Carg12939 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12939
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transmembrane protein, putative
Location	Cucurbita_argyrosperma_scaffold_052 : 210398 .. 215976 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATGAAATAATTTATTGGATATAAAATAAAAAATTAATTTTTTTATTGATCCGGAGAAATAAAATCGTACTCCAAATTTTACGGCCATTACTTCTCTGATCGGACTTTCTTTTCCACTGTCCTCTCTGAGTTAGGATCGACGTTCGCCGTTTTCTTCCTCCGACGGCCACATCGAGCCAGCGCCTTCCCTCCCTTTGCTTTCTCTGCTCCCGATTGCCGAACTGTCCAATTTCTCCAACGATTTTTCTCTCGTTTGATCGATTTCCAAGTCGCGGGGCTTTCCAGTTTCCAATTGAAACAGGATTTGCTTATTATTATCGGTAAATTTCATGCGTTTCTATTCGTCTCAATGTCATCTACTGTTCTTCTGTTGGCTCTTTGATTATTTGTTGGTTCTCTTTTCCCTTCCGCTGCCCTCAGACAAGCAATGAGACAACCGCAATTCGAGTGCAATATCGCTCGTCTCATTGCGATCCCGATGAGCTTTCGGCTCAATTTTTTTATTTGTCTTTGATAACTTTATGAATCATTTATGAATTTGGGTTTATTTCTCGCGGAATTATGCTGGGGAACTTGGATTATTGCTGCTTAGTCGGATTAATTTCTGTCATCTAAGGATGTGTAGTCTTTCTTTACATTCAACCAAATTCAGTACGATTACTTTTGTACTTGTGAATCCGGAGCATCCTATCATACAAAATTGTTGAAGCCCCCAAACAATTAAAACTAGATGATTCGAAGTACTTGAATGCGACTCCTCTTAGTAAGAATTTGTATGGTTAATTCGATTTACGGAATTGTATAATTAAATTTGACTTTGTTTTGTGTCAGCTTAGATGGGTTCAGACGTGGAGGCTGTGGAAATTAGTAACTTGGAAAGGGGTCTATTGTCTGAATGCAATTCTGATTTGGAACCTGAAATCGACGATGAGCCCGTGTTGTTTGCAGCTTCCTTCCAAGAGATGGAAGACAGCTTTGTTAAGTATCATACAGCACAATGGGTCCTTTACTCCTTGCTTTTGATTTTAGCGTGGGGGATTGGGTTGTTGATGCTGCTTTATCTACCAATAAGACGATACGTTCTGCGAAAAGATATTCAATCGAAGAAGCTTTATCTTACACCAAATTCTATAATCTACAAGGTAATTTGTGGAGTTCAATCTATTTTAATTTACAGCCTTTGGTGTTTCTGTTTAACTATAGTAAGTTCTCCCACTAACTGAATGCCTAAGGATTATCATGATTAGTAGTTGAATGTTGTTGCACGCTGTCGTATAAGTGGCTCTACAGTGGAACTATATCTTTTTCATTTTAGCCTAAACCAGTAATATGCTTCCATTGTTCACTCTTATCTTTGATCTCTGAAAGACGGTTCTATGAGTATGAATAAAACTATTTGCTCGTGTACCTTAAGGAGTATTGTATTTTCCATCACAGGTTACAAGACCTGTACCTTTTCCATGTTTTGGAGTATTGAAGAAAGAGAAGCATGTTTTGTTGCCTTCAGTGGCAGACATTATAGTTGAACAAGGTTAAGTTGTTGTTGTTCTTGTTGTTCCTTTTTTTAATAATGGTTTACTAAATCTAAGCTTCATACTAACCTTCTATTTCGTAATGCAGCAAAACAATTAGTTGTAATAATTGAGGAGGAGAAGAAAAAGTTTATGCATTTAATTTTCGTAGTTATAAATAAGTTTTCTGGGGATGTTAGCAATTAGCCAACAAGAAAATGGACAGATGGGAGTTTGCAGAAAGAATAAAAAGAAGAGTTAGAACTTTAGCCCATAAAATTTGTTGTGAAGATCCTGGAATCATTGTTTCTTAGATAACTAAATTTATTTTGACAATGAAGCTGCCATCTTTATTGTTCATCATCCAGTTCTATGCGTTTGAACAAAACATGCTGAGGTTGACAAACATTTTATTAAGGGCTATATTGACTTGAATTTCTATATTGCATTAAAATTGTAAATATTGTTAAAAATGCATAGTTTAATAAACATTTCCTTGTCCTATTTGTGTCCTAAATTCATAAAAAATATTATATTACCGCATTTGTGACGTGTTGTATCCATGTCTTGAATTTGTATCCATGCTTCTTAGGAAAATACTCTTACTCTGTATGACTGTTTTTATTGATGTACCTGGTGGCCTCTCTTGCTCTTCATTCTCCTTAAACTCCTAGTGCCTTTTGTCTAATAGAGAGGAGGTTAACGTGGTGAGTCTACTTGATCTTTTTCGCGATTAGTGTGTGACCCTTGCGAGGAGGGATAGTAGAATCTGGACGCATCCTTCTAGGGGCTGCTCGTGCCATTTGTTTTTCATGTATTATCTAATTTTTCTCCTTCGTTTGCTACCTCAGTTTCTTCTGTTTATCCTTGTTCTTGAAAGTTATAGTTTCAAAAAAGGTTAAGGTTTTTGCTTGCCCAGTATTACATGGAGAGTTATTGCCATGGATAGTGTCCAAAAGGCATTCTTCCTATGTGTTGCATTTGCATGGTGCATTCTTTGCAGGAAGTTCGAGGAGAGTCTTGATCATTTTTTGTGGGAATGTCAGTTTGCTTTTCTTTCGGGTCGTTGGAGGAATTTGTTTCAGGTTTGTGGAGCACGCTATTGATGAGGTGCTTCTAAATCCTCCTTTTAGGGAGAAGGCCAAAGTGGTCGTGGCAAGCTAATTTCTTTCTAGTTTGTGGGGGTATTTGGATTGAGTGTAGCAATTGAAACTTTGGAGAGGTTGAGAGATTGAGGAAGACTGGAAGGTAGCTATGTTTAATGTCTCTTTGTTGTTGTTGTTGTAACTTTGGTATTGTTCTTTTGGATTAGAGTTCTGGTAGGGTCGACTCTCTCTGTGAGATCCCATATCGATTGGAGTGTGGAACGAAACACTCCTTGTAAGGGTGAAAATCTCTCTCTATTAAATGTGTTTTAAAATCGTGGGGTTGACGGCGATTGGTAATGGGCCAAAACGGACAATATCTACTAACGGTGGGTTTGTTGGGGTGTTACGAATGGTATCAGAGCTAGACACCGGGTTGTGTGCCAGTGAGGACGCTGGGCCACAAGAGGGGTGGACTGTGAGATCCTGTATGGATTGAAGAGTGGAATGAAACACTCCTTATAAGGGTGTGAAAATCTCTCTCTAGTAGACGCGTTTTAAAACCGTGAGGCTGATGGCGATACGTAATAGGCCAAAGCGGCAATATCTGCTAACAATGGGCATGGGGTGTTATAAATGGTATCAGGGCCAGACATCGGGCGGTGTCCAGCGAGGATGCTAGGCCCCTAAGGGGGGTAGATTGTGAGATCCCACAACAATTGGAGAGTGAAACGAAACGTTCCTTATAAGGGTGTAAAAATCTCTCTCTAGTAGACGCGTTTTAAAATCGTGATACTTACGGCGATACGTAATGGGCTCGGGCTTGGGTGTTACACTCTCTTTTTCTTGTAGAATCTGTTGTGTTTGCCCTTGCTTTCATTCAATTTTCTCACATTCGTACCTAAAAAAAAATATATTTACTACAACATATAACTTTTAAGATCTCGATCCCATGTTTACAGGATATCTACAGTCTCTCTATGGAGTTTACTCTCTTAGGATAGAGAATGCTGGCCTGAGAAGACCACCTGGTGATGACGTTCAAATTCAAGGAGTTACAGACCCAATTGCATTTAAAAAGGTACTTTTTGGTATCAATGGATAGGTTTCCAATGATCTTAGAGGTCACCCTCGTTCTGCATTTCTCAGGCTGTTCTAATGCGTCTCTCTGATATGAGGAATGATGGCAATGAAGAAGTTCCAAATACAAGGGTAGGTCATTGCATAATCCTACCTGTCAAATGATGACATTGACTAAAAATACATATATTTTATCTAAATCATAGGCGGCATCTCCATCGAAATCTCTAAAGTACGACCCGTACTTCTATTCGGGGGAACGAGTACTTCAGAAAGTAGATGAGGTTGGAAGCTCTGTGAAGGTATCAACTAATTATCGCTATCCGTTTTTATATAAACGCCATTGCTTTAACTTCTGTATTACTGATTGGGTTGGTTGTGTCTGCTACAGAGAATTCAAGCTTTGATTGAAGAACAACGGTCTCAAGCATCTAACCCTTTAGGATGAAGTAAGTTGATTATAAACATCTGGGAAACTTTAAACACTGAGCTCAGTTAAGAACTTTATGCTTGGCTTACCCATCTTTTGTGATGAGTGTGAGTTTACTTTGCTCGAGCAAACAAAGCTTTCTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATGAGGGTGCGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTGAGGGGAAGCTGAAAAGGAAAGCTCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGCCGTTACACTTTCACTGGCTTACTAATTTATTTTCGAGGTGGCTTGAACAATATGAGATCCCACGTCGGTTGGAGAGGAGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCTTAGCATACTCGTTTTAAAAACCTTTAGTGGAAGCCCAAAAAGCAAAGTCCAAATAAGACAATATCTGCTAGTGGTGAGCTTGGCTATGATTCTGGGTCTTATACAACACCTCTATTAACATTTGCTATTTGATTAGATCAACCAAAAAGTACTCTAGTGAGTGGATTAGTTCTAACGTCTCCCTGCATATCGTTCTTCCACGTCTAGATGTTTCGTTTAGATGCTGCTATCCGAGCACCGAAACGGTAGAAGACCAGTCCCAGTTTTACGAGGATTGGAGCCGAATAAGCTGAAGAAAATGTACTTCTAATGACTAAGGTTTGTTCTAAACTCTCCTCTATGGCTGATGAGTTGATGAGTATCAATTACCATTAATGAACTGATTGAGGCTGAAGTTTTCTGCAAGAAAGGTTCAAGTTTTTATTCTTGCTTGTATAGATAGATGTATTTTTACCCTTGAAAACCACCCTTAAAAGTATATATGTTATACATATGGTTTTGGTTTTTTATAGCTTAAATTAAACGTTTAGTTCTTAAACTTCAAGATCGTGTTCATCGAGCTTCTAACCTTGAACGAATATCTTATAAGTTCTTGACATTCCAAATATGCTGATAGATCCCATAAACTTTCGATGTTATGCTTAATAGAGTAGATTTTTTTGCTTTTCGTGTTCGTGTTATTGTTACGGTTTCTATTTCGAATAATCAAACAACTTTTTCATTTATTGCATGCCATGTGATTTTACATTATTGGGAGTGGTTGGATATACTCCTAATGACATAGGAGGCATTAAAATGATTATTATAGTTTTTCTTTTAGAACAATCAAACTACTAATGCTTGGTATGGTATGGTATAGCTAATTAATGAACTTTATCGTACTCTTTTGCGTTCGGTTTGAAATTAATAGGCTCGTTCTTAGGGGTGCACATGGGTGGATTGGAATTTTTTTTGGACCAGCCCGAGATTTTGGGTTGGTCAGATCAGTGACCCAAATAGGGTTCACAACCCAACCCTCTATTCTTGGGTTGAACTAGGTTGTTCGGTTTTTTTTGTTTTATAAT

