Carg12782 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12782
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	DUF538 family protein
Location	Cucurbita_argyrosperma_scaffold_043 : 236221 .. 237999 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGACTTGTTTGGCAGCTGGAATTCCCGAATTCGGATCTCGATTATCATCTTGTTTGTGGGTTTCTGTTCTTCCTGTTGCTGCAGCAATTCTCGCAAAGATTCGTCTTCTATTCACTCGCTCCTGCGCTCCATGGGGCTGCCGGCAGGGCTGGTGCCCAAGCAAGTGAAATCTTACACATTGGGTGAAAATGATCGGCTGGAAGTGTACTTGGATGGGCCATGTATGGCCAAATATGAAAACAGAGTGATTTTTGAAAGTGTTTTTAGTGCTAATCTTAGCTATGGGAGCTTGATTGGAGTGGAGGGTATGTCTCAGGAAGAGCTCTTTCTATGGCTGCCGGTTAAGGATATCATTGTTAATGATCCTTCTTCTGGTGTCATTCTTATTGATATTGGTGTCGCGCATAAACAGCTCTCTTTGTCTCTCTTTGAAGATCCTCCTGATTGTAACCCTCAAGGTGAATTTTCACTTAGATCTCTTTTGATTTTTGTTGGGTTTTGATTCTTTTTGTTGATCTTCCATTAATGGCTTCTCTTGGGTCTGTTTGTTTTTGTTGATCTTTGGGCTCATCCATGGCTTCTTTTGGCTCTGTTTCCTCTGTTTTGGCATTTGCTGCTACTTCTTGTGTTTCTGCTATCATCAATGGCTTCTCATGGCTTTGTTTCCTCTGTTTTTGGCTTGGCTACGTCTTTATTTCGTCTCTGATTCACTCTAAATTGATGGGTTCTTCTTATTTTTCATCGTTTTTCTCATTCATGGCTTATTTTGGCTCTGTTTCCTCTGTTTTAGCATTTGCTGCTACTTCTAGTGTTTCTTATCTCATAAATGGCTTCTCATGGCTTTGTTTCCTCTGTTTTTTTCTTGGCTACATCGTTATTTCCTTTCTGATTCACTCTAACTTGATGGGTTCTTCTTATTTTTCATTGTTTTTCTCATAAATGGCTTCTCATGGCGTTGTTTCCTCTGTTTTTGCCTTGGCTACCTCTTTTCTTTGATGGGTTCTTCTTACTTTTCATCGTTTTTCTCATCCATGGCTTCTTTTAGCTCTGTTTTCCTCTGTTTCTTATGAACTCTGTCACTAACATTCATCATTTTTCTGTAAATTGCTGGGTTCTGTTTCCATTTTTTCCCCTCACAAATGGGTTAATTTTGATCTTGTTTTATCTTACTTGAATCCATTCCTCTGGCTTTAATTTAGCTTCTCAATGAACTGTTCTGTTGCTCTGCCTTCCTCTCTCTAGATTGGTTCCTTTCTTCATCTCTTTTCCTTCATTAATGGCTTCCCTAGCCGCCATTAATGGCTTCTTCTTCTTCTCTGTAAATCAATATTTCGAGTTCATTGTTTTAGACAGAGAGATAGAGATCTGTTCTTGTTTTGTTTCTTTCCATGTCTGAGTTTCTTTGTGTCTGGTTTTTTGCAGCTGCACTGAGGAATCCTCTGAGGAAGAGAAGAGACTTTGAATCTCTTAGATAAGAGGGCCAAAAAAAAAAAACAATGTGAAATTCAAGTTTCCAACTTTTGTATTTATATTATTTTGTTGCAATAATTTTATTTTTAACTTTATAAAGAAATCATTTGTCACACTTTAGTGTATAATGAGAGCTTGTGTGGTGAAATTTTGGAATTAAAAACATCTTTTGATGTGTGTATCGTCGTCGGTCTCACGGTTTTAAATTACGTATGTTACGGAAAGGTTTTTATACCCTTATAAGGAATGTTTCGTTCTTCTTCTCTCCGTGAAATATCACAATCCACCCCCTTGGGGACCTAAC

