Carg12933 (gene) Silver-seed gourd

NameCarg12933
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat
LocationCucurbita_argyrosperma_scaffold_052 : 166591 .. 168447 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCGCTTCTTGCCCTTCAGCCCAGTGCATCCCCGATCAACTCCCCAAAAGTTCACACATCACCTATCCATGGCCTTAAGTCATGCTCATCCATGTCTGAGCTCAAGCAATATCACTCCCAGATCATCCGTCTTGGTCTTTCTACTGACAATGATGCCATGGGTCGTCTTGTCAAATTCTGTGCTGTATCCAAGAATGGAGACCTTGATTACGCACTTCTTTTGTTTAAGACAATCCCCAACCCAGATGCATACATCTACAATACCTTAATAAGAGGCTACTTACAACTCCAATTCCCTAGAGCTTGCTTACTGTTGTATTTGGAAATGCTGCATAAGCGTGTCCTTCCCAATAAATTTACATTTCCTTCTCTAATTCGTGCTTGCTGCATCGATAATGCTATCGAGGAAGGGAAGCAAATTCATGCTCATGTTCTTAAATTTGGCTTCAGAACAGATAGATTTTCTCAGAACAATTTGATTCATATGTATGCTAATTTTCAATCCTTGGAAGAAGCCAGAAGGGTCTTCGATGGTATTGAGCTACCCGATGTTGTGTCATGGACCACTCTGCTTACTGGGTATGCTCTGTGTGGATTTCTAGATGAAGCCTTACAAGTTTTCGAGTCGATGCCCGAGCGCAGCTCTGCTTCTTGGAATGCCATGATTTCTTCTTTTGTCCAAAACAATCGATTTCATGAAGCATTTGCTTTGTTTAATCGGATGAGGTCGGAGAAGATTGTGTTGGACAAATACATGGCTGCTAGCATGTTATCAGCTTGCACAGGATTGGGAGCACTTGAACAAGGAATGTGGATACACAGATACATCAAGAAAAGTGAGATCAAATTAGACTCGAAACTTGCAACGACGCTCATCGACATGTATTGTAAATGCGGTTGCCTGGATCGTGCTTTTGAAGTGTTCACTCAGTTGCCAGAAAAGGGCATTTCTTCATGGAATTGCATGATTGGAGGGATGGCTATGCACGGGAAAGGAGAGGCAGCCATTGAGCTTTTCAAAGACATGGAGACCAAAATGGTGACACCAGACAACATAACTTTCCTTAATGTTCTCAATGCTTGTGCTCACTCCGGGTTAGTTGAAAAGGGACGCTACTATTTCAATCATTTCACTCAAGTTTACGATATTAAACCCAGAACAGAACATTATGGATGCATGGTTGATTTATATGGACGAGCCGGGATGCTAGACGAAGCGATGAACCTCATACGTGAGATGCCAATGAGTCCCGACGCCGGAGTGTTAGGTGCCTTCGTTGGAGCATGTAAAATCCATGGGAACGTAGACATGGGGGAGGAAATAGGCAAGAGAGTAATAGAACTAGATCCAAGCAATAGCGGGCGCTACGTTCTACTCGGAAATCTGTACGCCGAGGCCGGTAGATGGGACGGTGTAGCAGAAGTACGAAAGCTAATGAATGATAGAGAAGTGAAGAAGGCTGCTGGGTTTTCCATGATTGAATTGGAGGGCGTGGTGCATGAATTCATTGCAGGAGGAAGGGGTCACCCAGAAGCCAATGAAATATATGGCAAAGTTAAGGAGATGGTAGAATGTATAAGATGTGTAGGATATGTAACCGAGGAGGAGGAGGAGGTGGAGAAGGACAACCCTGTTTACTACCATAGTGAGAAACTGGCAGTTGCTTATGGATTGCTCAAGACTCGAGCAGGGGAAACGCTTCGAATCACTAAGAATCTGCGGGTCTGTAAGGACTGTCACCAAGCTCTTAAGCTTGTTTCTAAGGTGTTTCAACGGAAGATCATTGTGAGAGATAGAAATCGTTTCCATCATTTTGCTGATGGAGAGTGTTCTTGTAATGATTATTGGTAA

mRNA sequence

ATGTCATCGCTTCTTGCCCTTCAGCCCAGTGCATCCCCGATCAACTCCCCAAAAGTTCACACATCACCTATCCATGGCCTTAAGTCATGCTCATCCATGTCTGAGCTCAAGCAATATCACTCCCAGATCATCCGTCTTGGTCTTTCTACTGACAATGATGCCATGGGTCGTCTTGTCAAATTCTGTGCTGTATCCAAGAATGGAGACCTTGATTACGCACTTCTTTTGTTTAAGACAATCCCCAACCCAGATGCATACATCTACAATACCTTAATAAGAGGCTACTTACAACTCCAATTCCCTAGAGCTTGCTTACTGTTGTATTTGGAAATGCTGCATAAGCGTGTCCTTCCCAATAAATTTACATTTCCTTCTCTAATTCGTGCTTGCTGCATCGATAATGCTATCGAGGAAGGGAAGCAAATTCATGCTCATGTTCTTAAATTTGGCTTCAGAACAGATAGATTTTCTCAGAACAATTTGATTCATATGTATGCTAATTTTCAATCCTTGGAAGAAGCCAGAAGGGTCTTCGATGGTATTGAGCTACCCGATGTTGTGTCATGGACCACTCTGCTTACTGGGTATGCTCTGTGTGGATTTCTAGATGAAGCCTTACAAGTTTTCGAGTCGATGCCCGAGCGCAGCTCTGCTTCTTGGAATGCCATGATTTCTTCTTTTGTCCAAAACAATCGATTTCATGAAGCATTTGCTTTGTTTAATCGGATGAGGTCGGAGAAGATTGTGTTGGACAAATACATGGCTGCTAGCATGTTATCAGCTTGCACAGGATTGGGAGCACTTGAACAAGGAATGTGGATACACAGATACATCAAGAAAAGTGAGATCAAATTAGACTCGAAACTTGCAACGACGCTCATCGACATGTATTGTAAATGCGGTTGCCTGGATCGTGCTTTTGAAGTGTTCACTCAGTTGCCAGAAAAGGGCATTTCTTCATGGAATTGCATGATTGGAGGGATGGCTATGCACGGGAAAGGAGAGGCAGCCATTGAGCTTTTCAAAGACATGGAGACCAAAATGGTGACACCAGACAACATAACTTTCCTTAATGTTCTCAATGCTTGTGCTCACTCCGGGTTAGTTGAAAAGGGACGCTACTATTTCAATCATTTCACTCAAGTTTACGATATTAAACCCAGAACAGAACATTATGGATGCATGGTTGATTTATATGGACGAGCCGGGATGCTAGACGAAGCGATGAACCTCATACGTGAGATGCCAATGAGTCCCGACGCCGGAGTGTTAGGTGCCTTCGTTGGAGCATGTAAAATCCATGGGAACGTAGACATGGGGGAGGAAATAGGCAAGAGAGTAATAGAACTAGATCCAAGCAATAGCGGGCGCTACGTTCTACTCGGAAATCTGTACGCCGAGGCCGGTAGATGGGACGGTGTAGCAGAAGTACGAAAGCTAATGAATGATAGAGAAGTGAAGAAGGCTGCTGGGTTTTCCATGATTGAATTGGAGGGCGTGGTGCATGAATTCATTGCAGGAGGAAGGGGTCACCCAGAAGCCAATGAAATATATGGCAAAGTTAAGGAGATGGTAGAATGTATAAGATGTGTAGGATATGTAACCGAGGAGGAGGAGGAGGTGGAGAAGGACAACCCTGTTTACTACCATAGTGAGAAACTGGCAGTTGCTTATGGATTGCTCAAGACTCGAGCAGGGGAAACGCTTCGAATCACTAAGAATCTGCGGGTCTGTAAGGACTGTCACCAAGCTCTTAAGCTTGTTTCTAAGGTGTTTCAACGGAAGATCATTGTGAGAGATAGAAATCGTTTCCATCATTTTGCTGATGGAGAGTGTTCTTGTAATGATTATTGGTAA

Coding sequence (CDS)