mRNA sequence

AAATGAAATAATTTATTGGATATAAAATAAAAAATTAATTTTTTTATTGATCCGGAGAAATAAAATCGTACTCCAAATTTTACGGCCATTACTTCTCTGATCGGACTTTCTTTTCCACTGTCCTCTCTGAGTTAGGATCGACGTTCGCCGTTTTCTTCCTCCGACGGCCACATCGAGCCAGCGCCTTCCCTCCCTTTGCTTTCTCTGCTCCCGATTGCCGAACTGTCCAATTTCTCCAACGATTTTTCTCTCGTTTGATCGATTTCCAAGTCGCGGGGCTTTCCAGTTTCCAATTGAAACAGGATTTGCTTATTATTATCGATGGGTTCAGACGTGGAGGCTGTGGAAATTAGTAACTTGGAAAGGGGTCTATTGTCTGAATGCAATTCTGATTTGGAACCTGAAATCGACGATGAGCCCGTGTTGTTTGCAGCTTCCTTCCAAGAGATGGAAGACAGCTTTGTTAAGTATCATACAGCACAATGGGTCCTTTACTCCTTGCTTTTGATTTTAGCGTGGGGGATTGGGTTGTTGATGCTGCTTTATCTACCAATAAGACGATACGTTCTGCGAAAAGATATTCAATCGAAGAAGCTTTATCTTACACCAAATTCTATAATCTACAAGGTTACAAGACCTGTACCTTTTCCATGTTTTGGAGTATTGAAGAAAGAGAAGCATGTTTTGTTGCCTTCAGTGGCAGACATTATAGTTGAACAAGGATATCTACAGTCTCTCTATGGAGTTTACTCTCTTAGGATAGAGAATGCTGGCCTGAGAAGACCACCTGGTGATGACGTTCAAATTCAAGGAGTTACAGACCCAATTGCATTTAAAAAGGCTGTTCTAATGCGTCTCTCTGATATGAGGAATGATGGCAATGAAGAAGTTCCAAATACAAGGGCGGCATCTCCATCGAAATCTCTAAAGTACGACCCGTACTTCTATTCGGGGGAACGAGTACTTCAGAAAGTAGATGAGGTTGGAAGCTCTGTGAAGAGAATTCAAGCTTTGATTGAAGAACAACGGTCTCAAGCATCTAACCCTTTAGGATGAAATGTTTCGTTTAGATGCTGCTATCCGAGCACCGAAACGGTAGAAGACCAGTCCCAGTTTTACGAGGATTGGAGCCGAATAAGCTGAAGAAAATGTACTTCTAATGACTAAGGTTTGTTCTAAACTCTCCTCTATGGCTGATGAGTTGATGAGTATCAATTACCATTAATGAACTGATTGAGGCTGAAGTTTTCTGCAAGAAAGGTTCAAGTTTTTATTCTTGCTTGTATAGATAGATGTATTTTTACCCTTGAAAACCACCCTTAAAAGTATATATGTTATACATATGGTTTTGGTTTTTTATAGCTTAAATTAAACGTTTAGTTCTTAAACTTCAAGATCGTGTTCATCGAGCTTCTAACCTTGAACGAATATCTTATAAGTTCTTGACATTCCAAATATGCTGATAGATCCCATAAACTTTCGATGTTATGCTTAATAGAGTAGATTTTTTTGCTTTTCGTGTTCGTGTTATTGTTACGGTTTCTATTTCGAATAATCAAACAACTTTTTCATTTATTGCATGCCATGTGATTTTACATTATTGGGAGTGGTTGGATATACTCCTAATGACATAGGAGGCATTAAAATGATTATTATAGTTTTTCTTTTAGAACAATCAAACTACTAATGCTTGGTATGGTATGGTATAGCTAATTAATGAACTTTATCGTACTCTTTTGCGTTCGGTTTGAAATTAATAGGCTCGTTCTTAGGGGTGCACATGGGTGGATTGGAATTTTTTTTGGACCAGCCCGAGATTTTGGGTTGGTCAGATCAGTGACCCAAATAGGGTTCACAACCCAACCCTCTATTCTTGGGTTGAACTAGGTTGTTCGGTTTTTTTTGTTTTATAAT