mRNA sequence

ATGGCCGACTTGTTTGGCAGCTGGAATTCCCGAATTCGGATCTCGATTATCATCTTGTTTGTGGGTTTCTGTTCTTCCTGTTGCTGCAGCAATTCTCGCAAAGATTCGTCTTCTATTCACTCGCTCCTGCGCTCCATGGGGCTGCCGGCAGGGCTGGTGCCCAAGCAAGTGAAATCTTACACATTGGGTGAAAATGATCGGCTGGAAGTGTACTTGGATGGGCCATGTATGGCCAAATATGAAAACAGAGTGATTTTTGAAAGTGTTTTTAGTGCTAATCTTAGCTATGGGAGCTTGATTGGAGTGGAGGGTATGTCTCAGGAAGAGCTCTTTCTATGGCTGCCGGTTAAGGATATCATTGTTAATGATCCTTCTTCTGGTGTCATTCTTATTGATATTGGTGTCGCGCATAAACAGCTCTCTTTGTCTCTCTTTGAAGATCCTCCTGATTGTAACCCTCAAGCTGCACTGAGGAATCCTCTGAGGAAGAGAAGAGACTTTGAATCTCTTAGATAAGAGGGCCAAAAAAAAAAAACAATGTGAAATTCAAGTTTCCAACTTTTGTATTTATATTATTTTGTTGCAATAATTTTATTTTTAACTTTATAAAGAAATCATTTGTCACACTTTAGTGTATAATGAGAGCTTGTGTGGTGAAATTTTGGAATTAAAAACATCTTTTGATGTGTGTATCGTCGTCGGTCTCACGGTTTTAAATTACGTATGTTACGGAAAGGTTTTTATACCCTTATAAGGAATGTTTCGTTCTTCTTCTCTCCGTGAAATATCACAATCCACCCCCTTGGGGACCTAAC

Coding sequence (CDS)

ATGGCCGACTTGTTTGGCAGCTGGAATTCCCGAATTCGGATCTCGATTATCATCTTGTTTGTGGGTTTCTGTTCTTCCTGTTGCTGCAGCAATTCTCGCAAAGATTCGTCTTCTATTCACTCGCTCCTGCGCTCCATGGGGCTGCCGGCAGGGCTGGTGCCCAAGCAAGTGAAATCTTACACATTGGGTGAAAATGATCGGCTGGAAGTGTACTTGGATGGGCCATGTATGGCCAAATATGAAAACAGAGTGATTTTTGAAAGTGTTTTTAGTGCTAATCTTAGCTATGGGAGCTTGATTGGAGTGGAGGGTATGTCTCAGGAAGAGCTCTTTCTATGGCTGCCGGTTAAGGATATCATTGTTAATGATCCTTCTTCTGGTGTCATTCTTATTGATATTGGTGTCGCGCATAAACAGCTCTCTTTGTCTCTCTTTGAAGATCCTCCTGATTGTAACCCTCAAGCTGCACTGAGGAATCCTCTGAGGAAGAGAAGAGACTTTGAATCTCTTAGATAA

Protein sequence

MADLFGSWNSRIRISIIILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKSYTLGENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDIIVNDPSSGVILIDIGVAHKQLSLSLFEDPPDCNPQAALRNPLRKRRDFESLR

Homology

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BLAST of Carg12782 vs. NCBI nr
Match: XP_022976596.1 (uncharacterized protein LOC111476944 [Cucurbita maxima])

HSP 1 Score: 347.1 bits (889), Expect = 3.5e-92
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MADLFGSWNSRIRISIIILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKSY 60
           MADLFGSWNSRIRISIIILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKSY
Sbjct: 1   MADLFGSWNSRIRISIIILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKSY 60

Query: 61  TLGENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDII 120
           TLGENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDII
Sbjct: 61  TLGENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDII 120