ATGTCATCGCTTCTTGCCCTTCAGCCCAGTGCATCCCCGATCAACTCCCCAAAAGTTCACACATCACCTATCCATGGCCTTAAGTCATGCTCATCCATGTCTGAGCTCAAGCAATATCACTCCCAGATCATCCGTCTTGGTCTTTCTACTGACAATGATGCCATGGGTCGTCTTGTCAAATTCTGTGCTGTATCCAAGAATGGAGACCTTGATTACGCACTTCTTTTGTTTAAGACAATCCCCAACCCAGATGCATACATCTACAATACCTTAATAAGAGGCTACTTACAACTCCAATTCCCTAGAGCTTGCTTACTGTTGTATTTGGAAATGCTGCATAAGCGTGTCCTTCCCAATAAATTTACATTTCCTTCTCTAATTCGTGCTTGCTGCATCGATAATGCTATCGAGGAAGGGAAGCAAATTCATGCTCATGTTCTTAAATTTGGCTTCAGAACAGATAGATTTTCTCAGAACAATTTGATTCATATGTATGCTAATTTTCAATCCTTGGAAGAAGCCAGAAGGGTCTTCGATGGTATTGAGCTACCCGATGTTGTGTCATGGACCACTCTGCTTACTGGGTATGCTCTGTGTGGATTTCTAGATGAAGCCTTACAAGTTTTCGAGTCGATGCCCGAGCGCAGCTCTGCTTCTTGGAATGCCATGATTTCTTCTTTTGTCCAAAACAATCGATTTCATGAAGCATTTGCTTTGTTTAATCGGATGAGGTCGGAGAAGATTGTGTTGGACAAATACATGGCTGCTAGCATGTTATCAGCTTGCACAGGATTGGGAGCACTTGAACAAGGAATGTGGATACACAGATACATCAAGAAAAGTGAGATCAAATTAGACTCGAAACTTGCAACGACGCTCATCGACATGTATTGTAAATGCGGTTGCCTGGATCGTGCTTTTGAAGTGTTCACTCAGTTGCCAGAAAAGGGCATTTCTTCATGGAATTGCATGATTGGAGGGATGGCTATGCACGGGAAAGGAGAGGCAGCCATTGAGCTTTTCAAAGACATGGAGACCAAAATGGTGACACCAGACAACATAACTTTCCTTAATGTTCTCAATGCTTGTGCTCACTCCGGGTTAGTTGAAAAGGGACGCTACTATTTCAATCATTTCACTCAAGTTTACGATATTAAACCCAGAACAGAACATTATGGATGCATGGTTGATTTATATGGACGAGCCGGGATGCTAGACGAAGCGATGAACCTCATACGTGAGATGCCAATGAGTCCCGACGCCGGAGTGTTAGGTGCCTTCGTTGGAGCATGTAAAATCCATGGGAACGTAGACATGGGGGAGGAAATAGGCAAGAGAGTAATAGAACTAGATCCAAGCAATAGCGGGCGCTACGTTCTACTCGGAAATCTGTACGCCGAGGCCGGTAGATGGGACGGTGTAGCAGAAGTACGAAAGCTAATGAATGATAGAGAAGTGAAGAAGGCTGCTGGGTTTTCCATGATTGAATTGGAGGGCGTGGTGCATGAATTCATTGCAGGAGGAAGGGGTCACCCAGAAGCCAATGAAATATATGGCAAAGTTAAGGAGATGGTAGAATGTATAAGATGTGTAGGATATGTAACCGAGGAGGAGGAGGAGGTGGAGAAGGACAACCCTGTTTACTACCATAGTGAGAAACTGGCAGTTGCTTATGGATTGCTCAAGACTCGAGCAGGGGAAACGCTTCGAATCACTAAGAATCTGCGGGTCTGTAAGGACTGTCACCAAGCTCTTAAGCTTGTTTCTAAGGTGTTTCAACGGAAGATCATTGTGAGAGATAGAAATCGTTTCCATCATTTTGCTGATGGAGAGTGTTCTTGTAATGATTATTGGTAA

Protein sequence

MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKRVLPNKFTFPSLIRACCIDNAIEEGKQIHAHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDVVSWTTLLTGYALCGFLDEALQVFESMPERSSASWNAMISSFVQNNRFHEAFALFNRMRSEKIVLDKYMAASMLSACTGLGALEQGMWIHRYIKKSEIKLDSKLATTLIDMYCKCGCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVLNACAHSGLVEKGRYYFNHFTQVYDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPDAGVLGAFVGACKIHGNVDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKLMNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEANEIYGKVKEMVECIRCVGYVTEEEEEVEKDNPVYYHSEKLAVAYGLLKTRAGETLRITKNLRVCKDCHQALKLVSKVFQRKIIVRDRNRFHHFADGECSCNDYW
BLAST of Carg12933 vs. NCBI nr
Match: XP_022960820.1 (pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita moschata])

HSP 1 Score: 1124.4 bits (2907), Expect = 0.0e+00
Identity = 615/618 (99.51%), Postives = 615/618 (99.51%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
           MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK
Sbjct: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60

Query: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKRVLPNK 120
           FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHK VLPNK
Sbjct: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120

Query: 121 FTFPSLIRACCIDNAIEEGKQIHAHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
           FTFPSLIRACCIDNAIEEGKQIH HVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180

Query: 181 IELPDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           IELPDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 IELPDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXSEKIVLDKYMAASMLSACTGLGALEQGMWIHRYIKKSEIKLDSKLATTLIDMYCKC 300
           XXXX EKIVLDKYMAASMLSACTGLGALEQGMWIHRYIKKSEIKLDSKLATTLIDMYCKC
Sbjct: 241 XXXXXEKIVLDKYMAASMLSACTGLGALEQGMWIHRYIKKSEIKLDSKLATTLIDMYCKC 300

Query: 301 GCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVL 360
           GCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVL
Sbjct: 301 GCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVL 360

Query: 361 NACAHSGLVEKGRYYFNHFTQVYDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPD 420
           NACAHSGLVEKGRYYFNHFTQVYDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPD
Sbjct: 361 NACAHSGLVEKGRYYFNHFTQVYDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPD 420

Query: 421 AGVLGAFVGACKIHGNVDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKL 480
           AGVLGAFVGACKIHGNVDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKL
Sbjct: 421 AGVLGAFVGACKIHGNVDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKL 480

Query: 481 MNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEANEIYGKVKEMVECIRCVGYVTEEEEE 540
           MNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEANEIYGKVKEMVECIRCVGYVTEEEEE
Sbjct: 481 MNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEANEIYGKVKEMVECIRCVGYVTEEEEE 540

Query: 541 VEKDNPVYYHSEKLAVAYGLLKTRAGETLRITKNLRVCKDCHQALKLVSKVFQRKIIVRD 600
           VEKDNPVYYHSEKLAVAYGLLKTRAGETLRITKNLRVCKDCHQALKLVSKVFQRKIIVRD
Sbjct: 541 VEKDNPVYYHSEKLAVAYGLLKTRAGETLRITKNLRVCKDCHQALKLVSKVFQRKIIVRD 600

Query: 601 RNRFHHFADGECSCNDYW 619
           RNRFHHFADGECSCNDYW
Sbjct: 601 RNRFHHFADGECSCNDYW 618

BLAST of Carg12933 vs. NCBI nr
Match: XP_023515687.1 (pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1094.3 bits (2829), Expect = 0.0e+00
Identity = 601/620 (96.94%), Postives = 606/620 (97.74%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
           MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK
Sbjct: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60

Query: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKRVLPNK 120
           FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHK VLPNK
Sbjct: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120

Query: 121 FTFPSLIRACCIDNAIEEGKQIHAHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
           FTFPSLIRACCIDNAIEEGKQIH HVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180

Query: 181 IELPDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           IELPD  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 IELPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXSEKIVLDKYMAASMLSACTGLGALEQGMWIHRYIKKSEIKLDSKLATTLIDMYCKC 300
           XXXXSEKIVLDKYMAASMLSACTGLG+LEQGMWIHRYIKKSEIKLDSKLATTLIDMYCKC
Sbjct: 241 XXXXSEKIVLDKYMAASMLSACTGLGSLEQGMWIHRYIKKSEIKLDSKLATTLIDMYCKC 300

Query: 301 GCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVL 360
           GCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVL
Sbjct: 301 GCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVL 360

Query: 361 NACAHSGLVEKGRYYFNHFTQVYDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPD 420
           NACAHSGLVEKGRYYFNHFTQVYDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPD
Sbjct: 361 NACAHSGLVEKGRYYFNHFTQVYDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPD 420

Query: 421 AGVLGAFVGACKIHGNVDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKL 480
           AGVLGAFVGACKIHGN+DMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKL
Sbjct: 421 AGVLGAFVGACKIHGNIDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKL 480

Query: 481 MNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEANEIYGKVKEMVECIRCVGYVTE--EE 540
           MNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEA EIYGKV EMVECIRCVGYVTE    
Sbjct: 481 MNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEAKEIYGKVNEMVECIRCVGYVTEXXXX 540

Query: 541 EEVEKDNPVYYHSEKLAVAYGLLKTRAGETLRITKNLRVCKDCHQALKLVSKVFQRKIIV 600
              EKDNPVYYHSEKLAVA+GLLKT+AGETLRITKNLRVCKDCHQALKLVSKVF+RKIIV
Sbjct: 541 XXXEKDNPVYYHSEKLAVAFGLLKTKAGETLRITKNLRVCKDCHQALKLVSKVFERKIIV 600

Query: 601 RDRNRFHHFADGECSCNDYW 619
           RDRNRFHHF DGECSCNDYW
Sbjct: 601 RDRNRFHHFDDGECSCNDYW 620

BLAST of Carg12933 vs. NCBI nr
Match: XP_022987211.1 (pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima] >XP_022987212.1 pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima])

HSP 1 Score: 1057.4 bits (2733), Expect = 1.9e-305
Identity = 585/620 (94.35%), Postives = 593/620 (95.65%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
           MSSLLALQ SASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK
Sbjct: 1   MSSLLALQLSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60

Query: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKRVLPNK 120
           FCAV KNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHK VLPNK
Sbjct: 61  FCAVCKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120

Query: 121 FTFPSLIRACCIDNAIEEGKQIHAHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
           FTFPSLIRACCIDNAIEEGKQIHAHVLKFGFR DRFSQNNLIHMYANFQSLEEARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQIHAHVLKFGFRADRFSQNNLIHMYANFQSLEEARRVFDG 180

Query: 181 IELPDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           IELPDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 IELPDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXSEKIVLDKYMAASMLSACTGLGALEQGMWIHRYIKKSEIKLDSKLATTLIDMYCKC 300
           XXXX EKIVLDKYMAASMLSACTGLGALEQG+WIHRYIKKSEIKLDSKLATTLIDMYCKC
Sbjct: 241 XXXXXEKIVLDKYMAASMLSACTGLGALEQGIWIHRYIKKSEIKLDSKLATTLIDMYCKC 300

Query: 301 GCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVL 360
           GCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVL
Sbjct: 301 GCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVL 360

Query: 361 NACAHSGLVEKGRYYFNHFTQVYDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPD 420
           NACAHSGLVEKGRYYFNHF+QVYDIKPRTEHYGCMVDLYGR+GMLDEAM LIREMPMSPD
Sbjct: 361 NACAHSGLVEKGRYYFNHFSQVYDIKPRTEHYGCMVDLYGRSGMLDEAMKLIREMPMSPD 420

Query: 421 AGVLGAFVGACKIHGNVDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKL 480
           AGVLGAFVGACKIHGN+DMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWD VAEVRKL
Sbjct: 421 AGVLGAFVGACKIHGNIDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWDSVAEVRKL 480

Query: 481 MNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEANEIYGKVKEMVECI--RCVGYVTEEE 540
           MNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEA EIYGKV EM+ECI            
Sbjct: 481 MNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEAKEIYGKVNEMIECIXXXXXXXXXXXX 540

Query: 541 EEVEKDNPVYYHSEKLAVAYGLLKTRAGETLRITKNLRVCKDCHQALKLVSKVFQRKIIV 600
                DNPVYYHSEKLAVA+GLLKT+AGETLRITKNLRVCKDCHQALKLVSKVF+RK IV
Sbjct: 541 XXXXXDNPVYYHSEKLAVAFGLLKTQAGETLRITKNLRVCKDCHQALKLVSKVFERKFIV 600

Query: 601 RDRNRFHHFADGECSCNDYW 619
           RDRNRFHHFADGECSCNDYW
Sbjct: 601 RDRNRFHHFADGECSCNDYW 620

BLAST of Carg12933 vs. NCBI nr
Match: XP_022138850.1 (uncharacterized protein LOC111009921 isoform X1 [Momordica charantia])

HSP 1 Score: 942.2 bits (2434), Expect = 9.0e-271
Identity = 522/601 (86.86%), Postives = 563/601 (93.68%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
           M  LLALQP+AS INS +VHTSPIHGL+SCSSMSELKQ+HSQIIRLGLS DNDAMGRL+K
Sbjct: 1   MPPLLALQPTASVINSSRVHTSPIHGLQSCSSMSELKQFHSQIIRLGLSIDNDAMGRLIK 60

Query: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKRVLPNK 120
           FCAVSKNGDLDYALLLFKTIP PDA+IYNTLIRGYLQ Q  RAC+LLYL+MLHK VLPNK
Sbjct: 61  FCAVSKNGDLDYALLLFKTIPYPDAFIYNTLIRGYLQQQSSRACILLYLQMLHKVVLPNK 120

Query: 121 FTFPSLIRACCIDNAIEEGKQIHAHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
           FTFPSLIRACCIDNAIEEGKQ+HAHVLKFGFRTD FSQNNLIHMYANFQSLE+ARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQVHAHVLKFGFRTDIFSQNNLIHMYANFQSLEDARRVFDG 180

Query: 181 IELPDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           IELPD V  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 IELPDAVTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXSEKIVLDKYMAASMLSACTGLGALEQGMWIHRYIKKSEIKLDSKLATTLIDMYCKC 300
           XXXXSEKIVLDKY+AASMLSACTGLGALEQG WIHRYIKKS I+LDSKLATTLIDMYCKC
Sbjct: 241 XXXXSEKIVLDKYVAASMLSACTGLGALEQGKWIHRYIKKSGIELDSKLATTLIDMYCKC 300

Query: 301 GCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVL 360
           GCLD AF VFT LPEKGISSWNCMIGGMAMHG+GEAAIELFK+ME KMVTPDNITFLNVL
Sbjct: 301 GCLDCAFSVFTHLPEKGISSWNCMIGGMAMHGRGEAAIELFKEMEMKMVTPDNITFLNVL 360

Query: 361 NACAHSGLVEKGRYYFNHFTQVYDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPD 420
           +ACAHSGLVE+GR+YF HF ++Y I+PRTEH+GCMVDLYGRAGML+EAM LI EMPM+PD
Sbjct: 361 SACAHSGLVEEGRHYFRHFIELYGIEPRTEHFGCMVDLYGRAGMLEEAMKLISEMPMNPD 420

Query: 421 AGVLGAFVGACKIHGNVDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKL 480
           AGVLGA VGACKIHG+VD+GEEIG RVIEL+P+NSGRYVLLGNLYA+AGRW+ VAEVRKL
Sbjct: 421 AGVLGALVGACKIHGDVDLGEEIGLRVIELEPTNSGRYVLLGNLYAKAGRWEDVAEVRKL 480

Query: 481 MNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEANEIYGKVKEMVECIRCVGYVTEEEEE 540
           MNDREVKKA GFSMIELEGVV+EFIAGGR HPEA++IY KV EM+ECIR VGYV E E +
Sbjct: 481 MNDREVKKAPGFSMIELEGVVYEFIAGGRAHPEADKIYVKVNEMLECIRYVGYVPENEID 540

Query: 541 VEKDNPVYYHSEKLAVAYGLLKTRAGETLRITKNLRVCKDCHQALKLVSKVFQRKIIVRD 600
           V+KDNP+YYHSEKLAVA+GLLKT+AGETLRITKNLR+CKDCHQALKLVSKVF+RKII+  
Sbjct: 541 VDKDNPIYYHSEKLAVAFGLLKTKAGETLRITKNLRICKDCHQALKLVSKVFERKIILEH 600

Query: 601 R 602
           R
Sbjct: 601 R 601

BLAST of Carg12933 vs. NCBI nr
Match: XP_022138851.1 (uncharacterized protein LOC111009921 isoform X2 [Momordica charantia])

HSP 1 Score: 942.2 bits (2434), Expect = 9.0e-271
Identity = 522/601 (86.86%), Postives = 563/601 (93.68%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
           M  LLALQP+AS INS +VHTSPIHGL+SCSSMSELKQ+HSQIIRLGLS DNDAMGRL+K
Sbjct: 1   MPPLLALQPTASVINSSRVHTSPIHGLQSCSSMSELKQFHSQIIRLGLSIDNDAMGRLIK 60

Query: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKRVLPNK 120
           FCAVSKNGDLDYALLLFKTIP PDA+IYNTLIRGYLQ Q  RAC+LLYL+MLHK VLPNK
Sbjct: 61  FCAVSKNGDLDYALLLFKTIPYPDAFIYNTLIRGYLQQQSSRACILLYLQMLHKVVLPNK 120

Query: 121 FTFPSLIRACCIDNAIEEGKQIHAHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
           FTFPSLIRACCIDNAIEEGKQ+HAHVLKFGFRTD FSQNNLIHMYANFQSLE+ARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQVHAHVLKFGFRTDIFSQNNLIHMYANFQSLEDARRVFDG 180

Query: 181 IELPDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           IELPD V  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 IELPDAVTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXSEKIVLDKYMAASMLSACTGLGALEQGMWIHRYIKKSEIKLDSKLATTLIDMYCKC 300
           XXXXSEKIVLDKY+AASMLSACTGLGALEQG WIHRYIKKS I+LDSKLATTLIDMYCKC
Sbjct: 241 XXXXSEKIVLDKYVAASMLSACTGLGALEQGKWIHRYIKKSGIELDSKLATTLIDMYCKC 300

Query: 301 GCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVL 360
           GCLD AF VFT LPEKGISSWNCMIGGMAMHG+GEAAIELFK+ME KMVTPDNITFLNVL
Sbjct: 301 GCLDCAFSVFTHLPEKGISSWNCMIGGMAMHGRGEAAIELFKEMEMKMVTPDNITFLNVL 360

Query: 361 NACAHSGLVEKGRYYFNHFTQVYDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPD 420
           +ACAHSGLVE+GR+YF HF ++Y I+PRTEH+GCMVDLYGRAGML+EAM LI EMPM+PD
Sbjct: 361 SACAHSGLVEEGRHYFRHFIELYGIEPRTEHFGCMVDLYGRAGMLEEAMKLISEMPMNPD 420

Query: 421 AGVLGAFVGACKIHGNVDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKL 480
           AGVLGA VGACKIHG+VD+GEEIG RVIEL+P+NSGRYVLLGNLYA+AGRW+ VAEVRKL
Sbjct: 421 AGVLGALVGACKIHGDVDLGEEIGLRVIELEPTNSGRYVLLGNLYAKAGRWEDVAEVRKL 480

Query: 481 MNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEANEIYGKVKEMVECIRCVGYVTEEEEE 540
           MNDREVKKA GFSMIELEGVV+EFIAGGR HPEA++IY KV EM+ECIR VGYV E E +
Sbjct: 481 MNDREVKKAPGFSMIELEGVVYEFIAGGRAHPEADKIYVKVNEMLECIRYVGYVPENEID 540

Query: 541 VEKDNPVYYHSEKLAVAYGLLKTRAGETLRITKNLRVCKDCHQALKLVSKVFQRKIIVRD 600
           V+KDNP+YYHSEKLAVA+GLLKT+AGETLRITKNLR+CKDCHQALKLVSKVF+RKII+  
Sbjct: 541 VDKDNPIYYHSEKLAVAFGLLKTKAGETLRITKNLRICKDCHQALKLVSKVFERKIILEH 600

Query: 601 R 602
           R
Sbjct: 601 R 601

BLAST of Carg12933 vs. TAIR10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 487.3 bits (1253), Expect = 1.4e-137
Identity = 305/600 (50.83%), Postives = 402/600 (67.00%), Query Frame = 0

Query: 27  LKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSKNGD-LDYALLLFKTIPNPDA 86
           L+ CS   ELKQ H+++++ GL  D+ A+ + + FC  S + D L YA ++F     PD 
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80

Query: 87  YIYNTLIRGYLQLQFPRACLLLYLEMLHKRVLPNKFTFPSLIRACCIDNAIEEGKQIHAH 146
           +++N +IRG+     P   LLLY  ML      N +TFPSL++AC   +A EE  QIHA 
Sbjct: 81  FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140

