BLAST of Carg12922 vs. NCBI nr
Match:
XP_023515616.1 (pentatricopeptide repeat-containing protein At5g56310 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 933.7 bits (2412), Expect = 2.8e-268
Identity = 535/548 (97.63%), Postives = 538/548 (98.18%), Query Frame = 0
Query: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWS SRLCKSSSS VESTIF APFALTSLLSNCRD RHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1 MRWSLSRLCKSSSSFVESTIFTAPFALTSLLSNCRDSRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
RFI ACSSLGLYLYAFSVFSNK HPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP
Sbjct: 61 RFIDACSSLGLYLYAFSVFSNKTHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYS CGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSFCGCVSDARKLF 180
Query: 181 DLVDFKDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
DLVDFKDVA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 DLVDFKDVALWNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
Query: 241 XXXXXXXXKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
XXXXXXXXKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA
Sbjct: 241 XXXXXXXXKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQ+LFQDMPYE
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQELFQDMPYE 420
Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAASNTHRDA+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRS+SQLHGIYPVLCNIIVQLKMAGSYPEEW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSESQLHGIYPVLCNIIVQLKMAGSYPEEW 540
Query: 541 SKFLNYDE 549
SKFLNYDE
Sbjct: 541 SKFLNYDE 548
BLAST of Carg12922 vs. NCBI nr
Match:
XP_022987264.1 (pentatricopeptide repeat-containing protein At5g56310 [Cucurbita maxima])
HSP 1 Score: 927.2 bits (2395), Expect = 2.6e-266
Identity = 536/548 (97.81%), Postives = 539/548 (98.36%), Query Frame = 0
Query: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWS SRLCKSSSS VESTIF APFALTSLLSNCRD RHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1 MRWSLSRLCKSSSSFVESTIFTAPFALTSLLSNCRDSRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
RFI ACSSLGLYLYAFSVFSNK HPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP
Sbjct: 61 RFIDACSSLGLYLYAFSVFSNKTHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
DSYTIPFVLKAVVQLS VEVGRQIHTQTVSSGLDTDVNV TSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSVVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLF 180
Query: 181 DLVDFKDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
DLVD+KDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 DLVDYKDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
Query: 241 XXXXXXXXKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
XXXXXXXXKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA
Sbjct: 241 XXXXXXXXKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPFE 420
Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
KVMRNAGVKKAPGGSFIEINNRV+EFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEE
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEV 540
Query: 541 SKFLNYDE 549
SKFLNYDE
Sbjct: 541 SKFLNYDE 548
BLAST of Carg12922 vs. NCBI nr
Match:
XP_022960640.1 (pentatricopeptide repeat-containing protein At5g56310 [Cucurbita moschata])
HSP 1 Score: 920.2 bits (2377), Expect = 3.2e-264
Identity = 533/548 (97.26%), Postives = 536/548 (97.81%), Query Frame = 0
Query: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWS RLCKSSSS VES AP A+TSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1 MRWSLFRLCKSSSSFVES---FAPSAITSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
RFI ACSSLGLYLYA SVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP
Sbjct: 61 RFIDACSSLGLYLYALSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
DSYTIPFVLKA+VQLSAVEVGRQIHTQTVSSGLDTDVNV TSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAIVQLSAVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLF 180
Query: 181 DLVDFKDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
DLVDFKDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 DLVDFKDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
Query: 241 XXXXXXXXKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
XXXXXXXXKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA
Sbjct: 241 XXXXXXXXKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
KSGNIGRALEVFENMKHK+VITWSTMIAAMALHGLGGQA DMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKNVITWSTMIAAMALHGLGGQATDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
Query: 541 SKFLNYDE 549
SKFLNYDE
Sbjct: 541 SKFLNYDE 545
BLAST of Carg12922 vs. NCBI nr
Match:
XP_022147643.1 (pentatricopeptide repeat-containing protein At5g56310 [Momordica charantia] >XP_022147644.1 pentatricopeptide repeat-containing protein At5g56310 [Momordica charantia] >XP_022147645.1 pentatricopeptide repeat-containing protein At5g56310 [Momordica charantia])
HSP 1 Score: 790.8 bits (2041), Expect = 3.0e-225
Identity = 459/548 (83.76%), Postives = 503/548 (91.79%), Query Frame = 0
Query: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWS S LCKSS ++ TIF AP A SLLS+C DPRH+ QIHGFM+ RALDQDNL+LS
Sbjct: 1 MRWSLSILCKSSPFFIQRTIFTAPHAFNSLLSSCCDPRHVPQIHGFMVPRALDQDNLILS 60
Query: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
RFI ACSSL LY YA+SVFS+K +PDLRLYNT +KALSQTSSPI+AISL+SRI EGL+P
Sbjct: 61 RFIDACSSLRLYTYAYSVFSSKTNPDLRLYNTTIKALSQTSSPIHAISLFSRIRSEGLQP 120
Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
DSY+IPFVLKAVV++S ++VGRQIHTQTV S LDTDVNV TSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYSIPFVLKAVVKISTLQVGRQIHTQTVFSALDTDVNVVTSLIQMYSSCGCVSDARKLF 180
Query: 181 DLVDFKDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
D V ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 DFVPYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
Query: 241 XXXXXXXXKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
XXXXXXX +VEPDEIAMLAVLSACADLGALELGEWIHNYI KH LCRIVPLYNALIDMY+
Sbjct: 241 XXXXXXXQEVEPDEIAMLAVLSACADLGALELGEWIHNYIVKHGLCRIVPLYNALIDMYS 300
Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
KSGNI RALE+FENMK KSVITWSTMIAA+ALHG GG+AID+FLRMEKARVRPNE+TFIA
Sbjct: 301 KSGNIRRALEIFENMKQKSVITWSTMIAALALHGRGGEAIDIFLRMEKARVRPNEITFIA 360
Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
ILSACSHVGMVD+GRYYF+RMQS YKI+P+IEHYGCMIDLLARAG+LQEAQK+ +DMP+E
Sbjct: 361 ILSACSHVGMVDMGRYYFDRMQSTYKIKPQIEHYGCMIDLLARAGHLQEAQKVLKDMPFE 420
Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAASN HRDA+LAEQALRHLA+LEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNIHRDAELAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
KVMRNAGVKKAPGGSFIEINN+V+EFLAGD+SDSQLH I+ VLC IVQLKMAG +EW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNKVYEFLAGDKSDSQLHEIFHVLCKTIVQLKMAGLLQDEW 540
Query: 541 SKFLNYDE 549
SKFL++DE
Sbjct: 541 SKFLDFDE 548
BLAST of Carg12922 vs. NCBI nr
Match:
XP_008450993.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g56310 [Cucumis melo])
HSP 1 Score: 789.6 bits (2038), Expect = 6.6e-225
Identity = 462/548 (84.31%), Postives = 497/548 (90.69%), Query Frame = 0
Query: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
M WSFS L KSSSS +IF +P TSLLSNCR H+YQ+HGFMLHRALDQDNL LS
Sbjct: 1 MCWSFSLLSKSSSSFFRPSIFTSPLQFTSLLSNCRHHLHLYQVHGFMLHRALDQDNLFLS 60
Query: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
+FI AC+SLGL YAFS+FSNKAHPDLRLYNTA+KALS+TSSPI+AI LY+RI I+GLRP
Sbjct: 61 QFIDACTSLGLSSYAFSIFSNKAHPDLRLYNTAIKALSKTSSPIDAIWLYTRIQIDGLRP 120
Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
DSY+IPFVLKAVV+LSAVEVGRQIH QTVSS LD DVNVATSLIQMYSSCG VSDARK F
Sbjct: 121 DSYSIPFVLKAVVKLSAVEVGRQIHAQTVSSALDMDVNVATSLIQMYSSCGFVSDARKQF 180
Query: 181 DLVDFKDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
D V FK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 DFVGFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
Query: 241 XXXXXXXXKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
XXXXXXX +VEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 XXXXXXXEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
KSGNI RALEVFENMK KSVITWST+IAA+ALHGLG +AIDMFLRMEK +VRPNEVTF A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGREAIDMFLRMEKEKVRPNEVTFTA 360
Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
ILSACSHVGMVDVGRYYF++MQS+Y+I+P+IEHYGCMIDLLARAGYLQEA KL DMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYRIEPQIEHYGCMIDLLARAGYLQEAHKLLHDMPFE 420
Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANA IWGSLLAASNTH+DA LA+QAL+HLAKLEPENSGNY LLSNTYAALGRWNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHKDAGLAQQALKHLAKLEPENSGNYVLLSNTYAALGRWNESGTVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
K+MRNAGVKKAPGGS IEINNRV+EFLAGD+SDS +H +Y VLC II+QLKMAGSY EEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNRVYEFLAGDKSDSHVHEVYHVLCKIILQLKMAGSYQEEW 540
Query: 541 SKFLNYDE 549
KFLNYDE
Sbjct: 541 CKFLNYDE 548
BLAST of Carg12922 vs. TAIR10
Match:
AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 440.3 bits (1131), Expect = 1.8e-123
Identity = 261/510 (51.18%), Postives = 346/510 (67.84%), Query Frame = 0
Query: 27 LTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPD 86
+TSL + + + + Q H +M+ L++DNL +++FI ACS+ G YA+SVF+++ P+
Sbjct: 18 VTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPN 77
Query: 87 LRLYNTAVKALSQTSSP---INAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQ 146
L+NT ++ALS P AI++Y ++ +PD++T PFVLK V++S V GRQ
Sbjct: 78 TYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQ 137
Query: 147 IHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVA--XXXXXXXXXXXX 206
IH Q V G D+ V+V T LIQMY SCG + DARK+FD + KDV
Sbjct: 138 IHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGE 197
Query: 207 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEPDEIAMLAVL 266
XXXXXXXXXXXXXXXXXXXXX VEPDE+ +LAVL
Sbjct: 198 MDEARSLLEMMPCWVRNEVXXXXXXXXXXXXXXXXXXXXXFQRMLMENVEPDEVTLLAVL 257
Query: 267 SACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVI 326
SACADLG+LELGE I +Y++ + R V L NA+IDMYAKSGNI +AL+VFE + ++V+
