Carg12888 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12888
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	transcription factor bHLH94-like
Location	Cucurbita_argyrosperma_scaffold_043 : 988819 .. 990131 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATTAGAAGCTGTGGTTTTTTCTCAAGATCTTTACACCTCGTTTGGTGGAGGGATTTGGACAAATGGGAGCTTTCAATTTCCCCAAATCCCTCATGATTTTCCCGAGAAACAAACAGAAAATTACCCTTTTGAAGATTGGAACTCATCCTCCTCTGTTTTGCTTCCTATTCCTTCCCCTGAAGAACCTGCCATTTCCAGAAATCCGCCATTGGAGGCTGAATCAAGAACTCCAAACCCAATTCGACCCAGAAAACGACGACCCAAATCCCGCAAGAACAAGGAAGATATCGAGAATCAGAGAATGACCCACATCGCTGTTGAACGAAATCGACGAAAACAGATGAATGAGTATCTCTCTGTTCTTAGATCCTTAATGCCAGAGTCTTATGTTCAAAGGGTATCTCTCTCTTCCTCTGTTCTTCATTTTCCTTCTTCCAAACAGAAATTAAATGGGTTTTTTTGTTGTTGTTTTCAGGGGGATCAAGCTTCAATTATTGGGGGAGCTATTAATTTTGTGAAGGAGCTTGAGCAACAAGTTCAAGTTCTATCAACAATGGAAACAAAAACAAAGGGCTGTTCTTCATCAAAGCCCCCTTTTTCTGAGTTCTTCACCTTCCCTCAGTTCAAATCAATGGAGGGTTGTTGTTCATTGGGTGAAAACGAAACCCAATGTTCTTCCATTGCTGATATTGAAGTAACAATGGTGGAAAATCATGCAAATTTGAAAATCAGGTCAAAGAGAAGGCCAAAACAAGCCTTGAAAATCGTTGCTGGCTTGCATTCTCTTTGCCTCTCTGTTCTTCATCTCAATATCTCTACCATAAACCAAATTGTTCTTTACTGTCTGAGCGTGAAGGTCAGTTCTTGAGCTCTTATTCTGAAATGGGTATCAGTTTTTTCATTTGAAAAAGGGTTTTGGAATGGATTCATTGCAGGTTGAAGATGATTGCAAGCTGAATTCTGTCGATGAAATTGCATCTGCTCTGCATCAGTTGCTTTGTAGAATCGAAGAAGAATCAGTGATGAACTGAAGTTTTTGTTTATGGGTTTAGATTGTAATCTTGTTCTAACTAATGGAATCTCTGTTGTTTATGTTGAATCTTTGAGGAATTTCATCTGGGTTTTGAGCTCTGTTCTTCATATTCTTGTTAAAAAGTAATGCTTTTTGTGATCTAAGATTGAAAAAGGTTAAAAGATTTATGATGACCAATGAGTTGAGAAGATGTGGTTTGAAAGATGAGTTTGGTAGCAGAAAGTTGTGTCCTTGAGTGCATGGGCAGTTTTAGAAGTGCTCAGCTCTGTTTCTGC

mRNA sequence

ATGGCATTAGAAGCTGTGGTTTTTTCTCAAGATCTTTACACCTCGTTTGGTGGAGGGATTTGGACAAATGGGAGCTTTCAATTTCCCCAAATCCCTCATGATTTTCCCGAGAAACAAACAGAAAATTACCCTTTTGAAGATTGGAACTCATCCTCCTCTGTTTTGCTTCCTATTCCTTCCCCTGAAGAACCTGCCATTTCCAGAAATCCGCCATTGGAGGCTGAATCAAGAACTCCAAACCCAATTCGACCCAGAAAACGACGACCCAAATCCCGCAAGAACAAGGAAGATATCGAGAATCAGAGAATGACCCACATCGCTGTTGAACGAAATCGACGAAAACAGATGAATGAGTATCTCTCTGTTCTTAGATCCTTAATGCCAGAGTCTTATGTTCAAAGGGGGGATCAAGCTTCAATTATTGGGGGAGCTATTAATTTTGTGAAGGAGCTTGAGCAACAAGTTCAAGTTCTATCAACAATGGAAACAAAAACAAAGGGCTGTTCTTCATCAAAGCCCCCTTTTTCTGAGTTCTTCACCTTCCCTCAGTTCAAATCAATGGAGGGTTGTTGTTCATTGGGTGAAAACGAAACCCAATGTTCTTCCATTGCTGATATTGAAGTAACAATGGTGGAAAATCATGCAAATTTGAAAATCAGGTCAAAGAGAAGGCCAAAACAAGCCTTGAAAATCGTTGCTGGCTTGCATTCTCTTTGCCTCTCTGTTCTTCATCTCAATATCTCTACCATAAACCAAATTGTTCTTTACTGTCTGAGCGTGAAGGTTGAAGATGATTGCAAGCTGAATTCTGTCGATGAAATTGCATCTGCTCTGCATCAGTTGCTTTGTAGAATCGAAGAAGAATCAGTGATGAACTGAAGTTTTTGTTTATGGGTTTAGATTGTAATCTTGTTCTAACTAATGGAATCTCTGTTGTTTATGTTGAATCTTTGAGGAATTTCATCTGGGTTTTGAGCTCTGTTCTTCATATTCTTGTTAAAAAGTAATGCTTTTTGTGATCTAAGATTGAAAAAGGTTAAAAGATTTATGATGACCAATGAGTTGAGAAGATGTGGTTTGAAAGATGAGTTTGGTAGCAGAAAGTTGTGTCCTTGAGTGCATGGGCAGTTTTAGAAGTGCTCAGCTCTGTTTCTGC

Coding sequence (CDS)

