Carg12862 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12862
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Pectinesterase
Location	Cucurbita_argyrosperma_scaffold_043 : 783063 .. 784837 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATATAATAAATCTCTAAATTTTTGTAAAAAAATATATGTTGTTTTGAATTGATCTACAAAACCAAGATTTGATGATGAACTAAAGTGTATTGTAATATGAACTTGCAGAGAGAAGGTATACATACCCATCACCAAGCCATATATTTCATTGATAGGAAACAGGAGACGAATGACAGACACTGTAATTACATCGAACAGCAAAGCTTCCGACAAAGATGTCAGCGGACTCGAGCTCGGGACATATAGAACAGCGACGGTTGCAATCGACTCCGACTACTTCTGTGCATCGGGAATCACATTCGAGGTTAGCAGCATAAACAACAAAGATAAACAAAGATAACTGAGTTTTGTAAGTTAAATGTGGTTTGGTTTGTAGAACACAGTTGTTTCAGCGCCTGGAGATAAGGGAAGACAAGCTGTGGCTCTAAGGATTTCAGGAGAGAAGGCTATGTTTTATAGAGTCAAGTTCTTGGGACAACAAGATACACTTTTGGATGATATGGGCACACACTATTTCTATCAATGTCACATTCAAGGGACTATTGATTTCATATTTGGTACGGCTAGATCGCTCTATGAGGTAACGAGTCTCGTTACTAGACATGTAGTTGATACCTTTCGAGTTTTGAACTTGTCGTCTGATGTTTGTCTGTTTTTTTTCTCTCTTGAAAACCAGCAATGTGTGATAACTTCCACGGCGGAGACCTTTGGAGCTATAGCAGCGCATCATCGGAGCTCGCCGGACGATGACACCGGGTTCTCTTTTGTGCGCTGCGTGATTAATGGAAGTGGCAGAGTACTCCTGGGAAGAGCATGGGGGACCTATTCAAGAACAATATATTCTTACTGTTATATTGAAGATATGATAAGTCCGTTAGGATGGAGCGACTGGAGCGACCCATCAAGACAAAGGTAAGGCAAATATACTTACAATAACGACCCCCCGACACATACACACACATACCATGACATTAACCGAGGTGGGCGTAAGTTGACCCGAACACTCATAAGAATCATAAATATCCCTCCACCTCTTGAATCAAGCTAATCTAATAGAAATTTTCTATTGTTATCAAGACAAAGTATACTTACAATGACGACCCCCCCCGACACACACACATCCCATGAGATTAACCGAGGTGGGTGTAGGTTGACCCGAACACTTACAAGAATTATAAATATCCCTCCACCTCTTGAATCAAGCTAATATTGTTATAAGACAAAGGTAAAAGGAAAAGTACACTTACAATAACGACCCCCCGACCCCCGACCCCCGACACATACACACACATCCTGTGAGATTAACCGAGGTGGGCATAGGTTGACCCGAACACTCACAAGAATTATAAATATCCCTCCACCTCATGAATCAAGCTAACCTAATAGAACTTTTCAATTGTTATCCACACACAGGACGGCAGTTTTTGGGCAATATAGATGCAGGGGCAGCGGAGCTAACACAAAAGGTTGGGTGCCATGGGCAAGGACTTTCACCTCCGAGGAAGTGAGACCTTACGTAGATAGGAACTTCATCAATGGAGAACAATGGCTTAACCTATGATGAGATATAACACAAAGAATATTAACTTTTGACACTTCCAATACAAAAAAACATATATAGAACAACCATCATGTTGAGTTCCAATGATGGAATAACAAACAAAAATGTAGCAACAATTACATCAACGCCAAAGAGTATTTAGAAACAAGCGTCTATGTTTAGAACATTTTATAATTCTTTCTAGTGGTTATCTACTTCCTTTTTTTGCTTA

mRNA sequence

TATATATAATAAATCTCTAAATTTTTGTAAAAAAATATATGTTGTTTTGAATTGATCTACAAAACCAAGATTTGATGATGAACTAAAGTGTATTGTAATATGAACTTGCAGAGAGAAGGTATACATACCCATCACCAAGCCATATATTTCATTGATAGGAAACAGGAGACGAATGACAGACACTGTAATTACATCGAACAGCAAAGCTTCCGACAAAGATGTCAGCGGACTCGAGCTCGGGACATATAGAACAGCGACGGTTGCAATCGACTCCGACTACTTCTGTGCATCGGGAATCACATTCGAGAACACAGTTGTTTCAGCGCCTGGAGATAAGGGAAGACAAGCTCAATGTGTGATAACTTCCACGGCGGAGACCTTTGGAGCTATAGCAGCGCATCATCGGAGCTCGCCGGACGATGACACCGGGTTCTCTTTTGTGCGCTGCGTGATTAATGGAAGTGGCAGAGTACTCCTGGGAAGAGCATGGGGGACCTATTCAAGAACAATATATTCTTACTGTTATATTGAAGATATGATAAGTCCGTTAGGATGGAGCGACTGGAGCGACCCATCAAGACAAAGGACGGCAGTTTTTGGGCAATATAGATGCAGGGGCAGCGGAGCTAACACAAAAGGTTGGGTGCCATGGGCAAGGACTTTCACCTCCGAGGAAGTGAGACCTTACGTAGATAGGAACTTCATCAATGGAGAACAATGGCTTAACCTATGATGAGATATAACACAAAGAATATTAACTTTTGACACTTCCAATACAAAAAAACATATATAGAACAACCATCATGTTGAGTTCCAATGATGGAATAACAAACAAAAATGTAGCAACAATTACATCAACGCCAAAGAGTATTTAGAAACAAGCGTCTATGTTTAGAACATTTTATAATTCTTTCTAGTGGTTATCTACTTCCTTTTTTTGCTTA