Sbjct: 258 SACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVV 317
Query: 327 TWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRM 386
TW+T+IA +A HG G +A+ MF RM KA VRPN+VTFIAILSACSHVG VD+G+ FN M
Sbjct: 318 TWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSM 377
Query: 387 QSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADL 446
+S Y I P IEHYGCMIDLL RAG L+EA ++ + MP++ANAAIWGSLLAASN H D +L
Sbjct: 378 RSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLEL 437
Query: 447 AEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINN 506
E+AL L KLEP NSGNY LL+N Y+ LGRW+ES M+R +M+ GVKK G S IE+ N
Sbjct: 438 GERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVEN 497
Query: 507 RVHEFLAGDRSDSQLHGIYPVLCNIIVQLK 532
RV++F++GD + Q+ I+ +L + +Q++
Sbjct: 498 RVYKFISGDLTHPQVERIHEILQEMDLQIQ 527
BLAST of Carg12922 vs. TAIR10
Match:
AT2G20540.1 (mitochondrial editing factor 21)
HSP 1 Score: 325.9 bits (834), Expect = 4.9e-89
Identity = 225/472 (47.67%), Postives = 322/472 (68.22%), Query Frame = 0
Query: 42 QIHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTS 101
+I+ ++ L Q + ++++ + C + YA +F+ ++P++ LYN+ ++A + S
Sbjct: 28 KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87
Query: 102 SPINAISLYSRILIEGLR-PDSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVA 161
+ I +Y ++L + PD +T PF+ K+ L + +G+Q+H G V
Sbjct: 88 LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147
Query: 162 TSLIQMYSSCGCVSDARKLFDLVDFKDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 221
+LI MY + DA K+FD + +D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 207
Query: 222 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEPDEIAMLAVLSACADLGALELGEWIHNYI 281
XXXXXXXXXXXXXXXXXXXXXXX +EPDEI++++VL +CA LG+LELG+WIH Y
Sbjct: 208 XXXXXXXXXXXXXXXXXXXXXXXEMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267
Query: 282 EKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAI 341
E+ + + NALI+MY+K G I +A+++F M+ K VI+WSTMI+ A HG AI
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327
Query: 342 DMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDL 401
+ F M++A+V+PN +TF+ +LSACSHVGM G YF+ M+ Y+I+P+IEHYGC+ID+
Sbjct: 328 ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387
Query: 402 LARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNY 461
LARAG L+ A ++ + MP + ++ IWGSLL++ T + D+A A+ HL +LEPE+ GNY
Sbjct: 388 LARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNY 447
Query: 462 TLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHEFLAGDRS 513
LL+N YA LG+W + +RK++RN +KK PGGS IE+NN V EF++GD S
Sbjct: 448 VLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNS 499
BLAST of Carg12922 vs. TAIR10
Match:
AT5G59200.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 313.5 bits (802), Expect = 2.5e-85
Identity = 223/494 (45.14%), Postives = 326/494 (65.99%), Query Frame = 0
Query: 27 LTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPD 86
L S+L +C++ H+ IH ++ DQD ++ I CS+L YA+ VFS ++P+
Sbjct: 32 LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPN 91
Query: 87 LRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIHT 146
+ LY + + + +SLY R++ + PD+Y I VLKA ++V R+IH
Sbjct: 92 VYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA----CDLKVCREIHA 151
Query: 147 QTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVAXXXXXXXXXXXXXXXXX 206
Q + G + +V ++++Y G + +A+K+FD + +D XXXXXXXXXXXXXX
Sbjct: 152 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATXXXXXXXXXXXXXX 211
Query: 207 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEPDEIAMLAVLSACAD 266
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V +E + VLSAC+D
Sbjct: 212 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSANEFTAVCVLSACSD 271
Query: 267 LGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTM 326
LGALELG W+H+++E + + NALI+MY++ G+I A VF M+ K VI+++TM
Sbjct: 272 LGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTM 331
Query: 327 IAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYK 386
I+ +A+HG +AI+ F M RPN+VT +A+L+ACSH G++D+G FN M+ V+
Sbjct: 332 ISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFN 391
Query: 387 IQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQAL 446
++P+IEHYGC++DLL R G L+EA + +++P E + + G+LL+A H + +L E+
Sbjct: 392 VEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIA 451
Query: 447 RHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHEF 506
+ L + E +SG Y LLSN YA+ G+W ES +R+ MR++G++K PG S IE++N++HEF
Sbjct: 452 KRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEF 511
Query: 507 LAGDRSDSQLHGIY 521
L GD + IY
Sbjct: 512 LVGDIAHPHKEAIY 521
BLAST of Carg12922 vs. TAIR10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 310.1 bits (793), Expect = 2.8e-84
Identity = 234/494 (47.37%), Postives = 308/494 (62.35%), Query Frame = 0
Query: 29 SLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHAC---SSLGLYLYAFSVFSNKAHP 88
S L C + QIH ML L QD+ +++F+ C +S YA VF P
Sbjct: 19 SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78