Query: 147 VLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDVVXXXXXXXXXXXXXXXXXX 206
           + K G+  D ++ N+LI+ YA   + + A  +FD I  P   XXXXXXXXXXXXXXXXXX
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPXXXXXXXXXXXXXXXXXXXXX 200

Query: 207 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEKIVLDKYMAASMLSACTGL 266
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +  D    A+ LSAC  L
Sbjct: 201 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPDNVSLANALSACAQL 260

Query: 267 GALEQGMWIHRYIKKSEIKLDSKLATTLIDMYCKCGCLDRAFEVFTQLPEKGISSWNCMI 326
           GALEQG WIH Y+ K+ I++DS L   LIDMY KCG ++ A EVF  + +K + +W  +I
Sbjct: 261 GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALI 320

Query: 327 GGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVLNACAHSGLVEKGRYYFNHFTQVYDI 386
            G A HG G  AI  F +M+   + P+ ITF  VL AC+++GLVE+G+  F    + Y++
Sbjct: 321 SGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNL 380

Query: 387 KPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPDAGVLGAFVGACKIHGNVDMGEEIGK 446
           KP  EHYGC+VDL GRAG+LDEA   I+EMP+ P+A + GA + AC+IH N+++GEEIG+
Sbjct: 381 KPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGE 440

Query: 447 RVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKLMNDREVKKAAGFSMIELEGVVHEFI 506
            +I +DP + GRYV   N++A   +WD  AE R+LM ++ V K  G S I LEG  HEF+
Sbjct: 441 ILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFL 500

Query: 507 AGGRGHPEANEIYGKVKEMVECIRCVGYVTEEEE-------EVEKDNPVYYHSEKLAVAY 566
           AG R HPE  +I  K + M   +   GYV E EE       + E++  V+ HSEKLA+ Y
Sbjct: 501 AGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITY 560

Query: 567 GLLKTRAGETLRITKNLRVCKDCHQALKLVSKVFQRKIIVRDRNRFHHFADGECSCNDYW 619
           GL+KT+ G  +RI KNLRVCKDCH+  KL+SK+++R I++RDR RFHHF DG+CSC DYW
Sbjct: 561 GLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620

BLAST of Carg12933 vs. TAIR10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 463.0 bits (1190), Expect = 2.9e-130
Identity = 273/633 (43.13%), Postives = 392/633 (61.93%), Query Frame = 0

Query: 12  SPINSPKVHTSPIH-GLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVS--KNG 71
           SP +SP  H S +   + +C ++ +L Q H+  I+ G   D  A   +++FCA S   + 
Sbjct: 14  SPASSPASHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR 73

Query: 72  DLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACL---LLYLEMLHKRVLPNKFTFPS 131
           DLDYA  +F  +P  + + +NT+IRG+ +    +A +   L Y  M  + V PN+FTFPS
Sbjct: 74  DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133

Query: 132 LIRACCIDNAIEEGKQIHAHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVF------- 191
           +++AC     I+EGKQIH   LK+GF  D F  +NL+ MY     +++AR +F       
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193

Query: 192 DGIELPD-------VVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 251
           D + + D       +V                       XXXXXXXXXXXXXXXXXXXXX
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDXXXXXXXXXXXXXXXXXXXXX 253

Query: 252 XXXXXXXXXXXXXSEKIVLDKYMAASMLSACTGLGALEQGMWIHRYIKKSEIKLDSKLAT 311
           XXXXXXXXXXXXX   I  +     S+L A + LG+LE G W+H Y + S I++D  L +
Sbjct: 254 XXXXXXXXXXXXXXGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313

Query: 312 TLIDMYCKCGCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTP 371
            LIDMY KCG +++A  VF +LP + + +W+ MI G A+HG+   AI+ F  M    V P
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 373

Query: 372 DNITFLNVLNACAHSGLVEKGRYYFNHFTQVYDIKPRTEHYGCMVDLYGRAGMLDEAMNL 431
            ++ ++N+L AC+H GLVE+GR YF+    V  ++PR EHYGCMVDL GR+G+LDEA   
Sbjct: 374 SDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF 433

Query: 432 IREMPMSPDAGVLGAFVGACKIHGNVDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRW 491
           I  MP+ PD  +  A +GAC++ GNV+MG+ +   ++++ P +SG YV L N+YA  G W
Sbjct: 434 ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNW 493

Query: 492 DGVAEVRKLMNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEANEIYGKVKEMVECIRCV 551
             V+E+R  M +++++K  G S+I+++GV+HEF+     HP+A EI   + E+ + +R  
Sbjct: 494 SEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLA 553

Query: 552 GY------VTEEEEEVEKDNPVYYHSEKLAVAYGLLKTRAGETLRITKNLRVCKDCHQAL 611
           GY      V    EE +K+N ++YHSEK+A A+GL+ T  G+ +RI KNLR+C+DCH ++
Sbjct: 554 GYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSI 613

Query: 612 KLVSKVFQRKIIVRDRNRFHHFADGECSCNDYW 619
           KL+SKV++RKI VRDR RFHHF DG CSC DYW
Sbjct: 614 KLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646

BLAST of Carg12933 vs. TAIR10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 451.4 bits (1160), Expect = 8.7e-127
Identity = 257/722 (35.60%), Postives = 371/722 (51.39%), Query Frame = 0

Query: 9   PSAS--PINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSK 68
           PS+S  P +S + H S +  L +C ++  L+  H+Q+I++GL   N A+ +L++FC +S 
Sbjct: 21  PSSSDPPYDSIRNHPS-LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSP 80

Query: 69  NGD-LDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKRVLPNKFTFPS 128
           + + L YA+ +FKTI  P+  I+NT+ RG+     P + L LY+ M+   +LPN +TFP 
Sbjct: 81  HFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPF 140

Query: 129 LIRACCIDNAIEEGKQIHAHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFD------ 188
           ++++C    A +EG+QIH HVLK G   D +   +LI MY     LE+A +VFD      
Sbjct: 141 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRX 200

Query: 189 ------------------------------------------------------------ 248
                                                                       
Sbjct: 201 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 260

Query: 249 ---------------------GIELPDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 308
                                 IEL   V                               
Sbjct: 261 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 320

Query: 309 XXXXXXXXXXXXXXXXXXXXXXXXXXS---EKIVLDKYM-----------AASMLSACTG 368
                                     +   E ++L + M             S+L AC  
Sbjct: 321 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 380

Query: 369 LGALEQGMWIHRYIKK--SEIKLDSKLATTLIDMYCKCGCLDRAFEVFTQLPEKGISSWN 428
           LGA++ G WIH YI K    +   S L T+LIDMY KCG ++ A +VF  +  K +SSWN
Sbjct: 381 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 440

Query: 429 CMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVLNACAHSGLVEKGRYYFNHFTQV 488
            MI G AMHG+ +A+ +LF  M    + PD+ITF+ +L+AC+HSG+++ GR+ F   TQ 
Sbjct: 441 AMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQD 500

Query: 489 YDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPDAGVLGAFVGACKIHGNVDMGEE 548
           Y + P+ EHYGCM+DL G +G+  EA  +I  M M PD  +  + + ACK+HGNV++GE 
Sbjct: 501 YKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGES 560

Query: 549 IGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKLMNDREVKKAAGFSMIELEGVVH 608
             + +I+++P N G YVLL N+YA AGRW+ VA+ R L+ND+ +KK  G S IE++ VVH
Sbjct: 561 FAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVH 620

Query: 609 EFIAGGRGHPEANEIYGKVKEMVECIRCVGY------VTEEEEEVEKDNPVYYHSEKLAV 619
           EFI G + HP   EIYG ++EM   +   G+      V +E EE  K+  + +HSEKLA+
Sbjct: 621 EFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 680

BLAST of Carg12933 vs. TAIR10
Match: AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 434.1 bits (1115), Expect = 1.4e-121
Identity = 282/604 (46.69%), Postives = 399/604 (66.06%), Query Frame = 0

Query: 27  LKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSKNGD-----LDYALLLFKTIP 86
           L+SCSS S+LK  H  ++R  L +D     RL+  C      +     L YA  +F  I 
Sbjct: 19  LQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQ 78

Query: 87  NPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKRVLPNKFTFPSLIRACCIDNAIEEGKQ 146
           NP+ +++N LIR +     P      Y +ML  R+ P+  TFP LI+A      +  G+Q
Sbjct: 79  NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQ 138

Query: 147 IHAHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDVVXXXXXXXXXXXXXX 206
            H+ +++FGF+ D + +N+L+HMYAN   +  A R+F  +      XXXXXXXXXXXXXX
Sbjct: 139 THSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRXXXXXXXXXXXXXXXXX 198

Query: 207 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEKIVLDKYMAASMLSA 266
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +V ++ +  S++S+
Sbjct: 199 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVANETVMVSVISS 258

Query: 267 CTGLGALEQGMWIHRYIKKSEIKLDSKLATTLIDMYCKCGCLDRAFEVFTQLPEKGISSW 326
           C  LGALE G   + Y+ KS + ++  L T L+DM+ +CG +++A  VF  LPE    SW
Sbjct: 259 CAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSW 318

Query: 327 NCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVLNACAHSGLVEKGRYYFNHFTQ 386
           + +I G+A+HG    A+  F  M +    P ++TF  VL+AC+H GLVEKG   + +  +
Sbjct: 319 SSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKK 378

Query: 387 VYDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPDAGVLGAFVGACKIHGNVDMGE 446
            + I+PR EHYGC+VD+ GRAG L EA N I +M + P+A +LGA +GACKI+ N ++ E
Sbjct: 379 DHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAE 438

Query: 447 EIGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKLMNDREVKKAAGFSMIELEGVV 506
            +G  +I++ P +SG YVLL N+YA AG+WD +  +R +M ++ VKK  G+S+IE++G +
Sbjct: 439 RVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKI 498

Query: 507 HEFIAG-GRGHPEANEIYGKVKEMVECIRCVGYVTE------EEEEVEKDNPVYYHSEKL 566
           ++F  G  + HPE  +I  K +E++  IR +GY         + +E EK++ ++ HSEKL
Sbjct: 499 NKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKL 558

Query: 567 AVAYGLLKTRAGETLRITKNLRVCKDCHQALKLVSKVFQRKIIVRDRNRFHHFADGECSC 619
           A+AYG++KT+ G T+RI KNLRVC+DCH   KL+S+V+ R++IVRDRNRFHHF +G CSC
Sbjct: 559 AIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSC 618

BLAST of Carg12933 vs. TAIR10
Match: AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 424.9 bits (1091), Expect = 8.7e-119
Identity = 286/596 (47.99%), Postives = 383/596 (64.26%), Query Frame = 0

Query: 32  SMSELKQYHSQIIRLGLST-DNDAMGRLVKFCAVSKNGDLDYALLLFKTIPNPDAYIYNT 91
           S+ E+ Q H+ I+R  L       +  L    A + +G + ++L LF    +PD +++  
Sbjct: 41  SVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTA 100

Query: 92  LIRGYLQLQFPRACLLLYLEMLHKRVLPNKFTFPSLIRACCIDNAIEEGKQIHAHVLKFG 151
            I             LLY+++L   + PN+FTF SL+++C    + + GK IH HVLKFG
Sbjct: 101 AINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC----STKSGKLIHTHVLKFG 160

Query: 152 FRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDVVXXXXXXXXXXXXXXXXXXXXXXX 211
              D +    L+ +YA    +  A++VFD +    +V XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 161 LGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSXXXXXXXXXXXXXXXXXXXXXX 220

Query: 212 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSE-KIVLDKYMAASMLSACTGLGALE 271
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +E K   D+    + LSAC+ +GALE
Sbjct: 221 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAEGKPKPDEITVVAALSACSQIGALE 280

Query: 272 QGMWIHRYIKKSEIKLDSKLATTLIDMYCKCGCLDRAFEVFTQLPEKGISSWNCMIGGMA 331
            G WIH ++K S I+L+ K+ T LIDMY KCG L+ A  VF   P K I +WN MI G A
Sbjct: 281 TGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYA 340

Query: 332 MHGKGEAAIELFKDME-TKMVTPDNITFLNVLNACAHSGLVEKGRYYFNHFTQVYDIKPR 391
           MHG  + A+ LF +M+    + P +ITF+  L ACAH+GLV +G   F    Q Y IKP+
Sbjct: 341 MHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPK 400

Query: 392 TEHYGCMVDLYGRAGMLDEAMNLIREMPMSPDAGVLGAFVGACKIHGNVDMGEEIGKRVI 451
            EHYGC+V L GRAG L  A   I+ M M  D+ +  + +G+CK+HG+  +G+EI + +I
Sbjct: 401 IEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLI 460

Query: 452 ELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKLMNDREVKKAAGFSMIELEGVVHEFIAGG 511
            L+  NSG YVLL N+YA  G ++GVA+VR LM ++ + K  G S IE+E  VHEF AG 
Sbjct: 461 GLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGD 520

Query: 512 RGHPEANEIYGKVKEMVECIRCVGY------VTEEEEEVEKDNPVYYHSEKLAVAYGLLK 571
           R H ++ EIY  ++++ E I+  GY      V ++ EE EK+  +  HSE+LA+AYGL+ 
Sbjct: 521 REHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLIS 580

Query: 572 TRAGETLRITKNLRVCKDCHQALKLVSKVFQRKIIVRDRNRFHHFADGECSCNDYW 619
           T+ G  L+I KNLRVC DCH   KL+SK+  RKI++RDRNRFHHF DG CSC D+W
Sbjct: 581 TKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632

BLAST of Carg12933 vs. Swiss-Prot
Match: sp|Q9FJY7|PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 2.6e-136
Identity = 305/600 (50.83%), Postives = 402/600 (67.00%), Query Frame = 0

Query: 27  LKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSKNGD-LDYALLLFKTIPNPDA 86
           L+ CS   ELKQ H+++++ GL  D+ A+ + + FC  S + D L YA ++F     PD 
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80

Query: 87  YIYNTLIRGYLQLQFPRACLLLYLEMLHKRVLPNKFTFPSLIRACCIDNAIEEGKQIHAH 146
           +++N +IRG+     P   LLLY  ML      N +TFPSL++AC   +A EE  QIHA 
Sbjct: 81  FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140

Query: 147 VLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDVVXXXXXXXXXXXXXXXXXX 206
           + K G+  D ++ N+LI+ YA   + + A  +FD I  P   XXXXXXXXXXXXXXXXXX
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPXXXXXXXXXXXXXXXXXXXXX 200

Query: 207 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEKIVLDKYMAASMLSACTGL 266
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +  D    A+ LSAC  L
Sbjct: 201 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPDNVSLANALSACAQL 260

Query: 267 GALEQGMWIHRYIKKSEIKLDSKLATTLIDMYCKCGCLDRAFEVFTQLPEKGISSWNCMI 326
           GALEQG WIH Y+ K+ I++DS L   LIDMY KCG ++ A EVF  + +K + +W  +I
Sbjct: 261 GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALI 320

Query: 327 GGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVLNACAHSGLVEKGRYYFNHFTQVYDI 386
            G A HG G  AI  F +M+   + P+ ITF  VL AC+++GLVE+G+  F    + Y++
Sbjct: 321 SGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNL 380

Query: 387 KPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPDAGVLGAFVGACKIHGNVDMGEEIGK 446
           KP  EHYGC+VDL GRAG+LDEA   I+EMP+ P+A + GA + AC+IH N+++GEEIG+
Sbjct: 381 KPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGE 440

Query: 447 RVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKLMNDREVKKAAGFSMIELEGVVHEFI 506
            +I +DP + GRYV   N++A   +WD  AE R+LM ++ V K  G S I LEG  HEF+
Sbjct: 441 ILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFL 500

Query: 507 AGGRGHPEANEIYGKVKEMVECIRCVGYVTEEEE-------EVEKDNPVYYHSEKLAVAY 566
           AG R HPE  +I  K + M   +   GYV E EE       + E++  V+ HSEKLA+ Y
Sbjct: 501 AGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITY 560

Query: 567 GLLKTRAGETLRITKNLRVCKDCHQALKLVSKVFQRKIIVRDRNRFHHFADGECSCNDYW 619
           GL+KT+ G  +RI KNLRVCKDCH+  KL+SK+++R I++RDR RFHHF DG+CSC DYW
Sbjct: 561 GLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620

BLAST of Carg12933 vs. Swiss-Prot
Match: sp|Q9FI80|PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 5.2e-129
Identity = 273/633 (43.13%), Postives = 392/633 (61.93%), Query Frame = 0

Query: 12  SPINSPKVHTSPIH-GLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVS--KNG 71
           SP +SP  H S +   + +C ++ +L Q H+  I+ G   D  A   +++FCA S   + 
Sbjct: 14  SPASSPASHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR 73

Query: 72  DLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACL---LLYLEMLHKRVLPNKFTFPS 131
           DLDYA  +F  +P  + + +NT+IRG+ +    +A +   L Y  M  + V PN+FTFPS
Sbjct: 74  DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133

Query: 132 LIRACCIDNAIEEGKQIHAHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVF------- 191
           +++AC     I+EGKQIH   LK+GF  D F  +NL+ MY     +++AR +F       
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193

Query: 192 DGIELPD-------VVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 251
           D + + D       +V                       XXXXXXXXXXXXXXXXXXXXX
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDXXXXXXXXXXXXXXXXXXXXX 253

Query: 252 XXXXXXXXXXXXXSEKIVLDKYMAASMLSACTGLGALEQGMWIHRYIKKSEIKLDSKLAT 311
           XXXXXXXXXXXXX   I  +     S+L A + LG+LE G W+H Y + S I++D  L +
Sbjct: 254 XXXXXXXXXXXXXXGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313

Query: 312 TLIDMYCKCGCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTP 371
            LIDMY KCG +++A  VF +LP + + +W+ MI G A+HG+   AI+ F  M    V P
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 373

Query: 372 DNITFLNVLNACAHSGLVEKGRYYFNHFTQVYDIKPRTEHYGCMVDLYGRAGMLDEAMNL 431
            ++ ++N+L AC+H GLVE+GR YF+    V  ++PR EHYGCMVDL GR+G+LDEA   
Sbjct: 374 SDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF 433

Query: 432 IREMPMSPDAGVLGAFVGACKIHGNVDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRW 491
           I  MP+ PD  +  A +GAC++ GNV+MG+ +   ++++ P +SG YV L N+YA  G W
Sbjct: 434 ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNW 493

Query: 492 DGVAEVRKLMNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEANEIYGKVKEMVECIRCV 551
             V+E+R  M +++++K  G S+I+++GV+HEF+     HP+A EI   + E+ + +R  
Sbjct: 494 SEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLA 553

Query: 552 GY------VTEEEEEVEKDNPVYYHSEKLAVAYGLLKTRAGETLRITKNLRVCKDCHQAL 611
           GY      V    EE +K+N ++YHSEK+A A+GL+ T  G+ +RI KNLR+C+DCH ++
Sbjct: 554 GYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSI 613

Query: 612 KLVSKVFQRKIIVRDRNRFHHFADGECSCNDYW 619
           KL+SKV++RKI VRDR RFHHF DG CSC DYW
Sbjct: 614 KLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646

BLAST of Carg12933 vs. Swiss-Prot
Match: sp|Q9LN01|PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 1.6e-125
Identity = 257/722 (35.60%), Postives = 371/722 (51.39%), Query Frame = 0