Coding sequence (CDS)

ATGACAGACACTGTAATTACATCGAACAGCAAAGCTTCCGACAAAGATGTCAGCGGACTCGAGCTCGGGACATATAGAACAGCGACGGTTGCAATCGACTCCGACTACTTCTGTGCATCGGGAATCACATTCGAGAACACAGTTGTTTCAGCGCCTGGAGATAAGGGAAGACAAGCTCAATGTGTGATAACTTCCACGGCGGAGACCTTTGGAGCTATAGCAGCGCATCATCGGAGCTCGCCGGACGATGACACCGGGTTCTCTTTTGTGCGCTGCGTGATTAATGGAAGTGGCAGAGTACTCCTGGGAAGAGCATGGGGGACCTATTCAAGAACAATATATTCTTACTGTTATATTGAAGATATGATAAGTCCGTTAGGATGGAGCGACTGGAGCGACCCATCAAGACAAAGGACGGCAGTTTTTGGGCAATATAGATGCAGGGGCAGCGGAGCTAACACAAAAGGTTGGGTGCCATGGGCAAGGACTTTCACCTCCGAGGAAGTGAGACCTTACGTAGATAGGAACTTCATCAATGGAGAACAATGGCTTAACCTATGA

Protein sequence

MTDTVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTVVSAPGDKGRQAQCVITSTAETFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPLGWSDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWLNL

Homology

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BLAST of Carg12862 vs. NCBI nr
Match: XP_022936222.1 (pectinesterase QRT1 [Cucurbita moschata])

HSP 1 Score: 367.1 bits (941), Expect = 3.6e-98
Identity = 186/240 (77.50%), Postives = 186/240 (77.50%), Query Frame = 0


Query: 1   MTDTVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTVVSAPGDKGRQA- 60
           MTDTVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTVVSAPGDKGRQA 
Sbjct: 134 MTDTVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTVVSAPGDKGRQAV 193

Query: 61  -----------------------------------------------------QCVITST 120
                                                                QCVITST
Sbjct: 194 ALRISGEKAMFYRVKFLGQQDTLLDDMGTHYFYQCHIQGTIDFIFGTARSLYEQCVITST 253

Query: 121 AETFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPL 180
           AETFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPL
Sbjct: 254 AETFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPL 313

Query: 181 GWSDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWLNL 187
           GWSDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWLNL
Sbjct: 314 GWSDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWLNL 373

[Close]

BLAST of Carg12862 vs. NCBI nr
Match: XP_022975722.1 (pectinesterase QRT1 [Cucurbita maxima])

HSP 1 Score: 367.1 bits (941), Expect = 3.6e-98
Identity = 186/240 (77.50%), Postives = 186/240 (77.50%), Query Frame = 0


Query: 1   MTDTVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTVVSAPGDKGRQA- 60
           MTDTVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTVVSAPGDKGRQA 
Sbjct: 136 MTDTVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTVVSAPGDKGRQAV 195

Query: 61  -----------------------------------------------------QCVITST 120
                                                                QCVITST
Sbjct: 196 ALRISGEKAMFYRVKFLGQQDTLLDDMGTHYFYQCHIQGTIDFIFGTARSLYEQCVITST 255

Query: 121 AETFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPL 180
           AETFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPL
Sbjct: 256 AETFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPL 315

Query: 181 GWSDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWLNL 187
           GWSDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWLNL
Sbjct: 316 GWSDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWLNL 375

[Close]

BLAST of Carg12862 vs. NCBI nr
Match: XP_023536329.1 (pectinesterase QRT1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 355.1 bits (910), Expect = 1.4e-94
Identity = 186/271 (68.63%), Postives = 186/271 (68.63%), Query Frame = 0


Query: 1   MTDTVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTVVSAPGDKGRQA- 60
           MTDTVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTVVSAPGDKGRQA 
Sbjct: 132 MTDTVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTVVSAPGDKGRQAV 191

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 192 ALRISGEKAMFYRVKFLGQQDTLLDDMGTHYFYQCHIQGTIDFIFGTARSLYEVTVTRSR 251

Query: 121 ------------------------QCVITSTAETFGAIAAHHRSSPDDDTGFSFVRCVIN 180
                                   QCVITSTAETFGAIAAHHRSSPDDDTGFSFVRCVIN
Sbjct: 252 QVVDPFRVLNLSSDVCLFFSLENQQCVITSTAETFGAIAAHHRSSPDDDTGFSFVRCVIN 311

Query: 181 GSGRVLLGRAWGTYSRTIYSYCYIEDMISPLGWSDWSDPSRQRTAVFGQYRCRGSGANTK 187
           GSGRVLLGRAWGTYSRTIYSYCYIEDMISPLGWSDWSDPSRQRTAVFGQYRCRGSGANTK
Sbjct: 312 GSGRVLLGRAWGTYSRTIYSYCYIEDMISPLGWSDWSDPSRQRTAVFGQYRCRGSGANTK 371

[Close]

BLAST of Carg12862 vs. NCBI nr
Match: XP_008463039.1 (PREDICTED: pectinesterase QRT1 [Cucumis melo])

HSP 1 Score: 310.8 bits (795), Expect = 3.0e-81
Identity = 152/240 (63.33%), Postives = 172/240 (71.67%), Query Frame = 0


Query: 1   MTDTVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTVVSAPGDKGRQA- 60
           +T+TVIT N KASDK+++G+ELGTY+TATVAIDSDYFCA+GITFENT V+ PGDKGRQ  
Sbjct: 139 VTETVITWNDKASDKNINGVELGTYKTATVAIDSDYFCATGITFENTNVAKPGDKGRQGV 198

Query: 61  -----------------------------------------------------QCVITST 120
                                                                QCVITST
Sbjct: 199 ALRITGDKAVFYRVKFLGGQDTLLDDLGTHYFYQCHIRGSVDFIFGTARSLYEQCVITST 258

Query: 121 AETFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPL 180
           AE++GAIAAHHR+SPDDDTGFSFVRCVINGSG+V LGRAWG YSRTIYS CYIED+I+PL
Sbjct: 259 AESYGAIAAHHRASPDDDTGFSFVRCVINGSGKVYLGRAWGNYSRTIYSNCYIEDVINPL 318

Query: 181 GWSDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWLNL 187
           GWSDW+DPSRQRT VFGQY CRGSGANTK WVPWA+TF+ EEVRP+VDR +I GEQWLNL
Sbjct: 319 GWSDWNDPSRQRTVVFGQYNCRGSGANTKDWVPWAKTFSYEEVRPFVDRKYIKGEQWLNL 378

[Close]

BLAST of Carg12862 vs. NCBI nr
Match: XP_004150299.1 (PREDICTED: pectinesterase QRT1 [Cucumis sativus])

HSP 1 Score: 308.5 bits (789), Expect = 1.5e-80
Identity = 152/240 (63.33%), Postives = 168/240 (70.00%), Query Frame = 0


Query: 1   MTDTVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTVVSAPGDKGRQA- 60
           +TDTVIT N KASDK + G+ELGTYRTATVAIDSDYFCA+GITFENTVV+ PGDKGRQ  
Sbjct: 120 VTDTVITWNDKASDKSIDGVELGTYRTATVAIDSDYFCATGITFENTVVAKPGDKGRQGV 179

Query: 61  -----------------------------------------------------QCVITST 120
                                                                QCVITST
Sbjct: 180 ALRITGDKAMFYRVKFLGGQDTLLDDLGTHYYYQCHIQGSVDFIFGTARSLYEQCVITST 239

Query: 121 AETFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPL 180
           AE++GAIAAHHR+SPDDDTGFSFVRCVINGSG+V LGRAWG YSRTIYS CYIED+I+PL
Sbjct: 240 AESYGAIAAHHRASPDDDTGFSFVRCVINGSGKVYLGRAWGNYSRTIYSNCYIEDVINPL 299

Query: 181 GWSDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWLNL 187
           GWSDW+DPSRQRT  FGQY CRGSGA+TK WV WA+TF  EEVRP+VDR +I GEQWLNL
Sbjct: 300 GWSDWNDPSRQRTVAFGQYNCRGSGASTKDWVKWAKTFNYEEVRPFVDRKYIKGEQWLNL 359

[Close]

BLAST of Carg12862 vs. TAIR10
Match: AT5G55590.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 228.0 bits (580), Expect = 4.7e-60
Identity = 113/238 (47.48%), Postives = 144/238 (60.50%), Query Frame = 0


Query: 3   DTVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTVVSAPGDKGRQA--- 62
           DTVI+ + KASD    G ELGTYRTA+V+I+SD+FCA+ ITFENTVV+  G++GRQA   
Sbjct: 143 DTVISWSDKASDLGCDGKELGTYRTASVSIESDFFCATAITFENTVVAEAGEQGRQAVAL 202

Query: 63  ---------------------------------------------------QCVITSTAE 122
                                                               C I STA+
Sbjct: 203 RIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHSTAK 262