Query: 89 DLRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIH 148
D L+N ++ S + P ++ LY R+L ++YT P +LKA LSA E QIH
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 149 TQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVAXXXXXXXXXXXXXXXX 208
Q G + DV SLI Y+ G A LFD + XXXXXXXXXXXXXXXX
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPXXXXXXXXXXXXXXXXXXX 198
Query: 209 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEPDEIAMLAVLSACA 268
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VEPD +++ LSACA
Sbjct: 199 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPDNVSLANALSACA 258
Query: 269 DLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWST 328
LGALE G+WIH+Y+ K + L LIDMYAK G + ALEVF+N+K KSV W+
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318
Query: 329 MIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVY 388
+I+ A HG G +AI F+ M+K ++PN +TF A+L+ACS+ G+V+ G+ F M+ Y
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378
Query: 389 KIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQA 448
++P IEHYGC++DLL RAG L EA++ Q+MP + NA IWG+LL A H++ +L E+
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
Query: 449 LRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHE 508
L ++P + G Y +N +A +W+++ R++M+ GV K PG S I + HE
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 498
Query: 509 FLAGDRSDSQLHGI 520
FLAGDRS ++ I
Sbjct: 499 FLAGDRSHPEIEKI 512
BLAST of Carg12922 vs. TAIR10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 307.0 bits (785), Expect = 2.4e-83
Identity = 250/616 (40.58%), Postives = 334/616 (54.22%), Query Frame = 0
Query: 29 SLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHACSSLGLY---LYAFSVFSNKAHP 88
SLL NC+ + + IH M+ L N LS+ I C + YA SVF P
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97
Query: 89 DLRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIH 148
+L ++NT + + +S P++A+ LY ++ GL P+SYT PFVLK+ + A + G+QIH
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 149 TQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVAXXXXXXXXXXXXXXXX 208
+ G D D+ V TSLI MY G + DA K+FD + XXXXXXXXXXXXXXXX
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRXXXXXXXXXXXXXXXXXXX 217
Query: 209 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEPDE----------- 268
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V PDE
Sbjct: 218 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTNVRPDESTMVTVVSACA 277
Query: 269 ------------------------------------------------------------ 328
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 337
Query: 329 ------------------------------IAMLAVLSACADLGALELGEWIHNYIEKH- 388
+ ML++L ACA LGA+++G WIH YI+K
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397
Query: 389 -SLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDM 448
+ L +LIDMYAK G+I A +VF ++ HKS+ +W+ MI A+HG + D+
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457
Query: 449 FLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLA 508
F RM K ++P+++TF+ +LSACSH GM+D+GR+ F M YK+ P++EHYGCMIDLL
Sbjct: 458 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 517
Query: 509 RAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTL 539
+G +EA+++ M E + IW SLL A H + +L E +L K+EPEN G+Y L
Sbjct: 518 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 577
BLAST of Carg12922 vs. Swiss-Prot
Match:
sp|Q9FMA1|PP433_ARATH (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)
HSP 1 Score: 440.3 bits (1131), Expect = 3.2e-122
Identity = 261/510 (51.18%), Postives = 346/510 (67.84%), Query Frame = 0
Query: 27 LTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPD 86
+TSL + + + + Q H +M+ L++DNL +++FI ACS+ G YA+SVF+++ P+
Sbjct: 18 VTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPN 77
Query: 87 LRLYNTAVKALSQTSSP---INAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQ 146
L+NT ++ALS P AI++Y ++ +PD++T PFVLK V++S V GRQ
Sbjct: 78 TYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQ 137
Query: 147 IHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVA--XXXXXXXXXXXX 206
IH Q V G D+ V+V T LIQMY SCG + DARK+FD + KDV
Sbjct: 138 IHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGE 197
Query: 207 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEPDEIAMLAVL 266
XXXXXXXXXXXXXXXXXXXXX VEPDE+ +LAVL
Sbjct: 198 MDEARSLLEMMPCWVRNEVXXXXXXXXXXXXXXXXXXXXXFQRMLMENVEPDEVTLLAVL 257
Query: 267 SACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVI 326
SACADLG+LELGE I +Y++ + R V L NA+IDMYAKSGNI +AL+VFE + ++V+
Sbjct: 258 SACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVV 317
Query: 327 TWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRM 386
TW+T+IA +A HG G +A+ MF RM KA VRPN+VTFIAILSACSHVG VD+G+ FN M
Sbjct: 318 TWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSM 377
Query: 387 QSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADL 446
+S Y I P IEHYGCMIDLL RAG L+EA ++ + MP++ANAAIWGSLLAASN H D +L
