Carg12942 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12942
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	DUF581 family protein
Location	Cucurbita_argyrosperma_scaffold_052 : 228496 .. 229671 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTCTTCTCTCTCTCTCAATCATGTTGGCCAAAGGGCAACGTCCGATCATCGGAAGGTTATCGGAGCTTCTCGTCTCCCGTTGCCGGCCAGCCTTCCTCGACACCTCGACACCACCACCACCCGCCTCCGCCGCCAGCCCCACTTCCCATTTCGACCTCTCCCCTTCTCCCAGAGGCAATCTAAAAAATTACAACGCCGCCGTCGGACTTGGCATCGTCGCCGCCCTCGATACCTCCACCTCCGCCGTCCGTGGATGTGATATTTTGGTTAAACACGCCGTCTTCAGCCCGAAATTTAACTCCGCTCGCTGTCCTGCTCCGATCCCGATCGCGTTGGCTGGTGGGTCGTTTCCGCCGGAGGAAGACGACGAACTCGACGGCGTGGAAGAGAATTACACTTATGTTACCACGCGTGGACCTCACGAATCTTCCACACGTGTCTATTACGACGGTGGTCTTGTCGCTAGTAGGTGTTGTGAGAAATCGCCTCCGATTATGGCTCCCGCCGATGAAACTCCGCCGCGCCGGACGGCCGATTTCCTCCGATCGTGCCATTTGTGTGGGAAGAATTTAGAGGGGAAAGATATTTACATATACAAGTAAAGAAACAATACCCAAAACTTTATTTGGTTCAGAATTTAATTTATTCCGATCAAAATTTCTGATGGGTTGTGAAAATTTTGCAGAGGGGAATTGGCGTTTTGTAGCCCGGAGTGCCGGTCGAGCCAAATAACGAAGGAGGAGACGAAGGAGCGGTGTCGGTCGGAGACGAGAACGGCGGTGGAGACGGGGTCGAATTCGCCGTATAACAGAGGGATTTTCTCGACTGGGATTCTTGCAATTTAGGTGAAGAATTAGAAGGAGAAAGTATATACAAAATTTAGATACGGCTAATAGTTTGGTTTTTGAGTATTGTATACATGAAGAACAAGTGGAGTGACAATTATTTACCCACTTCTTGTTTTATGAGCAATAAAATAGAGAAAGGCAATTTTTTTATTGGTGAATTTTCAGACAGACTGTTATATGGAATGTTTTTGTTTTTTGTTCCACTCTCCTATCTAACTAATACTAATGTGTGATCTCACAATCTACTATTTTGGCTATGATAGGGGTCGGTGTTCCTTGCTGGCACACCGCTCAGTGTGGGCTCTGATACTATTTGTAACAGC

mRNA sequence

TCTCTCTCTTCTCTCTCTCTCAATCATGTTGGCCAAAGGGCAACGTCCGATCATCGGAAGGTTATCGGAGCTTCTCGTCTCCCGTTGCCGGCCAGCCTTCCTCGACACCTCGACACCACCACCACCCGCCTCCGCCGCCAGCCCCACTTCCCATTTCGACCTCTCCCCTTCTCCCAGAGGCAATCTAAAAAATTACAACGCCGCCGTCGGACTTGGCATCGTCGCCGCCCTCGATACCTCCACCTCCGCCGTCCGTGGATGTGATATTTTGGTTAAACACGCCGTCTTCAGCCCGAAATTTAACTCCGCTCGCTGTCCTGCTCCGATCCCGATCGCGTTGGCTGGTGGGTCGTTTCCGCCGGAGGAAGACGACGAACTCGACGGCGTGGAAGAGAATTACACTTATGTTACCACGCGTGGACCTCACGAATCTTCCACACGTGTCTATTACGACGGTGGTCTTGTCGCTAGTAGGTGTTGTGAGAAATCGCCTCCGATTATGGCTCCCGCCGATGAAACTCCGCCGCGCCGGACGGCCGATTTCCTCCGATCGTGCCATTTGTGTGGGAAGAATTTAGAGGGGAAAGATATTTACATATACAAAGGGGAATTGGCGTTTTGTAGCCCGGAGTGCCGGTCGAGCCAAATAACGAAGGAGGAGACGAAGGAGCGGTGTCGGTCGGAGACGAGAACGGCGGTGGAGACGGGGTCGAATTCGCCGTATAACAGAGGGATTTTCTCGACTGGGATTCTTGCAATTTAGGTGAAGAATTAGAAGGAGAAAGTATATACAAAATTTAGATACGGCTAATAGTTTGGTTTTTGAGTATTGTATACATGAAGAACAAGTGGAGTGACAATTATTTACCCACTTCTTGTTTTATGAGCAATAAAATAGAGAAAGGCAATTTTTTTATTGGTGAATTTTCAGACAGACTGTTATATGGAATGTTTTTGTTTTTTGTTCCACTCTCCTATCTAACTAATACTAATGTGTGATCTCACAATCTACTATTTTGGCTATGATAGGGGTCGGTGTTCCTTGCTGGCACACCGCTCAGTGTGGGCTCTGATACTATTTGTAACAGC

Coding sequence (CDS)