Query: 121 VNDPSSGVILIDIGVAHKQLSLSLFEDPPDCNPQAALRNPLRKRRDFESLR 172
           VNDPSSGVILIDIGVAHKQLSLSLFEDPPDCNPQAALRNPLRKRRDFESLR
Sbjct: 121 VNDPSSGVILIDIGVAHKQLSLSLFEDPPDCNPQAALRNPLRKRRDFESLR 171

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BLAST of Carg12782 vs. NCBI nr
Match: XP_022937405.1 (uncharacterized protein LOC111443705 [Cucurbita moschata])

HSP 1 Score: 345.9 bits (886), Expect = 7.9e-92
Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MADLFGSWNSRIRISIIILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKSY 60
           MADLFGSWNSRIRISIIILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKSY
Sbjct: 1   MADLFGSWNSRIRISIIILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKSY 60

Query: 61  TLGENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDII 120
           TLGENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGV+GMSQEELFLWLPVKDII
Sbjct: 61  TLGENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVQGMSQEELFLWLPVKDII 120

Query: 121 VNDPSSGVILIDIGVAHKQLSLSLFEDPPDCNPQAALRNPLRKRRDFESLR 172
           VNDPSSGVILIDIGVAHKQLSLSLFEDPPDCNPQAALRNPLRKRRDFESLR
Sbjct: 121 VNDPSSGVILIDIGVAHKQLSLSLFEDPPDCNPQAALRNPLRKRRDFESLR 171

[Close]

BLAST of Carg12782 vs. NCBI nr
Match: XP_023535139.1 (uncharacterized protein LOC111796654 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342.0 bits (876), Expect = 1.1e-90
Identity = 169/171 (98.83%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MADLFGSWNSRIRISIIILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKSY 60
           MADLFGSWNSRIRISIIILFVGFCSSCCCSNS KDSSSIHSLLRSMGLPAGLVPKQVKSY
Sbjct: 1   MADLFGSWNSRIRISIIILFVGFCSSCCCSNSPKDSSSIHSLLRSMGLPAGLVPKQVKSY 60

Query: 61  TLGENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDII 120
           TLGENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDII
Sbjct: 61  TLGENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDII 120

Query: 121 VNDPSSGVILIDIGVAHKQLSLSLFEDPPDCNPQAALRNPLRKRRDFESLR 172
           VNDPSSGVILIDIGVAHKQLSLSLFEDPPDCNPQAAL NPLRKRRDFESLR
Sbjct: 121 VNDPSSGVILIDIGVAHKQLSLSLFEDPPDCNPQAALTNPLRKRRDFESLR 171

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BLAST of Carg12782 vs. NCBI nr
Match: XP_004151974.1 (PREDICTED: uncharacterized protein LOC101218420 [Cucumis sativus] >KGN57940.1 hypothetical protein Csa_3G399960 [Cucumis sativus])

HSP 1 Score: 265.0 bits (676), Expect = 1.8e-67
Identity = 139/172 (80.81%), Postives = 148/172 (86.05%), Query Frame = 0


Query: 1   MADLFGSWNSRIRISI-IILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKS 60
           M  LFG    RI+ISI IIL +G CS+C      +DSSSIHSLLRSMG PAGLVPKQ KS
Sbjct: 1   MGTLFG----RIQISILIILLMGLCSNCV-----EDSSSIHSLLRSMGPPAGLVPKQAKS 60

Query: 61  YTLGENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDI 120
           YTL EN RLEVYLD PCMAKYENRVIF++VFSANLSYGSLIGVEGMSQEELFLWLPVKDI
Sbjct: 61  YTLAENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSLIGVEGMSQEELFLWLPVKDI 120

Query: 121 IVNDPSSGVILIDIGVAHKQLSLSLFEDPPDCNPQAALRNPLRKRRDFESLR 172
           IVN P+SGVILIDIGVAHKQLSLSLFEDPPDCNPQ  LRNPLR++R FESLR
Sbjct: 121 IVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQVTLRNPLRRQRGFESLR 163

[Close]

BLAST of Carg12782 vs. NCBI nr
Match: XP_008454610.1 (PREDICTED: uncharacterized protein LOC103494976 [Cucumis melo])

