Carg12899 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12899
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	peroxisomal adenine nucleotide carrier 1-like
Location	Cucurbita_argyrosperma_scaffold_043 : 1044162 .. 1046508 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCTGATCTCGAATCGCTCTCGGAGGCTACTTCCGGTGCGATCGGTTCGCTCGTTAGCACCACCATCTTGTACCCGCTTGATACCTGCAAGTCCAAGTACCAAGCCGAGGTTCAAGCCCATGGCCAACAGAAATACAGGTTGCCCACAGCTTCGTATTTGCTTTTCTTGATATGGATTTTTGTGTATTCCCCTGTTATCTCGACGGTTTCTTCCTTGTTTTGGGAACTTTCTCGTTTTGCTTTCAAATCGTGATCTGGGCTATCATTGCTGCTATTGTTACCCTGTTTTTGAAGGAAAATCTATAGTAAATCGAGTTAATCCGATCTTAAGATAATTGAAAATCCATCACGTCATTGATCTCATGACTGTTCAGGCGTCGTAGTTAGTTTCAGCGAATTTTTGGTTGTAAGGCTTGTTCCTTCTCTTTAAGTTTGAATCGAATGATCTAAAGTGTTTGAGCATTTCTGAAGCGGTTGGTGGGAGTTTTGGGATAATTTGAAAGCATCTGTGGCTAATTCAGCCTGCTTGGAATCTGGAAAAGCCCCTGTTATGTATTTTGCTAGCTCCGTGTCGTTGGCTCATAGGAATCTTGTGTAACAGTCCAAGCACACCGTTAGCAGATATTGTCCTCTTTGGGCTTTCCCCTTCAGACTTCCCCTCAAGGTTTTAAAACGTGTCGGCTAGAGAAAGATTTCGACACCCTAATAAGGAATACTTGGTTCCCCTCTCCAACCGATGTAGGATCTCACAATCCACCTCTCTTGAGGACCCAGCGTCCTCGCTGACTGGTTCTAATACTATTTGTAACAGCCCAAGCCCACCGCTAGCAAATATTGTCCTCTTTGGGCTTTTCCTTCCAGGCTTCCCCGCTTCCCCTCAAGGTTTTAAAACGTGTCTGTTAGGGAGAGGTTTCCACACCCTTATAAGGAATACTTCGTTCCCCTCTCCAACCGATGTAAGATGATTGAATTGAAGTAGGGATGAAAAAAAAAAAAGGCTTGTTTGGGTTCATGGCTTTTAGATCATCAATGAAGTGATGCTTGTGGAAGAACGAATCAATACACAAAACTTGCTATTGATTAACACCTTTGACACAACACAACATAACCACTGCAATGGCCTCCTGGTTCAAAATGGTGCTGCTTTTCTGCAAGAAAACTAATTCAATGCCATAAAAACGTTGGATGTTGTTTTCCTTTTGGCATCTCTATTAATTCCATTGGGTTTGGCTTGTATAGGTATCTTTCAGATGTGTTGTGGGAAGCGATAAAATCGAATCAAGTTCTTTCGCTGTACCAGGGACTGGGAACCAAGAATCTACAATCTTTTGTTTCTCAGTTTTTGTACTTCTATGGGTATAGCTACTTCAAAAGACTATATCTGGCAAAAACTGGGGCTAAATCAATTGGAACAAAAGCAAACCTCTTACTCGCTGCTGCTGCGGGAGCTTGCAATGCCATTTTAACTCAGGTTGAAATATCAAAACTTTAGCTTTCCACTTTTGCAGGCCCTGAATTTGAGTTCTTAGAAGAAAGCATACTATTACCTTAATTGTCAACTTTACGACATCGTAGATTCTTGTTTATGATCCGTAAGACATGTTCTTTTGATGTTGCAATTCCTGAAAATGAGATAAAATCACAAAACAAGGAAAGAAAATCATAGATCTCGACATCTTATACGATGTTTGTTGAGGCTGGCATATCATTGTTTTGGCTACCTAGAAGAGTGAGTATGAATTGTGTTTGGGATTCTGGTCATTGCTATATTGGGCTTAGTTCTTGTAAAGCAGAATATGGTTTTGGCTTCTTATTCATTCATATGTTATAGTTTCTCAGTTCAGCAGTTCTGCTTGTTAAAAGAGTGGCTTGCTTATTATTGAGTGCAACATCGAGCTGCGAAGTTCGATAAATGTTGTCGGTGTATGAAGTTCCAAGCCTCTTCGAGAAGTCTTGTATGCACAAGAGCGCATCTTGATGAAATATTGAAGTTTAATGGCTTAACTGAAACACATAAAAAATGGTTTTCTTGGTTTTTCATTGTGTAGCCCTTGGATACAGCCTCCTCACGAATGCAGACTAGTGCCTTCGGAAAATCGAAAGGGCTTTTCCAGACCCTGACAGAGGGCAGTTGGAGTGATGCATTTGATGGTCTTGGAATTTCATTGCTGCTGACTTCAAACCCTGCCATTCAGGTACTTCTCCTGTCCATGCTCATTTTTTCAGCCATCCATTTGTTTGTACCCGGTGAGACTGAGATCATTAGTGGTCAGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAAAGTGTGGAAACCTTTTCCTAGC