Sbjct: 378 RSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLEL 437
Query: 447 AEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINN 506
E+AL L KLEP NSGNY LL+N Y+ LGRW+ES M+R +M+ GVKK G S IE+ N
Sbjct: 438 GERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVEN 497
Query: 507 RVHEFLAGDRSDSQLHGIYPVLCNIIVQLK 532
RV++F++GD + Q+ I+ +L + +Q++
Sbjct: 498 RVYKFISGDLTHPQVERIHEILQEMDLQIQ 527
BLAST of Carg12922 vs. Swiss-Prot
Match:
sp|Q9SIL5|PP165_ARATH (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)
HSP 1 Score: 325.9 bits (834), Expect = 8.8e-88
Identity = 225/472 (47.67%), Postives = 322/472 (68.22%), Query Frame = 0
Query: 42 QIHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTS 101
+I+ ++ L Q + ++++ + C + YA +F+ ++P++ LYN+ ++A + S
Sbjct: 28 KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87
Query: 102 SPINAISLYSRILIEGLR-PDSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVA 161
+ I +Y ++L + PD +T PF+ K+ L + +G+Q+H G V
Sbjct: 88 LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147
Query: 162 TSLIQMYSSCGCVSDARKLFDLVDFKDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 221
+LI MY + DA K+FD + +D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 207
Query: 222 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEPDEIAMLAVLSACADLGALELGEWIHNYI 281
XXXXXXXXXXXXXXXXXXXXXXX +EPDEI++++VL +CA LG+LELG+WIH Y
Sbjct: 208 XXXXXXXXXXXXXXXXXXXXXXXEMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267
Query: 282 EKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAI 341
E+ + + NALI+MY+K G I +A+++F M+ K VI+WSTMI+ A HG AI
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327
Query: 342 DMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDL 401
+ F M++A+V+PN +TF+ +LSACSHVGM G YF+ M+ Y+I+P+IEHYGC+ID+
Sbjct: 328 ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387
Query: 402 LARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNY 461
LARAG L+ A ++ + MP + ++ IWGSLL++ T + D+A A+ HL +LEPE+ GNY
Sbjct: 388 LARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNY 447
Query: 462 TLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHEFLAGDRS 513
LL+N YA LG+W + +RK++RN +KK PGGS IE+NN V EF++GD S
Sbjct: 448 VLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNS 499
BLAST of Carg12922 vs. Swiss-Prot
Match:
sp|Q9FIF7|PP435_ARATH (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E41 PE=3 SV=1)
HSP 1 Score: 313.5 bits (802), Expect = 4.5e-84
Identity = 223/494 (45.14%), Postives = 326/494 (65.99%), Query Frame = 0
Query: 27 LTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPD 86
L S+L +C++ H+ IH ++ DQD ++ I CS+L YA+ VFS ++P+
Sbjct: 32 LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPN 91
Query: 87 LRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIHT 146
+ LY + + + +SLY R++ + PD+Y I VLKA ++V R+IH
Sbjct: 92 VYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA----CDLKVCREIHA 151
Query: 147 QTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVAXXXXXXXXXXXXXXXXX 206
Q + G + +V ++++Y G + +A+K+FD + +D XXXXXXXXXXXXXX
Sbjct: 152 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATXXXXXXXXXXXXXX 211
Query: 207 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEPDEIAMLAVLSACAD 266
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V +E + VLSAC+D
Sbjct: 212 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSANEFTAVCVLSACSD 271
Query: 267 LGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTM 326
LGALELG W+H+++E + + NALI+MY++ G+I A VF M+ K VI+++TM
Sbjct: 272 LGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTM 331
Query: 327 IAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYK 386
I+ +A+HG +AI+ F M RPN+VT +A+L+ACSH G++D+G FN M+ V+
Sbjct: 332 ISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFN 391
Query: 387 IQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQAL 446
++P+IEHYGC++DLL R G L+EA + +++P E + + G+LL+A H + +L E+
Sbjct: 392 VEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIA 451
Query: 447 RHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHEF 506
+ L + E +SG Y LLSN YA+ G+W ES +R+ MR++G++K PG S IE++N++HEF
Sbjct: 452 KRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEF 511
Query: 507 LAGDRSDSQLHGIY 521
L GD + IY
Sbjct: 512 LVGDIAHPHKEAIY 521
BLAST of Carg12922 vs. Swiss-Prot
Match:
sp|Q9FJY7|PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 310.1 bits (793), Expect = 5.0e-83
Identity = 234/494 (47.37%), Postives = 308/494 (62.35%), Query Frame = 0
Query: 29 SLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHAC---SSLGLYLYAFSVFSNKAHP 88
S L C + QIH ML L QD+ +++F+ C +S YA VF P
Sbjct: 19 SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78
Query: 89 DLRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIH 148
D L+N ++ S + P ++ LY R+L ++YT P +LKA LSA E QIH
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 149 TQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVAXXXXXXXXXXXXXXXX 208
Q G + DV SLI Y+ G A LFD + XXXXXXXXXXXXXXXX