HSP 1 Score: 264.6 bits (675), Expect = 2.3e-67
Identity = 138/172 (80.23%), Postives = 149/172 (86.63%), Query Frame = 0


Query: 1   MADLFGSWNSRIRISI-IILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKS 60
           M  LFG    RI+ISI IIL +G CS+C      ++SSSIHSLLRSMGLPAGLVPKQ KS
Sbjct: 1   MGTLFG----RIQISILIILLMGLCSNCV-----QNSSSIHSLLRSMGLPAGLVPKQAKS 60

Query: 61  YTLGENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDI 120
           YTL +N RLEVYLD PCMAKYENRVIF++VFSANLSYGSLIGVEGMSQEELFLWLPVKDI
Sbjct: 61  YTLAQNGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSLIGVEGMSQEELFLWLPVKDI 120

Query: 121 IVNDPSSGVILIDIGVAHKQLSLSLFEDPPDCNPQAALRNPLRKRRDFESLR 172
           IVN P+SGVILIDIGVAHKQLSLSLFEDPPDCNPQ  LRNPLR++R FESLR
Sbjct: 121 IVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQVTLRNPLRRQRGFESLR 163

[Close]

BLAST of Carg12782 vs. TAIR10
Match: AT5G54530.1 (Protein of unknown function, DUF538)

HSP 1 Score: 175.6 bits (444), Expect = 2.6e-44
Identity = 82/132 (62.12%), Postives = 103/132 (78.03%), Query Frame = 0


Query: 38  SIHSLLRSMGLPAGLVPKQVKSYTLGENDRLEVYLDGPCMAKYENRVIFESVFSANLSYG 97
           ++H +LRS GLPAGL+P++V SY L  + RLEV+L  PC AK+E  V FE+V   NLSYG
Sbjct: 28  TVHDVLRSEGLPAGLLPQEVDSYILHNDGRLEVFLAAPCYAKFETNVHFEAVVRGNLSYG 87

Query: 98  SLIGVEGMSQEELFLWLPVKDIIVNDPSSGVILIDIGVAHKQLSLSLFEDPPDCNPQAAL 157
           SL+GVEG+SQ+ELFLWL VKDI+V +P+SGVI+ DIGVA KQLSLSLFEDPP C P   L
Sbjct: 88  SLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQLSLSLFEDPPKCKPDGVL 147

Query: 158 RNPLRKRRDFES 170
           +  +R+ R FE+
Sbjct: 148 KKKMRRDRGFEA 159

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BLAST of Carg12782 vs. TAIR10
Match: AT1G61667.1 (Protein of unknown function, DUF538)

HSP 1 Score: 163.3 bits (412), Expect = 1.3e-40
Identity = 78/130 (60.00%), Postives = 96/130 (73.85%), Query Frame = 0


Query: 37  SSIHSLLRSMGLPAGLVPKQVKSYTLGE-NDRLEVYLDGPCMAKYENRVIFESVFSANLS 96
           SSI +LL + GLP GL P  V+SY+L +    LEV L  PC A++ENRV F+ V  ANLS
Sbjct: 20  SSIRNLLEARGLPGGLFPDNVESYSLDDKTGELEVQLQNPCFARFENRVYFDRVIKANLS 79

Query: 97  YGSLIGVEGMSQEELFLWLPVKDIIVNDPSSGVILIDIGVAHKQLSLSLFEDPPDCNPQA 156
           YG L+G+EG++QEELFLWLPVK I VNDPSSG++L DIGVAHKQ+S SLFEDPP C P  
Sbjct: 80  YGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGLVLFDIGVAHKQISRSLFEDPPVCYPPG 139

Query: 157 ALRNPLRKRR 166
           ++   L K +
Sbjct: 140 SIMEKLEKSK 149

[Close]

BLAST of Carg12782 vs. TAIR10
Match: AT3G07460.2 (Protein of unknown function, DUF538)

HSP 1 Score: 117.5 bits (293), Expect = 8.2e-27
Identity = 57/118 (48.31%), Postives = 76/118 (64.41%), Query Frame = 0


Query: 35  DSSSIHSLLRSMGLPAGLVPKQVKSYTL-GENDRLEVYLDGPCMAKYENRVIFESVFSAN 94
           ++ SI  +L + GLP GL PK VK +T+ GE  R  VYL+  C AKYE  + ++ + S  
Sbjct: 26  ENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETELHYDEIVSGT 85

Query: 95  LSYGSLIGVEGMSQEELFLWLPVKDIIVNDPSSGVILIDIGVAHKQLSLSLFEDPPDC 152
           + Y  +  + G+S +ELFLWL VK I V+ PSSG+I  D+GV  KQ SLSLFE P DC
Sbjct: 86  IGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRDC 143

[Close]

BLAST of Carg12782 vs. TAIR10
Match: AT3G07470.1 (Protein of unknown function, DUF538)

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-24
Identity = 55/141 (39.01%), Postives = 83/141 (58.87%), Query Frame = 0


Query: 14  ISIIILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKSYTLG-ENDRLEVYL 73
           + I  L +   +    S +  ++ +I+ +L + GLP+G+ PK V+ +T   E  R  VYL
Sbjct: 6   VQIAFLCLVLVAGISISTAISETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYL 65

Query: 74  DGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDIIVNDPSSGVILID 133
           +  C AKYE  + +++  +  +    +  + G+S +ELFLW PVK I V+ PSSG+I  D
Sbjct: 66  NQACEAKYETEIHYDANITGTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFD 125

Query: 134 IGVAHKQLSLSLFEDPPDCNP 154
           +GV  KQ SLSLFE P DC P
Sbjct: 126 VGVVRKQYSLSLFETPRDCVP 146

[Close]

BLAST of Carg12782 vs. TAIR10
Match: AT5G16380.1 (Protein of unknown function, DUF538)

HSP 1 Score: 104.8 bits (260), Expect = 5.5e-23
Identity = 67/156 (42.95%), Postives = 88/156 (56.41%), Query Frame = 0


Query: 18  ILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKSYTLG-ENDRLEVYLDGPC 77
           ++ V F S      S     S +  LR   LPAG+VPK V ++++  +  R  V L  PC
Sbjct: 10  LIIVLFSSILFPQLSSLPDPSFYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVALPVPC 69

Query: 78  MAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDIIVNDPSSGVILIDIGVA 137
            AK+EN+  F+   S  LS G +  + G++Q+ELFLW  VK I V+  SSG+I  D+GVA
Sbjct: 70  DAKFENQFHFDYNISGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDVGVA 129

Query: 138 HKQLSLSLFEDPPDCNPQAALRNP----LRKRRDFE 169
            KQLSLSLFE P DC   AA   P    L + RD E
Sbjct: 130 DKQLSLSLFESPRDCT--AAESQPRAVDLSRPRDLE 163

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BLAST of Carg12782 vs. TrEMBL
Match: tr|A0A0A0L7K3|A0A0A0L7K3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G399960 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.2e-67
Identity = 139/172 (80.81%), Postives = 148/172 (86.05%), Query Frame = 0


Query: 1   MADLFGSWNSRIRISI-IILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKS 60
           M  LFG    RI+ISI IIL +G CS+C      +DSSSIHSLLRSMG PAGLVPKQ KS
Sbjct: 1   MGTLFG----RIQISILIILLMGLCSNCV-----EDSSSIHSLLRSMGPPAGLVPKQAKS 60

Query: 61  YTLGENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDI 120
           YTL EN RLEVYLD PCMAKYENRVIF++VFSANLSYGSLIGVEGMSQEELFLWLPVKDI
Sbjct: 61  YTLAENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSLIGVEGMSQEELFLWLPVKDI 120

Query: 121 IVNDPSSGVILIDIGVAHKQLSLSLFEDPPDCNPQAALRNPLRKRRDFESLR 172
           IVN P+SGVILIDIGVAHKQLSLSLFEDPPDCNPQ  LRNPLR++R FESLR
Sbjct: 121 IVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQVTLRNPLRRQRGFESLR 163

[Close]

BLAST of Carg12782 vs. TrEMBL
Match: tr|A0A1S3BZT2|A0A1S3BZT2_CUCME (uncharacterized protein LOC103494976 OS=Cucumis melo OX=3656 GN=LOC103494976 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.5e-67
Identity = 138/172 (80.23%), Postives = 149/172 (86.63%), Query Frame = 0


Query: 1   MADLFGSWNSRIRISI-IILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKS 60
           M  LFG    RI+ISI IIL +G CS+C      ++SSSIHSLLRSMGLPAGLVPKQ KS
Sbjct: 1   MGTLFG----RIQISILIILLMGLCSNCV-----QNSSSIHSLLRSMGLPAGLVPKQAKS 60

Query: 61  YTLGENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDI 120
           YTL +N RLEVYLD PCMAKYENRVIF++VFSANLSYGSLIGVEGMSQEELFLWLPVKDI
Sbjct: 61  YTLAQNGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSLIGVEGMSQEELFLWLPVKDI 120

Query: 121 IVNDPSSGVILIDIGVAHKQLSLSLFEDPPDCNPQAALRNPLRKRRDFESLR 172
           IVN P+SGVILIDIGVAHKQLSLSLFEDPPDCNPQ  LRNPLR++R FESLR
Sbjct: 121 IVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQVTLRNPLRRQRGFESLR 163

[Close]

BLAST of Carg12782 vs. TrEMBL
Match: tr|A0A1R3IDB2|A0A1R3IDB2_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_12931 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 7.3e-54
Identity = 112/175 (64.00%), Postives = 134/175 (76.57%), Query Frame = 0


Query: 1   MADLFGSWNSRI----RISIIILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQ 60
           MA LF S   R     RI+++  F+ F S    S++   SSSIH LL S GLPAGL+PK+
Sbjct: 1   MAALFSSKKPRFYYITRINLVFFFIIFVS---FSSTLSSSSSIHDLLVSRGLPAGLLPKE 60

Query: 61  VKSYTLGENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPV 120
           VKSYTL EN  LEV+LD PC+ KYENRVIF+SV  ANL+YGSLIGV G++QEELFLWLPV
Sbjct: 61  VKSYTLSENGTLEVFLDEPCLTKYENRVIFDSVVRANLTYGSLIGVVGLTQEELFLWLPV 120

Query: 121 KDIIVNDPSSGVILIDIGVAHKQLSLSLFEDPPDCNPQAALRNPLRKRRDFESLR 172
           KDIIV+DP SG+IL DIGVAHKQLSLSLFE+PP C PQ  L+N +RK + FE++R
Sbjct: 121 KDIIVDDPKSGLILFDIGVAHKQLSLSLFEEPPTCKPQGLLKNDVRKEKGFEAMR 172

[Close]

BLAST of Carg12782 vs. TrEMBL
Match: tr|A0A061F5S5|A0A061F5S5_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_031177 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.6e-53
Identity = 109/168 (64.88%), Postives = 131/168 (77.98%), Query Frame = 0


Query: 5   FGSWNSRIRIS-IIILFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKSYTLG 64
           F S  SR+ ++ ++  F+ FCS          SSSIH LL S GLPAGL+PK+VKSYTL 
Sbjct: 4   FSSNQSRVYLTRLLWFFIFFCSLTL------SSSSIHDLLVSRGLPAGLLPKEVKSYTLS 63

Query: 65  ENDRLEVYLDGPCMAKYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDIIVND 124
           EN  LEV+LDGPC+ KYENRV F+SV  ANL+YGSLIGV G++QEELFLWLPVKDIIV+D
Sbjct: 64  ENGTLEVFLDGPCLTKYENRVFFDSVVRANLTYGSLIGVVGLTQEELFLWLPVKDIIVDD 123

Query: 125 PSSGVILIDIGVAHKQLSLSLFEDPPDCNPQAALRNPLRKRRDFESLR 172
           P SG+IL DIGVAHKQLSLSLFE+PPDC PQ  L+N +RK + FE++R
Sbjct: 124 PKSGLILFDIGVAHKQLSLSLFEEPPDCKPQGMLKNHVRKEKGFEAVR 165

