Carg13024 (gene) Silver-seed gourd

Overview
NameCarg13024
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionMeiotic nuclear division protein 1 homolog
LocationCucurbita_argyrosperma_scaffold_052 : 709989 .. 712527 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGTTCATTTGTTACAATCGTAGCCATACTTATTTCATCATCCGATCGTGTAGAATAGTTTTGCTTTTTCGATGTAATCTAAAATTCGATGAAATGAAAATCTTCCGTCGCGCTTGATTTATGCTCAGAATGCGCGACCTCGGGTTTGGTTGTTCCTTTCTTTTGTTTTTGATAGGTTGAATTTTCTTTACATTCTATCTTGATGTGGAAGATTAGAGTTGGAGCGATTTTGATCGTTGACGATTCTCAGTTTAGGATATTTAGTTTAACAAGCATTTTGCTGAAGGAATCCTTCATTATGAAGTAGAATTCAAATTTAGGGATTTCCTGGTTTTAATACGGTTTACTCAGTTTCCTTTATGATTTTGACAAAATACCGATTCTAGATATCAGGTTTGTGCTCTAACGTTTATGCACTTCTTGGAATTTAATTTGAGAAACAGTCTAAGAAAAGAGGCCTTTCTCTGGAAGAGAAGCGCGAGAAGATGCTTCAGATCTTTTACGATTCTCAAGACTTTTTCCTTGTGAGCAAACTTGCACTTCTATTCTTCAATTTTGGAAGTCCTGCAGTTTTATTTCCTATTCCTTTTACTTCATTATTTACAATAAGAAGCTTCCTTCCTTTTTCTCGTTTCAGCTTAAGGAGCTTGAAAAATTGGGTCCCAGGAAAGGTGTGATTTCTCAGTCAGTGAAAGACGTTGTGCAAAGTTTAGTGGACGATGACCTGGTTTCAAAAGAGAAGATTGGAACTTCAGTGAGTAGAATTTTTGAGATGAAACTTCCAGTCATCCGTTATTGTGTTTATACTATTTGCACCATGACTTATTCTTTGCGTATGGGTCATAGCCTTCGGACATGATTGTCTCTCATGCATTATGAATCTGTTTTTTCAATTTGCTATGTATTTATGTATGGTTGTAAATTTCAGGTCTATTTTTGGAGTTTACCAAGCTGTGCTGGTAATCAGGTGAAGTCTATATCATTTGTATCATGATTTGTCTAACTCACTTCAAAGGCTTTATATTTATGATGTGTCCAAGCTCGCTCTAAATATTAAATCATCTGAATATTTGATTGAATTTCTACCTCCAAAATATCTCATGTCCCTCTTCGTACCAGCTGCGGAATGTGTATCGTAAACTTGAATCTGATCTCCAAACCAGTAAGAATAGACTGGAAGAACTTACTGAGCAGAGTAATGCATTAAAGAAGGGAAGAGAGGAATCTGTGAGTGATTATATTTTAAGCAAAAGGTAATTGATGAAAAATATTTGCCCTTCTATCATGAATGCTTTCTTCATGCCAGGAAGAACGAGAGGAAGCCCTAGCTCAATTAAAAGCCATTGAACTGAAGCATAAAGAGCTAAAGGTTTTGCTTGTATTCTGGATTTCTTTCTCTTTTTTATTGGAATAGAAAAATCGATCACGATGATCTTTTAGTTTTCACGCTTCTTTGACAATCTAGTCATTCCCAGGATGAGATGGTACAATATGCAGATAATGATCCAGCAGCCTTTGAAGCAATGAGTTGAGTTTCTTTTACCATTTTTTAGATTTTTACTATAGAAAATGGGTTTCAGCTGTTTAATTCTTTCTTGATATCGCTGTGTGCTAAACATGAACATCTTATGGGACAGAAAATGCAATTGAAGATGCTCATGCTGCAGCCAACCGATGGACAGGTATGCATTCTGACCATAAGCTGCCAACAAGTTTTCTCTGTCTTTCTTCTCTCGTGCCCATTTGAAATTTCTTTCAAAACTCTGTTTATTAACACGCAGACAACATTTTCACTTTGCGACAATGGTGTTCAAACAACTTTCCACAGGCGAAAGAACAACTAGAGAACCTGTATAAAGAGGTAAACCGCACTTCTTTGGTAAAATTGCCCTTCTGCAAGAACTAAAGATATGCTCAAATATAGCACGCACGTCAAATTCCTTATCTTCAACTTTTCATAACGTTGCTTTTCACAGTTTTGGAAAGATAAGAAACAAACCTATACGTCCCAAGAAAATGGGTCTCAATATCTCTAGTTAAAAATTCTCGAGTTATTGGCTGTGTGTGTAAACGCAGGTTGGCATCACGGATGATTTTGATTATTTGGAGTTGTCACCAGCTCCTCTGAGCTCAGTTGTCGATTAAAGTGGGCAGAAGCTTCAAGCTGATTTAACCGCATGTTTTATGTCTCAATGATTCCGAGGCAACAGTATCATAGATCATGGGCTACAGTTTGACTGAAATTCACCCCATATATATATAGAGCACTGTTCGTTAGTTATACGTGGTAAATAAGAAACATGTCAATTCTTAGATTAAATCTAGGTCCGTTTCCAGAACACTGAGACGTTTGCGATGTTATGTTGCGTTCATGGCTCATGAATCTGTAATGTCTTCTTAGGCGCTATAAGCATGTGATCAATAAACATTTTTAGGCATTGGAATGTGTTCTTATGCAGCAGCAGAGTTTATAGAATTCCTGTGAAATTCGTAGGAAAAAACTGATTTAATTATAGGTTTAGTTTAGTTCATAAGATTT