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPXXXXXXXXXXXXXXXXXXX 198
Query: 209 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEPDEIAMLAVLSACA 268
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VEPD +++ LSACA
Sbjct: 199 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPDNVSLANALSACA 258
Query: 269 DLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWST 328
LGALE G+WIH+Y+ K + L LIDMYAK G + ALEVF+N+K KSV W+
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318
Query: 329 MIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVY 388
+I+ A HG G +AI F+ M+K ++PN +TF A+L+ACS+ G+V+ G+ F M+ Y
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378
Query: 389 KIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQA 448
++P IEHYGC++DLL RAG L EA++ Q+MP + NA IWG+LL A H++ +L E+
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
Query: 449 LRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHE 508
L ++P + G Y +N +A +W+++ R++M+ GV K PG S I + HE
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 498
Query: 509 FLAGDRSDSQLHGI 520
FLAGDRS ++ I
Sbjct: 499 FLAGDRSHPEIEKI 512
BLAST of Carg12922 vs. Swiss-Prot
Match:
sp|Q9LN01|PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 307.0 bits (785), Expect = 4.2e-82
Identity = 250/616 (40.58%), Postives = 334/616 (54.22%), Query Frame = 0
Query: 29 SLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHACSSLGLY---LYAFSVFSNKAHP 88
SLL NC+ + + IH M+ L N LS+ I C + YA SVF P
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97
Query: 89 DLRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIH 148
+L ++NT + + +S P++A+ LY ++ GL P+SYT PFVLK+ + A + G+QIH
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 149 TQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVAXXXXXXXXXXXXXXXX 208
+ G D D+ V TSLI MY G + DA K+FD + XXXXXXXXXXXXXXXX
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRXXXXXXXXXXXXXXXXXXX 217
Query: 209 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEPDE----------- 268
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V PDE
Sbjct: 218 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTNVRPDESTMVTVVSACA 277
Query: 269 ------------------------------------------------------------ 328
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 337
Query: 329 ------------------------------IAMLAVLSACADLGALELGEWIHNYIEKH- 388
+ ML++L ACA LGA+++G WIH YI+K
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397
Query: 389 -SLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDM 448
+ L +LIDMYAK G+I A +VF ++ HKS+ +W+ MI A+HG + D+
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457
Query: 449 FLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLA 508
F RM K ++P+++TF+ +LSACSH GM+D+GR+ F M YK+ P++EHYGCMIDLL
Sbjct: 458 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 517
Query: 509 RAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTL 539
+G +EA+++ M E + IW SLL A H + +L E +L K+EPEN G+Y L
Sbjct: 518 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 577
BLAST of Carg12922 vs. TrEMBL
Match:
tr|A0A1S3BR86|A0A1S3BR86_CUCME (pentatricopeptide repeat-containing protein At5g56310 OS=Cucumis melo OX=3656 GN=LOC103492408 PE=4 SV=1)
HSP 1 Score: 789.6 bits (2038), Expect = 4.4e-225
Identity = 462/548 (84.31%), Postives = 497/548 (90.69%), Query Frame = 0
Query: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
M WSFS L KSSSS +IF +P TSLLSNCR H+YQ+HGFMLHRALDQDNL LS
Sbjct: 1 MCWSFSLLSKSSSSFFRPSIFTSPLQFTSLLSNCRHHLHLYQVHGFMLHRALDQDNLFLS 60
Query: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
+FI AC+SLGL YAFS+FSNKAHPDLRLYNTA+KALS+TSSPI+AI LY+RI I+GLRP
Sbjct: 61 QFIDACTSLGLSSYAFSIFSNKAHPDLRLYNTAIKALSKTSSPIDAIWLYTRIQIDGLRP 120
Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
DSY+IPFVLKAVV+LSAVEVGRQIH QTVSS LD DVNVATSLIQMYSSCG VSDARK F
Sbjct: 121 DSYSIPFVLKAVVKLSAVEVGRQIHAQTVSSALDMDVNVATSLIQMYSSCGFVSDARKQF 180
Query: 181 DLVDFKDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
D V FK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 DFVGFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
Query: 241 XXXXXXXXKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
XXXXXXX +VEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 XXXXXXXEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
KSGNI RALEVFENMK KSVITWST+IAA+ALHGLG +AIDMFLRMEK +VRPNEVTF A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGREAIDMFLRMEKEKVRPNEVTFTA 360
Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
ILSACSHVGMVDVGRYYF++MQS+Y+I+P+IEHYGCMIDLLARAGYLQEA KL DMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYRIEPQIEHYGCMIDLLARAGYLQEAHKLLHDMPFE 420
Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANA IWGSLLAASNTH+DA LA+QAL+HLAKLEPENSGNY LLSNTYAALGRWNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHKDAGLAQQALKHLAKLEPENSGNYVLLSNTYAALGRWNESGTVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
