRXXXXXXXXXXXXXXXXXXXXXEMQ 288
           XXXXXXXXXXXXXXXXXXXXXXXXXXX    GS ++                     EMQ
Sbjct: 236 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKIKEILFLNNQLTGCIPEGVGLFTEMQ 295

Query: 289 VLDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 348
           VLDVS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 296 VLDVSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF 355

Query: 349 XXECSRQSLENLGFDFSGNCIPGRDMQRPRPECSVLPASGSLNCLRI----PLVCGTLA- 405
             +CSR    N+GFDFS NCIPGRDMQRP+PECSV+P  GSL+CLRI    PLVCG++A 
Sbjct: 356 SQQCSRLFFRNVGFDFSLNCIPGRDMQRPQPECSVIP-GGSLSCLRIPTPRPLVCGSMAV 415

The following BLAST results are available for this feature:

BLAST of Carg13032 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022987724.1	2.6e-93	98.78	leucine-rich repeat extensin-like protein 6 [Cucurbita maxima]	[more]
XP_022960570.1	3.4e-93	98.04	leucine-rich repeat extensin-like protein 6 [Cucurbita moschata]	[more]
XP_022931757.1	1.7e-63	84.09	leucine-rich repeat extensin-like protein 4 [Cucurbita moschata]	[more]
XP_023515395.1	3.7e-63	89.00	leucine-rich repeat extensin-like protein 6 [Cucurbita pepo subsp. pepo]	[more]
XP_023531330.1	4.8e-63	83.85	leucine-rich repeat extensin-like protein 4 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg13032 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G29240.1	1.9e-21	71.39	Leucine-rich repeat (LRR) family protein	[more]
AT2G19780.1	5.6e-21	72.67	Leucine-rich repeat (LRR) family protein	[more]
AT3G19020.1	2.1e-20	58.02	Leucine-rich repeat (LRR) family protein	[more]
AT3G22800.1	6.1e-20	58.75	Leucine-rich repeat (LRR) family protein	[more]
AT3G24480.1	8.9e-19	52.38	Leucine-rich repeat (LRR) family protein	[more]

BLAST of Carg13032 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LJ64\|PLRX1_ARATH	3.8e-19	58.02	Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thali...	[more]
sp\|Q9LUI1\|LRX6_ARATH	1.1e-18	58.75	Leucine-rich repeat extensin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
sp\|Q9LHF1\|LRX4_ARATH	1.6e-17	52.38	Leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
sp\|Q9XIB6\|PLRX2_ARATH	2.1e-17	50.00	Pollen-specific leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thali...	[more]
sp\|Q9SN46\|LRX5_ARATH	6.1e-17	51.19	Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]

BLAST of Carg13032 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BQ04\|A0A1S3BQ04_CUCME	5.8e-57	82.49	leucine-rich repeat extensin-like protein 4 OS=Cucumis melo OX=3656 GN=LOC103492...	[more]
tr\|A0A0A0LWP9\|A0A0A0LWP9_CUCSA	9.3e-55	81.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G575090 PE=4 SV=1	[more]
tr\|A0A1U8AIS1\|A0A1U8AIS1_NELNU	1.4e-39	71.89	leucine-rich repeat extensin-like protein 4 OS=Nelumbo nucifera OX=4432 GN=LOC10...	[more]
tr\|V7C6E8\|V7C6E8_PHAVU	1.4e-39	73.73	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G174100g PE=4 ...	[more]
tr\|A0A0L9VGQ5\|A0A0L9VGQ5_PHAAN	2.7e-38	68.75	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g005500 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR032675	LRR_dom_sf
IPR001611	Leu-rich_rpt
IPR013210	LRR_N_plant-typ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13032-RA	Carg13032-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	PFAM	PF08263	LRRNT_2	coord: 63..99 e-value: 4.4E-7 score: 30.0
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 139..196 e-value: 6.3E-9 score: 35.4
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 230..363 e-value: 1.2E-21 score: 79.0 coord: 60..229 e-value: 3.8E-36 score: 126.3
None	No IPR available	PANTHER	PTHR32093:SF86	EXTENSIN-LIKE PROTEIN-RELATED	coord: 8..400
None	No IPR available	PANTHER	PTHR32093	FAMILY NOT NAMED	coord: 8..400
None	No IPR available	SUPERFAMILY	SSF52058	L domain-like	coord: 64..356