Query: 123 TFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPLGW 182
            +GAIAAHHR S  +DTGFSFV C I+G+G++ LGRAWG YSRT+YS C+I D+I+P+GW
Sbjct: 263 RYGAIAAHHRDSETEDTGFSFVNCDISGTGQIYLGRAWGNYSRTVYSNCFIADIITPVGW 322

Query: 183 SDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWLNL 187
           SDW  P RQR  +FG+Y CRG GA   G VPW++T T +EV+P++ R FI G+QWL L
Sbjct: 323 SDWKHPERQRKVMFGEYNCRGRGAERGGRVPWSKTLTRDEVKPFLGREFIYGDQWLRL 380

[Close]

BLAST of Carg12862 vs. TAIR10
Match: AT5G19730.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-39
Identity = 83/238 (34.87%), Postives = 119/238 (50.00%), Query Frame = 0


Query: 4   TVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTV-VSAPGDKGRQA--- 63
           T +     A   D  G  +GTY +A+ A++S +F A  ITF NT  V  PG  G+QA   
Sbjct: 146 TTVEWGDTAQTPDSKGNPMGTYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVAL 205

Query: 64  ---------------------------------------------------QCVITSTAE 123
                                                               C + + A+
Sbjct: 206 RVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIAD 265

Query: 124 TFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPLGW 183
             GA+ A  RSS  +DTGFSFV+C + G+G + LGRAWG +SR +++Y Y++++I P GW
Sbjct: 266 KLGAVTAQGRSSVLEDTGFSFVKCKVTGTGVLYLGRAWGPFSRVVFAYTYMDNIILPRGW 325

Query: 184 SDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWLNL 187
            +W DPSR+ T  +GQY+C G+GAN  G V WAR  T EE +P++   FI+G +W+ L
Sbjct: 326 YNWGDPSREMTVFYGQYKCTGAGANYGGRVAWARELTDEEAKPFLSLTFIDGSEWIKL 383

[Close]

BLAST of Carg12862 vs. TAIR10
Match: AT5G47500.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 138.3 bits (347), Expect = 4.9e-33
Identity = 77/237 (32.49%), Postives = 112/237 (47.26%), Query Frame = 0


Query: 4   TVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTV-VSAPGDKGRQA--- 63
           T I  + +ASD   +G +L TY+TA+V + ++YF A  I+F NT     PG +G QA   
Sbjct: 121 TAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQAVAF 180

Query: 64  ---------------------------------------------------QCVITSTAE 123
                                                               C + S A 
Sbjct: 181 RISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIAS 240

Query: 124 TFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPLGW 183
            FG+IAAH R+ P++ TGF+FV C + G+G + +GRA G YSR +Y+Y Y + +++  GW
Sbjct: 241 RFGSIAAHGRTCPEEKTGFAFVGCRVTGTGPLYVGRAMGQYSRIVYAYTYFDALVAHGGW 300

Query: 184 SDWSDPS-RQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWL 185
            DW   S + +TA FG Y C G GA     V WAR    E   P++ ++F+NG  W+
Sbjct: 301 DDWDHKSNKSKTAFFGVYNCYGPGAAATRGVSWARALDYESAHPFIAKSFVNGRHWI 357

[Close]

BLAST of Carg12862 vs. TAIR10
Match: AT2G36710.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 125.6 bits (314), Expect = 3.3e-29
Identity = 50/120 (41.67%), Postives = 81/120 (67.50%), Query Frame = 0


Query: 65  STAETFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMIS 124
           +T+   G+I A  R S D+ +GFSFV C I+GSG +LLGRAWG Y+  ++S  Y+  +I+
Sbjct: 266 NTSGVTGSITAQGRQSEDEQSGFSFVNCKIDGSGEILLGRAWGAYATVVFSNTYMSGIIT 325

Query: 125 PLGWSDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWL 184
           P GW++W D ++++T  FG+++C G GA+ K  V + +  T  E   ++D +FI+G++WL
Sbjct: 326 PEGWNNWGDSTKEKTVTFGEHKCYGPGADYKERVLFGKQLTDSEASSFIDVSFIDGDEWL 385

[Close]

BLAST of Carg12862 vs. TAIR10
Match: AT2G21610.1 (pectinesterase 11)

HSP 1 Score: 120.6 bits (301), Expect = 1.1e-27
Identity = 44/125 (35.20%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 60  QCVITSTAETFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYI 119
           +C + S +   G+I A  R+S  + +GF+F+ C + GSG   LGR WG YSR +++Y + 
Sbjct: 208 RCHLHSLSPNNGSITAQMRTSATEKSGFTFLGCKLTGSGSTFLGRPWGAYSRVVFAYSFF 267

Query: 120 EDMISPLGWSDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFIN 179
            ++++P GW+ W D +++ T  +G+Y+C G GA+ +  V W++  + EE   ++ ++FI 
Sbjct: 268 SNVVAPQGWNQWGDSTKENTVYYGEYKCYGPGADREQRVEWSKQLSDEEATVFLSKDFIG 327

Query: 180 GEQWL 185
           G+ WL
Sbjct: 328 GKDWL 332

[Close]