mRNA sequence

AAGTTCATTTGTTACAATCGTAGCCATACTTATTTCATCATCCGATCGTGTAGAATAGTTTTGCTTTTTCGATGTAATCTAAAATTCGATGAAATGAAAATCTTCCGTCGCGCTTGATTTATGCTCAGAATGCGCGACCTCGGGTTTGGTTGTTCCTTTCTTTTGTTTTTGATAGGTTGAATTTTCTTTACATTCTATCTTGATGTGGAAGATTAGAGTTGGAGCGATTTTGATCGTTGACGATTCTCAGTTTAGGATATTTAGTTTAACAAGCATTTTGCTGAAGGAATCCTTCATTATGAAGTAGAATTCAAATTTAGGGATTTCCTGGTTTTAATACGGTTTACTCAGTTTCCTTTATGATTTTGACAAAATACCGATTCTAGATATCAGGTTTGTGCTCTAACGTTTATGCACTTCTTGGAATTTAATTTGAGAAACAGTCTAAGAAAAGAGGCCTTTCTCTGGAAGAGAAGCGCGAGAAGATGCTTCAGATCTTTTACGATTCTCAAGACTTTTTCCTTCTTAAGGAGCTTGAAAAATTGGGTCCCAGGAAAGGTGTGATTTCTCAGTCAGTGAAAGACGTTGTGCAAAGTTTAGTGGACGATGACCTGGTTTCAAAAGAGAAGATTGGAACTTCAGTCTATTTTTGGAGTTTACCAAGCTGTGCTGGTAATCAGCTGCGGAATGTGTATCGTAAACTTGAATCTGATCTCCAAACCAGTAAGAATAGACTGGAAGAACTTACTGAGCAGAGTAATGCATTAAAGAAGGGAAGAGAGGAATCTGAAGAACGAGAGGAAGCCCTAGCTCAATTAAAAGCCATTGAACTGAAGCATAAAGAGCTAAAGGATGAGATGGTACAATATGCAGATAATGATCCAGCAGCCTTTGAAGCAATGAGAAAATGCAATTGAAGATGCTCATGCTGCAGCCAACCGATGGACAGACAACATTTTCACTTTGCGACAATGGTGTTCAAACAACTTTCCACAGGCGAAAGAACAACTAGAGAACCTGTATAAAGAGGTTGGCATCACGGATGATTTTGATTATTTGGAGTTGTCACCAGCTCCTCTGAGCTCAGTTGTCGATTAAAGTGGGCAGAAGCTTCAAGCTGATTTAACCGCATGTTTTATGTCTCAATGATTCCGAGGCAACAGTATCATAGATCATGGGCTACAGTTTGACTGAAATTCACCCCATATATATATAGAGCACTGTTCGTTAGTTATACGTGGTAAATAAGAAACATGTCAATTCTTAGATTAAATCTAGGTCCGTTTCCAGAACACTGAGACGTTTGCGATGTTATGTTGCGTTCATGGCTCATGAATCTGTAATGTCTTCTTAGGCGCTATAAGCATGTGATCAATAAACATTTTTAGGCATTGGAATGTGTTCTTATGCAGCAGCAGAGTTTATAGAATTCCTGTGAAATTCGTAGGAAAAAACTGATTTAATTATAGGTTTAGTTTAGTTCATAAGATTT