Query: 9   PSAS--PINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSK 68
           PS+S  P +S + H S +  L +C ++  L+  H+Q+I++GL   N A+ +L++FC +S 
Sbjct: 21  PSSSDPPYDSIRNHPS-LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSP 80

Query: 69  NGD-LDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKRVLPNKFTFPS 128
           + + L YA+ +FKTI  P+  I+NT+ RG+     P + L LY+ M+   +LPN +TFP 
Sbjct: 81  HFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPF 140

Query: 129 LIRACCIDNAIEEGKQIHAHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFD------ 188
           ++++C    A +EG+QIH HVLK G   D +   +LI MY     LE+A +VFD      
Sbjct: 141 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRX 200

Query: 189 ------------------------------------------------------------ 248
                                                                       
Sbjct: 201 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 260

Query: 249 ---------------------GIELPDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 308
                                 IEL   V                               
Sbjct: 261 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 320

Query: 309 XXXXXXXXXXXXXXXXXXXXXXXXXXS---EKIVLDKYM-----------AASMLSACTG 368
                                     +   E ++L + M             S+L AC  
Sbjct: 321 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 380

Query: 369 LGALEQGMWIHRYIKK--SEIKLDSKLATTLIDMYCKCGCLDRAFEVFTQLPEKGISSWN 428
           LGA++ G WIH YI K    +   S L T+LIDMY KCG ++ A +VF  +  K +SSWN
Sbjct: 381 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 440

Query: 429 CMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVLNACAHSGLVEKGRYYFNHFTQV 488
            MI G AMHG+ +A+ +LF  M    + PD+ITF+ +L+AC+HSG+++ GR+ F   TQ 
Sbjct: 441 AMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQD 500

Query: 489 YDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPDAGVLGAFVGACKIHGNVDMGEE 548
           Y + P+ EHYGCM+DL G +G+  EA  +I  M M PD  +  + + ACK+HGNV++GE 
Sbjct: 501 YKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGES 560

Query: 549 IGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKLMNDREVKKAAGFSMIELEGVVH 608
             + +I+++P N G YVLL N+YA AGRW+ VA+ R L+ND+ +KK  G S IE++ VVH
Sbjct: 561 FAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVH 620

Query: 609 EFIAGGRGHPEANEIYGKVKEMVECIRCVGY------VTEEEEEVEKDNPVYYHSEKLAV 619
           EFI G + HP   EIYG ++EM   +   G+      V +E EE  K+  + +HSEKLA+
Sbjct: 621 EFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 680

BLAST of Carg12933 vs. Swiss-Prot
Match: sp|Q9FG16|PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 2.6e-120
Identity = 282/604 (46.69%), Postives = 399/604 (66.06%), Query Frame = 0

Query: 27  LKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSKNGD-----LDYALLLFKTIP 86
           L+SCSS S+LK  H  ++R  L +D     RL+  C      +     L YA  +F  I 
Sbjct: 19  LQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQ 78

Query: 87  NPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKRVLPNKFTFPSLIRACCIDNAIEEGKQ 146
           NP+ +++N LIR +     P      Y +ML  R+ P+  TFP LI+A      +  G+Q
Sbjct: 79  NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQ 138

Query: 147 IHAHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDVVXXXXXXXXXXXXXX 206
            H+ +++FGF+ D + +N+L+HMYAN   +  A R+F  +      XXXXXXXXXXXXXX
Sbjct: 139 THSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRXXXXXXXXXXXXXXXXX 198

Query: 207 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEKIVLDKYMAASMLSA 266
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +V ++ +  S++S+
Sbjct: 199 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVANETVMVSVISS 258

Query: 267 CTGLGALEQGMWIHRYIKKSEIKLDSKLATTLIDMYCKCGCLDRAFEVFTQLPEKGISSW 326
           C  LGALE G   + Y+ KS + ++  L T L+DM+ +CG +++A  VF  LPE    SW
Sbjct: 259 CAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSW 318

Query: 327 NCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVLNACAHSGLVEKGRYYFNHFTQ 386
           + +I G+A+HG    A+  F  M +    P ++TF  VL+AC+H GLVEKG   + +  +
Sbjct: 319 SSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKK 378

Query: 387 VYDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPDAGVLGAFVGACKIHGNVDMGE 446
            + I+PR EHYGC+VD+ GRAG L EA N I +M + P+A +LGA +GACKI+ N ++ E
Sbjct: 379 DHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAE 438

Query: 447 EIGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKLMNDREVKKAAGFSMIELEGVV 506
            +G  +I++ P +SG YVLL N+YA AG+WD +  +R +M ++ VKK  G+S+IE++G +
Sbjct: 439 RVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKI 498

Query: 507 HEFIAG-GRGHPEANEIYGKVKEMVECIRCVGYVTE------EEEEVEKDNPVYYHSEKL 566
           ++F  G  + HPE  +I  K +E++  IR +GY         + +E EK++ ++ HSEKL
Sbjct: 499 NKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKL 558

Query: 567 AVAYGLLKTRAGETLRITKNLRVCKDCHQALKLVSKVFQRKIIVRDRNRFHHFADGECSC 619
           A+AYG++KT+ G T+RI KNLRVC+DCH   KL+S+V+ R++IVRDRNRFHHF +G CSC
Sbjct: 559 AIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSC 618

BLAST of Carg12933 vs. Swiss-Prot
Match: sp|Q9SZT8|PP354_ARATH (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 1.6e-117
Identity = 286/596 (47.99%), Postives = 383/596 (64.26%), Query Frame = 0

Query: 32  SMSELKQYHSQIIRLGLST-DNDAMGRLVKFCAVSKNGDLDYALLLFKTIPNPDAYIYNT 91
           S+ E+ Q H+ I+R  L       +  L    A + +G + ++L LF    +PD +++  
Sbjct: 41  SVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTA 100

Query: 92  LIRGYLQLQFPRACLLLYLEMLHKRVLPNKFTFPSLIRACCIDNAIEEGKQIHAHVLKFG 151
            I             LLY+++L   + PN+FTF SL+++C    + + GK IH HVLKFG
Sbjct: 101 AINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC----STKSGKLIHTHVLKFG 160

Query: 152 FRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDVVXXXXXXXXXXXXXXXXXXXXXXX 211
              D +    L+ +YA    +  A++VFD +    +V XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 161 LGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSXXXXXXXXXXXXXXXXXXXXXX 220

Query: 212 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSE-KIVLDKYMAASMLSACTGLGALE 271
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +E K   D+    + LSAC+ +GALE
Sbjct: 221 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAEGKPKPDEITVVAALSACSQIGALE 280

Query: 272 QGMWIHRYIKKSEIKLDSKLATTLIDMYCKCGCLDRAFEVFTQLPEKGISSWNCMIGGMA 331
            G WIH ++K S I+L+ K+ T LIDMY KCG L+ A  VF   P K I +WN MI G A
Sbjct: 281 TGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYA 340

Query: 332 MHGKGEAAIELFKDME-TKMVTPDNITFLNVLNACAHSGLVEKGRYYFNHFTQVYDIKPR 391
           MHG  + A+ LF +M+    + P +ITF+  L ACAH+GLV +G   F    Q Y IKP+
Sbjct: 341 MHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPK 400

Query: 392 TEHYGCMVDLYGRAGMLDEAMNLIREMPMSPDAGVLGAFVGACKIHGNVDMGEEIGKRVI 451
            EHYGC+V L GRAG L  A   I+ M M  D+ +  + +G+CK+HG+  +G+EI + +I
Sbjct: 401 IEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLI 460

Query: 452 ELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKLMNDREVKKAAGFSMIELEGVVHEFIAGG 511
            L+  NSG YVLL N+YA  G ++GVA+VR LM ++ + K  G S IE+E  VHEF AG 
Sbjct: 461 GLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGD 520

Query: 512 RGHPEANEIYGKVKEMVECIRCVGY------VTEEEEEVEKDNPVYYHSEKLAVAYGLLK 571
           R H ++ EIY  ++++ E I+  GY      V ++ EE EK+  +  HSE+LA+AYGL+ 
Sbjct: 521 REHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLIS 580

Query: 572 TRAGETLRITKNLRVCKDCHQALKLVSKVFQRKIIVRDRNRFHHFADGECSCNDYW 619
           T+ G  L+I KNLRVC DCH   KL+SK+  RKI++RDRNRFHHF DG CSC D+W
Sbjct: 581 TKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632

BLAST of Carg12933 vs. TrEMBL
Match: tr|A0A0A0LWF1|A0A0A0LWF1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569490 PE=4 SV=1)

HSP 1 Score: 844.0 bits (2179), Expect = 2.2e-241
Identity = 470/577 (81.46%), Postives = 514/577 (89.08%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPI-HGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLV 60
           M+SLL L P  S  NS K + SPI H L SCSSMSELKQ+HSQIIRLGLSTDN+A+GRL+
Sbjct: 1   MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI 60

Query: 61  KFCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKRVLPN 120
           KFCAVSK GDL YALLLF +IP PDA+IYNTLIR YL    P++ LLLYL+MLH  V PN
Sbjct: 61  KFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPN 120

Query: 121 KFTFPSLIRACCIDNAIEEGKQIHAHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFD 180
           KFTFPS+IRACCIDN++EEGKQIH HV+KFGF  DRF QNNLIHMYANFQSLE+ARRVFD
Sbjct: 121 KFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFD 180

Query: 181 GIELPDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            IELPDVV    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 CIELPDVVAWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXSEKIVLDKYMAASMLSACTGLGALEQGMWIHRYIKKSEIKLDSKLATTLIDMYCK 300
           XX    EK+VL+KY+AASMLSACTGLGALEQG WIHRYI+++ I+ DSKLATTLIDMYCK
Sbjct: 241 XXRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCK 300

Query: 301 CGCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNV 360
           CGCLD A+EVF  LPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMV PDNITFLNV
Sbjct: 301 CGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNV 360

Query: 361 LNACAHSGLVEKGRYYFNHFTQVYDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSP 420
           L+ACAHSGLVEKG++YF  FTQVY I+PRTEHYGCMVDLYGRAG+L+EAM +I EMPMSP
Sbjct: 361 LSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSP 420

Query: 421 DAGVLGAFVGACKIHGNVDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRK 480
           D GVLGAFVGACKIHGN+++GEE+GKRVIEL+P+NSGRYVLLGNLYAEAGRW+GVAEVRK
Sbjct: 421 DVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRK 480

Query: 481 LMNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEANEIYGKVKEMVECIRCVGYVTEEEE 540
           LMNDREVKKAAG SMIELEGVV+EFIAGGR HPEA EIY K+ EM+ECIR  GYV E E 
Sbjct: 481 LMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAENEI 540

Query: 541 EVEKDNPVYYHSEKLAVAYGLLKTRAGETLRITKNLR 577
           E EKDNPVYYHSEKLA+A+GLLKT+AGE LRITKNLR
Sbjct: 541 EEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLR 577

BLAST of Carg12933 vs. TrEMBL
Match: tr|F6H9I8|F6H9I8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_04s0069g00930 PE=4 SV=1)

HSP 1 Score: 825.5 bits (2131), Expect = 8.1e-236
Identity = 458/624 (73.40%), Postives = 531/624 (85.10%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
           MSSL  LQ S   ++S K H  P++GL SCS+M+ELKQYHSQIIRLGLS DNDAMGR++K
Sbjct: 1   MSSLQLLQASPPSLSSAKAHKLPLYGLDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIK 60

Query: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKRVLPNK 120
           FCA+SK+GDL+YAL +F  IP+PDAYIYNT+ RGYL+ Q  R C+ +Y  MLHK V PNK
Sbjct: 61  FCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNK 120

Query: 121 FTFPSLIRACCIDNAIEEGKQIHAHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
           FT+P LIRACCID AIEEGKQIHAHVLKFGF  D FS NNLIHMY NFQSLE+ARRVFD 
Sbjct: 121 FTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDN 180

Query: 181 IELPDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           +   DVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 MPQRDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXSEKIVLDKYMAASMLSACTGLGALEQGMWIHRYIKKSEIKLDSKLATTLIDMYCKC 300
           XXXX     LDK++AASMLSACTGLGALEQG WIH YI+KS I+LDSKLATT+IDMYCKC
Sbjct: 241 XXXXXXXXXLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKC 300

Query: 301 GCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVL 360
           GCL++A EVF +LP+KGISSWNCMIGG+AMHGKGEAAIELFK+ME +MV PD ITF+NVL
Sbjct: 301 GCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVL 360

Query: 361 NACAHSGLVEKGRYYFNHFTQVYDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPD 420
           +ACAHSGLVE+G++YF + T+V  +KP  EH+GCMVDL GRAG+L+EA  LI EMP++PD
Sbjct: 361 SACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPD 420

Query: 421 AGVLGAFVGACKIHGNVDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKL 480
           AGVLGA VGAC+IHGN ++GE+IGK+VIEL+P NSGRYVLL NLYA AGRW+ VA+VRKL
Sbjct: 421 AGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKL 480

Query: 481 MNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEANEIYGKVKEMVECIRCVGYVTEEE-- 540
           MNDR VKKA GFSMIE E  V EFIAGGR HP+A EIY K+ E++E IR +GYV + +  
Sbjct: 481 MNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGV 540

Query: 541 ----EEVEKDNPVYYHSEKLAVAYGLLKTRAGETLRITKNLRVCKDCHQALKLVSKVFQR 600
               +E EK+NP+YYHSEKLA+A+GLLKT+ GETLRI+KNLR+C+DCHQA KL+SKV+ R
Sbjct: 541 LHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDR 600

Query: 601 KIIVRDRNRFHHFADGECSCNDYW 619
           +II+RDRNRFHHF  G CSC DYW
Sbjct: 601 EIIIRDRNRFHHFRMGGCSCKDYW 624

BLAST of Carg12933 vs. TrEMBL
Match: tr|M5Y189|M5Y189_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G105500 PE=4 SV=1)

HSP 1 Score: 816.6 bits (2108), Expect = 3.8e-233
Identity = 451/624 (72.28%), Postives = 524/624 (83.97%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
           M+SL  LQ +   ++SPK   SP+ G++SCS+M+EL+Q HS++IRLGL+ DNDAMGR++K
Sbjct: 1   MTSLQVLQATPPHLSSPKTQISPLRGIESCSTMAELRQLHSKVIRLGLAADNDAMGRVIK 60

Query: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKRVLPNK 120
           FCA+SKNGDL YAL +F T+ +PDA+IYNT++RGYLQ   PR C++LY +ML   V PNK
Sbjct: 61  FCALSKNGDLGYALQVFDTMLHPDAFIYNTVMRGYLQCHLPRNCIVLYSQMLQDSVTPNK 120

Query: 121 FTFPSLIRACCIDNAIEEGKQIHAHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
           +TFPS+IRACC D+AI EGKQ+HAHV+K G+  D F QNNLIHMY  FQSLEEARRVFD 
Sbjct: 121 YTFPSVIRACCNDDAIGEGKQVHAHVVKLGYGADGFCQNNLIHMYVKFQSLEEARRVFDK 180

Query: 181 IELPDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           +   D V   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 MLRMDAVSWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXSEKIVLDKYMAASMLSACTGLGALEQGMWIHRYIKKSEIKLDSKLATTLIDMYCKC 300
           XXXX EK+ LDK+MAASMLSACTGLGALEQG WIH YI+KS I+LDSKLATT+IDMYCKC
Sbjct: 241 XXXXVEKVELDKFMAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTIIDMYCKC 300

Query: 301 GCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVL 360
           GCL++AFEVF  LP KGISSWNCMIGG+AMHGKGEAAIELF+ M+  MV PDNITF+NVL
Sbjct: 301 GCLEKAFEVFNGLPHKGISSWNCMIGGLAMHGKGEAAIELFEKMQRDMVAPDNITFVNVL 360

Query: 361 NACAHSGLVEKGRYYFNHFTQVYDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPD 420
           +ACAHSGLVE+G+ YF    +V+ I+PR EH+GCMVDL GRAGML+EA  LI EMPMSPD
Sbjct: 361 SACAHSGLVEEGQRYFQSMVEVHGIEPRKEHFGCMVDLLGRAGMLEEARKLISEMPMSPD 420

Query: 421 AGVLGAFVGACKIHGNVDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKL 480
            GVLGA +GACKIHGNV++GE IG+ VIEL+P NSGRYVLL NLYA AGRW+ VA VR+L
Sbjct: 421 VGVLGALLGACKIHGNVELGEHIGRIVIELEPENSGRYVLLANLYANAGRWEDVANVRRL 480

Query: 481 MNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEANEIYGKVKEMVECIRCVGYVTEEE-- 540
           MNDR VKK  GFSMIELEGVV+EFIAGG  HP+  EIY KV EM++CIR  GYV + E  
Sbjct: 481 MNDRGVKKVPGFSMIELEGVVNEFIAGGGAHPQTKEIYAKVDEMLKCIRSAGYVPDTEGV 540

Query: 541 ----EEVEKDNPVYYHSEKLAVAYGLLKTRAGETLRITKNLRVCKDCHQALKLVSKVFQR 600
               +E EK+NP+YYHSEKLA+A+GLLKT+ GETLRI+KNLRVCKDCHQA KL+SKVF R
Sbjct: 541 LHDLDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRVCKDCHQASKLISKVFDR 600

Query: 601 KIIVRDRNRFHHFADGECSCNDYW 619
           +IIVRDRNRFHHF  G+CSC DYW
Sbjct: 601 EIIVRDRNRFHHFKRGDCSCKDYW 624

BLAST of Carg12933 vs. TrEMBL
Match: tr|A0A200R1T0|A0A200R1T0_9MAGN (Pentatricopeptide repeat OS=Macleaya cordata OX=56857 GN=BVC80_1543g89 PE=4 SV=1)

HSP 1 Score: 815.8 bits (2106), Expect = 6.4e-233
Identity = 450/624 (72.12%), Postives = 524/624 (83.97%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
           M+S + L  S    +SPK H S  HGL+SCS+M+ELKQ+HS+IIRLGLS DNDAMGR++K
Sbjct: 1   MASPVLLPASPPSPSSPKTHLSSSHGLESCSTMAELKQFHSKIIRLGLSKDNDAMGRVIK 60

Query: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKRVLPNK 120
           FCA+SK+GDL+YAL +F  IP+PD +IYNT+IRGY Q Q  + C+LLY +ML + V PNK
Sbjct: 61  FCAISKSGDLNYALKVFDEIPHPDTFIYNTIIRGYCQAQLTKNCILLYSQMLQESVFPNK 120

Query: 121 FTFPSLIRACCIDNAIEEGKQIHAHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
           FTFP ++RACCI NAIEE KQIHAH+LKF F  D+F QNNLIHMY NFQ L+EARRVFD 
Sbjct: 121 FTFPCVVRACCIGNAIEEAKQIHAHILKFAFEGDKFCQNNLIHMYVNFQYLDEARRVFDK 180

Query: 181 IELPDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           +   D V   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 MPQRDFVSWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXSEKIVLDKYMAASMLSACTGLGALEQGMWIHRYIKKSEIKLDSKLATTLIDMYCKC 300
           XXXX EK+ LDK++AASMLSACTGLGALEQG WIH YIKKS I+LDSKLATT+IDMYCKC
Sbjct: 241 XXXXXEKVELDKFVAASMLSACTGLGALEQGEWIHGYIKKSGIELDSKLATTIIDMYCKC 300