ATGGCATTAGAAGCTGTGGTTTTTTCTCAAGATCTTTACACCTCGTTTGGTGGAGGGATTTGGACAAATGGGAGCTTTCAATTTCCCCAAATCCCTCATGATTTTCCCGAGAAACAAACAGAAAATTACCCTTTTGAAGATTGGAACTCATCCTCCTCTGTTTTGCTTCCTATTCCTTCCCCTGAAGAACCTGCCATTTCCAGAAATCCGCCATTGGAGGCTGAATCAAGAACTCCAAACCCAATTCGACCCAGAAAACGACGACCCAAATCCCGCAAGAACAAGGAAGATATCGAGAATCAGAGAATGACCCACATCGCTGTTGAACGAAATCGACGAAAACAGATGAATGAGTATCTCTCTGTTCTTAGATCCTTAATGCCAGAGTCTTATGTTCAAAGGGGGGATCAAGCTTCAATTATTGGGGGAGCTATTAATTTTGTGAAGGAGCTTGAGCAACAAGTTCAAGTTCTATCAACAATGGAAACAAAAACAAAGGGCTGTTCTTCATCAAAGCCCCCTTTTTCTGAGTTCTTCACCTTCCCTCAGTTCAAATCAATGGAGGGTTGTTGTTCATTGGGTGAAAACGAAACCCAATGTTCTTCCATTGCTGATATTGAAGTAACAATGGTGGAAAATCATGCAAATTTGAAAATCAGGTCAAAGAGAAGGCCAAAACAAGCCTTGAAAATCGTTGCTGGCTTGCATTCTCTTTGCCTCTCTGTTCTTCATCTCAATATCTCTACCATAAACCAAATTGTTCTTTACTGTCTGAGCGTGAAGGTTGAAGATGATTGCAAGCTGAATTCTGTCGATGAAATTGCATCTGCTCTGCATCAGTTGCTTTGTAGAATCGAAGAAGAATCAGTGATGAACTGA

Protein sequence

MALEAVVFSQDLYTSFGGGIWTNGSFQFPQIPHDFPEKQTENYPFEDWNSSSSVLLPIPSPEEPAISRNPPLEAESRTPNPIRPRKRRPKSRKNKEDIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTMETKTKGCSSSKPPFSEFFTFPQFKSMEGCCSLGENETQCSSIADIEVTMVENHANLKIRSKRRPKQALKIVAGLHSLCLSVLHLNISTINQIVLYCLSVKVEDDCKLNSVDEIASALHQLLCRIEEESVMN

Homology

[Close]

BLAST of Carg12888 vs. NCBI nr
Match: XP_022946286.1 (transcription factor bHLH94-like isoform X2 [Cucurbita moschata] >XP_023521809.1 transcription factor bHLH94-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023546564.1 transcription factor bHLH94-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 571.6 bits (1472), Expect = 1.5e-159
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0


Query: 1   MALEAVVFSQDLYTSFGGGIWTNGSFQFPQIPHDFPEKQTENYPFEDWNSSSSVLLPIPS 60
           MALEAVVFSQDLYTSFGGGIWTNGSFQFPQIPHDFPEKQTENYPFEDWNSSSSVLLPIPS
Sbjct: 1   MALEAVVFSQDLYTSFGGGIWTNGSFQFPQIPHDFPEKQTENYPFEDWNSSSSVLLPIPS 60

Query: 61  PEEPAISRNPPLEAESRTPNPIRPRKRRPKSRKNKEDIENQRMTHIAVERNRRKQMNEYL 120
           PEEPAISRNPPLEAESRTPNPIRPRKRRPKSRKNKEDIENQRMTHIAVERNRRKQMNEYL
Sbjct: 61  PEEPAISRNPPLEAESRTPNPIRPRKRRPKSRKNKEDIENQRMTHIAVERNRRKQMNEYL 120

Query: 121 SVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTMETKTKGCSSSKPPFSEFFT 180
           SVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTMETKTKGCSSSKPPFSEFFT
Sbjct: 121 SVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTMETKTKGCSSSKPPFSEFFT 180

Query: 181 FPQFKSMEGCCSLGENETQCSSIADIEVTMVENHANLKIRSKRRPKQALKIVAGLHSLCL 240
           FPQFKSMEGCCSLGENETQCSSIADIEVTMVENHANLKIRSKRRPKQALKIVAGLHSLCL
Sbjct: 181 FPQFKSMEGCCSLGENETQCSSIADIEVTMVENHANLKIRSKRRPKQALKIVAGLHSLCL 240

Query: 241 SVLHLNISTINQIVLYCLSVKVEDDCKLNSVDEIASALHQLLCRIEEESVMN 293
           SVLHLNISTINQIVLYCLSVKVEDDCKLNSVDEIASALHQLLCRIEEESVMN
Sbjct: 241 SVLHLNISTINQIVLYCLSVKVEDDCKLNSVDEIASALHQLLCRIEEESVMN 292

[Close]

BLAST of Carg12888 vs. NCBI nr
Match: XP_022999125.1 (transcription factor bHLH94-like [Cucurbita maxima])

HSP 1 Score: 566.2 bits (1458), Expect = 6.3e-158
Identity = 289/292 (98.97%), Postives = 290/292 (99.32%), Query Frame = 0


Query: 1   MALEAVVFSQDLYTSFGGGIWTNGSFQFPQIPHDFPEKQTENYPFEDWNSSSSVLLPIPS 60
           MALEAVVFSQDLYTSFGGGIWTNGSFQFPQIPHDFPEKQTEN+PFEDWNSSSSV LPIPS
Sbjct: 1   MALEAVVFSQDLYTSFGGGIWTNGSFQFPQIPHDFPEKQTENFPFEDWNSSSSVFLPIPS 60

Query: 61  PEEPAISRNPPLEAESRTPNPIRPRKRRPKSRKNKEDIENQRMTHIAVERNRRKQMNEYL 120
           PEEPAISRNPPLEAESRTPNPIRPRKRRPKSRKNKEDIENQRMTHIAVERNRRKQMNEYL
Sbjct: 61  PEEPAISRNPPLEAESRTPNPIRPRKRRPKSRKNKEDIENQRMTHIAVERNRRKQMNEYL 120

Query: 121 SVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTMETKTKGCSSSKPPFSEFFT 180
           SVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTME KTKGCSSSKPPFSEFFT
Sbjct: 121 SVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTMEIKTKGCSSSKPPFSEFFT 180

Query: 181 FPQFKSMEGCCSLGENETQCSSIADIEVTMVENHANLKIRSKRRPKQALKIVAGLHSLCL 240
           FPQFKSMEGCCSLGENETQCSSIADIEVTMVENHANLKIRSKRRPKQALKIVAGLHSLCL
Sbjct: 181 FPQFKSMEGCCSLGENETQCSSIADIEVTMVENHANLKIRSKRRPKQALKIVAGLHSLCL 240

Query: 241 SVLHLNISTINQIVLYCLSVKVEDDCKLNSVDEIASALHQLLCRIEEESVMN 293
           SVLHLNISTINQIVLYCLSVKVEDDCKLNSVDEIASALHQLLCRIEEESVMN
Sbjct: 241 SVLHLNISTINQIVLYCLSVKVEDDCKLNSVDEIASALHQLLCRIEEESVMN 292

[Close]

BLAST of Carg12888 vs. NCBI nr
Match: XP_022946285.1 (transcription factor bHLH94-like isoform X1 [Cucurbita moschata] >XP_023521808.1 transcription factor bHLH94-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546563.1 transcription factor bHLH94-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 564.3 bits (1453), Expect = 2.4e-157
Identity = 292/300 (97.33%), Postives = 292/300 (97.33%), Query Frame = 0


Query: 1   MALEAVVFSQDLYTSFGGGIWTNGSFQFPQIPHDFPEKQTENYPFEDWNSSSSVLLPIPS 60
           MALEAVVFSQDLYTSFGGGIWTNGSFQFPQIPHDFPEKQTENYPFEDWNSSSSVLLPIPS
Sbjct: 1   MALEAVVFSQDLYTSFGGGIWTNGSFQFPQIPHDFPEKQTENYPFEDWNSSSSVLLPIPS 60

Query: 61  PEEPAISRNPPLEAESRTPNPIRPRKRRPKSRKNKEDIENQRMTHIAVERNRRKQMNEYL 120
           PEEPAISRNPPLEAESRTPNPIRPRKRRPKSRKNKEDIENQRMTHIAVERNRRKQMNEYL
Sbjct: 61  PEEPAISRNPPLEAESRTPNPIRPRKRRPKSRKNKEDIENQRMTHIAVERNRRKQMNEYL 120

Query: 121 SVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTMETKTKGCSSSKPPFSEFFT 180
           SVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTMETKTKGCSSSKPPFSEFFT
Sbjct: 121 SVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTMETKTKGCSSSKPPFSEFFT 180

Query: 181 FPQFKSMEGCCSLGENETQCSSIADIEVTMVENHANLKIRSKRRPKQALKIVAGLHSLCL 240
           FPQFKSMEGCCSLGENETQCSSIADIEVTMVENHANLKIRSKRRPKQALKIVAGLHSLCL
Sbjct: 181 FPQFKSMEGCCSLGENETQCSSIADIEVTMVENHANLKIRSKRRPKQALKIVAGLHSLCL 240

Query: 241 SVLHLNISTINQIVLYCLSVK--------VEDDCKLNSVDEIASALHQLLCRIEEESVMN 293
           SVLHLNISTINQIVLYCLSVK        VEDDCKLNSVDEIASALHQLLCRIEEESVMN
Sbjct: 241 SVLHLNISTINQIVLYCLSVKGFGMDSLQVEDDCKLNSVDEIASALHQLLCRIEEESVMN 300

[Close]

BLAST of Carg12888 vs. NCBI nr
Match: XP_008454918.1 (PREDICTED: transcription factor bHLH94-like [Cucumis melo])

HSP 1 Score: 428.7 bits (1101), Expect = 1.6e-116
Identity = 241/318 (75.79%), Postives = 259/318 (81.45%), Query Frame = 0


Query: 1   MALEAVVFSQ---------DLYTSFGGGIWTNGSFQFPQIPHDFPEKQTENYPFEDWNSS 60
           MALEAVVFSQ         DLY+  GGGIW NGSF++P+IPHDFPE QTEN+PFEDWNSS
Sbjct: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGSFEYPEIPHDFPENQTENFPFEDWNSS 60

Query: 61  SSVLLPIPSPEEPAISRN----PPLEAESRTPNPIRPRKRRPKSRKNKEDIENQRMTHIA 120
           SSV +P PSP E A SRN    PPLEAES TP+P               +IENQRMTHIA
Sbjct: 61  SSVFVPNPSP-EAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIA 120

Query: 121 VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTMETKTK- 180
           VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLST+ETK K 
Sbjct: 121 VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTIETKGKI 180

Query: 181 -----GC------SSSKPPFSEFFTFPQFKSMEGCCSLGENETQCSS-IADIEVTMVENH 240
                GC      S+SK PF+EFF+FPQFK+MEGC  + ENETQCSS +ADIEVTMVENH
Sbjct: 181 NNSAEGCCNSNSNSNSKIPFAEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENH 240

Query: 241 ANLKIRSKRRPKQALKIVAGLHSLCLSVLHLNISTINQIVLYCLSVKVEDDCKLNSVDEI 293
           ANLKIRSKRRPKQ LKIVAGLHSL LSVLHLNISTINQIVLYCLSVKVEDDCKL+SVDEI
Sbjct: 241 ANLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVEDDCKLSSVDEI 300

[Close]

BLAST of Carg12888 vs. NCBI nr
Match: XP_004139191.1 (PREDICTED: transcription factor bHLH94-like [Cucumis sativus] >KGN60884.1 Helix-loop-helix-like protein [Cucumis sativus])

HSP 1 Score: 427.2 bits (1097), Expect = 4.6e-116
Identity = 240/318 (75.47%), Postives = 258/318 (81.13%), Query Frame = 0


Query: 1   MALEAVVFSQ---------DLYTSFGGGIWTNGSFQFPQIPHDFPEKQTENYPFEDWNSS 60
           MALEAVVFSQ         DLY+  GGGIW NG F++P+IPHDFPE QTEN+PFEDWNSS
Sbjct: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGGFEYPEIPHDFPENQTENFPFEDWNSS 60

Query: 61  SSVLLPIPSPEEPAISRN----PPLEAESRTPNPIRPRKRRPKSRKNKEDIENQRMTHIA 120
           SSV +P PSP E A SRN    PPLEAES TP+P               +IENQRMTHIA
Sbjct: 61  SSVFVPNPSP-EAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIA 120

Query: 121 VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTMETKTK- 180
           VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLST+ETK K 
Sbjct: 121 VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTVETKGKI 180

Query: 181 -----GC------SSSKPPFSEFFTFPQFKSMEGCCSLGENETQCSS-IADIEVTMVENH 240
                GC      S+SK PF+EFF+FPQFK+MEGC  + ENETQCSS +ADIEVTMVENH
Sbjct: 181 NNSAEGCCNSNSNSNSKIPFTEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENH 240

Query: 241 ANLKIRSKRRPKQALKIVAGLHSLCLSVLHLNISTINQIVLYCLSVKVEDDCKLNSVDEI 293
           ANLKIRSKRRPKQ LKIVAGLHSL LSVLHLNISTINQIVLYCLSVKVEDDCKL+SVDEI
Sbjct: 241 ANLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVEDDCKLSSVDEI 300

[Close]