BLAST of Carg12862 vs. Swiss-Prot
Match: sp|Q9FM79|PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.5e-59
Identity = 113/238 (47.48%), Postives = 144/238 (60.50%), Query Frame = 0


Query: 3   DTVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTVVSAPGDKGRQA--- 62
           DTVI+ + KASD    G ELGTYRTA+V+I+SD+FCA+ ITFENTVV+  G++GRQA   
Sbjct: 143 DTVISWSDKASDLGCDGKELGTYRTASVSIESDFFCATAITFENTVVAEAGEQGRQAVAL 202

Query: 63  ---------------------------------------------------QCVITSTAE 122
                                                               C I STA+
Sbjct: 203 RIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHSTAK 262

Query: 123 TFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPLGW 182
            +GAIAAHHR S  +DTGFSFV C I+G+G++ LGRAWG YSRT+YS C+I D+I+P+GW
Sbjct: 263 RYGAIAAHHRDSETEDTGFSFVNCDISGTGQIYLGRAWGNYSRTVYSNCFIADIITPVGW 322

Query: 183 SDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWLNL 187
           SDW  P RQR  +FG+Y CRG GA   G VPW++T T +EV+P++ R FI G+QWL L
Sbjct: 323 SDWKHPERQRKVMFGEYNCRGRGAERGGRVPWSKTLTRDEVKPFLGREFIYGDQWLRL 380

[Close]

BLAST of Carg12862 vs. Swiss-Prot
Match: sp|Q8VYZ3|PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.2e-38
Identity = 83/238 (34.87%), Postives = 119/238 (50.00%), Query Frame = 0


Query: 4   TVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTV-VSAPGDKGRQA--- 63
           T +     A   D  G  +GTY +A+ A++S +F A  ITF NT  V  PG  G+QA   
Sbjct: 146 TTVEWGDTAQTPDSKGNPMGTYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVAL 205

Query: 64  ---------------------------------------------------QCVITSTAE 123
                                                               C + + A+
Sbjct: 206 RVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIAD 265

Query: 124 TFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPLGW 183
             GA+ A  RSS  +DTGFSFV+C + G+G + LGRAWG +SR +++Y Y++++I P GW
Sbjct: 266 KLGAVTAQGRSSVLEDTGFSFVKCKVTGTGVLYLGRAWGPFSRVVFAYTYMDNIILPRGW 325

Query: 184 SDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWLNL 187
            +W DPSR+ T  +GQY+C G+GAN  G V WAR  T EE +P++   FI+G +W+ L
Sbjct: 326 YNWGDPSREMTVFYGQYKCTGAGANYGGRVAWARELTDEEAKPFLSLTFIDGSEWIKL 383

[Close]

BLAST of Carg12862 vs. Swiss-Prot
Match: sp|Q8LPF3|PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana OX=3702 GN=PME68 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 8.9e-32
Identity = 77/237 (32.49%), Postives = 112/237 (47.26%), Query Frame = 0


Query: 4   TVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTV-VSAPGDKGRQA--- 63
           T I  + +ASD   +G +L TY+TA+V + ++YF A  I+F NT     PG +G QA   
Sbjct: 121 TAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQAVAF 180

Query: 64  ---------------------------------------------------QCVITSTAE 123
                                                               C + S A 
Sbjct: 181 RISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIAS 240

Query: 124 TFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPLGW 183
            FG+IAAH R+ P++ TGF+FV C + G+G + +GRA G YSR +Y+Y Y + +++  GW
Sbjct: 241 RFGSIAAHGRTCPEEKTGFAFVGCRVTGTGPLYVGRAMGQYSRIVYAYTYFDALVAHGGW 300

Query: 184 SDWSDPS-RQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWL 185
            DW   S + +TA FG Y C G GA     V WAR    E   P++ ++F+NG  W+
Sbjct: 301 DDWDHKSNKSKTAFFGVYNCYGPGAAATRGVSWARALDYESAHPFIAKSFVNGRHWI 357

[Close]

BLAST of Carg12862 vs. Swiss-Prot
Match: sp|Q9ZQA3|PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana OX=3702 GN=PME15 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.9e-28
Identity = 50/120 (41.67%), Postives = 81/120 (67.50%), Query Frame = 0


Query: 65  STAETFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMIS 124
           +T+   G+I A  R S D+ +GFSFV C I+GSG +LLGRAWG Y+  ++S  Y+  +I+
Sbjct: 266 NTSGVTGSITAQGRQSEDEQSGFSFVNCKIDGSGEILLGRAWGAYATVVFSNTYMSGIIT 325

Query: 125 PLGWSDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWL 184
           P GW++W D ++++T  FG+++C G GA+ K  V + +  T  E   ++D +FI+G++WL
Sbjct: 326 PEGWNNWGDSTKEKTVTFGEHKCYGPGADYKERVLFGKQLTDSEASSFIDVSFIDGDEWL 385

[Close]

BLAST of Carg12862 vs. Swiss-Prot
Match: sp|Q9SIJ9|PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana OX=3702 GN=PME11 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.9e-26
Identity = 44/125 (35.20%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 60  QCVITSTAETFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYI 119
           +C + S +   G+I A  R+S  + +GF+F+ C + GSG   LGR WG YSR +++Y + 
Sbjct: 208 RCHLHSLSPNNGSITAQMRTSATEKSGFTFLGCKLTGSGSTFLGRPWGAYSRVVFAYSFF 267

Query: 120 EDMISPLGWSDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFIN 179
            ++++P GW+ W D +++ T  +G+Y+C G GA+ +  V W++  + EE   ++ ++FI 
Sbjct: 268 SNVVAPQGWNQWGDSTKENTVYYGEYKCYGPGADREQRVEWSKQLSDEEATVFLSKDFIG 327

Query: 180 GEQWL 185
           G+ WL
Sbjct: 328 GKDWL 332

[Close]

BLAST of Carg12862 vs. TrEMBL
Match: tr|A0A1S3CIB1|A0A1S3CIB1_CUCME (Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103501278 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.0e-81
Identity = 152/240 (63.33%), Postives = 172/240 (71.67%), Query Frame = 0


Query: 1   MTDTVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTVVSAPGDKGRQA- 60
           +T+TVIT N KASDK+++G+ELGTY+TATVAIDSDYFCA+GITFENT V+ PGDKGRQ  
Sbjct: 139 VTETVITWNDKASDKNINGVELGTYKTATVAIDSDYFCATGITFENTNVAKPGDKGRQGV 198

Query: 61  -----------------------------------------------------QCVITST 120
                                                                QCVITST
Sbjct: 199 ALRITGDKAVFYRVKFLGGQDTLLDDLGTHYFYQCHIRGSVDFIFGTARSLYEQCVITST 258

Query: 121 AETFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPL 180
           AE++GAIAAHHR+SPDDDTGFSFVRCVINGSG+V LGRAWG YSRTIYS CYIED+I+PL
Sbjct: 259 AESYGAIAAHHRASPDDDTGFSFVRCVINGSGKVYLGRAWGNYSRTIYSNCYIEDVINPL 318

Query: 181 GWSDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWLNL 187
           GWSDW+DPSRQRT VFGQY CRGSGANTK WVPWA+TF+ EEVRP+VDR +I GEQWLNL
Sbjct: 319 GWSDWNDPSRQRTVVFGQYNCRGSGANTKDWVPWAKTFSYEEVRPFVDRKYIKGEQWLNL 378

[Close]

BLAST of Carg12862 vs. TrEMBL
Match: tr|A0A0A0K706|A0A0A0K706_CUCSA (Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_7G160530 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.0e-80
Identity = 152/240 (63.33%), Postives = 168/240 (70.00%), Query Frame = 0


Query: 1   MTDTVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTVVSAPGDKGRQA- 60
           +TDTVIT N KASDK + G+ELGTYRTATVAIDSDYFCA+GITFENTVV+ PGDKGRQ  
Sbjct: 131 VTDTVITWNDKASDKSIDGVELGTYRTATVAIDSDYFCATGITFENTVVAKPGDKGRQGV 190

Query: 61  -----------------------------------------------------QCVITST 120
                                                                QCVITST
Sbjct: 191 ALRITGDKAMFYRVKFLGGQDTLLDDLGTHYYYQCHIQGSVDFIFGTARSLYEQCVITST 250

Query: 121 AETFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPL 180
           AE++GAIAAHHR+SPDDDTGFSFVRCVINGSG+V LGRAWG YSRTIYS CYIED+I+PL
Sbjct: 251 AESYGAIAAHHRASPDDDTGFSFVRCVINGSGKVYLGRAWGNYSRTIYSNCYIEDVINPL 310

Query: 181 GWSDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWLNL 187
           GWSDW+DPSRQRT  FGQY CRGSGA+TK WV WA+TF  EEVRP+VDR +I GEQWLNL
Sbjct: 311 GWSDWNDPSRQRTVAFGQYNCRGSGASTKDWVKWAKTFNYEEVRPFVDRKYIKGEQWLNL 370

[Close]

BLAST of Carg12862 vs. TrEMBL
Match: tr|A0A067L452|A0A067L452_JATCU (Pectinesterase OS=Jatropha curcas OX=180498 GN=JCGZ_01017 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.2e-64
Identity = 124/240 (51.67%), Postives = 154/240 (64.17%), Query Frame = 0


Query: 1   MTDTVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTVVSAPGDKGRQA- 60
           ++DT+I+ N+KASD D +G+ LGTYR+A+VAI+SDYFCA+GITFENTVV+ PG  G QA 
Sbjct: 100 ISDTIISWNNKASDIDSNGVALGTYRSASVAIESDYFCATGITFENTVVAVPGGYGMQAV 159

Query: 61  -----------------------------------------------------QCVITST 120
                                                                 CV+ S 
Sbjct: 160 ALRVSGDKAFFYRVKILGTQDTLLDETGSHYFYQCHIQGSVDFIFGRGKSLFEDCVLQSI 219

Query: 121 AETFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPL 180
           A   GAIAAHHR  PDDD+GFSFV CVING+G++LLGRAWG YSR IYSYCYI+++I+P 
Sbjct: 220 ARRSGAIAAHHRDFPDDDSGFSFVNCVINGTGKILLGRAWGNYSRAIYSYCYIDNIITPS 279

Query: 181 GWSDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWLNL 187
           GWSDW+ P RQ+T VFG+Y C G GA+T+G VPW++TFT EEVRP++D  FING QWL L
Sbjct: 280 GWSDWNYPDRQKTVVFGEYMCSGRGADTRGRVPWSKTFTYEEVRPFLDMQFINGHQWLRL 339

[Close]

BLAST of Carg12862 vs. TrEMBL
Match: tr|B9S9Q8|B9S9Q8_RICCO (Pectinesterase OS=Ricinus communis OX=3988 GN=RCOM_0521220 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.5e-63
Identity = 122/238 (51.26%), Postives = 153/238 (64.29%), Query Frame = 0


Query: 3   DTVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTVVSAPGDKGRQA--- 62
           DTVIT N+KASD D +G+ELGTYR+A+V I+SDYFCA+G+TFENTVV+ PG  G QA   
Sbjct: 146 DTVITWNNKASDMDSNGVELGTYRSASVTIESDYFCATGVTFENTVVAEPGGYGMQAVAL 205

Query: 63  ---------------------------------------------------QCVITSTAE 122
                                                               CV+ STA+
Sbjct: 206 RVSGDKAFFHKVRILGTQDTLLDETGSHFFYQCHIQGSVDFIFGKGRSLFQDCVLQSTAK 265

Query: 123 TFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPLGW 182
             GAIAAHHR +P DD+GFSFV CVING+G++LLGRAWG YSR IYSYC+I+D+I+P GW
Sbjct: 266 RSGAIAAHHRDTPFDDSGFSFVGCVINGTGKILLGRAWGNYSRAIYSYCFIDDVITPPGW 325

Query: 183 SDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWLNL 187
           SDW+ P RQ+T  FG+Y C G GA+T G VPW++TF+ EEVRP++D  FING++WL L
Sbjct: 326 SDWNYPDRQKTVFFGEYECSGRGADTGGRVPWSKTFSYEEVRPFLDMQFINGDEWLRL 383

[Close]

BLAST of Carg12862 vs. TrEMBL
Match: tr|A0A2I4DU44|A0A2I4DU44_9ROSI (Pectinesterase OS=Juglans regia OX=51240 GN=LOC108983471 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.7e-62
Identity = 118/239 (49.37%), Postives = 157/239 (65.69%), Query Frame = 0


Query: 2   TDTVITSNSKASDKDVSGLELGTYRTATVAIDSDYFCASGITFENTVVSAPGDKGRQA-- 61
           +DT+IT N+KASDKD +G++LGTYR+A+VAI+SDYFCA+GITFENTV++ PG  G QA  
Sbjct: 122 SDTIITWNNKASDKDRNGVQLGTYRSASVAIESDYFCATGITFENTVIAVPGGYGMQAVA 181

Query: 62  ----------------------------------------------------QCVITSTA 121
                                                               +CVI S A
Sbjct: 182 LRIAGDKAVLYRVRILGTQDTLLDDTGSHYFYQCHIQGSVDFIFGTSRSLYQECVIESIA 241

Query: 122 ETFGAIAAHHRSSPDDDTGFSFVRCVINGSGRVLLGRAWGTYSRTIYSYCYIEDMISPLG 181
           + +GAIAAHHR SP+++TGFSFV C I G+G +LLGRAWG YSR +YSYC I+D+++  G
Sbjct: 242 KNWGAIAAHHRDSPNENTGFSFVNCNITGTGSILLGRAWGNYSRAVYSYCNIDDIVTSSG 301

Query: 182 WSDWSDPSRQRTAVFGQYRCRGSGANTKGWVPWARTFTSEEVRPYVDRNFINGEQWLNL 187
           WSDW  PSRQ+T VFG+Y+CRG GA+T+G V W+++F+ EEV+P++D+ FI+GEQWL L
Sbjct: 302 WSDWKHPSRQKTVVFGEYQCRGRGADTRGRVSWSKSFSYEEVQPFLDKKFISGEQWLRL 360

The following BLAST results are available for this feature:

BLAST of Carg12862 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936222.1	3.6e-98	77.50	pectinesterase QRT1 [Cucurbita moschata]	[more]
XP_022975722.1	3.6e-98	77.50	pectinesterase QRT1 [Cucurbita maxima]	[more]
XP_023536329.1	1.4e-94	68.63	pectinesterase QRT1 [Cucurbita pepo subsp. pepo]	[more]
XP_008463039.1	3.0e-81	63.33	PREDICTED: pectinesterase QRT1 [Cucumis melo]	[more]
XP_004150299.1	1.5e-80	63.33	PREDICTED: pectinesterase QRT1 [Cucumis sativus]	[more]