mRNA sequence

ATGAGTTCTGATCTCGAATCGCTCTCGGAGGCTACTTCCGGTGCGATCGGTTCGCTCGTTAGCACCACCATCTTGTACCCGCTTGATACCTGCAAGTCCAAGTACCAAGCCGAGGTTCAAGCCCATGGCCAACAGAAATACAGGTATCTTTCAGATGTGTTGTGGGAAGCGATAAAATCGAATCAAGTTCTTTCGCTGTACCAGGGACTGGGAACCAAGAATCTACAATCTTTTGTTTCTCAGTTTTTGTACTTCTATGGGTATAGCTACTTCAAAAGACTATATCTGGCAAAAACTGGGGCTAAATCAATTGGAACAAAAGCAAACCTCTTACTCGCTGCTGCTGCGGGAGCTTGCAATGCCATTTTAACTCAGGTTGAAATATCAAAACTTTAGCTTTCCACTTTTGCAGGCCCTGAATTTGAGTTCTTAGAAGAAAGCATACTATTACCTTAATTGTCAACTTTACGACATCGTAGATTCTTGTTTATGATCCGTAAGACATGTTCTTTTGATGTTGCAATTCCTGAAAATGAGATAAAATCACAAAACAAGGAAAGAAAATCATAGATCTCGACATCTTATACGATGTTTGTTGAGGCTGGCATATCATTGTTTTGGCTACCTAGAAGAGTGAGTATGAATTGTGTTTGGGATTCTGGTCATTGCTATATTGGGCTTAGTTCTTGTAAAGCAGAATATGGTTTTGGCTTCTTATTCATTCATATGTTATAGTTTCTCAGTTCAGCAGTTCTGCTTGTTAAAAGAGTGGCTTGCTTATTATTGAGTGCAACATCGAGCTGCGAAGTTCGATAAATGTTGTCGGTGTATGAAGTTCCAAGCCTCTTCGAGAAGTCTTGTATGCACAAGAGCGCATCTTGATGAAATATTGAAGTTTAATGGCTTAACTGAAACACATAAAAAATGGTTTTCTTGGTTTTTCATTGTGTAGCCCTTGGATACAGCCTCCTCACGAATGCAGACTAGTGCCTTCGGAAAATCGAAAGGGCTTTTCCAGACCCTGACAGAGGGCAGTTGGAGTGATGCATTTGATGGTCTTGGAATTTCATTGCTGCTGACTTCAAACCCTGCCATTCAGGTACTTCTCCTGTCCATGCTCATTTTTTCAGCCATCCATTTGTTTGTACCCGGTGAGACTGAGATCATTAGTGGTCAGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAAAGTGTGGAAACCTTTTCCTAGC

Coding sequence (CDS)

ATGAGTTCTGATCTCGAATCGCTCTCGGAGGCTACTTCCGGTGCGATCGGTTCGCTCGTTAGCACCACCATCTTGTACCCGCTTGATACCTGCAAGTCCAAGTACCAAGCCGAGGTTCAAGCCCATGGCCAACAGAAATACAGGTATCTTTCAGATGTGTTGTGGGAAGCGATAAAATCGAATCAAGTTCTTTCGCTGTACCAGGGACTGGGAACCAAGAATCTACAATCTTTTGTTTCTCAGTTTTTGTACTTCTATGGGTATAGCTACTTCAAAAGACTATATCTGGCAAAAACTGGGGCTAAATCAATTGGAACAAAAGCAAACCTCTTACTCGCTGCTGCTGCGGGAGCTTGCAATGCCATTTTAACTCAGGTTGAAATATCAAAACTTTAG

