Carg12963 (gene) Silver-seed gourd

NameCarg12963
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_052 : 329215 .. 330824 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTGTTGTTGTTGCAGGTCTTGTCTCTGACATCTCTACAGAAATCCACAAACTAAAGCAGGAGGGAAATAAATAAGAGTGTAAATACAGATTTAAGAGAATTTATTATAAAATGTGACACAAAAGAGTTGGTGTCAGAAGGCAATGCCTGCGAAGAAGAGAGAAAAAAATAAATATATTGTATGTACGGTATGAGCTTTTACTGTCTGCTTCCATCTCTTCTTTTACTTTTTTGGTCAGGATTTGGCAGACTTCTCCCTCCCAGCAACCCCCACTTACTATTTGACCTTTTTGCTATTTTGGAAATTTATAAAAATGAGTGATTCAGCTGCTCAGGAAGGCTCTTTTAAGTTCTGATAAAAACAGAAACACTCCCTTCTCTTTTTATCCTTTTCCTTCCCAGTTTCAGACTGTTGCTGAAATTTCTTTGTTTTATTTCCCAAGTGCTTGCTTTACTGTTCTGTGCTTCCACTTTACAGTTTACTCTCCTGAACTATCTATTACTTTTGGCTTGCTGCTCTCTGCTCTCTGCTCTCTGCTCTCTTTAATTTTCTATTAGCTCATTAAGGATTCTCTTCCTTATTTTCACACTTTCTCTTACTTTGCCATTCACTTGGAGATGTTTTGTTTACCTTTTTGTGTAGTTTTGGATTGTATGGATGAAGAGTTGAGTATACACACTTGTATGTGTGTTACTTGTGTTCTAGTTTTGTGGGTTTAGACTTGTAAAAGCTAGGTTGAAGACAGACGAGTTTAAAGTCGTCTTGTGTTGTTTGTCAAATAGTCTTCACTTATGATAAAGTAACGCACATATTAAAGATAGGCTTGGCTCGGTTCTACAGATATAGGCTATCAGCCGCACCACTCGGAGTGTGAGCCACTCGAGTAGCAAGCTATAGAGCTAAAGATAGGATTGAAGAAGGGGCTAGGCTCCTGGTGGAGCAGAGGAGACGGTTAGGATAACGCACAAACTCAACTCTTACTTTCTCTCTTGTGGTCTAATATCGTGTTAAATGAATGCAGGTTCCGAAAACGTAGCCTAAGCTCATGGATTAAGGCGAAGGCGACTTGAATGACTTGCTGGTTTTGTATGAAGAAAGTTGGAATGAATTTGGATGCTTGTGTTGCAAGTTTGGGAGTTGTAGAGAGCAGCACAGTGTTGGTATGTGAATCTGAATGGATGGCAGATTGAAGCACATGCATAGGGCTTTTCAGGGTACAAAGAAGGGACCCCTCCCTCCACTCTTCTTCACCCTCTGCTGCCCCTGAGCTTTGCCAGTCTTACTTTTCCTCTTAAAAACAATTCCCCTTTTTCTATTTTATTTCCCTTCCCCTTTCCACCTCACCATCTGATCTTCCTTATTAATTTTTTAAATTACAACTTTAGTTCTTCCTTCTTGGTTTGGTTCGGGCTCCTCTGGATCTTATTCGTATTGAAAGAAATCTACAAAGAAACGATCCAATTCATCAATATGTGAAATCGACTCTCTTGTTGTTTTTTGGGTTTAGTAATTGTTAGATGAAGACTAAATCAGCTCGTATCGACGAATTAAAAGAGATGTCAACCGACACCAGACGATATCGACAAAGTCCAAACATTTGTGGATGA

mRNA sequence

TTTTTGTTGTTGTTGCAGGTCTTGTCTCTGACATCTCTACAGAAATCCACAAACTAAAGCAGGAGGGAAATAAATAAGAGTGTAAATACAGATTTAAGAGAATTTATTATAAAATGTGACACAAAAGAGTTGGTGTCAGAAGGCAATGCCTGCGAAGAAGAGAGAAAAAAATAAATATATTAAAGTTGGAATGAATTTGGATGCTTGTGTTGCAAGTTTGGGAGTTGTAGAGAGCAGCACAGTGTTGTTCTTCCTTCTTGGTTTGGTTCGGGCTCCTCTGGATCTTATTCGTATTGAAAGAAATCTACAAAGAAACGATCCAATTCATCAATATATGAAGACTAAATCAGCTCGTATCGACGAATTAAAAGAGATGTCAACCGACACCAGACGATATCGACAAAGTCCAAACATTTGTGGATGA

Coding sequence (CDS)

ATGCCTGCGAAGAAGAGAGAAAAAAATAAATATATTAAAGTTGGAATGAATTTGGATGCTTGTGTTGCAAGTTTGGGAGTTGTAGAGAGCAGCACAGTGTTGTTCTTCCTTCTTGGTTTGGTTCGGGCTCCTCTGGATCTTATTCGTATTGAAAGAAATCTACAAAGAAACGATCCAATTCATCAATATATGAAGACTAAATCAGCTCGTATCGACGAATTAAAAGAGATGTCAACCGACACCAGACGATATCGACAAAGTCCAAACATTTGTGGATGA

Protein sequence

MPAKKREKNKYIKVGMNLDACVASLGVVESSTVLFFLLGLVRAPLDLIRIERNLQRNDPIHQYMKTKSARIDELKEMSTDTRRYRQSPNICG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12963-RACarg12963-RAmRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg12963CmoCh10G007900Cucurbita moschata (Rifu)carcmoB0128
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg12963Cucurbita moschata (Rifu)carcmoB0135
Carg12963Cucurbita moschata (Rifu)carcmoB0127
Carg12963Cucurbita moschata (Rifu)carcmoB0129
Carg12963Cucurbita moschata (Rifu)carcmoB0130
Carg12963Cucurbita moschata (Rifu)carcmoB0131
Carg12963Cucurbita moschata (Rifu)carcmoB0134
Carg12963Cucurbita pepo (Zucchini)carcpeB0135
Carg12963Cucurbita pepo (Zucchini)carcpeB0136
Carg12963Cucurbita pepo (Zucchini)carcpeB0137
Carg12963Cucurbita pepo (Zucchini)carcpeB0138
Carg12963Cucurbita pepo (Zucchini)carcpeB0139
Carg12963Cucurbita pepo (Zucchini)carcpeB0141
Carg12963Cucurbita pepo (Zucchini)carcpeB0142
Carg12963Cucurbita pepo (Zucchini)carcpeB0143
Carg12963Wild cucumber (PI 183967)carcpiB0106
Carg12963Wild cucumber (PI 183967)carcpiB0107
Carg12963Wild cucumber (PI 183967)carcpiB0108
Carg12963Wild cucumber (PI 183967)carcpiB0109
Carg12963Cucumber (Chinese Long) v2carcuB0101
Carg12963Cucumber (Chinese Long) v2carcuB0102
Carg12963Cucumber (Chinese Long) v2carcuB0103
Carg12963Cucumber (Chinese Long) v2carcuB0104
Carg12963Cucumber (Chinese Long) v3carcucB0109
Carg12963Cucumber (Chinese Long) v3carcucB0110
Carg12963Cucumber (Chinese Long) v3carcucB0111
Carg12963Cucumber (Chinese Long) v3carcucB0113
Carg12963Bottle gourd (USVL1VR-Ls)carlsiB084
Carg12963Bottle gourd (USVL1VR-Ls)carlsiB085
Carg12963Bottle gourd (USVL1VR-Ls)carlsiB083
Carg12963Bottle gourd (USVL1VR-Ls)carlsiB086
Carg12963Melon (DHL92) v3.5.1carmeB0095
Carg12963Melon (DHL92) v3.5.1carmeB0096
Carg12963Melon (DHL92) v3.5.1carmeB0097
Carg12963Melon (DHL92) v3.5.1carmeB0098
Carg12963Melon (DHL92) v3.6.1carmedB0097
Carg12963Melon (DHL92) v3.6.1carmedB0098
Carg12963Melon (DHL92) v3.6.1carmedB0099
Carg12963Melon (DHL92) v3.6.1carmedB0100
Carg12963Watermelon (Charleston Gray)carwcgB0092
Carg12963Watermelon (Charleston Gray)carwcgB0093
Carg12963Watermelon (Charleston Gray)carwcgB0094
Carg12963Watermelon (97103) v1carwmB0089
Carg12963Watermelon (97103) v1carwmB0090
Carg12963Watermelon (97103) v1carwmB0093
Carg12963Watermelon (97103) v2carwmbB0093
Carg12963Watermelon (97103) v2carwmbB0094
Carg12963Watermelon (97103) v2carwmbB0097
Carg12963Wax gourdcarwgoB0109
Carg12963Wax gourdcarwgoB0106
Carg12963Wax gourdcarwgoB0108
Carg12963Wax gourdcarwgoB0110
Carg12963Silver-seed gourdcarcarB102
Carg12963Silver-seed gourdcarcarB104
Carg12963Silver-seed gourdcarcarB105
Carg12963Silver-seed gourdcarcarB106
Carg12963Silver-seed gourdcarcarB107
Carg12963Silver-seed gourdcarcarB108
Carg12963Cucumber (Gy14) v2carcgybB0101
Carg12963Cucumber (Gy14) v2carcgybB0102
Carg12963Cucumber (Gy14) v2carcgybB0103
Carg12963Cucumber (Gy14) v2carcgybB0104
Carg12963Cucumber (Gy14) v1carcgyB0111
Carg12963Cucumber (Gy14) v1carcgyB0112
Carg12963Cucumber (Gy14) v1carcgyB0115
Carg12963Cucurbita maxima (Rimu)carcmaB0119
Carg12963Cucurbita maxima (Rimu)carcmaB0120
Carg12963Cucurbita maxima (Rimu)carcmaB0121
Carg12963Cucurbita maxima (Rimu)carcmaB0122
Carg12963Cucurbita maxima (Rimu)carcmaB0123
Carg12963Cucurbita maxima (Rimu)carcmaB0125
Carg12963Cucurbita maxima (Rimu)carcmaB0126