[Close]

BLAST of Carg12782 vs. TrEMBL
Match: tr|V7AIF5|V7AIF5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G146900g PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.2e-51
Identity = 103/153 (67.32%), Postives = 118/153 (77.12%), Query Frame = 0


Query: 19  LFVGFCSSCCCSNSRKDSSSIHSLLRSMGLPAGLVPKQVKSYTLGENDRLEVYLDGPCMA 78
           LFV        S S   S SIH LLRS GLP GL+P++VKSYT  +N  LEV+LD PCM 
Sbjct: 13  LFVFLSLQLYLSFSSSSSPSIHDLLRSKGLPPGLLPEEVKSYTFSQNGHLEVFLDAPCMT 72

Query: 79  KYENRVIFESVFSANLSYGSLIGVEGMSQEELFLWLPVKDIIVNDPSSGVILIDIGVAHK 138
           KYENRV+FE VF+ANL+YGSLIGVEG+ QEELF+WLPVKDIIVNDPSSG+IL DIG+AHK
Sbjct: 73  KYENRVLFEQVFTANLTYGSLIGVEGLQQEELFVWLPVKDIIVNDPSSGLILFDIGLAHK 132

Query: 139 QLSLSLFEDPPDCNPQAALRNPLRKRRDFESLR 172
           Q SLSLFEDPP C P+  LRN +RK +  E LR
Sbjct: 133 QFSLSLFEDPPHCKPEGGLRNHVRKEKGLEVLR 165

The following BLAST results are available for this feature:

BLAST of Carg12782 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022976596.1	3.5e-92	100.00	uncharacterized protein LOC111476944 [Cucurbita maxima]	[more]
XP_022937405.1	7.9e-92	99.42	uncharacterized protein LOC111443705 [Cucurbita moschata]	[more]
XP_023535139.1	1.1e-90	98.83	uncharacterized protein LOC111796654 [Cucurbita pepo subsp. pepo]	[more]
XP_004151974.1	1.8e-67	80.81	PREDICTED: uncharacterized protein LOC101218420 [Cucumis sativus] >KGN57940.1 hy...	[more]
XP_008454610.1	2.3e-67	80.23	PREDICTED: uncharacterized protein LOC103494976 [Cucumis melo]	[more]

BLAST of Carg12782 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54530.1	2.6e-44	62.12	Protein of unknown function, DUF538	[more]
AT1G61667.1	1.3e-40	60.00	Protein of unknown function, DUF538	[more]
AT3G07460.2	8.2e-27	48.31	Protein of unknown function, DUF538	[more]
AT3G07470.1	1.3e-24	39.01	Protein of unknown function, DUF538	[more]
AT5G16380.1	5.5e-23	42.95	Protein of unknown function, DUF538	[more]

BLAST of Carg12782 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg12782 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L7K3\|A0A0A0L7K3_CUCSA	1.2e-67	80.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G399960 PE=4 SV=1	[more]
tr\|A0A1S3BZT2\|A0A1S3BZT2_CUCME	1.5e-67	80.23	uncharacterized protein LOC103494976 OS=Cucumis melo OX=3656 GN=LOC103494976 PE=...	[more]
tr\|A0A1R3IDB2\|A0A1R3IDB2_COCAP	7.3e-54	64.00	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_12931 PE=4 ...	[more]
tr\|A0A061F5S5\|A0A061F5S5_THECC	3.6e-53	64.88	Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_031177 PE=4 ...	[more]
tr\|V7AIF5\|V7AIF5_PHAVU	1.2e-51	67.32	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G146900g PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036758	At5g01610-like
IPR007493	DUF538

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12782-RA	Carg12782-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 40..146 e-value: 3.9E-24 score: 85.1
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 18..171
IPR036758	At5g01610-like superfamily	GENE3D	G3DSA:2.30.240.10		coord: 28..147 e-value: 2.1E-19 score: 71.7
IPR036758	At5g01610-like superfamily	SUPERFAMILY	SSF141562	At5g01610-like	coord: 13..153
None	No IPR available	PANTHER	PTHR31676:SF35	SUBFAMILY NOT NAMED	coord: 18..171

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12782	Cla007387	Watermelon (97103) v1	carwmB0906
Carg12782	Csa3G399960	Cucumber (Chinese Long) v2	carcuB0918
Carg12782	MELO3C018161	Melon (DHL92) v3.5.1	carmeB0891
Carg12782	ClCG10G006100	Watermelon (Charleston Gray)	carwcgB0880
Carg12782	ClCG05G015000	Watermelon (Charleston Gray)	carwcgB0885
Carg12782	CSPI03G22930	Wild cucumber (PI 183967)	carcpiB0939
Carg12782	Cucsa.053370	Cucumber (Gy14) v1	carcgyB1019
Carg12782	CmaCh01G011670	Cucurbita maxima (Rimu)	carcmaB1245
Carg12782	CmaCh09G009120	Cucurbita maxima (Rimu)	carcmaB1240
Carg12782	CmoCh09G009050	Cucurbita moschata (Rifu)	carcmoB1211
Carg12782	CmoCh01G012220	Cucurbita moschata (Rifu)	carcmoB1215
Carg12782	Lsi04G012610	Bottle gourd (USVL1VR-Ls)	carlsiB825
Carg12782	Lsi05G006480	Bottle gourd (USVL1VR-Ls)	carlsiB826
Carg12782	Cp4.1LG02g01360	Cucurbita pepo (Zucchini)	carcpeB1254
Carg12782	Cp4.1LG06g07230	Cucurbita pepo (Zucchini)	carcpeB1255
Carg12782	CsGy3G021920	Cucumber (Gy14) v2	carcgybB0891
Carg12782	MELO3C016608.2	Melon (DHL92) v3.6.1	carmedB0901
Carg12782	MELO3C018161.2	Melon (DHL92) v3.6.1	carmedB0898
Carg12782	CsaV3_3G022640	Cucumber (Chinese Long) v3	carcucB0941
Carg12782	Cla97C10G190180	Watermelon (97103) v2	carwmbB0943
Carg12782	Cla97C05G096200	Watermelon (97103) v2	carwmbB0948
Carg12782	Bhi09G001657	Wax gourd	carwgoB1050

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12782	Carg05665	Silver-seed gourd	carcarB641

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12782	Cucumber (Gy14) v2	carcgybB0889
Carg12782	Cucumber (Gy14) v1	carcgyB1025
Carg12782	Cucurbita maxima (Rimu)	carcmaB1242
Carg12782	Cucurbita maxima (Rimu)	carcmaB1243
Carg12782	Cucurbita maxima (Rimu)	carcmaB1244
Carg12782	Cucurbita moschata (Rifu)	carcmoB1213
Carg12782	Cucurbita moschata (Rifu)	carcmoB1214
Carg12782	Cucurbita pepo (Zucchini)	carcpeB1251
Carg12782	Cucurbita pepo (Zucchini)	carcpeB1253
Carg12782	Wild cucumber (PI 183967)	carcpiB0937
Carg12782	Wild cucumber (PI 183967)	carcpiB0941
Carg12782	Wild cucumber (PI 183967)	carcpiB0942
Carg12782	Cucumber (Chinese Long) v2	carcuB0916
Carg12782	Cucumber (Chinese Long) v2	carcuB0920
Carg12782	Cucumber (Chinese Long) v2	carcuB0921
Carg12782	Cucumber (Chinese Long) v3	carcucB0939
Carg12782	Cucumber (Chinese Long) v3	carcucB0942
Carg12782	Bottle gourd (USVL1VR-Ls)	carlsiB824
Carg12782	Bottle gourd (USVL1VR-Ls)	carlsiB827
Carg12782	Watermelon (Charleston Gray)	carwcgB0884
Carg12782	Watermelon (97103) v1	carwmB0905
Carg12782	Watermelon (97103) v2	carwmbB0944
Carg12782	Watermelon (97103) v2	carwmbB0947