ATGTTGGCCAAAGGGCAACGTCCGATCATCGGAAGGTTATCGGAGCTTCTCGTCTCCCGTTGCCGGCCAGCCTTCCTCGACACCTCGACACCACCACCACCCGCCTCCGCCGCCAGCCCCACTTCCCATTTCGACCTCTCCCCTTCTCCCAGAGGCAATCTAAAAAATTACAACGCCGCCGTCGGACTTGGCATCGTCGCCGCCCTCGATACCTCCACCTCCGCCGTCCGTGGATGTGATATTTTGGTTAAACACGCCGTCTTCAGCCCGAAATTTAACTCCGCTCGCTGTCCTGCTCCGATCCCGATCGCGTTGGCTGGTGGGTCGTTTCCGCCGGAGGAAGACGACGAACTCGACGGCGTGGAAGAGAATTACACTTATGTTACCACGCGTGGACCTCACGAATCTTCCACACGTGTCTATTACGACGGTGGTCTTGTCGCTAGTAGGTGTTGTGAGAAATCGCCTCCGATTATGGCTCCCGCCGATGAAACTCCGCCGCGCCGGACGGCCGATTTCCTCCGATCGTGCCATTTGTGTGGGAAGAATTTAGAGGGGAAAGATATTTACATATACAAAGGGGAATTGGCGTTTTGTAGCCCGGAGTGCCGGTCGAGCCAAATAACGAAGGAGGAGACGAAGGAGCGGTGTCGGTCGGAGACGAGAACGGCGGTGGAGACGGGGTCGAATTCGCCGTATAACAGAGGGATTTTCTCGACTGGGATTCTTGCAATTTAG

Protein sequence

MLAKGQRPIIGRLSELLVSRCRPAFLDTSTPPPPASAASPTSHFDLSPSPRGNLKNYNAAVGLGIVAALDTSTSAVRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSFPPEEDDELDGVEENYTYVTTRGPHESSTRVYYDGGLVASRCCEKSPPIMAPADETPPRRTADFLRSCHLCGKNLEGKDIYIYKGELAFCSPECRSSQITKEETKERCRSETRTAVETGSNSPYNRGIFSTGILAI

Homology

[Close]

BLAST of Carg12942 vs. NCBI nr
Match: XP_022960733.1 (uncharacterized protein LOC111461446 [Cucurbita moschata])

HSP 1 Score: 474.2 bits (1219), Expect = 2.7e-130
Identity = 236/245 (96.33%), Postives = 238/245 (97.14%), Query Frame = 0


Query: 1   MLAKGQRPIIGRLSELLVSRCRPAFLDTSTPPXXASAASPTSHFDLSPSPRGNLKNYNAA 60
           MLAKGQRPIIGRLSELLVSRCRPAFLDT+T    AS+ASPTSHFDLSPSPRGNLKNYNAA
Sbjct: 1   MLAKGQRPIIGRLSELLVSRCRPAFLDTTT---TASSASPTSHFDLSPSPRGNLKNYNAA 60

Query: 61  VGLGIVAALDTSTSAVRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSFPPEEDDELDG 120
           VGLGIVAALDTSTSAVRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSF PEEDDELDG
Sbjct: 61  VGLGIVAALDTSTSAVRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSFQPEEDDELDG 120

Query: 121 VEENYTYVTTRGPHESSTRVYYDGGLVASRCCEKSPPIMAPADETPPRRTADFLRSCHLC 180
           VEENYTYVTTRGPHESSTRVYYDGGLVASRCCEKSPPIMAPADETPPRRTADFLRSCHLC
Sbjct: 121 VEENYTYVTTRGPHESSTRVYYDGGLVASRCCEKSPPIMAPADETPPRRTADFLRSCHLC 180

Query: 181 GKNLEGKDIYIYKGELAFCSPECRSSQITKEETKERCRSETRTAVETGSNSPYNRGIFST 240
           GKNLEGKDIYIYKGELAFCSPECRSSQITKEETKERCRSETRTAVE  SNSPYNRGIFST
Sbjct: 181 GKNLEGKDIYIYKGELAFCSPECRSSQITKEETKERCRSETRTAVEMASNSPYNRGIFST 240

Query: 241 GILAI 246
           GILAI
Sbjct: 241 GILAI 242

[Close]

BLAST of Carg12942 vs. NCBI nr
Match: XP_023516311.1 (uncharacterized protein LOC111780208 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 472.2 bits (1214), Expect = 1.0e-129
Identity = 235/245 (95.92%), Postives = 237/245 (96.73%), Query Frame = 0


Query: 1   MLAKGQRPIIGRLSELLVSRCRPAFLDTSTPPXXASAASPTSHFDLSPSPRGNLKNYNAA 60
           MLAKGQRPIIGRLSELLVSRCRPAFLDT+T  XX      TSHFDLSPSPRGNLKNYNAA
Sbjct: 1   MLAKGQRPIIGRLSELLVSRCRPAFLDTTTXXXXXXXXXXTSHFDLSPSPRGNLKNYNAA 60

Query: 61  VGLGIVAALDTSTSAVRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSFPPEEDDELDG 120
           VGLGIVAALDTSTSAVRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSFPPEEDDELDG
Sbjct: 61  VGLGIVAALDTSTSAVRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSFPPEEDDELDG 120

Query: 121 VEENYTYVTTRGPHESSTRVYYDGGLVASRCCEKSPPIMAPADETPPRRTADFLRSCHLC 180
           VEENYTYVTTRGPHESSTRVYYDGGLVASRCCEKSPPIMAPADETPPRRTADFLRSCHLC
Sbjct: 121 VEENYTYVTTRGPHESSTRVYYDGGLVASRCCEKSPPIMAPADETPPRRTADFLRSCHLC 180

Query: 181 GKNLEGKDIYIYKGELAFCSPECRSSQITKEETKERCRSETRTAVETGSNSPYNRGIFST 240
           GKNLEGKDIYIYKGELAFCSPECRSSQI+KEETKERCRSETRTAVETGSNSPYNRGIFST
Sbjct: 181 GKNLEGKDIYIYKGELAFCSPECRSSQISKEETKERCRSETRTAVETGSNSPYNRGIFST 240

Query: 241 GILAI 246
           GILAI
Sbjct: 241 GILAI 245

[Close]

BLAST of Carg12942 vs. NCBI nr
Match: XP_022988240.1 (uncharacterized protein LOC111485554 [Cucurbita maxima])

HSP 1 Score: 443.0 bits (1138), Expect = 6.8e-121
Identity = 223/245 (91.02%), Postives = 224/245 (91.43%), Query Frame = 0


Query: 1   MLAKGQRPIIGRLSELLVSRCRPAFLDTSTPPXXASAASPTSHFDLSPSPRGNLKNYNAA 60
           MLAKGQRPIIGRLSELLVSRCRPAFLDT+T    ASAASPTSHFDLS SPRGNLKNYNAA
Sbjct: 1   MLAKGQRPIIGRLSELLVSRCRPAFLDTTT-TASASAASPTSHFDLSSSPRGNLKNYNAA 60

Query: 61  VGLGIVAALDTSTSAVRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSFPPEEDDELDG 120
           VGLGIVAALDTSTS VRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSFPPEEDDELDG
Sbjct: 61  VGLGIVAALDTSTSVVRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSFPPEEDDELDG 120

Query: 121 VEENYTYVTTRGPHESSTRVYYDGGLVASRCCEKSPPIMAPADETPPRRTADFLRSCHLC 180
           VEENYTYVT RGPHESSTRVYYDGGLVASRCCEKSPPIMAPADETPPRRTADFLRSCHLC
Sbjct: 121 VEENYTYVTMRGPHESSTRVYYDGGLVASRCCEKSPPIMAPADETPPRRTADFLRSCHLC 180

Query: 181 GKNLEGKDIYIYKGELAFCSPECRSSQITKEETKERCRSETRTAVETGSNSPYNRGIFST 240
           GKNLEGKDIYIYKGELAFCSPECRSSQI KEET            ET SNSPYNRGIFST
Sbjct: 181 GKNLEGKDIYIYKGELAFCSPECRSSQIKKEETXXXXXXXXXXXXETASNSPYNRGIFST 240

Query: 241 GILAI 246
           GILAI
Sbjct: 241 GILAI 244

[Close]

BLAST of Carg12942 vs. NCBI nr
Match: XP_022968133.1 (uncharacterized protein LOC111467458 [Cucurbita maxima])

HSP 1 Score: 367.5 bits (942), Expect = 3.6e-98
Identity = 187/246 (76.02%), Postives = 200/246 (81.30%), Query Frame = 0


Query: 1   MLAKGQRPIIGRLSELLVSRCRPAFLDTSTPPXXASAASPTSHFDLSPSPRGNLKNYNAA 60
           MLAKGQRP+IGRLSELLVSRCRP+FLD   P      +SPTS FDLSPSPR NLKNY A 
Sbjct: 1   MLAKGQRPVIGRLSELLVSRCRPSFLDVGAP------SSPTSPFDLSPSPRPNLKNYTAG 60

Query: 61  VGLGIVAALDTSTSAVRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSFPPEEDDELDG 120
           VGLGIVAALDTSTSAVRG +ILVKHAV SPK  S R P PIPI L GGSF PEEDDELD 
Sbjct: 61  VGLGIVAALDTSTSAVRGSEILVKHAVCSPKLTSPRRPVPIPIGLVGGSFSPEEDDELDN 120

Query: 121 VE-ENYTYVTTRGPHESSTRVYYDGGLVASRCCEKSPPIMAPADETPPRRTADFLRSCHL 180
           VE ENYT+VTTRGP ESSTRVYY+GGLV   CC KSPP + PAD+ P RRT DFLR CH 
Sbjct: 121 VEDENYTFVTTRGPDESSTRVYYNGGLVTGGCCRKSPPSLKPADKPPTRRTPDFLRYCHS 180

Query: 181 CGKNLEGKDIYIYKGELAFCSPECRSSQITKEETKERCRSETRTAVETGSNSPYNRGIFS 240
           CGKNLEGKDIY+Y+GE AFCSPECRSSQI K+E  ERCRSE R+  E+  NSPYNRGIFS
Sbjct: 181 CGKNLEGKDIYMYRGESAFCSPECRSSQIMKDEIMERCRSEARSPAESLPNSPYNRGIFS 240

Query: 241 TGILAI 246
           TGILAI
Sbjct: 241 TGILAI 240

[Close]

BLAST of Carg12942 vs. NCBI nr
Match: XP_008450954.1 (PREDICTED: uncharacterized protein LOC103492390 [Cucumis melo])

HSP 1 Score: 362.5 bits (929), Expect = 1.2e-96
Identity = 190/249 (76.31%), Postives = 205/249 (82.33%), Query Frame = 0


Query: 1   MLAKGQRPIIGRLSELLVSRCRPAFLDTSTPPXXASAASPTSHFDLSPSPR-GNLKNYNA 60
           MLAKGQRP+IGRLSELLVSRCRPAFL+T  P       SPTSHFDLSPSPR  NLKNY+A
Sbjct: 1   MLAKGQRPVIGRLSELLVSRCRPAFLETGAP-------SPTSHFDLSPSPRPTNLKNYSA 60

Query: 61  AVGLGIVAALDTSTSAVRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSFPPEEDD--- 120
           AVGLGIVAALDTSTS VRGC+ILVKHAV SPK NS R PAPIPI     +F PEEDD   
Sbjct: 61  AVGLGIVAALDTSTSGVRGCEILVKHAVCSPKLNSPRRPAPIPI-----TFSPEEDDEGE 120

Query: 121 ELDGVEENYTYVTTRGPHESSTRVYYDGGLVASRCCEKSPPIMAPADETPPRRTADFLRS 180
           ELD +EENYTYVTTRGP+ESSTRVYYDGGLV     +KSPP   P+D+TPPRRT DFLRS
Sbjct: 121 ELDNLEENYTYVTTRGPYESSTRVYYDGGLVVG---QKSPPTPVPSDQTPPRRTPDFLRS 180

Query: 181 CHLCGKNLEGKDIYIYKGELAFCSPECRSSQITKEETKERCRSETRTAVETGSNSPYNRG 240
           CHLC KNLEGKDIY+Y+GE+AFCS ECRSSQI K+E KERCRSE R+  ET S SPYNRG
Sbjct: 181 CHLCDKNLEGKDIYMYRGEMAFCSTECRSSQIMKDEKKERCRSEARSGTETVSESPYNRG 234

Query: 241 IFSTGILAI 246
           IFSTGILAI
Sbjct: 241 IFSTGILAI 234

[Close]

BLAST of Carg12942 vs. TAIR10
Match: AT5G20700.1 (Protein of unknown function (DUF581))

HSP 1 Score: 115.9 bits (289), Expect = 3.4e-26
Identity = 98/264 (37.12%), Postives = 128/264 (48.48%), Query Frame = 0


Query: 1   MLAKGQRPIIGRLSELLVSRCRPAFLDTSTPPXXASAASPTSHFDLSPSP----RGNLK- 60
           ML K   P+IG++SELLV   R     T+ P       SP S  D    P    R + K 
Sbjct: 1   MLTKRTHPMIGKISELLVGVNR----STAAPFFDVLMTSPKSPLDFKILPQISQRNSSKR 60

Query: 61  ----NYNAAVGLGIVAALDTSTSAVRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSFP 120
               N   +VGLGIVAAL+ S +           +V   + N      P+     GGS  
Sbjct: 61  FYDDNLGGSVGLGIVAALENSNTR-------RITSVCRSEPNQPGRSDPVQFMSHGGSTD 120

Query: 121 PEEDDELDGVEENYTYVTT-RGPHES-STRVYYDGGL--VASRCCEKS-------PPIMA 180
            E+++     EE+YT VT   GP  S +TRVY   G    +S+  +           +  
Sbjct: 121 GEDEEMFIMDEEDYTLVTCHHGPSGSCNTRVYDKDGFECFSSKINDDRRERLFVVDVVTE 180

Query: 181 PADETPPRRTADFLRSCHLCGKNLEGKDIYIYKGELAFCSPECRSSQITKEETKERCRSE 240
             + +P  +   FL SC+LC K L G+DI+IY+GE AFCS ECRSS I  +E KERCRS+
Sbjct: 181 SPENSPEFQGLGFLNSCYLCRKKLHGQDIFIYRGEKAFCSTECRSSHIANDERKERCRSK 240

Query: 241 TRTAVETGSNSPYNRG-IFSTGIL 244
                   S SPY  G IFSTG+L
Sbjct: 241 F-------STSPYTAGQIFSTGVL 246

[Close]

BLAST of Carg12942 vs. TAIR10
Match: AT1G74940.1 (Protein of unknown function (DUF581))

HSP 1 Score: 112.8 bits (281), Expect = 2.9e-25
Identity = 90/246 (36.59%), Postives = 125/246 (50.81%), Query Frame = 0


Query: 1   MLAKGQRPIIGRLSELLVSRCRPAFLDTSTPPXXASAASPTSHFDLS-PSPRGNLKNYNA 60
           +L+K    +I +LSE+LV R R A +           ASP S  DL+ PSP  + +  + 
Sbjct: 2   ILSKRPHLMIRKLSEMLVPRSRSAAIKPE-----EYTASPRSPLDLNFPSPVHSKRFGSG 61

Query: 61  AVGLGIVAALDTSTSAVRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSFPPEEDDELD 120
            VGLGIVAAL+ +++ +   D       +S +F   RCP                  E+D
Sbjct: 62  GVGLGIVAALEETSNGINRHD----PVRYSGRF---RCP------------------EID 121

Query: 121 GVEENYTYVTT-RGPHESSTRVYY--DGGLVASRCCEKSPPIMAPADETP------PRRT 180
             +E YTYVT+  GP    T+VYY  DG  ++     +    M   DE P       R  
Sbjct: 122 LSDEEYTYVTSPNGP----TKVYYNDDGFELSENDYRRVHKPMVTVDEPPVIERQSVRGP 181