K+MRNAGVKKAPGGS IEINNRV+EFLAGD+SDS +H +Y VLC II+QLKMAGSY EEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNRVYEFLAGDKSDSHVHEVYHVLCKIILQLKMAGSYQEEW 540
Query: 541 SKFLNYDE 549
KFLNYDE
Sbjct: 541 CKFLNYDE 548
BLAST of Carg12922 vs. TrEMBL
Match:
tr|A0A0A0LX33|A0A0A0LX33_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G598880 PE=4 SV=1)
HSP 1 Score: 776.2 bits (2003), Expect = 5.0e-221
Identity = 459/541 (84.84%), Postives = 491/541 (90.76%), Query Frame = 0
Query: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
M WSFS L KSSSS + IF + TSLLSNCR H+YQIHGFMLHRALDQDNL LS
Sbjct: 1 MCWSFSLLSKSSSSFFKPAIFTSSLQFTSLLSNCRHHLHLYQIHGFMLHRALDQDNLFLS 60
Query: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
+FI AC+SLGL YAFS+FSNK HPDLRLYNTA+KALS+TSSPINAI LY+RI I+GLRP
Sbjct: 61 QFIDACTSLGLSSYAFSIFSNKTHPDLRLYNTAIKALSKTSSPINAIWLYTRIRIDGLRP 120
Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
DSY+IP VLKAVV+LSAVEVGRQIHTQTVSS LD DVNVATSLIQMYSSCG VSDARKLF
Sbjct: 121 DSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLF 180
Query: 181 DLVDFKDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
D V FK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 DFVGFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
Query: 241 XXXXXXXXKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
XXXXXXX +VEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIV LYNALIDMYA
Sbjct: 241 XXXXXXXEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYA 300
Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
KSGNI RALEVFENMK KSVITWST+IAA+ALHGLGG+AIDMFLRMEKA+VRPNEVTF+A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVA 360
Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
ILSACSHVGMVDVGRYYF++MQS+YKI+P+IEHYGCMIDLLARAGYLQEAQKL DMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 420
Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANA IWGSLLAASNTHRDA+LA+ AL+HLAKLEP NSGNY LLSNTYAALG+WNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHRDAELAQLALKHLAKLEPGNSGNYVLLSNTYAALGKWNESGTVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
K+MRNAGVKKAPGGS IEINN V+EFLAGD SDSQ+H IY VLC II+QLKMAGSY EEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNIVYEFLAGDMSDSQVHEIYHVLCKIILQLKMAGSYQEEW 540
Query: 541 S 542
S
Sbjct: 541 S 541
BLAST of Carg12922 vs. TrEMBL
Match:
tr|A0A2H5PZ18|A0A2H5PZ18_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_180640 PE=4 SV=1)
HSP 1 Score: 585.5 bits (1508), Expect = 1.2e-163
Identity = 330/525 (62.86%), Postives = 403/525 (76.76%), Query Frame = 0
Query: 27 LTSLLSNCR--DPRHIYQIHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAH 86
L +LLS C+ D +H++ HGFM+ R LDQ+N LLSRFI +CSSLG YA+S+F++K+
Sbjct: 36 LVTLLSQCKCADIKHLFAAHGFMIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSK 95
Query: 87 PDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQI 146
PD+ LYNT +KAL QT +P+NA+ LY++I LRPD+Y+ PFVLKAVV+LS +E+GR+I
Sbjct: 96 PDVYLYNTTIKALCQTDNPLNAVILYNKIQASALRPDNYSFPFVLKAVVKLSTIELGREI 155
Query: 147 HTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFK--DVAXXXXXXXXXXXXX 206
H QTV +GLD+DV+V +LIQMY+SC C+ DARK+FD + + +VA
Sbjct: 156 HCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVFDELSLRVWNVAVWNTMVAGYAKVG 215
Query: 207 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEPDEIAMLAVLS 266
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +PDEIAMLA LS
Sbjct: 216 DLNNARALFELMTEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPDEIAMLAALS 275
Query: 267 ACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVIT 326
ACA LGA+ELGEWIHNYIE++ L IVPL NALIDMYAKSG IG+AL+VFENMK+KSVIT
Sbjct: 276 ACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFENMKNKSVIT 335
Query: 327 WSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQ 386
W+TMIA +ALHGLG +A+DMF RME+ARV+PNE+TFIAILSAC HVG+V++GR YFN M+
Sbjct: 336 WTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVELGRRYFNIMK 395
Query: 387 SVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLA 446
S Y I+P+IE YGCMIDLL RAGYLQEA+KL + MP+EANAAIWGSLLAASN + D +L
Sbjct: 396 SRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAASNIYGDVELG 455
Query: 447 EQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNR 506
E AL+HL KLEP NSGNY +LSN YA LGRWNESG +RKVMR+ GVKK PG S+IE++ R
Sbjct: 456 ECALQHLIKLEPHNSGNYAILSNIYAILGRWNESGKIRKVMRDMGVKKMPGCSYIEVSKR 515
Query: 507 VHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEWSKFLNYD 548
VHEF+AGD S +Y +LC I Q+K A E+S L D
Sbjct: 516 VHEFVAGDTSHPDFDRLYQILCKINGQMKFAEHLQNEFSGVLESD 560
BLAST of Carg12922 vs. TrEMBL
Match:
tr|A0A200RCJ8|A0A200RCJ8_9MAGN (Pentatricopeptide repeat OS=Macleaya cordata OX=56857 GN=BVC80_1209g7 PE=4 SV=1)
HSP 1 Score: 583.2 bits (1502), Expect = 6.2e-163
Identity = 354/522 (67.82%), Postives = 411/522 (78.74%), Query Frame = 0
Query: 27 LTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPD 86
L SLL C + +H+ HGFM+ R LDQ+NLLLS+FI CS LG Y F VF+ K PD
Sbjct: 24 LLSLLKQCCNFKHLNLTHGFMVPRGLDQNNLLLSKFIETCSFLGFTDYGFKVFTLKTQPD 83
Query: 87 LRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIHT 146