BLAST of Carg12862 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G55590.1	4.7e-60	47.48	Pectin lyase-like superfamily protein	[more]
AT5G19730.1	1.2e-39	34.87	Pectin lyase-like superfamily protein	[more]
AT5G47500.1	4.9e-33	32.49	Pectin lyase-like superfamily protein	[more]
AT2G36710.1	3.3e-29	41.67	Pectin lyase-like superfamily protein	[more]
AT2G21610.1	1.1e-27	35.20	pectinesterase 11	[more]

BLAST of Carg12862 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FM79\|PME62_ARATH	8.5e-59	47.48	Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=2 SV=1	[more]
sp\|Q8VYZ3\|PME53_ARATH	2.2e-38	34.87	Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1	[more]
sp\|Q8LPF3\|PME68_ARATH	8.9e-32	32.49	Probable pectinesterase 68 OS=Arabidopsis thaliana OX=3702 GN=PME68 PE=2 SV=1	[more]
sp\|Q9ZQA3\|PME15_ARATH	5.9e-28	41.67	Probable pectinesterase 15 OS=Arabidopsis thaliana OX=3702 GN=PME15 PE=2 SV=1	[more]
sp\|Q9SIJ9\|PME11_ARATH	1.9e-26	35.20	Putative pectinesterase 11 OS=Arabidopsis thaliana OX=3702 GN=PME11 PE=3 SV=1	[more]

BLAST of Carg12862 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CIB1\|A0A1S3CIB1_CUCME	2.0e-81	63.33	Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103501278 PE=4 SV=1	[more]
tr\|A0A0A0K706\|A0A0A0K706_CUCSA	1.0e-80	63.33	Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_7G160530 PE=4 SV=1	[more]
tr\|A0A067L452\|A0A067L452_JATCU	2.2e-64	51.67	Pectinesterase OS=Jatropha curcas OX=180498 GN=JCGZ_01017 PE=4 SV=1	[more]
tr\|B9S9Q8\|B9S9Q8_RICCO	2.5e-63	51.26	Pectinesterase OS=Ricinus communis OX=3988 GN=RCOM_0521220 PE=4 SV=1	[more]
tr\|A0A2I4DU44\|A0A2I4DU44_9ROSI	2.7e-62	49.37	Pectinesterase OS=Juglans regia OX=51240 GN=LOC108983471 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0042545	cell wall modification

Vocabulary: **Molecular Function**
Term	Definition
GO:0030599	pectinesterase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005618	cell wall

Vocabulary: **INTERPRO**
Term	Definition
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold
IPR000070	Pectinesterase_cat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005618	cell wall
molecular_function	GO:0030599	pectinesterase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12862-RA	Carg12862-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 67..180 e-value: 9.0E-20 score: 70.5
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 64..186 e-value: 6.8E-32 score: 113.0
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 1..63 e-value: 4.0E-8 score: 35.1
None	No IPR available	PANTHER	PTHR31321	FAMILY NOT NAMED	coord: 2..59
None	No IPR available	PANTHER	PTHR31321:SF31	PECTINESTERASE QRT1	coord: 2..59
None	No IPR available	PANTHER	PTHR31321:SF31	PECTINESTERASE QRT1	coord: 60..186
None	No IPR available	PANTHER	PTHR31321	FAMILY NOT NAMED	coord: 60..186
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	SSF51126	Pectin lyase-like	coord: 2..185

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12862	Cla003296	Watermelon (97103) v1	carwmB0903
Carg12862	Csa7G160530	Cucumber (Chinese Long) v2	carcuB0924
Carg12862	MELO3C024917	Melon (DHL92) v3.5.1	carmeB0889
Carg12862	ClCG09G021160	Watermelon (Charleston Gray)	carwcgB0878
Carg12862	CSPI07G08780	Wild cucumber (PI 183967)	carcpiB0945
Carg12862	Cucsa.390850	Cucumber (Gy14) v1	carcgyB1026
Carg12862	CmaCh09G009970	Cucurbita maxima (Rimu)	carcmaB1240
Carg12862	Lsi02G018460	Bottle gourd (USVL1VR-Ls)	carlsiB823
Carg12862	Cp4.1LG06g08580	Cucurbita pepo (Zucchini)	carcpeB1255
Carg12862	CsGy7G008180	Cucumber (Gy14) v2	carcgybB0896
Carg12862	MELO3C024917.2	Melon (DHL92) v3.6.1	carmedB0897
Carg12862	CsaV3_7G018350	Cucumber (Chinese Long) v3	carcucB0946
Carg12862	Cla97C09G182590	Watermelon (97103) v2	carwmbB0949
Carg12862	Bhi09G001460	Wax gourd	carwgoB1048

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12862	Silver-seed gourd	carcarB638
Carg12862	Cucurbita maxima (Rimu)	carcmaB1245
Carg12862	Cucurbita moschata (Rifu)	carcmoB1211
Carg12862	Cucurbita moschata (Rifu)	carcmoB1215
Carg12862	Cucurbita pepo (Zucchini)	carcpeB1254