Carg12906 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCTCATTCCCAAATCCTTCCTTCGGCCATTGCTCCTTTATATCACCATCCAATCCATCCTCATCTACGCACTTCCCCTTATCTTTTCCGCGCCTTTCTTCCCTCGCTGCCCTCCCTCCAATTTCATCCACCAAAAATGGGTCCGTTTCGAAAATTCGTGCCAAGTTCGAGAAATTTCAAGGCGAGATTCCCCAGGATGATACACAAGAACCCAATCCGTCAATGTCGTTGCAACAACAACAACAACAGCCTTCTGTGAGTCAAGAGGTTGAAGAAGATGACAGGTTTTCAATTTCTCTTCCTCCTCACTGTTTGTTTACTGAATTTTAAAATTGTTTGAACCCTAAAAGTTAATAGTGGAATGATGGAAAGATGGAAAGATTCTCATGGTGGCTCTTATTTGATTGATTAATTAGTTGCATATAATGAAGAGCTAGGAGGTATGGATCTTTCAAGCTAATGGAGGCTTTGTGACCCATAAGTCTCTAGGGAGATAGACTCAAAATGGTTTTAAATTATGGTTGAATGATGAAGAACCAAGTTCAGTAAACCCCAAGGGCTGGCCATGGTGGATTTCTTGGTCTAGAAAGTTCATTTATCCCCTAGGAGTGATCCTGAAGTAGCGGCTTGAGATGTTTTGGAGGGTAAGGTGATGCTGGTAGTAAGATATCCTCCAAAGTCCAAAGAGGGAGTATGTAACAACCCAAGGCCACCGCTAACAGATATTGTCCGCTTTGGACCGTTACTTATTGTTGTCAGCCTCACGGTTTTAAAACACGTCTACTTAGAGAGAGGTTTCCACACCCTTATAAGAAATGCTTCGTTCACCTCTCCAGTCAATGTGTGGTCTCGCAATTCACCTCCTTGAGGGCCGATGTCCTCACTGACACCGCCCATTGTCTGGCTCTGATACTATTTGTAACAGCCCAAGACCACCACTAATAGATATTGTCCGTTTTGGCTCGTTACGTATCACCGTCAGCCTCACGGTTTTAAAACGTGTCTACTAGAGAAAGGTTTCCACACTCTTATAAGAAATGTTTTGTTCACCTCTCCAACCAACGTGGGATCTCAAAGAATCGGACCATGAGCATAAGGCAAGAAGTTGATTCTCTGGAAGCTAAGAAATGCTTTAACTAATTGTTTTTACTGTTTGATCATCTATATGACTATTACCAACCACCATAGGTTGACCTAGTAGTCAATAAAGACCTTGTAAATAATACAAAGAAGTGGGAGAGAACGAGTTCAAGCCATGGTAGCCACCTACCTAAGAACATGTCATATATTCTTTTGCAGATAGACTAGACATGTTCAAATTAGCTAGGCAACGCTCAGTTTGGCTGAGTTTATAAGTAAGGAACATTATCTCTATTGGTATGAGGTCTTTTGGGGAAACCAAAAGCAAAGTCACGAGACTTTATGCTCAAAGTGGACAATATCATAATACCATTGTGGAGGGTCGTGATTCCTAACATATTTGCATACCATTGTAGAGAGTCGTGATTCCTAACATATTTGCTAGTACTATTCACTAGAAGTAAACGTTCTCAATTGATACGAAATGAAAGGAGGAACAGTATTGGCCATCTTTTTGTTTTGTTTTATAAAGATTTTTGTGAAATTGAAATATCCATTCTCATTTGGTTGGTGAAGCAGGGCTTTCTCAATGTTTTTACTCTCACTTTCAGCTGCTTGCCTTCAGACTTGGAGGGAGCAGTCAGGCAATCTGGTGAAGCTGCTGGTTTGTTTGTGTCTTCAGGAGGACTAAGAGCAATAGTATGATACTCTTTTTGCTAATCTTTGCCAAATCTTATGCCACTTCTCTATATATATGCACAAATTATGACAGAACTTGAAAACGCTTGATATTTCCAAATTGCAGCCTCCCCAAATCACCTGAGTAGTATGTTGCTGTAAATTTAGATTCTTCCTGTATAATTTGCCATGCTTGGTTGCAAGGGATCCATTGCTACTAATCTCTGAAACGACCTACTCGTTCGAATGCCAGTTTTGAGACATTTCATGATTCCCCGATTCATTTCTATATCTCCCTAAACAGCTCCATGCTGTGCTCATGATATTGTCCTCTTCGGACTTTCCATTTTGACTTCTCTTCAAAGTTTTTAAAACGCGTCTACTATGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTTCCTAACCGACGTGGGATCTCACAATCCACACATTTTCTTTTCAGGTTGAGCTCCTTATCCCCCAGCTACAGTTTCTGGACGATGAAGGTGCTCAAGCTGAACTCTGGGAACTGTCCAGAGTTTTCTTGGAGTCAGTCATTGAGGAAACAAAATGTGAGGTAAGTAGAATATGGAGTTACCACTTCAAGGCCCTGTTTACAATCAAGAATTGAATTTGGAGAACACTTGGAATATATTATACCATGGAATGTGTTACAAAGAAAACAGTAGAATTTCAAAGTTCTTAGGATGTTTATTCACTAGCTTTGTAATATACATATCTAAGTAATGCAAATTTAATTGCTAGAAAGTTAAAGCTGTGTTTCCAGATGCTGGGGCCGCTGCACTTCTTGAATATCGATGGAAAGATGTTTCCTTCAAAATTTCCAGGTAAGTTCCATGTAACATACAATTTTGTGTACTCCAAAAGGTTGAGCTAAAGTCGATTTTTCGCAATCTGAATCTGTATGTTCTCTTCGTATGGTTGTCGTTCTCAGCTTAAGCGACCGAAAACCTGTAGATACTGCAGATGAGATAGTTGTCATGGTTGTTCCTGATTATCAAATGTTGGAAAATGTGGAGAAAATAGCAGCTGCCCTCTCGGATGATCCGGTAAAAATCTGAACCATTCCATTTGCTGTTGAAGTACATTTTCGAAGTACTGCCTAATGGGGTATATATATGGTTCAGTTTACTATAATATAAATTTACCAGATATAATCATCTATTATATATAACTATCTACCATATATATCTTTGTGACCATTTTTCATATATAACAATTGAATAAGCTATAAATAAGCAGCAGGCTCTATAAACTCTAACATCCACCTCTTTAGTTTTTCTACATTGATGGCAGCCAAGGCCTCTTATCATGTGGAATCCCCGTCTCATCAGCGAAGATGTAGGGGTCGGATTTAACGTTCGAAAATTGAGAAGATACTTTTTAAGGTAAATTTCAAAACTCTTAGTAGACATCAGCATTATGAAACAGTTACTTACAAAAGATGATCATCATAGCTCAATAAAGTGTTCTAATGTGAAGTAAATGTCTAACCTCATACATAAAAGTTGCTAAGGAGAAAAGAGGTCTCATATACAAGAGGCTCTAAACTTAGGATTTGTCCAACTCAACCTCTACTTTGTTCTTTTTTGTGCAGCACATTTACAACAGTCTACTCCATGAGGCCTTTGCCATCTGGTGCTGTATTTAGAGCTTATCCTGGGTAAGGAGATTTTAACATCTTATGAGATTCTTTAGATCTATTCACCGTGCTGAAAATGCAGAAAAACTCGGTCCAGTCTGTTAGAATCACACAATAACGCACACCCTCAATCTAGATGAACACAAAAAATAAGAGAGAGAAAATGCTAAGAGAAAATGACTTCAAGTATATACAATAAAAGAGAATACAAAGAATACAGAAAGCACATTTTCAAATCATTGTCTAGGGATATATATATAGTTCAGTTTATTATATATAGTTTTACCAGATGTAACCATCTACCGTATATAGATTTACCAACTATATATAAAACTATTTACCATATCTAGTTTTACGGTATAACAATTGGGTAAGCTATAAATAAGCAGTAGACTCTATAACCCAACACGGTCGTATAGGGAACAACCCAGATTGTGCAGATTACAGTTTAGTTGTATGACCTGAACTAACTTAAGAAAGTAGTAAAAAACTATGATATATCTTACATGAAAGTAACGGAACCATTAATGTGAAATAATAATCAAACTCAAGGCCGTGGTCACTCATCTTACAGCAAATATCCATGGTTGAACTTTCTCCAACCACTTTCTTCTTCTTGTTCTTCGTTTTTTGGGGGAGTTTCTTTTTTGAAGAAGTGATTGACATCTTTGCAATTGTTAACCAGGTTGTGGAAAGTGTTCTCTGATGATAAAGATAGGCCAGGCAGGTATTTGCTTGCCAAAGAATTAATAAGCCGACCGGATGCTGGAGACCTCGAGGTCAGTTACCTAAGAAACTAACATATGAGAAATTATCATGATACTATTAATGTAACAACCCAAGTCCATTGCTAGCAGATATTGTCCGCTTTGACCTGTTACGTATCACTGTCAGTCTCGCGGTTCTAAAACGCGTCTATTAGAGAGAGATTTCCACACACTTATAAAAACTGCTTCGTTCCCCTCTCCAACCGATGTGAGATCTAACAATATTTGTAACAGCCCAAGCCTACTGCTAACTGATATTGTCCTCTTTTGGGCTTCCCTTCCGAGCTTCCTCTTAAGGTAA ATGGCTTCCTCATTCCCAAATCCTTCCTTCGGCCATTGCTCCTTTATATCACCATCCAATCCATCCTCATCTACGCACTTCCCCTTATCTTTTCCGCGCCTTTCTTCCCTCGCTGCCCTCCCTCCAATTTCATCCACCAAAAATGGGTCCGTTTCGAAAATTCGTGCCAAGTTCGAGAAATTTCAAGGCGAGATTCCCCAGGATGATACACAAGAACCCAATCCGTCAATGTCGTTGCAACAACAACAACAACAGCCTTCTGTGAGTCAAGAGGTTGAAGAAGATGACAGTCAATGTGTGGTCTCGCAATTCACCTCCTTGAGGGCCGATGTCCTCACTGACACCGCCCATTGTCTGGCTCTGATACTATTTGGCTTTCTCAATGTTTTTACTCTCACTTTCAGCTGCTTGCCTTCAGACTTGGAGGGAGCAGTCAGGCAATCTGGTGAAGCTGCTGGTTTGTTTGTGTCTTCAGGAGGACTAAGAGCAATAGTTGAGCTCCTTATCCCCCAGCTACAGTTTCTGGACGATGAAGGTGCTCAAGCTGAACTCTGGGAACTGTCCAGAGTTTTCTTGGAGTCAGTCATTGAGGAAACAAAATGTGAGAAAGTTAAAGCTGTGTTTCCAGATGCTGGGGCCGCTGCACTTCTTGAATATCGATGGAAAGATGTTTCCTTCAAAATTTCCAGCTTAAGCGACCGAAAACCTGTAGATACTGCAGATGAGATAGTTGTCATGGTTGTTCCTGATTATCAAATGTTGGAAAATGTGGAGAAAATAGCAGCTGCCCTCTCGGATGATCCGCCAAGGCCTCTTATCATGTGGAATCCCCGTCTCATCAGCGAAGATGTAGGGGTCGGATTTAACGTTCGAAAATTGAGAAGATACTTTTTAAGCACATTTACAACAGTCTACTCCATGAGGCCTTTGCCATCTGGTGCTGTATTTAGAGCTTATCCTGGGTTGTGGAAAGTGTTCTCTGATGATAAAGATAGGCCAGGCAGGTATTTGCTTGCCAAAGAATTAATAAGCCGACCGGATGCTGGAGACCTCGAGTCTCGCGGTTCTAAAACGCGTCTATTAGAGAGAGATTTCCACACACTTATAAAAACTGCTTCGTTCCCCTCTCCAACCGATGTGAGATCTAACAATATTTGTAACAGCCCAAGCCTACTGCTAACTGATATTGTCCTCTTTTGGGCTTCCCTTCCGAGCTTCCTCTTAAGGTAA ATGGCTTCCTCATTCCCAAATCCTTCCTTCGGCCATTGCTCCTTTATATCACCATCCAATCCATCCTCATCTACGCACTTCCCCTTATCTTTTCCGCGCCTTTCTTCCCTCGCTGCCCTCCCTCCAATTTCATCCACCAAAAATGGGTCCGTTTCGAAAATTCGTGCCAAGTTCGAGAAATTTCAAGGCGAGATTCCCCAGGATGATACACAAGAACCCAATCCGTCAATGTCGTTGCAACAACAACAACAACAGCCTTCTGTGAGTCAAGAGGTTGAAGAAGATGACAGTCAATGTGTGGTCTCGCAATTCACCTCCTTGAGGGCCGATGTCCTCACTGACACCGCCCATTGTCTGGCTCTGATACTATTTGGCTTTCTCAATGTTTTTACTCTCACTTTCAGCTGCTTGCCTTCAGACTTGGAGGGAGCAGTCAGGCAATCTGGTGAAGCTGCTGGTTTGTTTGTGTCTTCAGGAGGACTAAGAGCAATAGTTGAGCTCCTTATCCCCCAGCTACAGTTTCTGGACGATGAAGGTGCTCAAGCTGAACTCTGGGAACTGTCCAGAGTTTTCTTGGAGTCAGTCATTGAGGAAACAAAATGTGAGAAAGTTAAAGCTGTGTTTCCAGATGCTGGGGCCGCTGCACTTCTTGAATATCGATGGAAAGATGTTTCCTTCAAAATTTCCAGCTTAAGCGACCGAAAACCTGTAGATACTGCAGATGAGATAGTTGTCATGGTTGTTCCTGATTATCAAATGTTGGAAAATGTGGAGAAAATAGCAGCTGCCCTCTCGGATGATCCGCCAAGGCCTCTTATCATGTGGAATCCCCGTCTCATCAGCGAAGATGTAGGGGTCGGATTTAACGTTCGAAAATTGAGAAGATACTTTTTAAGCACATTTACAACAGTCTACTCCATGAGGCCTTTGCCATCTGGTGCTGTATTTAGAGCTTATCCTGGGTTGTGGAAAGTGTTCTCTGATGATAAAGATAGGCCAGGCAGGTATTTGCTTGCCAAAGAATTAATAAGCCGACCGGATGCTGGAGACCTCGAGTCTCGCGGTTCTAAAACGCGTCTATTAGAGAGAGATTTCCACACACTTATAAAAACTGCTTCGTTCCCCTCTCCAACCGATGTGAGATCTAACAATATTTGTAACAGCCCAAGCCTACTGCTAACTGATATTGTCCTCTTTTGGGCTTCCCTTCCGAGCTTCCTCTTAAGGTAA MASSFPNPSFGHCSFISPSNPSSSTHFPLSFPRLSSLAALPPISSTKNGSVSKIRAKFEKFQGEIPQDDTQEPNPSMSLQQQQQQPSVSQEVEEDDSQCVVSQFTSLRADVLTDTAHCLALILFGFLNVFTLTFSCLPSDLEGAVRQSGEAAGLFVSSGGLRAIVELLIPQLQFLDDEGAQAELWELSRVFLESVIEETKCEKVKAVFPDAGAAALLEYRWKDVSFKISSLSDRKPVDTADEIVVMVVPDYQMLENVEKIAAALSDDPPRPLIMWNPRLISEDVGVGFNVRKLRRYFLSTFTTVYSMRPLPSGAVFRAYPGLWKVFSDDKDRPGRYLLAKELISRPDAGDLESRGSKTRLLERDFHTLIKTASFPSPTDVRSNNICNSPSLLLTDIVLFWASLPSFLLR
BLAST of Carg12906 vs. NCBI nr
Match: XP_022946876.1 (probable linoleate 9S-lipoxygenase 5 [Cucurbita moschata]) HSP 1 Score: 542.7 bits (1397), Expect = 1.0e-150 Identity = 298/352 (84.66%), Postives = 300/352 (85.23%), Query Frame = 0
BLAST of Carg12906 vs. NCBI nr
Match: XP_023545377.1 (probable linoleate 9S-lipoxygenase 5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 542.7 bits (1397), Expect = 1.0e-150 Identity = 298/352 (84.66%), Postives = 300/352 (85.23%), Query Frame = 0
BLAST of Carg12906 vs. NCBI nr
Match: XP_023546456.1 (probable linoleate 9S-lipoxygenase 5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 542.7 bits (1397), Expect = 1.0e-150 Identity = 298/352 (84.66%), Postives = 300/352 (85.23%), Query Frame = 0
BLAST of Carg12906 vs. NCBI nr