Protein sequence

MSSDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKSNQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACNAILTQVEISKL

Homology

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BLAST of Carg12899 vs. NCBI nr
Match: XP_022946759.1 (peroxisomal adenine nucleotide carrier 1-like [Cucurbita moschata])

HSP 1 Score: 237.7 bits (605), Expect = 2.3e-59
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MSSDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKS 60
           MSSDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKS
Sbjct: 1   MSSDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKS 60

Query: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACN 120
           NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACN
Sbjct: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACN 120

Query: 121 AILTQ 126
           AILTQ
Sbjct: 121 AILTQ 125

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BLAST of Carg12899 vs. NCBI nr
Match: XP_023545367.1 (peroxisomal adenine nucleotide carrier 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.3 bits (599), Expect = 1.1e-58
Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 1   MSSDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKS 60
           MS DLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKS
Sbjct: 1   MSLDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKS 60

Query: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACN 120
           NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACN
Sbjct: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACN 120

Query: 121 AILTQ 126
           AILTQ
Sbjct: 121 AILTQ 125

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BLAST of Carg12899 vs. NCBI nr
Match: XP_008454763.1 (PREDICTED: peroxisomal adenine nucleotide carrier 1-like [Cucumis melo] >ABR67418.1 mitochondrial FAD carrier [Cucumis melo subsp. melo])

HSP 1 Score: 230.7 bits (587), Expect = 2.8e-57
Identity = 121/125 (96.80%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 1   MSSDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKS 60
           MS DLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEV+AHGQQKYRYLSDVLWEAIK+
Sbjct: 1   MSFDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVRAHGQQKYRYLSDVLWEAIKN 60

Query: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACN 120
           NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYL KTGAKSIGTKANLLLAAAAGACN
Sbjct: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLEKTGAKSIGTKANLLLAAAAGACN 120

Query: 121 AILTQ 126
           AILTQ
Sbjct: 121 AILTQ 125

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BLAST of Carg12899 vs. NCBI nr
Match: XP_004139184.1 (PREDICTED: peroxisomal adenine nucleotide carrier 1-like [Cucumis sativus] >KGN60898.1 hypothetical protein Csa_2G021690 [Cucumis sativus])

HSP 1 Score: 229.6 bits (584), Expect = 6.3e-57
Identity = 120/125 (96.00%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 1   MSSDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKS 60
           MS DLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEV+AHGQQKYRYLSDVLWEAIK+
Sbjct: 1   MSFDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVRAHGQQKYRYLSDVLWEAIKN 60

Query: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACN 120
           NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFK+LYL KTGAKSIGTKANLLLAAAAGACN
Sbjct: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKKLYLEKTGAKSIGTKANLLLAAAAGACN 120

Query: 121 AILTQ 126
           AILTQ
Sbjct: 121 AILTQ 125

[Close]

BLAST of Carg12899 vs. NCBI nr
Match: XP_022938110.1 (peroxisomal adenine nucleotide carrier 1-like [Cucurbita moschata])

HSP 1 Score: 228.8 bits (582), Expect = 1.1e-56
Identity = 119/125 (95.20%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 1   MSSDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKS 60
           MS DLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEV++HGQ++YRYLSDVLWEAIKS
Sbjct: 1   MSFDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVRSHGQRRYRYLSDVLWEAIKS 60

Query: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACN 120
           NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFK+LYLAKTGAKSIGTKANLLLAAAAGACN
Sbjct: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKKLYLAKTGAKSIGTKANLLLAAAAGACN 120

Query: 121 AILTQ 126
           AILTQ
Sbjct: 121 AILTQ 125

[Close]

BLAST of Carg12899 vs. TAIR10
Match: AT3G05290.1 (peroxisomal adenine nucleotide carrier 1)