Query: 181 ADFLRSCHLCGKNLEGKDIYIYKGELAFCSPECRSSQITKEETKERCRSETRTAVETGSN 237
            +FL SC LC K L+GKDIY+YKGE+ FCS ECRS QI  +E +E+C+++     +  S 
Sbjct: 182 TEFLSSCCLCKKKLQGKDIYMYKGEMGFCSAECRSVQIMNDERQEQCKTQVSRNADVLS- 212

[Close]

BLAST of Carg12942 vs. TAIR10
Match: AT1G19200.1 (Protein of unknown function (DUF581))

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-14
Identity = 82/224 (36.61%), Postives = 105/224 (46.88%), Query Frame = 0


Query: 38  ASPTSHFDLS--PSPRGNLKNYN--AAVGLGIVAALDTSTSAVRGCDILVKHAVFSPKFN 97
           AS TS  D+   PSP G+ K Y+    +GLGIVAAL+ S+    G + +      S  F+
Sbjct: 17  ASQTSPLDMMKFPSP-GSSKRYDNGGGIGLGIVAALEKSSI---GINPVCHTGAGSKGFD 76

Query: 98  SARCPAPIPIALAGGSFPPEEDDELDGVEENYTYVTTRGPHESSTRVYYD------GGLV 157
            AR       A AG      E+         YT VTTR   +  T+VYY       G  +
Sbjct: 77  LARYSKRFQFA-AGIDLSDSEE---------YTCVTTR---DGLTKVYYKEEEFEFGHNL 136

Query: 158 ASRCCEKSPPIMAPADETPP------RRTADFLRSCHLCGKNLEGKDIYIYKGELAFCSP 217
            +       PI   A+E+P       R   DFL SC LC K L+GKDIY+YKG+  FCS 
Sbjct: 137 LNGDQRWRKPIEI-AEESPAKERRVLRDCPDFLTSCCLCKKKLQGKDIYMYKGDEGFCSK 196

Query: 218 ECRSSQITKEETKERCRSETRTAVETGSNSPYNRGIFSTGILAI 246
           ECRS +I ++  KE+    T   V TG        I S GI  I
Sbjct: 197 ECRSLKIMEDSLKEQ-HKLTSVEVLTGEE------IASPGIFLI 215

[Close]

BLAST of Carg12942 vs. TAIR10
Match: AT5G11460.1 (Protein of unknown function (DUF581))

HSP 1 Score: 70.1 bits (170), Expect = 2.2e-12
Identity = 55/172 (31.98%), Postives = 81/172 (47.09%), Query Frame = 0


Query: 88  FSPKFNSARCPAPIPIALAGGSFPPEEDDELDGVEENYTYVTTRGPHESSTRVYYDGGL- 147
           FS   N+ +     P +L GG+   E D E   + E+YT V + GP+  +T  Y D  + 
Sbjct: 179 FSVNNNACQVTKQDPGSLNGGT---ESDME---ISEDYTCVISHGPNPKTTHFYGDQVME 238

Query: 148 ------VASRCCEKSP---------PIMAPADETPPRRTADFLRSCHLCGKNL-EGKDIY 207
                 + +RCC+             +  P D  PP+   DFL  C+ C K L  G+DIY
Sbjct: 239 SVEREELKNRCCKNEKESIFAVAPLDLTTPVDVLPPK---DFLSFCYGCSKKLGMGEDIY 298

Query: 208 IYKGELAFCSPECRSSQITKEETKERCRSETRTAVETGSNSPYNRGIFSTGI 243
           +Y G  AFCS ECRS +I  +E  E    +   A+++ S+S       S G+
Sbjct: 299 MYSGYKAFCSSECRSKEIDLDEEME--DGDEEEAIKSVSSSDKESKKKSNGV 339

[Close]

BLAST of Carg12942 vs. TAIR10
Match: AT3G63210.1 (Protein of unknown function (DUF581))

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-11
Identity = 37/91 (40.66%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 123 ENYTYVTTRGPHESSTRVYYDGGLVASRCCEKSPPIMAPADETPPRRTADFLRSCHLCGK 182
           E+YT V + GP+ + T ++ +   V +  C  S P+  PA ET  + T  FL  C  C K
Sbjct: 174 EDYTRVISHGPNPTITHIFDNSVFVEATPC--SVPLPQPAMET--KSTESFLSRCFTCKK 233

Query: 183 NLEGK-DIYIYKGELAFCSPECRSSQITKEE 213
           NL+ K DIYIY+GE  FCS ECR  ++  ++
Sbjct: 234 NLDQKQDIYIYRGEKGFCSSECRYQEMLLDQ 260

[Close]

BLAST of Carg12942 vs. Swiss-Prot
Match: sp|Q8LGS1|MARD1_ARATH (Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 1.9e-10
Identity = 37/91 (40.66%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 123 ENYTYVTTRGPHESSTRVYYDGGLVASRCCEKSPPIMAPADETPPRRTADFLRSCHLCGK 182
           E+YT V + GP+ + T ++ +   V +  C  S P+  PA ET  + T  FL  C  C K
Sbjct: 174 EDYTRVISHGPNPTITHIFDNSVFVEATPC--SVPLPQPAMET--KSTESFLSRCFTCKK 233

Query: 183 NLEGK-DIYIYKGELAFCSPECRSSQITKEE 213
           NL+ K DIYIY+GE  FCS ECR  ++  ++
Sbjct: 234 NLDQKQDIYIYRGEKGFCSSECRYQEMLLDQ 260

[Close]