Coding sequence (CDS)

ATGCTTCAGATCTTTTACGATTCTCAAGACTTTTTCCTTCTTAAGGAGCTTGAAAAATTGGGTCCCAGGAAAGGTGTGATTTCTCAGTCAGTGAAAGACGTTGTGCAAAGTTTAGTGGACGATGACCTGGTTTCAAAAGAGAAGATTGGAACTTCAGTCTATTTTTGGAGTTTACCAAGCTGTGCTGGTAATCAGCTGCGGAATGTGTATCGTAAACTTGAATCTGATCTCCAAACCAGTAAGAATAGACTGGAAGAACTTACTGAGCAGAGTAATGCATTAAAGAAGGGAAGAGAGGAATCTGAAGAACGAGAGGAAGCCCTAGCTCAATTAAAAGCCATTGAACTGAAGCATAAAGAGCTAAAGGATGAGATGGTACAATATGCAGATAATGATCCAGCAGCCTTTGAAGCAATGAGAAAATGCAATTGA

Protein sequence

MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMRKCN
Homology
[Close]
BLAST of Carg13024 vs. NCBI nr
Match: XP_022961005.1 (meiotic nuclear division protein 1 homolog isoform X1 [Cucurbita moschata] >XP_023516621.1 meiotic nuclear division protein 1 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.6 bits (675), Expect = 1.9e-67
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS
Sbjct: 16  MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 75

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE
Sbjct: 76  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 135

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LKDEMVQYADNDPAAFEAM+
Sbjct: 136 LKDEMVQYADNDPAAFEAMK 155

[Close]
BLAST of Carg13024 vs. NCBI nr
Match: XP_022987867.1 (meiotic nuclear division protein 1 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 262.7 bits (670), Expect = 7.3e-67
Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS
Sbjct: 16  MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 75

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNV+RKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE
Sbjct: 76  CAGNQLRNVHRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 135

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LKDEMVQYADNDPAAFEAM+
Sbjct: 136 LKDEMVQYADNDPAAFEAMK 155

[Close]
BLAST of Carg13024 vs. NCBI nr
Match: XP_022987869.1 (meiotic nuclear division protein 1 homolog isoform X3 [Cucurbita maxima])

HSP 1 Score: 262.7 bits (670), Expect = 7.3e-67
Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS
Sbjct: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNV+RKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE
Sbjct: 61  CAGNQLRNVHRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LKDEMVQYADNDPAAFEAM+
Sbjct: 121 LKDEMVQYADNDPAAFEAMK 140

[Close]
BLAST of Carg13024 vs. NCBI nr
Match: XP_022144945.1 (meiotic nuclear division protein 1 homolog isoform X2 [Momordica charantia])

HSP 1 Score: 246.5 bits (628), Expect = 5.4e-62
Identity = 130/140 (92.86%), Postives = 135/140 (96.43%), Query Frame = 0 

Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLV KEKIGTSVYFWSLPS
Sbjct: 16  MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVFKEKIGTSVYFWSLPS 75

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNVYRKLESDLQT KNRLEELTEQ +ALKKGREESEER+EALA+LKAIELK+ E
Sbjct: 76  CAGNQLRNVYRKLESDLQTGKNRLEELTEQCDALKKGREESEERKEALAELKAIELKYNE 135

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LK EMVQYADNDPAAFEAM+
Sbjct: 136 LKVEMVQYADNDPAAFEAMK 155

[Close]
BLAST of Carg13024 vs. NCBI nr
Match: XP_023530630.1 (meiotic nuclear division protein 1 homolog isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.7 bits (626), Expect = 9.3e-62
Identity = 128/140 (91.43%), Postives = 135/140 (96.43%), Query Frame = 0 

Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQ+FY+SQDFFLLKELEKL PRKGVISQSVKDVVQSLVDDDL SKEKIGTSVYFWSLPS
Sbjct: 1   MLQMFYESQDFFLLKELEKLDPRKGVISQSVKDVVQSLVDDDLGSKEKIGTSVYFWSLPS 60

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNVY KLESDLQTS NRLEELT+QSNALKKGREES+EREEALA+LKAIELKHKE
Sbjct: 61  CAGNQLRNVYLKLESDLQTSNNRLEELTQQSNALKKGREESDEREEALAELKAIELKHKE 120

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LKDEM+QYADNDPAAFEA +
Sbjct: 121 LKDEMIQYADNDPAAFEATK 140

[Close]
BLAST of Carg13024 vs. TAIR10
Match: AT4G29170.1 (Mnd1 family protein)

HSP 1 Score: 214.2 bits (544), Expect = 5.4e-56
Identity = 111/140 (79.29%), Postives = 124/140 (88.57%), Query Frame = 0 

Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFY+SQDFFLLKELEK+GP+KGVISQSVKDV+QSLVDDDLV+K+KIG S+YFWSLPS
Sbjct: 16  MLQIFYESQDFFLLKELEKMGPKKGVISQSVKDVIQSLVDDDLVAKDKIGISIYFWSLPS 75

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLR+V +KLESDLQ S  RL EL +Q  ALKKGREESEER EAL QLK IE KHK+
Sbjct: 76  CAGNQLRSVRQKLESDLQGSNKRLAELVDQCEALKKGREESEERTEALTQLKDIEKKHKD 135

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LK+EMVQ+ADNDPA  EA R
Sbjct: 136 LKNEMVQFADNDPATLEAKR 155

[Close]
BLAST of Carg13024 vs. Swiss-Prot
Match: sp|Q8GYD2|MND1_ARATH (Meiotic nuclear division protein 1 homolog OS=Arabidopsis thaliana OX=3702 GN=MND1 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 9.8e-55
Identity = 111/140 (79.29%), Postives = 124/140 (88.57%), Query Frame = 0 

Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFY+SQDFFLLKELEK+GP+KGVISQSVKDV+QSLVDDDLV+K+KIG S+YFWSLPS
Sbjct: 16  MLQIFYESQDFFLLKELEKMGPKKGVISQSVKDVIQSLVDDDLVAKDKIGISIYFWSLPS 75

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLR+V +KLESDLQ S  RL EL +Q  ALKKGREESEER EAL QLK IE KHK+
Sbjct: 76  CAGNQLRSVRQKLESDLQGSNKRLAELVDQCEALKKGREESEERTEALTQLKDIEKKHKD 135

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LK+EMVQ+ADNDPA  EA R
Sbjct: 136 LKNEMVQFADNDPATLEAKR 155

[Close]
BLAST of Carg13024 vs. Swiss-Prot
Match: sp|Q6DC61|MND1_DANRE (Meiotic nuclear division protein 1 homolog OS=Danio rerio OX=7955 GN=mnd1 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-22
Identity = 57/144 (39.58%), Postives = 95/144 (65.97%), Query Frame = 0 

Query: 1   MLQIFYDSQDFFLLKELEKLGPR-KGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLP 60
           M++IF++++D F LK++EK+ P+ KG+   SVK+V+QSLVDD++V  E++GTS Y+W+ P
Sbjct: 16  MMEIFFETKDVFQLKDIEKIAPKSKGITPMSVKEVLQSLVDDNMVDTERVGTSNYYWAFP 75

Query: 61  SCAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHK 120
           S A +  +    +LE  L+    R + L +  +  K GRE +EERE+ L +L A++ +  
Sbjct: 76  SKALHARKRRLEELEKQLEDGSQRKKALQQAVDKAKVGREVNEEREDLLKELTALKGQRD 135