BLAST of Carg12888 vs. TAIR10
Match: AT1G22490.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 206.8 bits (525), Expect = 1.8e-53
Identity = 138/315 (43.81%), Postives = 192/315 (60.95%), Query Frame = 0


Query: 1   MALEAVVFSQDLYTSFGGGIWTNGSFQFPQI--PHDFPEKQTEN---------------- 60
           M LEAVV+ QD +    G +     F F  +    +F  + T+N                
Sbjct: 1   MPLEAVVYPQDPF----GYLSNCKDFMFHDLYSQEEFVAQDTKNNIDKLGHEQSFVEQGK 60

Query: 61  YPFEDWNSSSSVLLPIPS-PEEPAISRNPPLEAESRTPNPIRPRKRRPKSRKNKEDIENQ 120
                W       L IPS  EE  ++    ++ ES             ++ KNKE+IENQ
Sbjct: 61  EDDHQWRDYHQYPLLIPSLGEELGLT---AIDVESHPXXXXXXXXXXXRNCKNKEEIENQ 120

Query: 121 RMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTM 180
           RMTHIAVERNRRKQMNEYL+VLRSLMP SY QRGDQASI+GGAIN+VKELE  +Q +   
Sbjct: 121 RMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPK 180

Query: 181 ETKT---KG----CSSSKPPFSEFFTFPQFKSMEGCCSLGENETQCSSIADIEVTMVENH 240
            T+T   KG     SS   PF++FF+FPQ+ +     S  +     SS A+IEVT+ E+H
Sbjct: 181 RTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTK----SSSDVPESSSSPAEIEVTVAESH 240

Query: 241 ANLKIRSKRRPKQALKIVAGLHSLCLSVLHLNISTINQIVLYCLSVKVEDDCKLNSVDEI 290
           AN+KI +K++P+Q LK++  L SL L++LHLN++T++  +LY +SV+VE+  +LN+VD+I
Sbjct: 241 ANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEGSQLNTVDDI 300

[Close]

BLAST of Carg12888 vs. TAIR10
Match: AT1G72210.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 203.0 bits (515), Expect = 2.5e-52
Identity = 114/205 (55.61%), Postives = 150/205 (73.17%), Query Frame = 0


Query: 98  IENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQV 157
           IENQRMTHIAVERNRRKQMNEYL+VLRSLMP  Y QRGDQASI+GGAIN++KELE  +Q 
Sbjct: 120 IENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQS 179

Query: 158 LSTM-------------ETKTKGCSSSKPPFSEFFTFPQFKSMEGCCSLGENETQCSSIA 217
           +                +TKT   SSS  PFS+FF FPQ+ +     +  E       +A
Sbjct: 180 MEPPVKTATEDTGAGHDQTKTTSASSS-GPFSDFFAFPQYSNRPTSAAAAE------GMA 239

Query: 218 DIEVTMVENHANLKIRSKRRPKQALKIVAGLHSLCLSVLHLNISTINQIVLYCLSVKVED 277
           +IEVTMVE+HA+LKI +K+RP+Q LK+V+ + SL L++LHLN++T +  VLY +SVKVE+
Sbjct: 240 EIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISVKVEE 299

Query: 278 DCKLNSVDEIASALHQLLCRIEEES 290
             +LN+V++IA+A++Q+L RIEEES
Sbjct: 300 GSQLNTVEDIAAAVNQILRRIEEES 317

[Close]

BLAST of Carg12888 vs. TAIR10
Match: AT5G46690.1 (beta HLH protein 71)

HSP 1 Score: 162.5 bits (410), Expect = 3.8e-40
Identity = 97/221 (43.89%), Postives = 134/221 (60.63%), Query Frame = 0


Query: 99  ENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVL 158
           ENQRMTHIAVERNRR+QMN++LSVLRSLMP+ +  +GDQASI+GGAI+F+KELE ++  L
Sbjct: 84  ENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSL 143

Query: 159 S-------------TMETKTKGCSSSKPP-------FSEFFTFPQFKSMEGCCSLGENET 218
                         T  T        + P        S+FF      S E     G   +
Sbjct: 144 EAQKHHNAKLNQSVTSSTSQDSNGEQENPHQPSSLSLSQFFLHSYDPSQEN--RNGSTSS 203

Query: 219 QCSSIADIEVTMVENHANLKIRSKRR-----------PKQALKIVAGLHSLCLSVLHLNI 278
             + + D+EVT++E HAN++I S+RR           P Q  K+VA L SL LS+LHL++
Sbjct: 204 VKTPMEDLEVTLIETHANIRILSRRRGFRWSTLATTKPPQLSKLVASLQSLSLSILHLSV 263

Query: 279 STINQIVLYCLSVKVEDDCKLNSVDEIASALHQLLCRIEEE 289
           +T++   +Y +S KVE+ C+L+SVD+IA A+H +L  IEEE
Sbjct: 264 TTLDNYAIYSISAKVEESCQLSSVDDIAGAVHHMLSIIEEE 302

[Close]

BLAST of Carg12888 vs. TAIR10
Match: AT5G65320.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-39
Identity = 98/213 (46.01%), Postives = 134/213 (62.91%), Query Frame = 0


Query: 85  RKRRPKSRKNKEDIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGA 144
           RKRR +S K   D ENQRM HIAVERNRRKQMN +LS+L+S+MP SY Q  DQASII G 
Sbjct: 84  RKRRRRSEKTIVDKENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGT 143

Query: 145 INFVKELEQQVQVLSTMETKTKGCSSSKPPFSEFFTFPQFK--------SMEGCCSLGEN 204
           I+++K+LEQ++Q L      TK  + S   FS+FF FPQ+                    
Sbjct: 144 ISYLKKLEQRLQSLEAQLKATK-LNQSPNIFSDFFMFPQYSXXXXXXXXXXXXXXXXXXX 203

Query: 205 ETQCSSIADIEVTMVENHANLKIRSKRRPKQALKIVAGLHSLCLSVLHLNISTINQIVLY 264
                  AD+EVTMVE HAN+K+ +K +P+   KI+   +SL LS LHLN++T   + L+
Sbjct: 204 XXXXXXXADVEVTMVERHANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLF 263

Query: 265 CLSVKVEDDCKLN-SVDEIASALHQLLCRIEEE 289
             SVKVE DC+L  S +E+A+ +H+++ R+ +E
Sbjct: 264 TFSVKVEADCQLTPSGNEVANTVHEVVRRVHKE 295

[Close]

BLAST of Carg12888 vs. TAIR10
Match: AT3G61950.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 146.0 bits (367), Expect = 3.7e-35
Identity = 97/227 (42.73%), Postives = 146/227 (64.32%), Query Frame = 0