BLAST of Carg12942 vs. TrEMBL
Match: tr|A0A1S3BR52|A0A1S3BR52_CUCME (uncharacterized protein LOC103492390 OS=Cucumis melo OX=3656 GN=LOC103492390 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 7.7e-97
Identity = 190/249 (76.31%), Postives = 205/249 (82.33%), Query Frame = 0


Query: 1   MLAKGQRPIIGRLSELLVSRCRPAFLDTSTPPXXASAASPTSHFDLSPSPR-GNLKNYNA 60
           MLAKGQRP+IGRLSELLVSRCRPAFL+T  P       SPTSHFDLSPSPR  NLKNY+A
Sbjct: 1   MLAKGQRPVIGRLSELLVSRCRPAFLETGAP-------SPTSHFDLSPSPRPTNLKNYSA 60

Query: 61  AVGLGIVAALDTSTSAVRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSFPPEEDD--- 120
           AVGLGIVAALDTSTS VRGC+ILVKHAV SPK NS R PAPIPI     +F PEEDD   
Sbjct: 61  AVGLGIVAALDTSTSGVRGCEILVKHAVCSPKLNSPRRPAPIPI-----TFSPEEDDEGE 120

Query: 121 ELDGVEENYTYVTTRGPHESSTRVYYDGGLVASRCCEKSPPIMAPADETPPRRTADFLRS 180
           ELD +EENYTYVTTRGP+ESSTRVYYDGGLV     +KSPP   P+D+TPPRRT DFLRS
Sbjct: 121 ELDNLEENYTYVTTRGPYESSTRVYYDGGLVVG---QKSPPTPVPSDQTPPRRTPDFLRS 180

Query: 181 CHLCGKNLEGKDIYIYKGELAFCSPECRSSQITKEETKERCRSETRTAVETGSNSPYNRG 240
           CHLC KNLEGKDIY+Y+GE+AFCS ECRSSQI K+E KERCRSE R+  ET S SPYNRG
Sbjct: 181 CHLCDKNLEGKDIYMYRGEMAFCSTECRSSQIMKDEKKERCRSEARSGTETVSESPYNRG 234

Query: 241 IFSTGILAI 246
           IFSTGILAI
Sbjct: 241 IFSTGILAI 234

[Close]

BLAST of Carg12942 vs. TrEMBL
Match: tr|A0A0A0LWR3|A0A0A0LWR3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G597720 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 2.3e-93
Identity = 188/250 (75.20%), Postives = 202/250 (80.80%), Query Frame = 0


Query: 1   MLAKGQRPIIGRLSELLVSRCRPAFLDTSTPPXXASAASPTSHFDLSPSPR-GNLKNYNA 60
           MLAKGQRP+IGRLSELLVSRCRPAFLDT  P       SPTSHFDLSPSP    LKNY+A
Sbjct: 1   MLAKGQRPVIGRLSELLVSRCRPAFLDTGAP-------SPTSHFDLSPSPTPTTLKNYSA 60

Query: 61  AVGLGIVAALDTSTSAVRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSFPPEEDD--- 120
           AVGLGIVAALDTSTSAVRGC+ILVKH V SPK NS R PAPIPI     +F PE+DD   
Sbjct: 61  AVGLGIVAALDTSTSAVRGCEILVKHVVCSPKLNSPRRPAPIPI-----TFSPEQDDEEE 120

Query: 121 ELDGVEENYTYVTTRGPHESSTRVYYDGGLVASRCCEKSPPIMAPADETPPRRTADFLRS 180
           ELD +EENYTYVTTRGP +SSTRVYYDGGLV S   EKSPP   P+D TPPRRT DFLRS
Sbjct: 121 ELDNLEENYTYVTTRGPFQSSTRVYYDGGLVVS---EKSPPTPVPSDITPPRRTPDFLRS 180

Query: 181 CHLCGKNLEGKDIYIYKGELAFCSPECRSSQITKEETKERCRSETRTAVET-GSNSPYNR 240
           CHLC +NLEGKDIY+Y+GE+AFCS ECRSSQI K+E KERCRSE R+  ET  S SPYNR
Sbjct: 181 CHLCDRNLEGKDIYMYRGEMAFCSTECRSSQIMKDEKKERCRSEARSGTETVVSESPYNR 235

Query: 241 GIFSTGILAI 246
           GIFSTGILAI
Sbjct: 241 GIFSTGILAI 235

[Close]

BLAST of Carg12942 vs. TrEMBL
Match: tr|A0A0B2PJW9|A0A0B2PJW9_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_032427 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 8.3e-43
Identity = 125/265 (47.17%), Postives = 151/265 (56.98%), Query Frame = 0


Query: 1   MLAKGQRPIIGRLSELLVSRCRP-AFLDTSTPPXXASAASPTSHFDLS--PSPRGNLKNY 60
           M  K  RP+IG+LSELLVSR R  A LDT+         SP    D+    SPRG LKNY
Sbjct: 1   MSGKRPRPMIGKLSELLVSRGRTVALLDTT--------GSPRGPLDMKMMQSPRG-LKNY 60

Query: 61  N-AAVGLGIVAALDTSTSAVRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSFPPEEDD 120
           +   VGLGIV ALD S + V   ++L KH V +   N +    PIP+         +  D
Sbjct: 61  DLGGVGLGIVVALDKSNNEVAAREVLPKHTVCTSNLNRS---GPIPVHYT------KNPD 120

Query: 121 ELDGVEENYTYVTTRGPHESSTRVYYDGG---------------LVASRCCEKSPPIMAP 180
           E D   E YTYVT R P+++ T+VYYDGG                       +  P++ P
Sbjct: 121 EFD--VEEYTYVTCRVPNKTFTKVYYDGGEXXXXXXXXXXXXXXXXXXXXXXEPQPLIEP 180

Query: 181 ADETPPRRTADFLRSCHLCGKNLEGKDIYIYKGELAFCSPECRSSQITKEETKERCRSET 240
               P   T+ FL SCHLCGK L GKDIY+Y+GE AFCSPECRSSQIT +E KERCRSE 
Sbjct: 181 ESSYP---TSSFLSSCHLCGKKLHGKDIYMYRGEKAFCSPECRSSQITMDERKERCRSEA 240

Query: 241 RTAVETGSNSPYNR-GIFSTGILAI 246
             +VE  S+SPY R  IFSTGILA+
Sbjct: 241 SRSVEM-SSSPYTREQIFSTGILAL 241

[Close]

BLAST of Carg12942 vs. TrEMBL
Match: tr|C6TCK1|C6TCK1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100816402 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.6e-41
Identity = 125/259 (48.26%), Postives = 154/259 (59.46%), Query Frame = 0


Query: 1   MLAKGQRPIIGRLSELLVSRCRP-AFLDTSTPPXXASAASPTSHFDLSPSPRGNLKNYN- 60
           ML K  RP+IG+LSELLVSR R  A+LDT+  P       P     +  SPRG LKNY+ 
Sbjct: 1   MLGKRPRPMIGKLSELLVSRGRTVAYLDTTGSP-----RGPLDMKMMQSSPRG-LKNYDL 60

Query: 61  AAVGLGIVAALDTSTSAVRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSFPPEEDDEL 120
             VGLGIV ALD S + V   ++L KHAV +   N +    PIP+         +  DE 
Sbjct: 61  GGVGLGIVVALDKS-NEVAAREVLPKHAVCTSNLNRS---GPIPVHYT------KNPDEF 120

Query: 121 DGVEENYTYVTTRGPHESSTRVYYDGGLVASRCCEKS-----------PPIMAPADETPP 180
           D   E YTYVT   P+++ T+VYYDGG    R    +            P++  A+   P
Sbjct: 121 D--VEEYTYVTCHVPNKTFTKVYYDGGEGEIRRHYNNSNVGVLRRTAPQPLIVEAESLYP 180

Query: 181 RRTADFLRSCHLCGKNLEGKDIYIYKGELAFCSPECRSSQITKEETKERCRSETRTAVET 240
             T++FL SCHLCGK L GKDIY+Y+GE AFCSPECRSSQI  +E KERCRSE   +VE 
Sbjct: 181 --TSNFLSSCHLCGKKLHGKDIYMYRGEKAFCSPECRSSQIMMDERKERCRSEASRSVEM 238

Query: 241 GSNSPYNR-GIFSTGILAI 246
            S+SPY R  IFSTGILA+
Sbjct: 241 -SSSPYAREQIFSTGILAL 238

[Close]

BLAST of Carg12942 vs. TrEMBL
Match: tr|A0A061GLE8|A0A061GLE8_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_037491 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.7e-41
Identity = 122/260 (46.92%), Postives = 150/260 (57.69%), Query Frame = 0


Query: 1   MLAKGQRPIIGRLSELLVSRCRPAFLDTSTPPXXASAASPTSHFDL-SPSPRGNLKNYN- 60
           ML K  RP+IG+LSELLVS  +P FLD +T        SP    DL SPSPRG LK ++ 
Sbjct: 1   MLGKRPRPMIGKLSELLVSGSKPGFLDLAT--------SPRGPLDLKSPSPRG-LKRFDV 60

Query: 61  AAVGLGIVAALDTSTSAVRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSFPPEEDDEL 120
             VGLGIVAAL+ S+ + R       HA+ S   N ++           G     ED E+
Sbjct: 61  GGVGLGIVAALEKSSDSCR-------HAICSSNLNRSKAIVVSSGRNWDGLRGRCEDLEM 120

Query: 121 DGVEENYTYVTTRGPHESSTRVYYDGGLVASRCC-----------EKSPPI-MAPADETP 180
           + + ENYTYVT+ GP +SST+VYYDGG                  E +P       D  P
Sbjct: 121 ESL-ENYTYVTSHGPGKSSTKVYYDGGERRRSSSGHDRNGFGAVKETTPAARFVEGDVVP 180

Query: 181 PRRTADFLRSCHLCGKNLEGKDIYIYKGELAFCSPECRSSQITKEETKERCRSETRTAVE 240
              T+DFL +CHLC K L GKDIY+Y+GE AFCS ECRS+QI  +E KE+CRSE   + +
Sbjct: 181 TYPTSDFLSTCHLCRKKLHGKDIYMYRGEKAFCSTECRSTQIMMDERKEQCRSEASRSAK 240

Query: 241 TGSNSPYNRG-IFSTGILAI 246
             S SPYN G IFSTGILAI
Sbjct: 241 VPS-SPYNTGQIFSTGILAI 242

The following BLAST results are available for this feature:

BLAST of Carg12942 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960733.1	2.7e-130	96.33	uncharacterized protein LOC111461446 [Cucurbita moschata]	[more]
XP_023516311.1	1.0e-129	95.92	uncharacterized protein LOC111780208 [Cucurbita pepo subsp. pepo]	[more]
XP_022988240.1	6.8e-121	91.02	uncharacterized protein LOC111485554 [Cucurbita maxima]	[more]
XP_022968133.1	3.6e-98	76.02	uncharacterized protein LOC111467458 [Cucurbita maxima]	[more]
XP_008450954.1	1.2e-96	76.31	PREDICTED: uncharacterized protein LOC103492390 [Cucumis melo]	[more]

BLAST of Carg12942 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20700.1	3.4e-26	37.12	Protein of unknown function (DUF581)	[more]
AT1G74940.1	2.9e-25	36.59	Protein of unknown function (DUF581)	[more]
AT1G19200.1	1.8e-14	36.61	Protein of unknown function (DUF581)	[more]
AT5G11460.1	2.2e-12	31.98	Protein of unknown function (DUF581)	[more]
AT3G63210.1	1.1e-11	40.66	Protein of unknown function (DUF581)	[more]

BLAST of Carg12942 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LGS1\|MARD1_ARATH	1.9e-10	40.66	Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2	[more]

BLAST of Carg12942 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BR52\|A0A1S3BR52_CUCME	7.7e-97	76.31	uncharacterized protein LOC103492390 OS=Cucumis melo OX=3656 GN=LOC103492390 PE=...	[more]
tr\|A0A0A0LWR3\|A0A0A0LWR3_CUCSA	2.3e-93	75.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G597720 PE=4 SV=1	[more]
tr\|A0A0B2PJW9\|A0A0B2PJW9_GLYSO	8.3e-43	47.17	Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_032427 PE=4 SV=1	[more]
tr\|C6TCK1\|C6TCK1_SOYBN	1.6e-41	48.26	Uncharacterized protein OS=Glycine max OX=3847 GN=100816402 PE=2 SV=1	[more]
tr\|A0A061GLE8\|A0A061GLE8_THECC	2.7e-41	46.92	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_037491 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007650	Zf-FLZ_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12942-RA	Carg12942-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 245..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..49
None	No IPR available	PANTHER	PTHR33059:SF6	SUBFAMILY NOT NAMED	coord: 1..245
None	No IPR available	PANTHER	PTHR33059	FAMILY NOT NAMED	coord: 1..245
IPR007650	Zf-FLZ domain	PFAM	PF04570	zf-FLZ	coord: 164..213 e-value: 3.4E-20 score: 71.2
IPR007650	Zf-FLZ domain	PROSITE	PS51795	ZF_FLZ	coord: 172..215 score: 20.795

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12942	Cla011140	Watermelon (97103) v1	carwmB0090
Carg12942	Csa1G597720	Cucumber (Chinese Long) v2	carcuB0101
Carg12942	MELO3C015541	Melon (DHL92) v3.5.1	carmeB0096
Carg12942	ClCG03G014840	Watermelon (Charleston Gray)	carwcgB0094
Carg12942	CSPI01G28920	Wild cucumber (PI 183967)	carcpiB0106
Carg12942	Cucsa.141970	Cucumber (Gy14) v1	carcgyB0112
Carg12942	CmaCh11G007530	Cucurbita maxima (Rimu)	carcmaB0120
Carg12942	CmaCh10G007840	Cucurbita maxima (Rimu)	carcmaB0119
Carg12942	CmoCh11G007640	Cucurbita moschata (Rifu)	carcmoB0129
Carg12942	CmoCh10G008110	Cucurbita moschata (Rifu)	carcmoB0128
Carg12942	Lsi06G003570	Bottle gourd (USVL1VR-Ls)	carlsiB086
Carg12942	Cp4.1LG18g02750	Cucurbita pepo (Zucchini)	carcpeB0138
Carg12942	Cp4.1LG04g11150	Cucurbita pepo (Zucchini)	carcpeB0141
Carg12942	CsGy1G028140	Cucumber (Gy14) v2	carcgybB0101
Carg12942	MELO3C015541.2	Melon (DHL92) v3.6.1	carmedB0098
Carg12942	CsaV3_1G041300	Cucumber (Chinese Long) v3	carcucB0109
Carg12942	Cla97C03G065090	Watermelon (97103) v2	carwmbB0094
Carg12942	Bhi02G001489	Wax gourd	carwgoB0110

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12942	Carg25206	Silver-seed gourd	carcarB103

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12942	Silver-seed gourd	carcarB106
Carg12942	Silver-seed gourd	carcarB108
Carg12942	Cucumber (Gy14) v2	carcgybB0103
Carg12942	Cucurbita maxima (Rimu)	carcmaB0121
Carg12942	Cucurbita maxima (Rimu)	carcmaB0123
Carg12942	Cucurbita moschata (Rifu)	carcmoB0127
Carg12942	Cucurbita moschata (Rifu)	carcmoB0130
Carg12942	Cucurbita pepo (Zucchini)	carcpeB0139
Carg12942	Cucurbita pepo (Zucchini)	carcpeB0143
Carg12942	Wild cucumber (PI 183967)	carcpiB0108
Carg12942	Cucumber (Chinese Long) v2	carcuB0103
Carg12942	Cucumber (Chinese Long) v3	carcucB0111
Carg12942	Bottle gourd (USVL1VR-Ls)	carlsiB085
Carg12942	Melon (DHL92) v3.5.1	carmeB0098
Carg12942	Melon (DHL92) v3.6.1	carmedB0100
Carg12942	Wax gourd	carwgoB0108