Query: 301 GCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVL 360
           GCLD+AFEVF  L  KGISSWNCMIGG+AMHGKGEAAIELF++M+ +MV PD ITF+N+L
Sbjct: 301 GCLDKAFEVFNGLTHKGISSWNCMIGGIAMHGKGEAAIELFEEMQKEMVAPDGITFVNLL 360

Query: 361 NACAHSGLVEKGRYYFNHFTQVYDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPD 420
           +ACAH+GL+E+GR YF+   +VY I+P+ EHYGCMVDL GRAG L++A  LI EM MSPD
Sbjct: 361 SACAHTGLIEEGRRYFHLMKEVYGIEPKMEHYGCMVDLLGRAGFLEDARKLIDEMHMSPD 420

Query: 421 AGVLGAFVGACKIHGNVDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKL 480
           AGVLGA +GACKIHG +++GE+IGKRVIEL+P NSGRYVLL NLYA  GRWD VA++RKL
Sbjct: 421 AGVLGALLGACKIHGEIELGEQIGKRVIELEPHNSGRYVLLANLYANVGRWDDVAKMRKL 480

Query: 481 MNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEANEIYGKVKEMVECIRCVGYVTEEE-- 540
           MNDR VKK  GFSMIELEGVV EFIAGGR HP+A EIY KV EM+E IR +GYV E +  
Sbjct: 481 MNDRGVKKLPGFSMIELEGVVSEFIAGGRTHPQAKEIYAKVDEMLERIRSIGYVPETDGV 540

Query: 541 ----EEVEKDNPVYYHSEKLAVAYGLLKTRAGETLRITKNLRVCKDCHQALKLVSKVFQR 600
               +E EK+NP+YYHSEKLA+A+GLLKT+ G T+RI+KNLRVCKDCHQA K +SKVF R
Sbjct: 541 LHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGSTIRISKNLRVCKDCHQASKFISKVFDR 600

Query: 601 KIIVRDRNRFHHFADGECSCNDYW 619
           +I+VRDRNRFHHF+ GECSC DYW
Sbjct: 601 EIVVRDRNRFHHFSKGECSCKDYW 624

BLAST of Carg12933 vs. TrEMBL
Match: tr|A0A2I4DGD3|A0A2I4DGD3_9ROSI (pentatricopeptide repeat-containing protein At5g66520-like OS=Juglans regia OX=51240 GN=LOC108979894 PE=4 SV=1)

HSP 1 Score: 805.8 bits (2080), Expect = 6.6e-230
Identity = 452/625 (72.32%), Postives = 523/625 (83.68%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
           M SL  LQ +   I+SP  H SP+ GL SCSSMS+LKQYHSQ+IRLGLS DNDAMGR+V+
Sbjct: 1   MISLQLLQAAPQHISSPSSHLSPLLGLVSCSSMSQLKQYHSQLIRLGLSADNDAMGRVVR 60

Query: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKRVLPNK 120
           FCA+SKNGDL YAL +F TIP PD +IYNT++RGYLQ Q PR C+LLY +MLH+ V PN 
Sbjct: 61  FCAISKNGDLRYALQVFDTIPQPDTFIYNTIMRGYLQCQLPRNCVLLYSQMLHESVTPNG 120

Query: 121 FTFPSLIRACCIDNAIEEGKQIHAHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
           FT P++IRAC  DNAIEEGKQ+HAHV+KFGF  D +SQNNLI+MY  FQSLE+AR VFD 
Sbjct: 121 FTLPTVIRACSDDNAIEEGKQVHAHVVKFGFEADVYSQNNLIYMYVTFQSLEKARMVFDK 180

Query: 181 IELPDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           + + +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 MLVRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXSEKIVLDKYMAASMLSACTGLGALEQGMWIHRYIKKSEIKLDSKLATTLIDMYCKC 300
           XXX +EK+VLDK++AASMLSACTGLGALEQG WIH YI KS I+LDSKLA T+IDMYCKC
Sbjct: 241 XXXRAEKVVLDKFVAASMLSACTGLGALEQGKWIHGYIDKSGIELDSKLAATIIDMYCKC 300

Query: 301 GCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNVL 360
           GCL  AFEVF  LP KGISSWNCMIGG+A++GKGE+AI+LFK+ME +MV PDNITF+++L
Sbjct: 301 GCLGTAFEVFNGLPHKGISSWNCMIGGLAINGKGESAIQLFKEMERQMVAPDNITFVHLL 360

Query: 361 NACAHSGLVEKGRYYFNHFTQVYDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSPD 420
           +ACAHSGLVE+GR+YF+H  +V+ I+P+ EH+GCMVD+ GRAGML+EA  LI +MPMSPD
Sbjct: 361 SACAHSGLVEEGRHYFHHMVEVHGIEPKREHFGCMVDILGRAGMLEEARKLINDMPMSPD 420

Query: 421 AGVLGAFVGACKIHGNVDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRKL 480
           A VLGA  GACKIHGNV +GEE+GKRVIEL+ +NSGRYVLL NLYA AGRW+ VA VRKL
Sbjct: 421 ASVLGALFGACKIHGNVKLGEEVGKRVIELESNNSGRYVLLANLYANAGRWEDVANVRKL 480

Query: 481 MNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEANEIYGKVKEMVECIRCVGYVTEEE-- 540
           MNDR VKK  G SMIELEGV++EFIAG   HP+A EIY KV EM+E IR V YV   +  
Sbjct: 481 MNDRGVKKVPGVSMIELEGVLNEFIAGESAHPQAAEIYAKVDEMLERIRFVSYVPNTDGV 540

Query: 541 -----EEVEKDNPVYYHSEKLAVAYGLLKTRAGETLRITKNLRVCKDCHQALKLVSKVFQ 600
                EE EK+ P+YYHSEKLA+A+GLLKT+ GETLRITKNLRVCKDCH   KL+SKV+ 
Sbjct: 541 SCFDIEEEEKEKPLYYHSEKLAIAFGLLKTKPGETLRITKNLRVCKDCHNVTKLISKVYD 600

Query: 601 RKIIVRDRNRFHHFADGECSCNDYW 619
           R+IIVRDRNRFHHF  GECSC DYW
Sbjct: 601 RQIIVRDRNRFHHFRMGECSCKDYW 625

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022960820.10.0e+0099.51pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita moschata][more]
XP_023515687.10.0e+0096.94pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita pepo subsp... [more]
XP_022987211.11.9e-30594.35pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima] >X... [more]
XP_022138850.19.0e-27186.86uncharacterized protein LOC111009921 isoform X1 [Momordica charantia][more]
XP_022138851.19.0e-27186.86uncharacterized protein LOC111009921 isoform X2 [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT5G66520.11.4e-13750.83Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G48910.12.9e-13043.13Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G08070.18.7e-12735.60Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G06540.11.4e-12146.69Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G37380.18.7e-11947.99Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q9FJY7|PP449_ARATH2.6e-13650.83Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
sp|Q9FI80|PP425_ARATH5.2e-12943.13Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... [more]
sp|Q9LN01|PPR21_ARATH1.6e-12535.60Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
sp|Q9FG16|PP367_ARATH2.6e-12046.69Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... [more]
sp|Q9SZT8|PP354_ARATH1.6e-11747.99Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LWF1|A0A0A0LWF1_CUCSA2.2e-24181.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569490 PE=4 SV=1[more]
tr|F6H9I8|F6H9I8_VITVI8.1e-23673.40Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_04s0069g00930 PE=4 SV=... [more]
tr|M5Y189|M5Y189_PRUPE3.8e-23372.28Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G105500 PE=4 SV=1[more]
tr|A0A200R1T0|A0A200R1T0_9MAGN6.4e-23372.12Pentatricopeptide repeat OS=Macleaya cordata OX=56857 GN=BVC80_1543g89 PE=4 SV=1[more]
tr|A0A2I4DGD3|A0A2I4DGD3_9ROSI6.6e-23072.32pentatricopeptide repeat-containing protein At5g66520-like OS=Juglans regia OX=5... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR032867DYW_dom
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12933-RACarg12933-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 291..319
e-value: 7.3E-5
score: 20.7
coord: 187..215
e-value: 5.1E-5
score: 21.2
coord: 392..415
e-value: 5.3E-4
score: 18.0
coord: 219..251
e-value: 2.2E-9
score: 34.9
coord: 86..119
e-value: 1.8E-4
score: 19.5
coord: 320..350
e-value: 2.2E-5
score: 22.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 83..131
e-value: 2.3E-9
score: 37.2
coord: 217..262
e-value: 5.1E-8
score: 32.9
coord: 317..364
e-value: 1.7E-10
score: 40.8
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 184..212
e-value: 3.6E-7
score: 29.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 391..416
e-value: 5.7E-5
score: 23.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 321..351
score: 7.465
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 352..387
score: 6.577
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 16..50
score: 5.207
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 185..215
score: 10.633
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 454..488
score: 6.632
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 251..285
score: 6.95
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 119..153
score: 8.188
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 154..184
score: 6.226
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 286..320
score: 10.578
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 388..418
score: 8.528
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 84..118
score: 9.427
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 216..250
score: 11.104
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 491..607
e-value: 1.6E-30
score: 105.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 267..382
e-value: 3.2E-28
score: 101.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 383..596
e-value: 2.8E-12
score: 48.6
coord: 173..266
e-value: 2.6E-23
score: 84.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 25..172
e-value: 5.7E-20
score: 73.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 435..471
coord: 200..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 31..541
NoneNo IPR availablePANTHERPTHR24015:SF615SUBFAMILY NOT NAMEDcoord: 31..541