Query: 67  SRNPPLEAESRTP---NPIRPRKRRPKSR--------KNKEDIENQRMTHIAVERNRRKQ 126
           S + PL A SR     N + P++   + R        KN E+IENQR+ HIAVERNRR+Q
Sbjct: 131 STSSPLSAHSRRKRKINHLLPQEMTREKRXXXXXXXSKNNEEIENQRINHIAVERNRRRQ 190

Query: 127 MNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTMETKTKGCSSSKPPF 186
           MNE+++ LR+L+P SY+QRGDQASI+GGAIN+VK LEQ +Q L + + +T+  S+S+   
Sbjct: 191 MNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLES-QKRTQQQSNSEVVE 250

Query: 187 SEFFTFPQFKSMEGCCSLGENETQCSSIADIEVTMVENHANLKIRSKRRPKQALKIVAGL 246
           +         S +   +L E++T    I  IE T+++NH +LK++ +++  Q LK +  L
Sbjct: 251 NALNHLSGISSNDLWTTL-EDQT---CIPKIEATVIQNHVSLKVQCEKKQGQLLKGIISL 310

Query: 247 HSLCLSVLHLNIST-INQIVLYCLSVKVEDDCKLNSVDEIASALHQL 282
             L L+VLHLNI+T  +  V Y  ++K+ED+C L S DEI +A+H++
Sbjct: 311 EKLKLTVLHLNITTSSHSSVSYSFNLKMEDECDLESADEITAAVHRI 352

[Close]

BLAST of Carg12888 vs. Swiss-Prot
Match: sp|Q9SK91|BH094_ARATH (Transcription factor bHLH94 OS=Arabidopsis thaliana OX=3702 GN=BHLH94 PE=1 SV=2)

HSP 1 Score: 206.8 bits (525), Expect = 3.2e-52
Identity = 138/315 (43.81%), Postives = 192/315 (60.95%), Query Frame = 0


Query: 1   MALEAVVFSQDLYTSFGGGIWTNGSFQFPQI--PHDFPEKQTEN---------------- 60
           M LEAVV+ QD +    G +     F F  +    +F  + T+N                
Sbjct: 1   MPLEAVVYPQDPF----GYLSNCKDFMFHDLYSQEEFVAQDTKNNIDKLGHEQSFVEQGK 60

Query: 61  YPFEDWNSSSSVLLPIPS-PEEPAISRNPPLEAESRTPNPIRPRKRRPKSRKNKEDIENQ 120
                W       L IPS  EE  ++    ++ ES             ++ KNKE+IENQ
Sbjct: 61  EDDHQWRDYHQYPLLIPSLGEELGLT---AIDVESHPXXXXXXXXXXXRNCKNKEEIENQ 120

Query: 121 RMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTM 180
           RMTHIAVERNRRKQMNEYL+VLRSLMP SY QRGDQASI+GGAIN+VKELE  +Q +   
Sbjct: 121 RMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPK 180

Query: 181 ETKT---KG----CSSSKPPFSEFFTFPQFKSMEGCCSLGENETQCSSIADIEVTMVENH 240
            T+T   KG     SS   PF++FF+FPQ+ +     S  +     SS A+IEVT+ E+H
Sbjct: 181 RTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTK----SSSDVPESSSSPAEIEVTVAESH 240

Query: 241 ANLKIRSKRRPKQALKIVAGLHSLCLSVLHLNISTINQIVLYCLSVKVEDDCKLNSVDEI 290
           AN+KI +K++P+Q LK++  L SL L++LHLN++T++  +LY +SV+VE+  +LN+VD+I
Sbjct: 241 ANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEGSQLNTVDDI 300

[Close]

BLAST of Carg12888 vs. Swiss-Prot
Match: sp|Q9C7T4|BH096_ARATH (Transcription factor bHLH96 OS=Arabidopsis thaliana OX=3702 GN=BHLH96 PE=1 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 4.6e-51
Identity = 114/205 (55.61%), Postives = 150/205 (73.17%), Query Frame = 0


Query: 98  IENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQV 157
           IENQRMTHIAVERNRRKQMNEYL+VLRSLMP  Y QRGDQASI+GGAIN++KELE  +Q 
Sbjct: 120 IENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQS 179

Query: 158 LSTM-------------ETKTKGCSSSKPPFSEFFTFPQFKSMEGCCSLGENETQCSSIA 217
           +                +TKT   SSS  PFS+FF FPQ+ +     +  E       +A
Sbjct: 180 MEPPVKTATEDTGAGHDQTKTTSASSS-GPFSDFFAFPQYSNRPTSAAAAE------GMA 239

Query: 218 DIEVTMVENHANLKIRSKRRPKQALKIVAGLHSLCLSVLHLNISTINQIVLYCLSVKVED 277
           +IEVTMVE+HA+LKI +K+RP+Q LK+V+ + SL L++LHLN++T +  VLY +SVKVE+
Sbjct: 240 EIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISVKVEE 299

Query: 278 DCKLNSVDEIASALHQLLCRIEEES 290
             +LN+V++IA+A++Q+L RIEEES
Sbjct: 300 GSQLNTVEDIAAAVNQILRRIEEES 317

[Close]

BLAST of Carg12888 vs. Swiss-Prot
Match: sp|Q56XR0|BH071_ARATH (Transcription factor bHLH71 OS=Arabidopsis thaliana OX=3702 GN=BHLH71 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 6.9e-39
Identity = 97/221 (43.89%), Postives = 134/221 (60.63%), Query Frame = 0


Query: 99  ENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVL 158
           ENQRMTHIAVERNRR+QMN++LSVLRSLMP+ +  +GDQASI+GGAI+F+KELE ++  L
Sbjct: 84  ENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSL 143

Query: 159 S-------------TMETKTKGCSSSKPP-------FSEFFTFPQFKSMEGCCSLGENET 218
                         T  T        + P        S+FF      S E     G   +
Sbjct: 144 EAQKHHNAKLNQSVTSSTSQDSNGEQENPHQPSSLSLSQFFLHSYDPSQEN--RNGSTSS 203

Query: 219 QCSSIADIEVTMVENHANLKIRSKRR-----------PKQALKIVAGLHSLCLSVLHLNI 278
             + + D+EVT++E HAN++I S+RR           P Q  K+VA L SL LS+LHL++
Sbjct: 204 VKTPMEDLEVTLIETHANIRILSRRRGFRWSTLATTKPPQLSKLVASLQSLSLSILHLSV 263

Query: 279 STINQIVLYCLSVKVEDDCKLNSVDEIASALHQLLCRIEEE 289
           +T++   +Y +S KVE+ C+L+SVD+IA A+H +L  IEEE
Sbjct: 264 TTLDNYAIYSISAKVEESCQLSSVDDIAGAVHHMLSIIEEE 302

[Close]

BLAST of Carg12888 vs. Swiss-Prot
Match: sp|Q9FKQ6|BH099_ARATH (Transcription factor bHLH99 OS=Arabidopsis thaliana OX=3702 GN=BHLH99 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.0e-38
Identity = 98/213 (46.01%), Postives = 134/213 (62.91%), Query Frame = 0


Query: 85  RKRRPKSRKNKEDIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGA 144
           RKRR +S K   D ENQRM HIAVERNRRKQMN +LS+L+S+MP SY Q  DQASII G 
Sbjct: 84  RKRRRRSEKTIVDKENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGT 143

Query: 145 INFVKELEQQVQVLSTMETKTKGCSSSKPPFSEFFTFPQFK--------SMEGCCSLGEN 204
           I+++K+LEQ++Q L      TK  + S   FS+FF FPQ+                    
Sbjct: 144 ISYLKKLEQRLQSLEAQLKATK-LNQSPNIFSDFFMFPQYSXXXXXXXXXXXXXXXXXXX 203

Query: 205 ETQCSSIADIEVTMVENHANLKIRSKRRPKQALKIVAGLHSLCLSVLHLNISTINQIVLY 264
                  AD+EVTMVE HAN+K+ +K +P+   KI+   +SL LS LHLN++T   + L+
Sbjct: 204 XXXXXXXADVEVTMVERHANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLF 263

Query: 265 CLSVKVEDDCKLN-SVDEIASALHQLLCRIEEE 289
             SVKVE DC+L  S +E+A+ +H+++ R+ +E
Sbjct: 264 TFSVKVEADCQLTPSGNEVANTVHEVVRRVHKE 295

[Close]

BLAST of Carg12888 vs. Swiss-Prot
Match: sp|Q700E4|BH067_ARATH (Transcription factor bHLH67 OS=Arabidopsis thaliana OX=3702 GN=BHLH67 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 6.7e-34
Identity = 97/227 (42.73%), Postives = 146/227 (64.32%), Query Frame = 0


Query: 67  SRNPPLEAESRTP---NPIRPRKRRPKSR--------KNKEDIENQRMTHIAVERNRRKQ 126
           S + PL A SR     N + P++   + R        KN E+IENQR+ HIAVERNRR+Q
Sbjct: 131 STSSPLSAHSRRKRKINHLLPQEMTREKRXXXXXXXSKNNEEIENQRINHIAVERNRRRQ 190

Query: 127 MNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTMETKTKGCSSSKPPF 186
           MNE+++ LR+L+P SY+QRGDQASI+GGAIN+VK LEQ +Q L + + +T+  S+S+   
Sbjct: 191 MNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLES-QKRTQQQSNSEVVE 250

Query: 187 SEFFTFPQFKSMEGCCSLGENETQCSSIADIEVTMVENHANLKIRSKRRPKQALKIVAGL 246
           +         S +   +L E++T    I  IE T+++NH +LK++ +++  Q LK +  L
Sbjct: 251 NALNHLSGISSNDLWTTL-EDQT---CIPKIEATVIQNHVSLKVQCEKKQGQLLKGIISL 310

Query: 247 HSLCLSVLHLNIST-INQIVLYCLSVKVEDDCKLNSVDEIASALHQL 282
             L L+VLHLNI+T  +  V Y  ++K+ED+C L S DEI +A+H++
Sbjct: 311 EKLKLTVLHLNITTSSHSSVSYSFNLKMEDECDLESADEITAAVHRI 352

[Close]

BLAST of Carg12888 vs. TrEMBL
Match: tr|A0A1S3C0F1|A0A1S3C0F1_CUCME (transcription factor bHLH94-like OS=Cucumis melo OX=3656 GN=LOC103495217 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.0e-116
Identity = 241/318 (75.79%), Postives = 259/318 (81.45%), Query Frame = 0


Query: 1   MALEAVVFSQ---------DLYTSFGGGIWTNGSFQFPQIPHDFPEKQTENYPFEDWNSS 60
           MALEAVVFSQ         DLY+  GGGIW NGSF++P+IPHDFPE QTEN+PFEDWNSS
Sbjct: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGSFEYPEIPHDFPENQTENFPFEDWNSS 60

Query: 61  SSVLLPIPSPEEPAISRN----PPLEAESRTPNPIRPRKRRPKSRKNKEDIENQRMTHIA 120
           SSV +P PSP E A SRN    PPLEAES TP+P               +IENQRMTHIA
Sbjct: 61  SSVFVPNPSP-EAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIA 120

Query: 121 VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTMETKTK- 180
           VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLST+ETK K 
Sbjct: 121 VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTIETKGKI 180

Query: 181 -----GC------SSSKPPFSEFFTFPQFKSMEGCCSLGENETQCSS-IADIEVTMVENH 240
                GC      S+SK PF+EFF+FPQFK+MEGC  + ENETQCSS +ADIEVTMVENH
Sbjct: 181 NNSAEGCCNSNSNSNSKIPFAEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENH 240

Query: 241 ANLKIRSKRRPKQALKIVAGLHSLCLSVLHLNISTINQIVLYCLSVKVEDDCKLNSVDEI 293
           ANLKIRSKRRPKQ LKIVAGLHSL LSVLHLNISTINQIVLYCLSVKVEDDCKL+SVDEI
Sbjct: 241 ANLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVEDDCKLSSVDEI 300

[Close]

BLAST of Carg12888 vs. TrEMBL
Match: tr|A0A0A0LIK9|A0A0A0LIK9_CUCSA (Helix-loop-helix-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G021550 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 3.0e-116
Identity = 240/318 (75.47%), Postives = 258/318 (81.13%), Query Frame = 0


Query: 1   MALEAVVFSQ---------DLYTSFGGGIWTNGSFQFPQIPHDFPEKQTENYPFEDWNSS 60
           MALEAVVFSQ         DLY+  GGGIW NG F++P+IPHDFPE QTEN+PFEDWNSS
Sbjct: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGGFEYPEIPHDFPENQTENFPFEDWNSS 60