HSP 1 Score: 195.7 bits (496), Expect = 1.8e-50
Identity = 98/125 (78.40%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 1   MSSDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKS 60
           M  DLES+SEATSGAIGSL+STTILYPLDTCKSK+QAEV+A GQQKYRYLSDV+WEAI  
Sbjct: 1   MGVDLESVSEATSGAIGSLLSTTILYPLDTCKSKFQAEVRARGQQKYRYLSDVMWEAISK 60

Query: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACN 120
            QV SLYQGLGTKN QSF+SQF+YFY YSYFKR++  +TG+KSIGTKANLL+AAAAGAC 
Sbjct: 61  GQVFSLYQGLGTKNFQSFISQFIYFYSYSYFKRVHSERTGSKSIGTKANLLIAAAAGACT 120

Query: 121 AILTQ 126
           ++L Q
Sbjct: 121 SVLIQ 125

[Close]

BLAST of Carg12899 vs. TAIR10
Match: AT5G27520.1 (peroxisomal adenine nucleotide carrier 2)

HSP 1 Score: 194.9 bits (494), Expect = 3.1e-50
Identity = 97/122 (79.51%), Postives = 110/122 (90.16%), Query Frame = 0


Query: 4   DLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKSNQV 63
           DLES+SEATSGAIGSL+STTILYPLDTCKSK+QAE++  GQQKYRYLSDV WEAI S  V
Sbjct: 6   DLESISEATSGAIGSLLSTTILYPLDTCKSKFQAEIRVRGQQKYRYLSDVFWEAISSGNV 65

Query: 64  LSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACNAIL 123
           LSLYQGLGTKNLQSF+S F+YFY YSYFKRL+  + G+KSIGTKANLL+AAAAGAC ++L
Sbjct: 66  LSLYQGLGTKNLQSFISSFIYFYSYSYFKRLHSQRIGSKSIGTKANLLIAAAAGACTSVL 125

Query: 124 TQ 126
           TQ
Sbjct: 126 TQ 127

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BLAST of Carg12899 vs. Swiss-Prot
Match: sp|Q9MA90|PNC1_ARATH (Peroxisomal adenine nucleotide carrier 1 OS=Arabidopsis thaliana OX=3702 GN=PNC1 PE=1 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.3e-49
Identity = 98/125 (78.40%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 1   MSSDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKS 60
           M  DLES+SEATSGAIGSL+STTILYPLDTCKSK+QAEV+A GQQKYRYLSDV+WEAI  
Sbjct: 1   MGVDLESVSEATSGAIGSLLSTTILYPLDTCKSKFQAEVRARGQQKYRYLSDVMWEAISK 60

Query: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACN 120
            QV SLYQGLGTKN QSF+SQF+YFY YSYFKR++  +TG+KSIGTKANLL+AAAAGAC 
Sbjct: 61  GQVFSLYQGLGTKNFQSFISQFIYFYSYSYFKRVHSERTGSKSIGTKANLLIAAAAGACT 120

Query: 121 AILTQ 126
           ++L Q
Sbjct: 121 SVLIQ 125

[Close]

BLAST of Carg12899 vs. Swiss-Prot
Match: sp|Q8VZS0|PNC2_ARATH (Peroxisomal adenine nucleotide carrier 2 OS=Arabidopsis thaliana OX=3702 GN=PNC2 PE=1 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 5.6e-49
Identity = 97/122 (79.51%), Postives = 110/122 (90.16%), Query Frame = 0


Query: 4   DLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKSNQV 63
           DLES+SEATSGAIGSL+STTILYPLDTCKSK+QAE++  GQQKYRYLSDV WEAI S  V
Sbjct: 6   DLESISEATSGAIGSLLSTTILYPLDTCKSKFQAEIRVRGQQKYRYLSDVFWEAISSGNV 65

Query: 64  LSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACNAIL 123
           LSLYQGLGTKNLQSF+S F+YFY YSYFKRL+  + G+KSIGTKANLL+AAAAGAC ++L
Sbjct: 66  LSLYQGLGTKNLQSFISSFIYFYSYSYFKRLHSQRIGSKSIGTKANLLIAAAAGACTSVL 125

Query: 124 TQ 126
           TQ
Sbjct: 126 TQ 127

[Close]

BLAST of Carg12899 vs. Swiss-Prot
Match: sp|B6ZJZ9|PNC1_SOYBN (Peroxisomal adenine nucleotide carrier 1 OS=Glycine max OX=3847 GN=PNC1 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 6.2e-48
Identity = 99/125 (79.20%), Postives = 113/125 (90.40%), Query Frame = 0


Query: 1   MSSDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKS 60
           M+ DLESL+EATSGAIGSL+STTILYPLDTCK+KYQAE ++ G+ KYR L+DVL EAI +
Sbjct: 1   MNVDLESLAEATSGAIGSLISTTILYPLDTCKTKYQAEARSSGRTKYRNLTDVLLEAISN 60

Query: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACN 120
            QVLSLYQGLGTKNLQSF+SQF+YFYGYSYFKRLYL K+G KSIGTKANL++AAAAGAC 
Sbjct: 61  RQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLEKSGYKSIGTKANLVIAAAAGACT 120

Query: 121 AILTQ 126
           AI TQ
Sbjct: 121 AIATQ 125

[Close]

BLAST of Carg12899 vs. Swiss-Prot
Match: sp|Q76P23|PM34_DICDI (Mitochondrial substrate carrier family protein Q OS=Dictyostelium discoideum OX=44689 GN=mcfQ PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.9e-07
Identity = 38/128 (29.69%), Postives = 59/128 (46.09%), Query Frame = 0


Query: 5   LESLSEATSGAIGSLVSTTILYPLDTCKSKYQAE--VQAHGQQK------YRYLSDVLWE 64
           +E+L  A SG +  + +  + YP  T  ++ Q +   Q  GQQ       Y+   D    
Sbjct: 18  VEALGHAISGGVAGMAAIALTYPFSTVSTRLQVQQKKQQQGQQSEITTVPYKNSIDAFKR 77

Query: 65  AIKSNQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAA 124
            IK     +LY GL +  +    S F+Y+Y Y+  K + L     + +GT  NL +AA A
Sbjct: 78  IIKEENWRTLYSGLKSALIGIGASSFVYYYWYTLLKSISLKLKNKQELGTIENLAIAALA 137

[Close]

BLAST of Carg12899 vs. Swiss-Prot
Match: sp|Q06497|ANT1_YEAST (Peroxisomal adenine nucleotide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ANT1 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-05
Identity = 34/140 (24.29%), Postives = 65/140 (46.43%), Query Frame = 0


Query: 7   SLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQ-----------KYRYLSDVLW 66
           +L  A +GA+ S ++   +YPLD  K+  Q++V     +           +Y+ + D + 
Sbjct: 3   TLESALTGAVASAMANIAVYPLDLSKTIIQSQVSPSSSEDSNEGKVLPNRRYKNVVDCMI 62

Query: 67  EAIKSNQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLA-----------KTGAKSI 125
              K   +L LYQG+    + +FV  F+YF+ Y++ ++ Y+            + G  + 
Sbjct: 63  NIFKEKGILGLYQGMTVTTVATFVQNFVYFFWYTFIRKSYMKHKLLGLQSLKNRDGPITP 122

[Close]

BLAST of Carg12899 vs. TrEMBL
Match: tr|A0A1S3BYW5|A0A1S3BYW5_CUCME (peroxisomal adenine nucleotide carrier 1-like OS=Cucumis melo OX=3656 GN=LOC103495080 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.9e-57
Identity = 121/125 (96.80%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 1   MSSDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKS 60
           MS DLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEV+AHGQQKYRYLSDVLWEAIK+
Sbjct: 1   MSFDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVRAHGQQKYRYLSDVLWEAIKN 60

Query: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACN 120
           NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYL KTGAKSIGTKANLLLAAAAGACN
Sbjct: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLEKTGAKSIGTKANLLLAAAAGACN 120

Query: 121 AILTQ 126
           AILTQ
Sbjct: 121 AILTQ 125

[Close]

BLAST of Carg12899 vs. TrEMBL
Match: tr|A6YTC9|A6YTC9_CUCME (Mitochondrial FAD carrier OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.9e-57
Identity = 121/125 (96.80%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 1   MSSDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKS 60
           MS DLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEV+AHGQQKYRYLSDVLWEAIK+
Sbjct: 1   MSFDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVRAHGQQKYRYLSDVLWEAIKN 60

Query: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACN 120
           NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYL KTGAKSIGTKANLLLAAAAGACN
Sbjct: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLEKTGAKSIGTKANLLLAAAAGACN 120

Query: 121 AILTQ 126
           AILTQ
Sbjct: 121 AILTQ 125

[Close]

BLAST of Carg12899 vs. TrEMBL
Match: tr|A0A0A0LGC2|A0A0A0LGC2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021690 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 4.2e-57
Identity = 120/125 (96.00%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 1   MSSDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKS 60
           MS DLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEV+AHGQQKYRYLSDVLWEAIK+
Sbjct: 1   MSFDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVRAHGQQKYRYLSDVLWEAIKN 60

Query: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACN 120
           NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFK+LYL KTGAKSIGTKANLLLAAAAGACN
Sbjct: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKKLYLEKTGAKSIGTKANLLLAAAAGACN 120

Query: 121 AILTQ 126
           AILTQ
Sbjct: 121 AILTQ 125

[Close]

BLAST of Carg12899 vs. TrEMBL
Match: tr|A0A061FA27|A0A061FA27_THECC (Peroxisomal adenine nucleotide carrier 1 OS=Theobroma cacao OX=3641 GN=TCM_026569 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.0e-51
Identity = 107/125 (85.60%), Postives = 118/125 (94.40%), Query Frame = 0


Query: 1   MSSDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKS 60
           M  DLESLSEATSGAIGSL+STTILYPLDTCK+KYQAEVQAHGQQKYR LSDVLWEAI +
Sbjct: 1   MGVDLESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVQAHGQQKYRNLSDVLWEAIST 60

Query: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACN 120
            Q+LSLYQGLGTKNLQSF++QF+YFYGYSYFKRLYL K+G+KSIGTKANL+LAAAAGAC 
Sbjct: 61  RQILSLYQGLGTKNLQSFIAQFVYFYGYSYFKRLYLEKSGSKSIGTKANLILAAAAGACT 120

Query: 121 AILTQ 126
           AI+TQ
Sbjct: 121 AIVTQ 125

[Close]

BLAST of Carg12899 vs. TrEMBL
Match: tr|A0A2R6RD96|A0A2R6RD96_ACTCH (Peroxisomal adenine nucleotide carrier 1 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc07827 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 4.5e-51
Identity = 107/125 (85.60%), Postives = 118/125 (94.40%), Query Frame = 0


Query: 1   MSSDLESLSEATSGAIGSLVSTTILYPLDTCKSKYQAEVQAHGQQKYRYLSDVLWEAIKS 60
           MS DLESLSEATSGAIG+L+STTILYPLDTCK+KYQAEV+AHGQQKYR LSDVLWEAI +
Sbjct: 1   MSVDLESLSEATSGAIGALLSTTILYPLDTCKTKYQAEVRAHGQQKYRNLSDVLWEAIST 60

Query: 61  NQVLSLYQGLGTKNLQSFVSQFLYFYGYSYFKRLYLAKTGAKSIGTKANLLLAAAAGACN 120
            Q+LSLYQGLGTKNLQSF+SQF+YFYGYSYFKRLYL K G+KSIGTKANL+LAAAAGAC 
Sbjct: 61  RQILSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLEKIGSKSIGTKANLVLAAAAGACT 120

Query: 121 AILTQ 126
           AI+TQ
Sbjct: 121 AIVTQ 125

The following BLAST results are available for this feature:

BLAST of Carg12899 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946759.1	2.3e-59	100.00	peroxisomal adenine nucleotide carrier 1-like [Cucurbita moschata]	[more]
XP_023545367.1	1.1e-58	99.20	peroxisomal adenine nucleotide carrier 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_008454763.1	2.8e-57	96.80	PREDICTED: peroxisomal adenine nucleotide carrier 1-like [Cucumis melo] >ABR6741...	[more]
XP_004139184.1	6.3e-57	96.00	PREDICTED: peroxisomal adenine nucleotide carrier 1-like [Cucumis sativus] >KGN6...	[more]
XP_022938110.1	1.1e-56	95.20	peroxisomal adenine nucleotide carrier 1-like [Cucurbita moschata]	[more]

BLAST of Carg12899 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05290.1	1.8e-50	78.40	peroxisomal adenine nucleotide carrier 1	[more]
AT5G27520.1	3.1e-50	79.51	peroxisomal adenine nucleotide carrier 2	[more]

BLAST of Carg12899 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9MA90\|PNC1_ARATH	3.3e-49	78.40	Peroxisomal adenine nucleotide carrier 1 OS=Arabidopsis thaliana OX=3702 GN=PNC1...	[more]
sp\|Q8VZS0\|PNC2_ARATH	5.6e-49	79.51	Peroxisomal adenine nucleotide carrier 2 OS=Arabidopsis thaliana OX=3702 GN=PNC2...	[more]
sp\|B6ZJZ9\|PNC1_SOYBN	6.2e-48	79.20	Peroxisomal adenine nucleotide carrier 1 OS=Glycine max OX=3847 GN=PNC1 PE=2 SV=...	[more]
sp\|Q76P23\|PM34_DICDI	6.9e-07	29.69	Mitochondrial substrate carrier family protein Q OS=Dictyostelium discoideum OX=...	[more]
sp\|Q06497\|ANT1_YEAST	2.2e-05	24.29	Peroxisomal adenine nucleotide transporter 1 OS=Saccharomyces cerevisiae (strain...	[more]

BLAST of Carg12899 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BYW5\|A0A1S3BYW5_CUCME	1.9e-57	96.80	peroxisomal adenine nucleotide carrier 1-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A6YTC9\|A6YTC9_CUCME	1.9e-57	96.80	Mitochondrial FAD carrier OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
tr\|A0A0A0LGC2\|A0A0A0LGC2_CUCSA	4.2e-57	96.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021690 PE=3 SV=1	[more]
tr\|A0A061FA27\|A0A061FA27_THECC	2.0e-51	85.60	Peroxisomal adenine nucleotide carrier 1 OS=Theobroma cacao OX=3641 GN=TCM_02656...	[more]
tr\|A0A2R6RD96\|A0A2R6RD96_ACTCH	4.5e-51	85.60	Peroxisomal adenine nucleotide carrier 1 like OS=Actinidia chinensis var. chinen...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023395	Mt_carrier_dom_sf
IPR018108	Mitochondrial_sb/sol_carrier

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12899-RA	Carg12899-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018108	Mitochondrial substrate/solute carrier	PFAM	PF00153	Mito_carr	coord: 5..97 e-value: 5.5E-17 score: 61.4
IPR018108	Mitochondrial substrate/solute carrier	PROSITE	PS50920	SOLCAR	coord: 5..94 score: 15.991
IPR023395	Mitochondrial carrier domain superfamily	GENE3D	G3DSA:1.50.40.10		coord: 2..126 e-value: 1.3E-20 score: 75.2
IPR023395	Mitochondrial carrier domain superfamily	SUPERFAMILY	SSF103506	Mitochondrial carrier	coord: 6..124
None	No IPR available	PANTHER	PTHR24089:SF445	SUBFAMILY NOT NAMED	coord: 7..125
None	No IPR available	PANTHER	PTHR24089	FAMILY NOT NAMED	coord: 7..125

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12899	CmaCh05G011430	Cucurbita maxima (Rimu)	carcmaB1246

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12899	Wax gourd	carwgoB1046
Carg12899	Silver-seed gourd	carcarB587
Carg12899	Cucumber (Gy14) v2	carcgybB0890
Carg12899	Cucumber (Gy14) v1	carcgyB1020
Carg12899	Cucurbita maxima (Rimu)	carcmaB1241
Carg12899	Cucurbita moschata (Rifu)	carcmoB1212
Carg12899	Cucurbita moschata (Rifu)	carcmoB1216
Carg12899	Cucurbita pepo (Zucchini)	carcpeB1252
Carg12899	Cucurbita pepo (Zucchini)	carcpeB1256
Carg12899	Wild cucumber (PI 183967)	carcpiB0938
Carg12899	Cucumber (Chinese Long) v2	carcuB0917
Carg12899	Cucumber (Chinese Long) v3	carcucB0940
Carg12899	Bottle gourd (USVL1VR-Ls)	carlsiB822
Carg12899	Melon (DHL92) v3.5.1	carmeB0893
Carg12899	Melon (DHL92) v3.6.1	carmedB0900
Carg12899	Watermelon (Charleston Gray)	carwcgB0883
Carg12899	Watermelon (97103) v1	carwmB0907
Carg12899	Watermelon (97103) v2	carwmbB0946
Carg12899	Watermelon (97103) v2	carwmbB0949