Query: 121 ELKDEMVQYADNDPAAFEAMRKCN 144
           ++K E+ +Y + DPA  E +R  N
Sbjct: 136 QMKVEIEKYQECDPAVVEEIRNAN 159

[Close]
BLAST of Carg13024 vs. Swiss-Prot
Match: sp|Q5XGY9|MND1_XENLA (Meiotic nuclear division protein 1 homolog OS=Xenopus laevis OX=8355 GN=mnd1 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.4e-21
Identity = 55/144 (38.19%), Postives = 93/144 (64.58%), Query Frame = 0 

Query: 1   MLQIFYDSQDFFLLKELEKLGPR-KGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLP 60
           M++IF++++D F LK+LEK+ P+ KG+ S SVK+++QSLVDD +V  E+IGTS YFW+ P
Sbjct: 16  MMEIFFETKDVFQLKDLEKIAPKEKGITSMSVKEILQSLVDDGMVDSERIGTSNYFWAFP 75

Query: 61  SCAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHK 120
           S A +  +     LE+     K + E L +  +  K GR+++EER + + +L ++  + +
Sbjct: 76  SKALHARKRKLETLEAQFTEVKQKKESLQQCVDKAKVGRQDTEERSKLVEELASLRHRKE 135

Query: 121 ELKDEMVQYADNDPAAFEAMRKCN 144
           EL  ++ +Y + DP   E +R+ N
Sbjct: 136 ELCADLEKYKECDPDVVEEIRQSN 159

[Close]
BLAST of Carg13024 vs. Swiss-Prot
Match: sp|Q32L19|MND1_BOVIN (Meiotic nuclear division protein 1 homolog OS=Bos taurus OX=9913 GN=MND1 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.1e-20
Identity = 55/144 (38.19%), Postives = 89/144 (61.81%), Query Frame = 0 

Query: 1   MLQIFYDSQDFFLLKELEKLGPR-KGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLP 60
           M++IFY+++D F LK++EK+ P+ KG+ + SVK+V+QSLVDD +V  E+IGTS Y+W+ P
Sbjct: 16  MMEIFYETKDVFQLKDMEKIAPKEKGITTMSVKEVLQSLVDDGMVDCERIGTSNYYWAFP 75

Query: 61  SCAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHK 120
           S A +  +     L+S L     +   L +     K GR E+EER     +L ++  + +
Sbjct: 76  SKALHARKRKLEVLDSQLSEGNQKYANLQKSIEKAKVGRHETEERTMLAKELSSLRDQRE 135

Query: 121 ELKDEMVQYADNDPAAFEAMRKCN 144
           +LK E+ +Y + DP   E +R+ N
Sbjct: 136 QLKAEVEKYRECDPQVVEEIRQAN 159

[Close]
BLAST of Carg13024 vs. Swiss-Prot
Match: sp|Q9BWT6|MND1_HUMAN (Meiotic nuclear division protein 1 homolog OS=Homo sapiens OX=9606 GN=MND1 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 6.0e-20
Identity = 57/144 (39.58%), Postives = 89/144 (61.81%), Query Frame = 0 

Query: 1   MLQIFYDSQDFFLLKELEKLGPR-KGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLP 60
           M++IF +++D F LK+LEK+ P+ KG+ + SVK+V+QSLVDD +V  E+IGTS Y+W+ P
Sbjct: 16  MMEIFSETKDVFQLKDLEKIAPKEKGITAMSVKEVLQSLVDDGMVDCERIGTSNYYWAFP 75

Query: 61  SCAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHK 120
           S A +  ++    LES L     +   L +     K GR E+EER     +L ++  + +
Sbjct: 76  SKALHARKHKLEVLESQLSEGSQKHASLQKSIEKAKIGRCETEERTRLAKELSSLRDQRE 135

Query: 121 ELKDEMVQYADNDPAAFEAMRKCN 144
           +LK E+ +Y D DP   E +R+ N
Sbjct: 136 QLKAEVEKYKDCDPQVVEEIRQAN 159

[Close]
BLAST of Carg13024 vs. TrEMBL
Match: tr|A0A2I4GJA9|A0A2I4GJA9_9ROSI (Meiotic nuclear division protein 1 homolog OS=Juglans regia OX=51240 GN=LOC109008376 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.4e-58
Identity = 122/140 (87.14%), Postives = 131/140 (93.57%), Query Frame = 0 

Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFY+SQDFFLLKELEKLGPRKGVI+QSVKDVVQSLVDDDLVSK+KIGTSVYFWSLPS
Sbjct: 16  MLQIFYESQDFFLLKELEKLGPRKGVITQSVKDVVQSLVDDDLVSKDKIGTSVYFWSLPS 75

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNVYRKLESDLQ+SK RL EL +Q  ALKKGREES+ERE+ALA+LKAIE KH  
Sbjct: 76  CAGNQLRNVYRKLESDLQSSKKRLAELVDQCEALKKGREESDEREKALAELKAIEKKHNM 135

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LKDEM QYADNDPAAFEAM+
Sbjct: 136 LKDEMCQYADNDPAAFEAMK 155

[Close]
BLAST of Carg13024 vs. TrEMBL
Match: tr|A0A067KCC1|A0A067KCC1_JATCU (Meiotic nuclear division protein 1 homolog OS=Jatropha curcas OX=180498 GN=JCGZ_07333 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 3.1e-58
Identity = 120/141 (85.11%), Postives = 132/141 (93.62%), Query Frame = 0 

Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           +LQIFY+SQDFFLLKELEKLGP+KGVISQSVKDVVQSLVDDDLVSK+KIGTSVYFWSLPS
Sbjct: 16  ILQIFYESQDFFLLKELEKLGPKKGVISQSVKDVVQSLVDDDLVSKDKIGTSVYFWSLPS 75

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNVYR+LESD+Q+SK R  EL +Q   LKKGREES+EREEALA+LKAIELKH E
Sbjct: 76  CAGNQLRNVYRRLESDVQSSKKRYAELVDQCGGLKKGREESDEREEALAELKAIELKHNE 135

Query: 121 LKDEMVQYADNDPAAFEAMRK 142
           LK+EM QYADNDPAAFEAM+K
Sbjct: 136 LKEEMGQYADNDPAAFEAMKK 156

[Close]
BLAST of Carg13024 vs. TrEMBL
Match: tr|A0A2C9W5I7|A0A2C9W5I7_MANES (Meiotic nuclear division protein 1 homolog OS=Manihot esculenta OX=3983 GN=MANES_03G029700 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 4.1e-58
Identity = 122/141 (86.52%), Postives = 132/141 (93.62%), Query Frame = 0 

Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           +LQIFYDSQDFFLLKELEKLGP+KGVISQSVKDVVQSLVDDDLVSK+KIGTSVYFWSLPS
Sbjct: 16  ILQIFYDSQDFFLLKELEKLGPKKGVISQSVKDVVQSLVDDDLVSKDKIGTSVYFWSLPS 75

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNV+RKLESDLQ+ K R  EL +Q +ALKKGREESEERE+ALA LKAIELKH E
Sbjct: 76  CAGNQLRNVHRKLESDLQSRKKRHAELVDQCDALKKGREESEEREDALAVLKAIELKHNE 135

Query: 121 LKDEMVQYADNDPAAFEAMRK 142
           LK+EM QYADNDPAAFEAM+K
Sbjct: 136 LKEEMDQYADNDPAAFEAMKK 156

[Close]
BLAST of Carg13024 vs. TrEMBL
Match: tr|A0A059CMW4|A0A059CMW4_EUCGR (Meiotic nuclear division protein 1 homolog OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_C00935 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.2e-57
Identity = 119/140 (85.00%), Postives = 131/140 (93.57%), Query Frame = 0 

Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFY+SQDFFLLKELEKLGPRKGVI+QSVKDVVQSLVDDDLVSK+KIGTSVYFWSLPS
Sbjct: 16  MLQIFYESQDFFLLKELEKLGPRKGVITQSVKDVVQSLVDDDLVSKDKIGTSVYFWSLPS 75

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNVYRKLESD+Q+S+ RL EL +Q NALKKGREES+EREEAL+ LK +E K+ E
Sbjct: 76  CAGNQLRNVYRKLESDVQSSERRLVELADQCNALKKGREESDEREEALSNLKKVEEKYNE 135

Query: 121 LKDEMVQYADNDPAAFEAMR 141
           LKDEM +YADNDPAAFEAMR
Sbjct: 136 LKDEMAEYADNDPAAFEAMR 155

[Close]
BLAST of Carg13024 vs. TrEMBL
Match: tr|A0A061GN33|A0A061GN33_THECC (Meiotic nuclear division protein 1 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_037726 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.2e-57
Identity = 121/141 (85.82%), Postives = 131/141 (92.91%), Query Frame = 0 

Query: 1   MLQIFYDSQDFFLLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPS 60
           MLQIFY+SQDFFLLKELEKLGP+KGVI+QSVKDVVQSLVDDDLVSK+KIGTSVYFWSLPS
Sbjct: 69  MLQIFYESQDFFLLKELEKLGPKKGVITQSVKDVVQSLVDDDLVSKDKIGTSVYFWSLPS 128

Query: 61  CAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKE 120
           CAGNQLRNV RKLESD Q+SK R  EL +Q N LKKGREESEEREEALA+LKAIELK+ E
Sbjct: 129 CAGNQLRNVRRKLESDRQSSKKRFTELVDQCNELKKGREESEEREEALAELKAIELKYNE 188

Query: 121 LKDEMVQYADNDPAAFEAMRK 142
           LK+EM QYADNDPAAFEAM+K
Sbjct: 189 LKEEMGQYADNDPAAFEAMKK 209

The following BLAST results are available for this feature:
BLAST of Carg13024 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022961005.11.9e-6799.29meiotic nuclear division protein 1 homolog isoform X1 [Cucurbita moschata] >XP_0... [more]
XP_022987867.17.3e-6798.57meiotic nuclear division protein 1 homolog isoform X1 [Cucurbita maxima][more]
XP_022987869.17.3e-6798.57meiotic nuclear division protein 1 homolog isoform X3 [Cucurbita maxima][more]
XP_022144945.15.4e-6292.86meiotic nuclear division protein 1 homolog isoform X2 [Momordica charantia][more]
XP_023530630.19.3e-6291.43meiotic nuclear division protein 1 homolog isoform X3 [Cucurbita pepo subsp. pep... [more]
BLAST of Carg13024 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G29170.15.4e-5679.29Mnd1 family protein[more]
BLAST of Carg13024 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8GYD2|MND1_ARATH9.8e-5579.29Meiotic nuclear division protein 1 homolog OS=Arabidopsis thaliana OX=3702 GN=MN... [more]
sp|Q6DC61|MND1_DANRE1.3e-2239.58Meiotic nuclear division protein 1 homolog OS=Danio rerio OX=7955 GN=mnd1 PE=2 S... [more]
sp|Q5XGY9|MND1_XENLA5.4e-2138.19Meiotic nuclear division protein 1 homolog OS=Xenopus laevis OX=8355 GN=mnd1 PE=... [more]
sp|Q32L19|MND1_BOVIN2.1e-2038.19Meiotic nuclear division protein 1 homolog OS=Bos taurus OX=9913 GN=MND1 PE=2 SV... [more]
sp|Q9BWT6|MND1_HUMAN6.0e-2039.58Meiotic nuclear division protein 1 homolog OS=Homo sapiens OX=9606 GN=MND1 PE=1 ... [more]
BLAST of Carg13024 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2I4GJA9|A0A2I4GJA9_9ROSI1.4e-5887.14Meiotic nuclear division protein 1 homolog OS=Juglans regia OX=51240 GN=LOC10900... [more]
tr|A0A067KCC1|A0A067KCC1_JATCU3.1e-5885.11Meiotic nuclear division protein 1 homolog OS=Jatropha curcas OX=180498 GN=JCGZ_... [more]
tr|A0A2C9W5I7|A0A2C9W5I7_MANES4.1e-5886.52Meiotic nuclear division protein 1 homolog OS=Manihot esculenta OX=3983 GN=MANES... [more]
tr|A0A059CMW4|A0A059CMW4_EUCGR1.2e-5785.00Meiotic nuclear division protein 1 homolog OS=Eucalyptus grandis OX=71139 GN=EUG... [more]
tr|A0A061GN33|A0A061GN33_THECC1.2e-5785.82Meiotic nuclear division protein 1 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_0... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005647Mnd1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg13024-RACarg13024-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 70..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..106
IPR005647Meiotic nuclear division protein 1PFAMPF03962Mnd1coord: 1..141
e-value: 2.0E-43
score: 148.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg13024Cla011240Watermelon (97103) v1carwmB0090
Carg13024Csa1G575170Cucumber (Chinese Long) v2carcuB0101
Carg13024MELO3C015434Melon (DHL92) v3.5.1carmeB0096
Carg13024ClCG03G015910Watermelon (Charleston Gray)carwcgB0094
Carg13024CSPI01G27770Wild cucumber (PI 183967)carcpiB0106
Carg13024Cucsa.288600Cucumber (Gy14) v1carcgyB0114
Carg13024CmaCh10G006890Cucurbita maxima (Rimu)carcmaB0119
Carg13024CmoCh11G006800Cucurbita moschata (Rifu)carcmoB0129
Carg13024Lsi06G002430Bottle gourd (USVL1VR-Ls)carlsiB086
Carg13024Cp4.1LG18g03880Cucurbita pepo (Zucchini)carcpeB0138
Carg13024Cp4.1LG04g10490Cucurbita pepo (Zucchini)carcpeB0141
Carg13024CsGy1G027010Cucumber (Gy14) v2carcgybB0101
Carg13024MELO3C015434.2Melon (DHL92) v3.6.1carmedB0098
Carg13024CsaV3_1G040040Cucumber (Chinese Long) v3carcucB0109
Carg13024Cla97C03G066220Watermelon (97103) v2carwmbB0094
Carg13024Bhi02G001605Wax gourdcarwgoB0110
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg13024Carg12260Silver-seed gourdcarcarB038
The following block(s) are covering this gene:
GeneOrganismBlock
Carg13024Silver-seed gourdcarcarB102
Carg13024Silver-seed gourdcarcarB104
Carg13024Silver-seed gourdcarcarB108
Carg13024Cucumber (Gy14) v2carcgybB0102
Carg13024Cucumber (Gy14) v1carcgyB0111
Carg13024Cucurbita maxima (Rimu)carcmaB0120
Carg13024Cucurbita maxima (Rimu)carcmaB0121
Carg13024Cucurbita maxima (Rimu)carcmaB0124
Carg13024Cucurbita maxima (Rimu)carcmaB0125
Carg13024Cucurbita moschata (Rifu)carcmoB0128
Carg13024Cucurbita moschata (Rifu)carcmoB0130
Carg13024Cucurbita moschata (Rifu)carcmoB0132
Carg13024Cucurbita moschata (Rifu)carcmoB0134
Carg13024Cucurbita pepo (Zucchini)carcpeB0135
Carg13024Cucurbita pepo (Zucchini)carcpeB0140
Carg13024Cucurbita pepo (Zucchini)carcpeB0143
Carg13024Wild cucumber (PI 183967)carcpiB0107
Carg13024Cucumber (Chinese Long) v2carcuB0102
Carg13024Cucumber (Chinese Long) v3carcucB0110
Carg13024Bottle gourd (USVL1VR-Ls)carlsiB083
Carg13024Bottle gourd (USVL1VR-Ls)carlsiB087
Carg13024Melon (DHL92) v3.5.1carmeB0097
Carg13024Melon (DHL92) v3.6.1carmedB0099
Carg13024Watermelon (Charleston Gray)carwcgB0093
Carg13024Watermelon (97103) v1carwmB0091
Carg13024Watermelon (97103) v1carwmB0093
Carg13024Watermelon (97103) v2carwmbB0093
Carg13024Watermelon (97103) v2carwmbB0096
Carg13024Wax gourdcarwgoB0106
Carg13024Wax gourdcarwgoB0107