Query: 61  SSVLLPIPSPEEPAISRN----PPLEAESRTPNPIRPRKRRPKSRKNKEDIENQRMTHIA 120
           SSV +P PSP E A SRN    PPLEAES TP+P               +IENQRMTHIA
Sbjct: 61  SSVFVPNPSP-EAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIA 120

Query: 121 VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTMETKTK- 180
           VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLST+ETK K 
Sbjct: 121 VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTVETKGKI 180

Query: 181 -----GC------SSSKPPFSEFFTFPQFKSMEGCCSLGENETQCSS-IADIEVTMVENH 240
                GC      S+SK PF+EFF+FPQFK+MEGC  + ENETQCSS +ADIEVTMVENH
Sbjct: 181 NNSAEGCCNSNSNSNSKIPFTEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENH 240

Query: 241 ANLKIRSKRRPKQALKIVAGLHSLCLSVLHLNISTINQIVLYCLSVKVEDDCKLNSVDEI 293
           ANLKIRSKRRPKQ LKIVAGLHSL LSVLHLNISTINQIVLYCLSVKVEDDCKL+SVDEI
Sbjct: 241 ANLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKVEDDCKLSSVDEI 300

[Close]

BLAST of Carg12888 vs. TrEMBL
Match: tr|Q84KB2|Q84KB2_CUCME (Helix-loop-helix-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.1e-101
Identity = 215/288 (74.65%), Postives = 230/288 (79.86%), Query Frame = 0


Query: 1   MALEAVVFSQ---------DLYTSFGGGIWTNGSFQFPQIPHDFPEKQTENYPFEDWNSS 60
           MALEAVVFSQ         DLY+  GGGIW NGSF++P+IPHDFPE QTEN+PFEDWNSS
Sbjct: 1   MALEAVVFSQDPLCYNGSKDLYSLLGGGIWANGSFEYPEIPHDFPENQTENFPFEDWNSS 60

Query: 61  SSVLLPIPSPEEPAISRN----PPLEAESRTPNPIRPRKRRPKSRKNKEDIENQRMTHIA 120
           SSV +P PSP E A SRN    PPLEAES TP+P               +IENQRMTHIA
Sbjct: 61  SSVFVPNPSP-EAADSRNGLLKPPLEAESITPHPXXXXXXXXXXXXXXXEIENQRMTHIA 120

Query: 121 VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTMETKTK- 180
           VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLST+ETK K 
Sbjct: 121 VERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLSTIETKGKI 180

Query: 181 -----GC------SSSKPPFSEFFTFPQFKSMEGCCSLGENETQCSS-IADIEVTMVENH 240
                GC      S+SK PF+EFF+FPQFK+MEGC  + ENETQCSS +ADIEVTMVENH
Sbjct: 181 NNSAEGCCNSNSNSNSKIPFAEFFSFPQFKAMEGCSLVSENETQCSSTVADIEVTMVENH 240

Query: 241 ANLKIRSKRRPKQALKIVAGLHSLCLSVLHLNISTINQIVLYCLSVKV 263
           ANLKIRSKRRPKQ LKIVAGLHSL LSVLHLNISTINQIVLYCLSVKV
Sbjct: 241 ANLKIRSKRRPKQILKIVAGLHSLSLSVLHLNISTINQIVLYCLSVKV 287

[Close]

BLAST of Carg12888 vs. TrEMBL
Match: tr|A0A0R0F2U2|A0A0R0F2U2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100782243 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 6.8e-76
Identity = 183/318 (57.55%), Postives = 221/318 (69.50%), Query Frame = 0


Query: 1   MALEAVVFSQDL-------------YTSF---GGGIWTNGSFQFPQIPHDFPEKQTENYP 60
           MALEAVV+ Q               Y +    GGG W  G  +  Q    F E QTENYP
Sbjct: 20  MALEAVVYPQPQDPFGYGIKDPSYNYNNLLEGGGGNW--GFEKEEQGFVTFLENQTENYP 79

Query: 61  FEDWNSSSS--VLLPIPSPEEPAISRNPPL--EAESRTPNPIRPRKRRPKSRKNKEDIEN 120
           + +WN S S   +LP  +   P  S    +    +S    P RP++RR KSRKNKE+IEN
Sbjct: 80  YGEWNCSPSPPSMLPHLNASNPQSSETSNIHNNLDSSISTPARPKRRRTKSRKNKEEIEN 139

Query: 121 QRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLST 180
           QRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQ++Q L  
Sbjct: 140 QRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQRLQFLGG 199

Query: 181 METKTKGCSSSKPPFSEFFTFPQFK-SMEGCC--SLGENETQC---SSIADIEVTMVENH 240
            + K +    S  PFSEFF+FPQ+  S  G C  S   +E +C   S IADIEVTMVE+H
Sbjct: 200 QKEKEE---KSDVPFSEFFSFPQYSTSAGGGCDNSTAMSEQKCEAQSGIADIEVTMVESH 259

Query: 241 ANLKIRSKRRPKQALKIVAGLHSLCLSVLHLNISTINQIVLYCLSVKVEDDCKLNSVDEI 293
           ANLKIRSK+RPKQ LKIV+ LH + L++LHLN++T  +IVLY LSVKVE+DCKL SVDEI
Sbjct: 260 ANLKIRSKKRPKQLLKIVSSLHGMRLTILHLNVTTTGEIVLYSLSVKVEEDCKLGSVDEI 319

[Close]

BLAST of Carg12888 vs. TrEMBL
Match: tr|I1NC11|I1NC11_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100782243 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 6.8e-76
Identity = 183/318 (57.55%), Postives = 221/318 (69.50%), Query Frame = 0


Query: 1   MALEAVVFSQDL-------------YTSF---GGGIWTNGSFQFPQIPHDFPEKQTENYP 60
           MALEAVV+ Q               Y +    GGG W  G  +  Q    F E QTENYP
Sbjct: 10  MALEAVVYPQPQDPFGYGIKDPSYNYNNLLEGGGGNW--GFEKEEQGFVTFLENQTENYP 69

Query: 61  FEDWNSSSS--VLLPIPSPEEPAISRNPPL--EAESRTPNPIRPRKRRPKSRKNKEDIEN 120
           + +WN S S   +LP  +   P  S    +    +S    P RP++RR KSRKNKE+IEN
Sbjct: 70  YGEWNCSPSPPSMLPHLNASNPQSSETSNIHNNLDSSISTPARPKRRRTKSRKNKEEIEN 129

Query: 121 QRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQQVQVLST 180
           QRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQ++Q L  
Sbjct: 130 QRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKELEQRLQFLGG 189