+ LYNT +KALSQT S +AI +Y+R+ G RPD+Y+ PFVLK+VV LSAVE G QIH
Sbjct: 84 IYLYNTMIKALSQTDSAKDAIFIYNRLQTMGFRPDTYSFPFVLKSVVHLSAVEAGTQIHG 143
Query: 147 QTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVAXXXXXXXXXXXXXXXXX 206
Q+V +GLD+DV+V T LIQMYS+CG + DARKLFD + +D+ XXXXXXXXXXXXX
Sbjct: 144 QSVRTGLDSDVHVVTGLIQMYSACGFICDARKLFDSMPLRDLVSWNAXXXXXXXXXXXXX 203
Query: 207 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEPDEIAMLAVLSACAD 266
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +EPDEIAMLAVLSACA
Sbjct: 204 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDIEPDEIAMLAVLSACAH 263
Query: 267 LGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTM 326
LGALELGEWIHNYI+K +IVPL NALIDMY KSG+I +A+EVFE MKH+SVITW+TM
Sbjct: 264 LGALELGEWIHNYIDKRGWSKIVPLTNALIDMYVKSGSIEKAVEVFEKMKHRSVITWTTM 323
Query: 327 IAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYK 386
IA +ALHGLG +A++MF RME+ R++PNEVTFIAILSAC HVG+VD+GR+YFN M S Y
Sbjct: 324 IAGLALHGLGREALEMFSRMERTRIKPNEVTFIAILSACCHVGLVDMGRWYFNNMSSQYH 383
Query: 387 IQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQAL 446
I+P+IEHYGCMIDLL RAGYLQEA +L + MP+EAN AIWGSLLAAS H D +L E AL
Sbjct: 384 IKPKIEHYGCMIDLLGRAGYLQEAHELVKGMPFEANGAIWGSLLAASRIHGDVELGECAL 443
Query: 447 RHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHEF 506
+HL +EP NSGNYTLLSN YAA GRWNE GMVRK MR+ GVKK PGGS IE+NNR HEF
Sbjct: 444 KHLIDMEPHNSGNYTLLSNIYAASGRWNEVGMVRKAMRDKGVKKMPGGSSIELNNRFHEF 503
Query: 507 LAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEWSKFLNYDE 549
+AG +S Q IY VL + QL+MAG E L YDE
Sbjct: 504 IAGGQSHPQSQRIYEVLYEVNGQLRMAGYISNESGGLLEYDE 545
BLAST of Carg12922 vs. TrEMBL
Match:
tr|A5BJ29|A5BJ29_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_041201 PE=4 SV=1)
HSP 1 Score: 571.2 bits (1471), Expect = 2.4e-159
Identity = 353/530 (66.60%), Postives = 427/530 (80.57%), Query Frame = 0
Query: 8 LCKSSSSLVESTIFAA----PFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFI 67
L ++S + + ST AA + L SLL C + +H++Q H FML R LDQDN+LLSRFI
Sbjct: 21 LLQTSRAALFSTATAAAASPSYHLLSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFI 80
Query: 68 HACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSY 127
ACSSLG Y+ S+F++K PD+ LYNT +KALS AI LY+RIL LR D+Y
Sbjct: 81 EACSSLGFSHYSHSIFTHKTRPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTY 140
Query: 128 TIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLV 187
++PFVLKAVV+L A+ VGRQIH Q + +GL +D++V T+LIQMYSSCGCVS+AR+LFD V
Sbjct: 141 SLPFVLKAVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGV 200
Query: 188 DFKDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 247
F+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 201 CFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 260
Query: 248 XXXXXKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSG 307
XXXX +VEPDEIAMLA LSACA LGALELGEWIHNYI+KH L +IVPL NALIDMYAK G
Sbjct: 261 XXXXEEVEPDEIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCG 320
Query: 308 NIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIAILS 367
I +ALEVF+NM+HKSVITW++MI +ALHGLG +A++MF ME+ R++PNE+TF+AILS
Sbjct: 321 KIEKALEVFKNMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILS 380
Query: 368 ACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANA 427
AC HVG+V++GR+YF M + Y I+P+I+HYGCMIDLL RAG+LQEAQ+L + MP+EANA
Sbjct: 381 ACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANA 440
Query: 428 AIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVM 487
IWGSLLAA+ H DA+L +QAL+HL K+EP NSGNYTLLSN YA +WNE+GMVRKVM
Sbjct: 441 PIWGSLLAAARIHGDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVM 500
Query: 488 RNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMA 534
R+ GVKK PGGS IE+NNRVHEF+AGD+ Q I+ VLC +Q K+A
Sbjct: 501 RDTGVKKMPGGSCIEVNNRVHEFVAGDKLHPQSERIFEVLCKXNLQSKIA 550
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_023515616.1 | 2.8e-268 | 97.63 | pentatricopeptide repeat-containing protein At5g56310 [Cucurbita pepo subsp. pep... | [more] |
| XP_022987264.1 | 2.6e-266 | 97.81 | pentatricopeptide repeat-containing protein At5g56310 [Cucurbita maxima] | [more] |
| XP_022960640.1 | 3.2e-264 | 97.26 | pentatricopeptide repeat-containing protein At5g56310 [Cucurbita moschata] | [more] |
| XP_022147643.1 | 3.0e-225 | 83.76 | pentatricopeptide repeat-containing protein At5g56310 [Momordica charantia] >XP_... | [more] |
| XP_008450993.1 | 6.6e-225 | 84.31 | PREDICTED: pentatricopeptide repeat-containing protein At5g56310 [Cucumis melo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G56310.1 | 1.8e-123 | 51.18 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT2G20540.1 | 4.9e-89 | 47.67 | mitochondrial editing factor 21 | [more] |
| AT5G59200.1 | 2.5e-85 | 45.14 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT5G66520.1 | 2.8e-84 | 47.37 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G08070.1 | 2.4e-83 | 40.58 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