Coding sequence (CDS)

ATGGGTTCAGACGTGGAGGCTGTGGAAATTAGTAACTTGGAAAGGGGTCTATTGTCTGAATGCAATTCTGATTTGGAACCTGAAATCGACGATGAGCCCGTGTTGTTTGCAGCTTCCTTCCAAGAGATGGAAGACAGCTTTGTTAAGTATCATACAGCACAATGGGTCCTTTACTCCTTGCTTTTGATTTTAGCGTGGGGGATTGGGTTGTTGATGCTGCTTTATCTACCAATAAGACGATACGTTCTGCGAAAAGATATTCAATCGAAGAAGCTTTATCTTACACCAAATTCTATAATCTACAAGGTTACAAGACCTGTACCTTTTCCATGTTTTGGAGTATTGAAGAAAGAGAAGCATGTTTTGTTGCCTTCAGTGGCAGACATTATAGTTGAACAAGGATATCTACAGTCTCTCTATGGAGTTTACTCTCTTAGGATAGAGAATGCTGGCCTGAGAAGACCACCTGGTGATGACGTTCAAATTCAAGGAGTTACAGACCCAATTGCATTTAAAAAGGCTGTTCTAATGCGTCTCTCTGATATGAGGAATGATGGCAATGAAGAAGTTCCAAATACAAGGGCGGCATCTCCATCGAAATCTCTAAAGTACGACCCGTACTTCTATTCGGGGGAACGAGTACTTCAGAAAGTAGATGAGGTTGGAAGCTCTGTGAAGAGAATTCAAGCTTTGATTGAAGAACAACGGTCTCAAGCATCTAACCCTTTAGGATGA

Protein sequence

MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSIIYKVTRPVPFPCFGVLKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLSDMRNDGNEEVPNTRAASPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQASNPLG

Homology

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BLAST of Carg12939 vs. NCBI nr
Match: XP_022961184.1 (uncharacterized protein LOC111461774 [Cucurbita moschata] >XP_022961185.1 uncharacterized protein LOC111461774 [Cucurbita moschata] >XP_023517001.1 uncharacterized protein LOC111780744 [Cucurbita pepo subsp. pepo] >XP_023517002.1 uncharacterized protein LOC111780744 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 476.9 bits (1226), Expect = 4.2e-131
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSL 60
           MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSL
Sbjct: 1   MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSL 60

Query: 61  LLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSIIYKVTRPVPFPCFGVLKKEKH 120
           LLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSIIYKVTRPVPFPCFGVLKKEKH
Sbjct: 61  LLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSIIYKVTRPVPFPCFGVLKKEKH 120

Query: 121 VLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLS 180
           VLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLS
Sbjct: 121 VLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLS 180

Query: 181 DMRNDGNEEVPNTRAASPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQAS 240
           DMRNDGNEEVPNTRAASPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQAS
Sbjct: 181 DMRNDGNEEVPNTRAASPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQAS 240

Query: 241 NPL 244
           NPL
Sbjct: 241 NPL 243

[Close]

BLAST of Carg12939 vs. NCBI nr
Match: XP_022988300.1 (uncharacterized protein LOC111485590 [Cucurbita maxima] >XP_022988301.1 uncharacterized protein LOC111485590 [Cucurbita maxima])

HSP 1 Score: 471.9 bits (1213), Expect = 1.4e-129
Identity = 240/243 (98.77%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSL 60
           MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSL
Sbjct: 1   MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSL 60

Query: 61  LLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSIIYKVTRPVPFPCFGVLKKEKH 120
           LLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSIIYKVTRPVPFPCFGVLKKEKH
Sbjct: 61  LLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSIIYKVTRPVPFPCFGVLKKEKH 120

Query: 121 VLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLS 180
           VLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLS
Sbjct: 121 VLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLS 180

Query: 181 DMRNDGNEEVPNTRAASPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQAS 240
           DMRNDG+EEVPNTR  SPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQAS
Sbjct: 181 DMRNDGSEEVPNTRVTSPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQAS 240

Query: 241 NPL 244
           NPL
Sbjct: 241 NPL 243

[Close]

BLAST of Carg12939 vs. NCBI nr
Match: XP_008450957.1 (PREDICTED: uncharacterized protein LOC103492393 isoform X1 [Cucumis melo] >XP_008450958.1 PREDICTED: uncharacterized protein LOC103492393 isoform X1 [Cucumis melo] >XP_016900913.1 PREDICTED: uncharacterized protein LOC103492393 isoform X1 [Cucumis melo])

HSP 1 Score: 421.0 bits (1081), Expect = 2.7e-114
Identity = 214/250 (85.60%), Postives = 232/250 (92.80%), Query Frame = 0


Query: 1   MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSL 60
           MGSD E VEIS+LERGLLSEC+SDLEPE DDEPVLFAASFQEMED+FVKYHTAQWVLYSL
Sbjct: 1   MGSDEEVVEISSLERGLLSECSSDLEPESDDEPVLFAASFQEMEDNFVKYHTAQWVLYSL 60

Query: 61  LLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSIIYKVTRPVPFPCFGVLKKEKH 120
           LLILAWGIGLLMLLYLP+RRY+LRKD+QSK+LYLTPNSI+YKVTRPVPFPCFGVLKKEKH
Sbjct: 61  LLILAWGIGLLMLLYLPVRRYILRKDLQSKRLYLTPNSIVYKVTRPVPFPCFGVLKKEKH 120

Query: 121 VLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLS 180
           VLLPSVADII+EQGYL+SLYGVYS+RIENAG+RRPPGDDV IQGV DPIAF+KAVLMRL+
Sbjct: 121 VLLPSVADIIIEQGYLESLYGVYSIRIENAGVRRPPGDDVHIQGVADPIAFRKAVLMRLA 180

Query: 181 DMRNDGN-------EEVPNTRAASPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIE 240
           DMR+DG        EEV NT+ ASPSKSLKYDPY YSGE+VLQKVDEVGSSVKR+QALIE
Sbjct: 181 DMRDDGKTSQISTIEEVLNTK-ASPSKSLKYDPYLYSGEQVLQKVDEVGSSVKRVQALIE 240

Query: 241 EQRSQASNPL 244
           EQRSQ SN L
Sbjct: 241 EQRSQVSNIL 249

[Close]

BLAST of Carg12939 vs. NCBI nr
Match: XP_022147532.1 (uncharacterized protein LOC111016439 [Momordica charantia] >XP_022147533.1 uncharacterized protein LOC111016439 [Momordica charantia])

HSP 1 Score: 409.8 bits (1052), Expect = 6.3e-111
Identity = 211/251 (84.06%), Postives = 225/251 (89.64%), Query Frame = 0


Query: 1   MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSL 60
           MGSD E VEIS+LERGLLSEC+SDLEPE DD+PVL+AASFQEME++FVKY+TAQWVLYSL
Sbjct: 1   MGSDEEVVEISSLERGLLSECSSDLEPETDDDPVLYAASFQEMEENFVKYYTAQWVLYSL 60

Query: 61  LLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSIIYKVTRPVPFPCFGVLKKEKH 120
           LLI AWGIGLLMLLYLP+RRY+LRKDIQSKKLYLTPN+IIYKVTRPV FPCFGVLKKEKH
Sbjct: 61  LLIFAWGIGLLMLLYLPVRRYILRKDIQSKKLYLTPNAIIYKVTRPVTFPCFGVLKKEKH 120

Query: 121 VLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLS 180
           VLLPSVA IIVEQGYLQS YGVYSLRIEN G+RRPP DDVQIQG+TDPIAFKKAV MRLS
Sbjct: 121 VLLPSVAXIIVEQGYLQSHYGVYSLRIENVGMRRPPSDDVQIQGITDPIAFKKAVQMRLS 180

Query: 181 DMRNDGN-------EEVPNTRAASPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIE 240
            MRNDG        EE PNTR ASPSKS KYDPY YSGE VLQKV+EVGSSVKR+Q LIE
Sbjct: 181 GMRNDGYSSQISTIEEAPNTR-ASPSKSQKYDPYIYSGEIVLQKVEEVGSSVKRVQTLIE 240

Query: 241 EQRSQASNPLG 245
           EQRSQ SNPLG
Sbjct: 241 EQRSQVSNPLG 250

[Close]

BLAST of Carg12939 vs. NCBI nr
Match: XP_011660032.1 (PREDICTED: uncharacterized protein LOC101212805 isoform X1 [Cucumis sativus] >XP_011660033.1 PREDICTED: uncharacterized protein LOC101212805 isoform X1 [Cucumis sativus])

HSP 1 Score: 407.1 bits (1045), Expect = 4.1e-110
Identity = 206/250 (82.40%), Postives = 227/250 (90.80%), Query Frame = 0


Query: 1   MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSL 60
           MGS  E VEIS+LERGLLSEC SDLEPE DDEPVLFAASFQEMED+FVKYHTAQWVLYSL
Sbjct: 1   MGSHEEVVEISSLERGLLSECRSDLEPESDDEPVLFAASFQEMEDNFVKYHTAQWVLYSL 60

Query: 61  LLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSIIYKVTRPVPFPCFGVLKKEKH 120
           LLILAWGIGLLMLLYLP+R+Y+LRKD QSK+LYLTPNSI+YKVTRPVP PCFGVLKKEKH
Sbjct: 61  LLILAWGIGLLMLLYLPVRKYILRKDFQSKRLYLTPNSIVYKVTRPVPLPCFGVLKKEKH 120

Query: 121 VLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLS 180
           VLLPSVADII+EQGYL+SLYGVYS+RIENAG+RRPPGDDV IQG+TDP+AF+KAVLMRL+
Sbjct: 121 VLLPSVADIIIEQGYLESLYGVYSIRIENAGVRRPPGDDVHIQGITDPVAFRKAVLMRLA 180

Query: 181 DMRNDGN-------EEVPNTRAASPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIE 240
            MR+DGN       EEV NT+ ASPSKS KYDPY YSGE+VLQKV+EVGSSVKR+QALIE
Sbjct: 181 GMRDDGNTSQISTIEEVLNTK-ASPSKSSKYDPYLYSGEQVLQKVEEVGSSVKRVQALIE 240

Query: 241 EQRSQASNPL 244
           E +SQ SN L
Sbjct: 241 EHQSQVSNIL 249

[Close]

BLAST of Carg12939 vs. TrEMBL
Match: tr|A0A1S4DY63|A0A1S4DY63_CUCME (uncharacterized protein LOC103492393 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492393 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 1.8e-114
Identity = 214/250 (85.60%), Postives = 232/250 (92.80%), Query Frame = 0


Query: 1   MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSL 60
           MGSD E VEIS+LERGLLSEC+SDLEPE DDEPVLFAASFQEMED+FVKYHTAQWVLYSL
Sbjct: 1   MGSDEEVVEISSLERGLLSECSSDLEPESDDEPVLFAASFQEMEDNFVKYHTAQWVLYSL 60

Query: 61  LLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSIIYKVTRPVPFPCFGVLKKEKH 120
           LLILAWGIGLLMLLYLP+RRY+LRKD+QSK+LYLTPNSI+YKVTRPVPFPCFGVLKKEKH
Sbjct: 61  LLILAWGIGLLMLLYLPVRRYILRKDLQSKRLYLTPNSIVYKVTRPVPFPCFGVLKKEKH 120

Query: 121 VLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLS 180
           VLLPSVADII+EQGYL+SLYGVYS+RIENAG+RRPPGDDV IQGV DPIAF+KAVLMRL+
Sbjct: 121 VLLPSVADIIIEQGYLESLYGVYSIRIENAGVRRPPGDDVHIQGVADPIAFRKAVLMRLA 180

Query: 181 DMRNDGN-------EEVPNTRAASPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIE 240
           DMR+DG        EEV NT+ ASPSKSLKYDPY YSGE+VLQKVDEVGSSVKR+QALIE
Sbjct: 181 DMRDDGKTSQISTIEEVLNTK-ASPSKSLKYDPYLYSGEQVLQKVDEVGSSVKRVQALIE 240

Query: 241 EQRSQASNPL 244
           EQRSQ SN L
Sbjct: 241 EQRSQVSNIL 249

[Close]

BLAST of Carg12939 vs. TrEMBL
Match: tr|A0A0A0LZM6|A0A0A0LZM6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G597740 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 2.7e-110
Identity = 206/250 (82.40%), Postives = 227/250 (90.80%), Query Frame = 0


Query: 1   MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSL 60
           MGS  E VEIS+LERGLLSEC SDLEPE DDEPVLFAASFQEMED+FVKYHTAQWVLYSL
Sbjct: 254 MGSHEEVVEISSLERGLLSECRSDLEPESDDEPVLFAASFQEMEDNFVKYHTAQWVLYSL 313

Query: 61  LLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSIIYKVTRPVPFPCFGVLKKEKH 120
           LLILAWGIGLLMLLYLP+R+Y+LRKD QSK+LYLTPNSI+YKVTRPVP PCFGVLKKEKH
Sbjct: 314 LLILAWGIGLLMLLYLPVRKYILRKDFQSKRLYLTPNSIVYKVTRPVPLPCFGVLKKEKH 373

Query: 121 VLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLS 180
           VLLPSVADII+EQGYL+SLYGVYS+RIENAG+RRPPGDDV IQG+TDP+AF+KAVLMRL+
Sbjct: 374 VLLPSVADIIIEQGYLESLYGVYSIRIENAGVRRPPGDDVHIQGITDPVAFRKAVLMRLA 433

Query: 181 DMRNDGN-------EEVPNTRAASPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIE 240
            MR+DGN       EEV NT+ ASPSKS KYDPY YSGE+VLQKV+EVGSSVKR+QALIE
Sbjct: 434 GMRDDGNTSQISTIEEVLNTK-ASPSKSSKYDPYLYSGEQVLQKVEEVGSSVKRVQALIE 493

Query: 241 EQRSQASNPL 244
           E +SQ SN L
Sbjct: 494 EHQSQVSNIL 502

[Close]

BLAST of Carg12939 vs. TrEMBL
Match: tr|A0A1S3BRI0|A0A1S3BRI0_CUCME (uncharacterized protein LOC103492393 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492393 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 9.4e-95
Identity = 184/243 (75.72%), Postives = 204/243 (83.95%), Query Frame = 0


Query: 1   MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSL 60
           MGSD E VEIS+LERGLLSEC+SDLEPE DDEPVLFAASFQEMED+FVKYHTAQWVLYSL
Sbjct: 1   MGSDEEVVEISSLERGLLSECSSDLEPESDDEPVLFAASFQEMEDNFVKYHTAQWVLYSL 60

Query: 61  LLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSIIYKVTRPVPFPCFGVLKKEKH 120
           LLILAWGIGLLMLLYLP+RRY+LRKD+QSK+LYLTPNSI+YKVTRPVPFPCFGVLKKEKH
Sbjct: 61  LLILAWGIGLLMLLYLPVRRYILRKDLQSKRLYLTPNSIVYKVTRPVPFPCFGVLKKEKH 120

Query: 121 VLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLS 180
           VLLPSVADII+EQGYL+SLYGVYS+RIENAG+RRPPGDDV IQGV DPIAF+KAVLMRL+
Sbjct: 121 VLLPSVADIIIEQGYLESLYGVYSIRIENAGVRRPPGDDVHIQGVADPIAFRKAVLMRLA 180

Query: 181 DMRNDGNEEVPNTRAASPSKSLKYDPYFYSGERVLQKVDEVGSSVKRIQALIEEQRSQAS 240
           DMR+DG     +T                        ++EV  + KR+QALIEEQRSQ S
Sbjct: 181 DMRDDGKTSQIST------------------------IEEV-LNTKRVQALIEEQRSQVS 218

Query: 241 NPL 244
           N L
Sbjct: 241 NIL 218

[Close]

BLAST of Carg12939 vs. TrEMBL
Match: tr|A0A1S3BPV0|A0A1S3BPV0_CUCME (uncharacterized protein LOC103492393 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492393 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.7e-91
Identity = 171/201 (85.07%), Postives = 187/201 (93.03%), Query Frame = 0


Query: 1   MGSDVEAVEISNLERGLLSECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQWVLYSL 60
           MGSD E VEIS+LERGLLSEC+SDLEPE DDEPVLFAASFQEMED+FVKYHTAQWVLYSL
Sbjct: 1   MGSDEEVVEISSLERGLLSECSSDLEPESDDEPVLFAASFQEMEDNFVKYHTAQWVLYSL 60

Query: 61  LLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSIIYKVTRPVPFPCFGVLKKEKH 120
           LLILAWGIGLLMLLYLP+RRY+LRKD+QSK+LYLTPNSI+YKVTRPVPFPCFGVLKKEKH
Sbjct: 61  LLILAWGIGLLMLLYLPVRRYILRKDLQSKRLYLTPNSIVYKVTRPVPFPCFGVLKKEKH 120

Query: 121 VLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKAVLMRLS 180
           VLLPSVADII+EQGYL+SLYGVYS+RIENAG+RRPPGDDV IQGV DPIAF+KAVLMRL+
Sbjct: 121 VLLPSVADIIIEQGYLESLYGVYSIRIENAGVRRPPGDDVHIQGVADPIAFRKAVLMRLA 180

Query: 181 DMRNDGN-------EEVPNTR 195
           DMR+DG        EEV NT+
Sbjct: 181 DMRDDGKTSQISTIEEVLNTK 201

[Close]

BLAST of Carg12939 vs. TrEMBL
Match: tr|A0A2P4HN84|A0A2P4HN84_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_38457 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 2.0e-89
Identity = 172/257 (66.93%), Postives = 214/257 (83.27%), Query Frame = 0


Query: 1   MGSDVEAVEISNLERGLL------SECNSDLEPEIDDEPVLFAASFQEMEDSFVKYHTAQ 60
           MGS  E VEI +LERGLL      S+ +   E E ++E VL+AASF+EME+++VKY TAQ
Sbjct: 1   MGSGNEVVEIDSLERGLLLSTPTGSQIHVGAEAEAEEETVLYAASFEEMEENYVKYQTAQ 60

Query: 61  WVLYSLLLILAWGIGLLMLLYLPIRRYVLRKDIQSKKLYLTPNSIIYKVTRPVPFPCFGV 120
           WVLYSLL+ILAWGIGL MLLY+P+RRY+LRKDI+S+KL+LTPNSI+YKVT+PVPFPCFGV
Sbjct: 61  WVLYSLLMILAWGIGLFMLLYVPVRRYILRKDIRSRKLFLTPNSIVYKVTKPVPFPCFGV 120

Query: 121 LKKEKHVLLPSVADIIVEQGYLQSLYGVYSLRIENAGLRRPPGDDVQIQGVTDPIAFKKA 180
           LKKEKHVLLPSV+D+++EQGYLQSL+GVYSLRIEN G+RRPP DDVQIQG+ +P AF+KA
Sbjct: 121 LKKEKHVLLPSVSDLVIEQGYLQSLFGVYSLRIENVGVRRPPSDDVQIQGIANPRAFRKA 180

Query: 181 VLMRLSDMRNDG-------NEEVPNTRAASPSKSLKYDPYFYSGERV-LQKVDEVGSSVK 240
           VLMRL++MR++G        E+VPN R  SPSKSL++D    SG+ + LQK++EVGSSVK
Sbjct: 181 VLMRLANMRSEGFSRQVSTIEDVPNFRLVSPSKSLRHDSIPQSGDLILLQKLEEVGSSVK 240

Query: 241 RIQALIEEQRSQASNPL 244
           R+Q LIEEQ+SQ S P+
Sbjct: 241 RVQTLIEEQQSQTSKPV 257

The following BLAST results are available for this feature:

BLAST of Carg12939 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961184.1	4.2e-131	100.00	uncharacterized protein LOC111461774 [Cucurbita moschata] >XP_022961185.1 unchar...	[more]
XP_022988300.1	1.4e-129	98.77	uncharacterized protein LOC111485590 [Cucurbita maxima] >XP_022988301.1 uncharac...	[more]
XP_008450957.1	2.7e-114	85.60	PREDICTED: uncharacterized protein LOC103492393 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_022147532.1	6.3e-111	84.06	uncharacterized protein LOC111016439 [Momordica charantia] >XP_022147533.1 uncha...	[more]
XP_011660032.1	4.1e-110	82.40	PREDICTED: uncharacterized protein LOC101212805 isoform X1 [Cucumis sativus] >XP...	[more]

BLAST of Carg12939 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Carg12939 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg12939 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DY63\|A0A1S4DY63_CUCME	1.8e-114	85.60	uncharacterized protein LOC103492393 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0LZM6\|A0A0A0LZM6_CUCSA	2.7e-110	82.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G597740 PE=3 SV=1	[more]
tr\|A0A1S3BRI0\|A0A1S3BRI0_CUCME	9.4e-95	75.72	uncharacterized protein LOC103492393 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3BPV0\|A0A1S3BPV0_CUCME	1.7e-91	85.07	uncharacterized protein LOC103492393 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2P4HN84\|A0A2P4HN84_QUESU	2.0e-89	66.93	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_38457 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12939-RA	Carg12939-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35410:SF1	SUBFAMILY NOT NAMED	coord: 1..240
None	No IPR available	PANTHER	PTHR35410	FAMILY NOT NAMED	coord: 1..240

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12939	Cla011137	Watermelon (97103) v1	carwmB0090
Carg12939	Csa1G597740	Cucumber (Chinese Long) v2	carcuB0101
Carg12939	MELO3C015545	Melon (DHL92) v3.5.1	carmeB0096
Carg12939	ClCG03G014820	Watermelon (Charleston Gray)	carwcgB0094
Carg12939	CSPI01G28950	Wild cucumber (PI 183967)	carcpiB0106
Carg12939	Cucsa.142000	Cucumber (Gy14) v1	carcgyB0112
Carg12939	CmaCh10G007860	Cucurbita maxima (Rimu)	carcmaB0119
Carg12939	CmoCh10G008140	Cucurbita moschata (Rifu)	carcmoB0128
Carg12939	Lsi06G003610	Bottle gourd (USVL1VR-Ls)	carlsiB086
Carg12939	CsGy1G028170	Cucumber (Gy14) v2	carcgybB0101
Carg12939	MELO3C015545.2	Melon (DHL92) v3.6.1	carmedB0098
Carg12939	CsaV3_1G041330	Cucumber (Chinese Long) v3	carcucB0109
Carg12939	Cla97C03G065070	Watermelon (97103) v2	carwmbB0094
Carg12939	Bhi02G001484	Wax gourd	carwgoB0110

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12939	Silver-seed gourd	carcarB103
Carg12939	Silver-seed gourd	carcarB108
Carg12939	Cucurbita maxima (Rimu)	carcmaB0120
Carg12939	Cucurbita maxima (Rimu)	carcmaB0121
Carg12939	Cucurbita moschata (Rifu)	carcmoB0129
Carg12939	Cucurbita moschata (Rifu)	carcmoB0130
Carg12939	Cucurbita pepo (Zucchini)	carcpeB0138
Carg12939	Cucurbita pepo (Zucchini)	carcpeB0141
Carg12939	Cucurbita pepo (Zucchini)	carcpeB0143