Query: 181 METKTKGCSSSKPPFSEFFTFPQFK-SMEGCC--SLGENETQC---SSIADIEVTMVENH 240
            + K +    S  PFSEFF+FPQ+  S  G C  S   +E +C   S IADIEVTMVE+H
Sbjct: 190 QKEKEE---KSDVPFSEFFSFPQYSTSAGGGCDNSTAMSEQKCEAQSGIADIEVTMVESH 249

Query: 241 ANLKIRSKRRPKQALKIVAGLHSLCLSVLHLNISTINQIVLYCLSVKVEDDCKLNSVDEI 293
           ANLKIRSK+RPKQ LKIV+ LH + L++LHLN++T  +IVLY LSVKVE+DCKL SVDEI
Sbjct: 250 ANLKIRSKKRPKQLLKIVSSLHGMRLTILHLNVTTTGEIVLYSLSVKVEEDCKLGSVDEI 309

The following BLAST results are available for this feature:

BLAST of Carg12888 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946286.1	1.5e-159	100.00	transcription factor bHLH94-like isoform X2 [Cucurbita moschata] >XP_023521809.1...	[more]
XP_022999125.1	6.3e-158	98.97	transcription factor bHLH94-like [Cucurbita maxima]	[more]
XP_022946285.1	2.4e-157	97.33	transcription factor bHLH94-like isoform X1 [Cucurbita moschata] >XP_023521808.1...	[more]
XP_008454918.1	1.6e-116	75.79	PREDICTED: transcription factor bHLH94-like [Cucumis melo]	[more]
XP_004139191.1	4.6e-116	75.47	PREDICTED: transcription factor bHLH94-like [Cucumis sativus] >KGN60884.1 Helix-...	[more]

BLAST of Carg12888 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G22490.1	1.8e-53	43.81	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G72210.1	2.5e-52	55.61	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G46690.1	3.8e-40	43.89	beta HLH protein 71	[more]
AT5G65320.1	1.1e-39	46.01	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G61950.1	3.7e-35	42.73	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of Carg12888 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SK91\|BH094_ARATH	3.2e-52	43.81	Transcription factor bHLH94 OS=Arabidopsis thaliana OX=3702 GN=BHLH94 PE=1 SV=2	[more]
sp\|Q9C7T4\|BH096_ARATH	4.6e-51	55.61	Transcription factor bHLH96 OS=Arabidopsis thaliana OX=3702 GN=BHLH96 PE=1 SV=1	[more]
sp\|Q56XR0\|BH071_ARATH	6.9e-39	43.89	Transcription factor bHLH71 OS=Arabidopsis thaliana OX=3702 GN=BHLH71 PE=1 SV=1	[more]
sp\|Q9FKQ6\|BH099_ARATH	2.0e-38	46.01	Transcription factor bHLH99 OS=Arabidopsis thaliana OX=3702 GN=BHLH99 PE=2 SV=1	[more]
sp\|Q700E4\|BH067_ARATH	6.7e-34	42.73	Transcription factor bHLH67 OS=Arabidopsis thaliana OX=3702 GN=BHLH67 PE=2 SV=1	[more]

BLAST of Carg12888 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C0F1\|A0A1S3C0F1_CUCME	1.0e-116	75.79	transcription factor bHLH94-like OS=Cucumis melo OX=3656 GN=LOC103495217 PE=4 SV...	[more]
tr\|A0A0A0LIK9\|A0A0A0LIK9_CUCSA	3.0e-116	75.47	Helix-loop-helix-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G021550 PE=4 SV...	[more]
tr\|Q84KB2\|Q84KB2_CUCME	2.1e-101	74.65	Helix-loop-helix-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A0R0F2U2\|A0A0R0F2U2_SOYBN	6.8e-76	57.55	Uncharacterized protein OS=Glycine max OX=3847 GN=100782243 PE=4 SV=1	[more]
tr\|I1NC11\|I1NC11_SOYBN	6.8e-76	57.55	Uncharacterized protein OS=Glycine max OX=3847 GN=100782243 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036638	HLH_DNA-bd_sf
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12888-RA	Carg12888-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 106..157 e-value: 2.1E-10 score: 50.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 101..152 e-value: 1.6E-10 score: 40.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 100..151 score: 15.402
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	CDD	cd00083	HLH	coord: 99..156 e-value: 7.34004E-14 score: 63.7723
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	G3DSA:4.10.280.10		coord: 85..166 e-value: 1.1E-11 score: 46.5
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 100..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..102
None	No IPR available	PANTHER	PTHR11969:SF26	SUBFAMILY NOT NAMED	coord: 2..292
None	No IPR available	PANTHER	PTHR11969	MAX DIMERIZATION, MAD	coord: 2..292

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12888	Cla019871	Watermelon (97103) v1	carwmB0907
Carg12888	Csa2G021550	Cucumber (Chinese Long) v2	carcuB0917
Carg12888	MELO3C004287	Melon (DHL92) v3.5.1	carmeB0893
Carg12888	ClCG02G015980	Watermelon (Charleston Gray)	carwcgB0883
Carg12888	CSPI02G03740	Wild cucumber (PI 183967)	carcpiB0938
Carg12888	Cucsa.091670	Cucumber (Gy14) v1	carcgyB1020
Carg12888	CmaCh05G011540	Cucurbita maxima (Rimu)	carcmaB1246
Carg12888	CmaCh12G010850	Cucurbita maxima (Rimu)	carcmaB1241
Carg12888	CmoCh05G011650	Cucurbita moschata (Rifu)	carcmoB1216
Carg12888	CmoCh12G011010	Cucurbita moschata (Rifu)	carcmoB1212
Carg12888	Lsi11G005230	Bottle gourd (USVL1VR-Ls)	carlsiB822
Carg12888	Cp4.1LG11g09400	Cucurbita pepo (Zucchini)	carcpeB1252
Carg12888	Cp4.1LG07g09050	Cucurbita pepo (Zucchini)	carcpeB1256
Carg12888	CsGy2G003830	Cucumber (Gy14) v2	carcgybB0890
Carg12888	MELO3C004287.2	Melon (DHL92) v3.6.1	carmedB0900
Carg12888	CsaV3_2G005070	Cucumber (Chinese Long) v3	carcucB0940
Carg12888	Cla97C02G041750	Watermelon (97103) v2	carwmbB0946
Carg12888	Bhi05G001662	Wax gourd	carwgoB1046

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12888	Carg17558	Silver-seed gourd	carcarB587

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12888	Watermelon (97103) v2	carwmbB0949