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg13032	Cla016808	Watermelon (97103) v1	carwmB0093
Carg13032	Cla011249	Watermelon (97103) v1	carwmB0090
Carg13032	Csa1G575090	Cucumber (Chinese Long) v2	carcuB0101
Carg13032	Csa2G000710	Cucumber (Chinese Long) v2	carcuB0102
Carg13032	MELO3C004602	Melon (DHL92) v3.5.1	carmeB0097
Carg13032	MELO3C015426	Melon (DHL92) v3.5.1	carmeB0096
Carg13032	ClCG03G016010	Watermelon (Charleston Gray)	carwcgB0094
Carg13032	ClCG11G001990	Watermelon (Charleston Gray)	carwcgB0093
Carg13032	CSPI01G27690	Wild cucumber (PI 183967)	carcpiB0106
Carg13032	CSPI02G00690	Wild cucumber (PI 183967)	carcpiB0107
Carg13032	Cucsa.288690	Cucumber (Gy14) v1	carcgyB0114
Carg13032	Cucsa.116780	Cucumber (Gy14) v1	carcgyB0111
Carg13032	CmaCh10G006800	Cucurbita maxima (Rimu)	carcmaB0119
Carg13032	CmaCh11G006600	Cucurbita maxima (Rimu)	carcmaB0120
Carg13032	CmaCh05G013770	Cucurbita maxima (Rimu)	carcmaB0125
Carg13032	CmoCh11G006720	Cucurbita moschata (Rifu)	carcmoB0129
Carg13032	CmoCh10G007080	Cucurbita moschata (Rifu)	carcmoB0128
Carg13032	Lsi11G002110	Bottle gourd (USVL1VR-Ls)	carlsiB083
Carg13032	Lsi06G002310	Bottle gourd (USVL1VR-Ls)	carlsiB086
Carg13032	Cp4.1LG11g11540	Cucurbita pepo (Zucchini)	carcpeB0135
Carg13032	Cp4.1LG04g10450	Cucurbita pepo (Zucchini)	carcpeB0141
Carg13032	Cp4.1LG18g03820	Cucurbita pepo (Zucchini)	carcpeB0138
Carg13032	CsGy1G026910	Cucumber (Gy14) v2	carcgybB0101
Carg13032	CsGy2G000650	Cucumber (Gy14) v2	carcgybB0102
Carg13032	MELO3C015426.2	Melon (DHL92) v3.6.1	carmedB0098
Carg13032	MELO3C004602.2	Melon (DHL92) v3.6.1	carmedB0099
Carg13032	CsaV3_1G039950	Cucumber (Chinese Long) v3	carcucB0109
Carg13032	CsaV3_2G001730	Cucumber (Chinese Long) v3	carcucB0110
Carg13032	Cla97C11G208380	Watermelon (97103) v2	carwmbB0093
Carg13032	Cla97C03G066310	Watermelon (97103) v2	carwmbB0094
Carg13032	Bhi06G001446	Wax gourd	carwgoB0106
Carg13032	Bhi02G001615	Wax gourd	carwgoB0110

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg13032	Carg12252	Silver-seed gourd	carcarB038
Carg13032	Carg10825	Silver-seed gourd	carcarB104

The following block(s) are covering this gene:


Gene	Organism	Block
Carg13032	Silver-seed gourd	carcarB102
Carg13032	Silver-seed gourd	carcarB108
Carg13032	Cucurbita maxima (Rimu)	carcmaB0121
Carg13032	Cucurbita maxima (Rimu)	carcmaB0124
Carg13032	Cucurbita moschata (Rifu)	carcmoB0130
Carg13032	Cucurbita moschata (Rifu)	carcmoB0132
Carg13032	Cucurbita moschata (Rifu)	carcmoB0134
Carg13032	Cucurbita pepo (Zucchini)	carcpeB0140
Carg13032	Cucurbita pepo (Zucchini)	carcpeB0143
Carg13032	Bottle gourd (USVL1VR-Ls)	carlsiB087
Carg13032	Watermelon (97103) v1	carwmB0091
Carg13032	Watermelon (97103) v2	carwmbB0096
Carg13032	Wax gourd	carwgoB0107