Match: XP_022998962.1 (probable linoleate 9S-lipoxygenase 5 [Cucurbita maxima]) HSP 1 Score: 535.8 bits (1379), Expect = 1.3e-148 Identity = 287/352 (81.53%), Postives = 290/352 (82.39%), Query Frame = 0
BLAST of Carg12906 vs. NCBI nr
Match: XP_008454557.1 (PREDICTED: uncharacterized protein LOC103494946 [Cucumis melo]) HSP 1 Score: 493.4 bits (1269), Expect = 7.3e-136 Identity = 268/352 (76.14%), Postives = 276/352 (78.41%), Query Frame = 0
BLAST of Carg12906 vs. TAIR10
Match: AT5G27560.1 (Domain of unknown function (DUF1995)) HSP 1 Score: 370.9 bits (951), Expect = 9.9e-103 Identity = 181/217 (83.41%), Postives = 198/217 (91.24%), Query Frame = 0
BLAST of Carg12906 vs. TrEMBL
Match: tr|A0A1S3BZN3|A0A1S3BZN3_CUCME (uncharacterized protein LOC103494946 OS=Cucumis melo OX=3656 GN=LOC103494946 PE=4 SV=1) HSP 1 Score: 493.4 bits (1269), Expect = 4.8e-136 Identity = 268/352 (76.14%), Postives = 276/352 (78.41%), Query Frame = 0
BLAST of Carg12906 vs. TrEMBL
Match: tr|A0A0A0LLR1|A0A0A0LLR1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G022800 PE=4 SV=1) HSP 1 Score: 493.0 bits (1268), Expect = 6.3e-136 Identity = 268/352 (76.14%), Postives = 277/352 (78.69%), Query Frame = 0
BLAST of Carg12906 vs. TrEMBL
Match: tr|A0A2P4NAY7|A0A2P4NAY7_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_37669 PE=4 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 2.9e-109 Identity = 222/354 (62.71%), Postives = 257/354 (72.60%), Query Frame = 0
BLAST of Carg12906 vs. TrEMBL
Match: tr|A0A2P4ILW1|A0A2P4ILW1_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_58995 PE=4 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 2.9e-109 Identity = 222/354 (62.71%), Postives = 257/354 (72.60%), Query Frame = 0
BLAST of Carg12906 vs. TrEMBL
Match: tr|A0A061F2R0|A0A061F2R0_THECC (Domain of Uncharacterized protein function (DUF1995) isoform 2 (Fragment) OS=Theobroma cacao OX=3641 GN=TCM_026556 PE=4 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 1.7e-104 Identity = 209/340 (61.47%), Postives = 243/340 (71.47%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |