Carg12807 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATTCAGAATCTCCAATTAGGGTGAGGCAGTCTTCTCCTAGAAGGAGTCCGTCCCGCAGAGGAAGGTCACCTACACGGCACAAGAGCTCCTGTAATAGCAGTTCTCCAGCAAGAGACAAACATTCTAGTCATGCTAAATCTCCAAAGCATAAGAGGTCAAGTTCTCCACGAACTCGATCTCCTTCTCCAAGGACAAAACGGTTGAGGAGAGCTGCTGAAAGAGCTCCAGAGAAATCAAGTGATAGAGATTCTGAAAGGAACCGTGGCAGGGGTAATGATAAAGAAGCTCATCGGGAAAGGGTTTCTGATAGGGAATTAGGGAGCGAGAGAAAGGAGAGGAGTTCTAGACAGGATGTTAAGGATGGAAAATCTTCCAGGTCAAGACATGGGAATTCTTCTTCTCCATCAGAACGCCACCATAGGAGCCGCCACAGGTCCCCATCGCCCCAGCCTGTCTCTGATGCCAAAAATCATGATGAGGTGTTTGGTGATTTCTACTACTCAAAATCTGATACCATAAGCATAAGTGCCTGTTTATCAGAAATGTTATGATTGTAAATTGAGCACATTTTTCCTTTTCTCCTGTAAATTTCAATTAATTAATTTTGGTAGTTAAAGTAGATACCCACCCTCCTAACAGAGCATGTAATATTCAGCTGTCATTTCTTTTTATTACCTGAATTCTATTACTGATATTTCTTCATTTGATTTTTTTGCCCATTTTTATTGAACAAAGAGTAATTCTACATAAGTTATTTCGAGTAGCTAGCATTTTTTTTTTTTTAATTTTACGTAGTTGCAGTTGTCTTTGCTTTAAAGTTTATATGGAGCACAGCACCTAATTGTCATCTAACTTTCCAGGGGAGAAATTCAAGAAGGGCTGAAAGCCGGTGAGCTGCTTTTGCACCCTTTTTTTATAAGTCAAATAAAGTATTTGGTTTTCTAACGCAAGCATAATTTCTCTGGAGAGTGGAAATCCTCCAAATAGGCAAGAATAATGCTATGACATGCTTCAAAATTTGGATGGATATGTTGCCTTTTTCAATGTATGAATGTTATGACATATAATATATAATGTTCTACTTCTTTTTAGTGCTTGAAAGTAGTCTGTATCACTTCTTTTTAGTGCTTAACTAGCCAAAAAATTGTTGACCAAAAGATTGATGCTTCATTAGTTTTTCATCACAACTCCTATGGCTTTATGTACACATCTCATACTATTGTCTGGATCTGTTTGATGTTTTGGGAAGTGTGGGTTAAACTTGGCCTAGCTTCCACTTAAGTCAAATTACTGAATGTATGATGAAAAACTGAATGCATAATGAAATTCTGTTCTAATAGTTGTGAAGAGGACAAACTTTTACCTCAGATTTGCTTGTCTATCTTAGATTCCCTCTTTTTGTACTGAGAATCATCTATATCTATTGCCTCGCAGCTTCTCACTAGGTTCTGATTATTTGCATGAGCAGGAGTGATGACGATGATTCAGTGGCAAAGATGAAGGCTGCGGAGGAAGCCTTAGAAGCTAAGCAGAAGGTGTTATTTAGCCTTGGCTTGTTAGGCTCTTGAAAATAAGATGTTTTAGTGGAAAGCATGTAATTTTTTGTCAGCGTTCTTATCCTGTATATATTTTCCTTTAGGAGACTGCCTTCTGTGTGCAATTTATTTATTTATTTATTGACTTGTTTGTTGTTCATTAGTAGGATAAATATTGCTTTTGTTTCCGTTTTTGTTTGCAGGACAAACCTTCTTTTGAGCTATCCGGGAAGCTTGCAGCAGAAACTAATAGAGTAAGAGGTGAGATAATTTAATATCTCTATCCTTTTTAAATTTGTGTTGTGGGACATTTATGCACTTAGTTCCCTATAAATAGAATTATAATTCTTTCCTGCATTCGCTGCATTGAGACAAATTTCTGAAGCTACTCTGCTTTCATTTGGTAGGTATTACGTTGCTGTTTAATGAACCTCCAGATGCTAGAAAACCTGATGTAAGATGGCGGCTGTATGTTTTTAAGGCTGGAGAAGTGCTGAATGGTAAGGCTTTGTGATTTATATAGTCAATTTGATTTCATTCCAGACTTCCATATCTGTTTTCATCTTTTGGTGTTAATGGTTAGTGGATAAGCCCCATTTTGTGTGTAGCAACAAGCAAACTCTTATTTGTGGTCTAACATATGTGGGTCCAATACTTTTGTCAACGGAAAGCATGTATATCGTTTTCTTTCTTTTCCTTCTACTTAGTAAAAGATATATGATTTGTTACCTTTGTGACTCACTAAATTTAAATCGCGTATTTTCTTTCCACCATGGGTTGGCCTAGAGGTCAATAAGAGGGCCATGAGAACTTAAATTGCTGATTGATTCTCAAAATATTTTATTAGATTTGCTATTTGAATAAGAGTAGGATGAAATCCGAGGTTTCTTTTATTTTGGGTAAACTAGAGGTTTTTAATTTTTATTATTAATCAGCATTTAATGTTTAGTTGTTTGCTTTAAAATCAAGGTTGATATTAAGTACAGGGGCATTATTATCCACGAAATGTTATTTTCTTTTGTTCTCTGATTTTTTGTGCTGAGAGATGAGAGGAAAAACTGTTGTGTGAAAATATTTGAAAGAAAACTTCATAAGAAAAGAAGTGTGTAAGAAATAATGCCCTGTTTTTATATGCCGGTGGGTGCAAGGTTTAAAATGTTTTATCAATGGCTCGAGGTTACACCTTGGAGAAGTTTGAAAGTGATCAAGGAGTCTCCATTAGAGAGGGAACATGCGCACAGTCAATAGTGGAAATTAGCTATTTGTTTTGTGTTTGAGTTCTTAATTTTAACATGTCAGAATGCTTTTATGCATATACAATGTTGAAGCTGTTAACTTATCACAATGAATTTTAGAACCTCTTTACATACATCGTCAAAGTTGTTACCTTTTTGGGAGAGAAAGAAGAGTCGCGGACATACCTACTGATCATCCGTCCTGCAGCAAGCAACATGCTGTCATCCAGTTTCGGTAGATCTGTTGTTAGCGGTTATGTTTTCCTTGATGTTGATGGAATAGCATGTAATCCCCCATTTAAGCAAAATTTTGTTTTGGTATCTTGTAGGCAAGTAGAAAAGGAGAAGTCTGATGGTACAATGTCGAAGCAAGTAAGGTAAGAATATGCCATGATCAACGTGACAGGAATTTTTCCAATCTCAGATGAGCCGATTCTTATGTATTTTTGTATTGGTAGGCCTTATTTGATGGATCTAGGAAGCACAAATAAGACTTATATCAACGTAAGCAACACTTTTTCATCCATCTTTTTGTAGGTTATAGTCTTACTCATTTCATGATTCTTTTTATAATGTAATTGCATTTGCAGGAATCTGCAATTGAACCTCAACGTTACTATGAACTTTTTGAAAAAGACACTCTGAAGTTTGGCAATAGTAGGTAAGATTGTAGACCGTGTCTTGAATTTTCATTTTGTGTTTTAAATTCATTATGGTTTTTCTACCTCCATTGATAATTTAGACAGTTCGACTGGACAATCTTTTGATTTTCTTGATAAACAGTTCTCGGCATGCAACTTCTTGCTGATTCTATACTTTATTTACTTATACGACATCTTACCTAAATTACAAGTTTATCATGTGAACTTGTTAAGCAATCTTCTTTTTCGATTTAGAGTAATCGAGCTCAATTGTTAAAAACGATGATGGGAATCGTCATTAGGTCCTTAACGGAGTAGATCCCAATAGTATAAGGATCTGAAAAATACTGCTGAATTTTCTTTTCTTTGATGGTTTGTTGTTGATGCATCCTGTAAATTTACTGCATTCATATTTATTGATTTATTTCTTATTTTTGCAGTCGAGAATATGTATTGTTGCATGAGAAGTCAGCTGGATGATAAGCCTCAAATTCAATTCAGTGTGTCAGTCAATTCGTCCAGTTCGAGGCCTTAGAGATGTTTCCATCATCAGGATGTCGTGAGTAATTGACCAACCATTCTAGATTTGTCTTTGTAATCAATATCTTCAAAGAAAGTATTTTTATGCTGTATGTCCTATTAAACCATGTCTTGAACTGAAAAATTATGCATTTTGAAGTCTTTTAATGGTAAAATTTTGATTGCTCTTGACTACCTTCGTTCTTGCATCTCATAAATGTAGATCAATAAGCCGCACTTCTTTTTTTTTTTCTTTTTTTTTGACCGTGATGAT GATTCAGAATCTCCAATTAGGGTGAGGCAGTCTTCTCCTAGAAGGAGTCCGTCCCGCAGAGGAAGGTCACCTACACGGCACAAGAGCTCCTGTAATAGCAGTTCTCCAGCAAGAGACAAACATTCTAGTCATGCTAAATCTCCAAAGCATAAGAGGTCAAGTTCTCCACGAACTCGATCTCCTTCTCCAAGGACAAAACGGTTGAGGAGAGCTGCTGAAAGAGCTCCAGAGAAATCAAGTGATAGAGATTCTGAAAGGAACCGTGGCAGGGGTAATGATAAAGAAGCTCATCGGGAAAGGGTTTCTGATAGGGAATTAGGGAGCGAGAGAAAGGAGAGGAGTTCTAGACAGGATGTTAAGGATGGAAAATCTTCCAGGTCAAGACATGGGAATTCTTCTTCTCCATCAGAACGCCACCATAGGAGCCGCCACAGGTCCCCATCGCCCCAGCCTGTCTCTGATGCCAAAAATCATGATGAGGGGAGAAATTCAAGAAGGGCTGAAAGCCGGAGTGATGACGATGATTCAGTGGCAAAGATGAAGGCTGCGGAGGAAGCCTTAGAAGCTAAGCAGAAGGACAAACCTTCTTTTGAGCTATCCGGGAAGCTTGCAGCAGAAACTAATAGAGTAAGAGGTATTACGTTGCTGTTTAATGAACCTCCAGATGCTAGAAAACCTGATGTAAGATGGCGGCTGTATGTTTTTAAGGCTGGAGAAGTGCTGAATGAACCTCTTTACATACATCGTCAAAGTTGTTACCTTTTTGGGAGAGAAAGAAGAGTCGCGGACATACCTACTGATCATCCGTCCTGCAGCAAGCAACATGCTGTCATCCAGTTTCGGCAAGTAGAAAAGGAGAAGTCTGATGGTACAATGTCGAAGCAAGTAAGGCCTTATTTGATGGATCTAGGAAGCACAAATAAGACTTATATCAACGAATCTGCAATTGAACCTCAACGTTACTATGAACTTTTTGAAAAAGACACTCTGAAGTTTGGCAATAGTAGTCGAGAATATGTATTGTTGCATGAGAAGTCAGCTGGATGATAAGCCTCAAATTCAATTCAGTGTGTCAGTCAATTCGTCCAGTTCGAGGCCTTAGAGATGTTTCCATCATCAGGATGTCGTGAGTAATTGACCAACCATTCTAGATTTGTCTTTGTAATCAATATCTTCAAAGAAAGTATTTTTATGCTGTATGTCCTATTAAACCATGTCTTGAACTGAAAAATTATGCATTTTGAAGTCTTTTAATGGTAAAATTTTGATTGCTCTTGACTACCTTCGTTCTTGCATCTCATAAATGTAGATCAATAAGCCGCACTTCTTTTTTTTTTTCTTTTTTTTTGACCGTGATGAT GATTCAGAATCTCCAATTAGGGTGAGGCAGTCTTCTCCTAGAAGGAGTCCGTCCCGCAGAGGAAGGTCACCTACACGGCACAAGAGCTCCTGTAATAGCAGTTCTCCAGCAAGAGACAAACATTCTAGTCATGCTAAATCTCCAAAGCATAAGAGGTCAAGTTCTCCACGAACTCGATCTCCTTCTCCAAGGACAAAACGGTTGAGGAGAGCTGCTGAAAGAGCTCCAGAGAAATCAAGTGATAGAGATTCTGAAAGGAACCGTGGCAGGGGTAATGATAAAGAAGCTCATCGGGAAAGGGTTTCTGATAGGGAATTAGGGAGCGAGAGAAAGGAGAGGAGTTCTAGACAGGATGTTAAGGATGGAAAATCTTCCAGGTCAAGACATGGGAATTCTTCTTCTCCATCAGAACGCCACCATAGGAGCCGCCACAGGTCCCCATCGCCCCAGCCTGTCTCTGATGCCAAAAATCATGATGAGGGGAGAAATTCAAGAAGGGCTGAAAGCCGGAGTGATGACGATGATTCAGTGGCAAAGATGAAGGCTGCGGAGGAAGCCTTAGAAGCTAAGCAGAAGGACAAACCTTCTTTTGAGCTATCCGGGAAGCTTGCAGCAGAAACTAATAGAGTAAGAGGTATTACGTTGCTGTTTAATGAACCTCCAGATGCTAGAAAACCTGATGTAAGATGGCGGCTGTATGTTTTTAAGGCTGGAGAAGTGCTGAATGAACCTCTTTACATACATCGTCAAAGTTGTTACCTTTTTGGGAGAGAAAGAAGAGTCGCGGACATACCTACTGATCATCCGTCCTGCAGCAAGCAACATGCTGTCATCCAGTTTCGGCAAGTAGAAAAGGAGAAGTCTGATGGTACAATGTCGAAGCAAGTAAGGCCTTATTTGATGGATCTAGGAAGCACAAATAAGACTTATATCAACGAATCTGCAATTGAACCTCAACGTTACTATGAACTTTTTGAAAAAGACACTCTGAAGTTTGGCAATAGTAGTCGAGAATATGTATTGTTGCATGAGAAGTCAGCTGGATGA DSESPIRVRQSSPRRSPSRRGRSPTRHKSSCNSSSPARDKHSSHAKSPKHKRSSSPRTRSPSPRTKRLRRAAERAPEKSSDRDSERNRGRGNDKEAHRERVSDRELGSERKERSSRQDVKDGKSSRSRHGNSSSPSERHHRSRHRSPSPQPVSDAKNHDEGRNSRRAESRSDDDDSVAKMKAAEEALEAKQKDKPSFELSGKLAAETNRVRGITLLFNEPPDARKPDVRWRLYVFKAGEVLNEPLYIHRQSCYLFGRERRVADIPTDHPSCSKQHAVIQFRQVEKEKSDGTMSKQVRPYLMDLGSTNKTYINESAIEPQRYYELFEKDTLKFGNSSREYVLLHEKSAG
BLAST of Carg12807 vs. NCBI nr
Match: XP_022937398.1 (FHA domain-containing protein DDL [Cucurbita moschata]) HSP 1 Score: 396.0 bits (1016), Expect = 1.3e-106 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of Carg12807 vs. NCBI nr
Match: XP_022976537.1 (FHA domain-containing protein DDL [Cucurbita maxima]) HSP 1 Score: 391.7 bits (1005), Expect = 2.5e-105 Identity = 196/198 (98.99%), Postives = 196/198 (98.99%), Query Frame = 0
BLAST of Carg12807 vs. NCBI nr
Match: XP_023536107.1 (FHA domain-containing protein DDL [Cucurbita pepo subsp. pepo]) HSP 1 Score: 389.8 bits (1000), Expect = 9.7e-105 Identity = 195/198 (98.48%), Postives = 195/198 (98.48%), Query Frame = 0
BLAST of Carg12807 vs. NCBI nr
Match: XP_022139625.1 (FHA domain-containing protein DDL [Momordica charantia] >XP_022139626.1 FHA domain-containing protein DDL [Momordica charantia]) HSP 1 Score: 373.6 bits (958), Expect = 7.2e-100 Identity = 184/195 (94.36%), Postives = 193/195 (98.97%), Query Frame = 0
BLAST of Carg12807 vs. NCBI nr
Match: XP_008454522.1 (PREDICTED: FHA domain-containing protein DDL [Cucumis melo] >XP_008454523.1 PREDICTED: FHA domain-containing protein DDL [Cucumis melo] >XP_008454524.1 PREDICTED: FHA domain-containing protein DDL [Cucumis melo]) HSP 1 Score: 369.0 bits (946), Expect = 1.8e-98 Identity = 182/190 (95.79%), Postives = 189/190 (99.47%), Query Frame = 0
BLAST of Carg12807 vs. TAIR10
Match: AT3G20550.1 (SMAD/FHA domain-containing protein ) HSP 1 Score: 302.0 bits (772), Expect = 4.8e-82 Identity = 144/172 (83.72%), Postives = 158/172 (91.86%), Query Frame = 0
BLAST of Carg12807 vs. TAIR10
Match: AT2G24410.1 (BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT3G20550.1)) HSP 1 Score: 92.8 bits (229), Expect = 4.4e-19 Identity = 45/65 (69.23%), Postives = 48/65 (73.85%), Query Frame = 0
BLAST of Carg12807 vs. TAIR10
Match: AT5G38840.1 (SMAD/FHA domain-containing protein ) HSP 1 Score: 68.6 bits (166), Expect = 8.9e-12 Identity = 43/156 (27.56%), Postives = 82/156 (52.56%), Query Frame = 0
BLAST of Carg12807 vs. TAIR10
Match: AT1G34355.1 (forkhead-associated (FHA) domain-containing protein ) HSP 1 Score: 42.0 bits (97), Expect = 9.0e-04 Identity = 25/79 (31.65%), Postives = 41/79 (51.90%), Query Frame = 0
BLAST of Carg12807 vs. Swiss-Prot
Match: sp|Q8W4D8|DDL_ARATH (FHA domain-containing protein DDL OS=Arabidopsis thaliana OX=3702 GN=DDL PE=1 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 8.7e-81 Identity = 144/172 (83.72%), Postives = 158/172 (91.86%), Query Frame = 0
BLAST of Carg12807 vs. Swiss-Prot
Match: sp|Q8TAD8|SNIP1_HUMAN (Smad nuclear-interacting protein 1 OS=Homo sapiens OX=9606 GN=SNIP1 PE=1 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 9.0e-54 Identity = 102/159 (64.15%), Postives = 122/159 (76.73%), Query Frame = 0
BLAST of Carg12807 vs. Swiss-Prot
Match: sp|Q8BIZ6|SNIP1_MOUSE (Smad nuclear-interacting protein 1 OS=Mus musculus OX=10090 GN=Snip1 PE=1 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.2e-53 Identity = 101/155 (65.16%), Postives = 121/155 (78.06%), Query Frame = 0
BLAST of Carg12807 vs. Swiss-Prot
Match: sp|Q5M9G6|SNIP1_RAT (Smad nuclear interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Snip1 PE=1 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 2.6e-53 Identity = 106/179 (59.22%), Postives = 128/179 (71.51%), Query Frame = 0
BLAST of Carg12807 vs. Swiss-Prot
Match: sp|Q54VU4|Y8013_DICDI (Probable serine/threonine-protein kinase DDB_G0280133 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0280133 PE=3 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 4.8e-31 Identity = 73/174 (41.95%), Postives = 105/174 (60.34%), Query Frame = 0
BLAST of Carg12807 vs. TrEMBL
Match: tr|A0A1S3BYC0|A0A1S3BYC0_CUCME (FHA domain-containing protein DDL OS=Cucumis melo OX=3656 GN=LOC103494918 PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 1.2e-98 Identity = 182/190 (95.79%), Postives = 189/190 (99.47%), Query Frame = 0
BLAST of Carg12807 vs. TrEMBL
Match: tr|A0A0A0LD88|A0A0A0LD88_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G426330 PE=4 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 4.4e-98 Identity = 181/190 (95.26%), Postives = 188/190 (98.95%), Query Frame = 0
BLAST of Carg12807 vs. TrEMBL
Match: tr|A0A059BM45|A0A059BM45_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F00968 PE=4 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 4.4e-90 Identity = 164/198 (82.83%), Postives = 184/198 (92.93%), Query Frame = 0
BLAST of Carg12807 vs. TrEMBL
Match: tr|A0A067L3K1|A0A067L3K1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_00837 PE=4 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 1.3e-89 Identity = 169/199 (84.92%), Postives = 181/199 (90.95%), Query Frame = 0
BLAST of Carg12807 vs. TrEMBL
Match: tr|A0A2G3BCC1|A0A2G3BCC1_CAPCH (Smad nuclear-interacting protein 1 OS=Capsicum chinense OX=80379 GN=BC332_24960 PE=4 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 2.2e-89 Identity = 163/196 (83.16%), Postives = 180/196 (91.84%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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