Carg12392 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCTCTTCTTGAATCTGCCTGGCGGGTACTGCTTTTTCTCTTCATAATCTTGTTCTTTCCGCCCTAGATTTGATCTTCATTTTCAAGCACCGATTAGATTCTAAACTTCTGCGAGTAGTTTTTTTTTTTTTTAATTAATTTATTTATTTCTTACGTTCGTTTTCGAGTAGGTTTTGATGTGGGAGTGTTGTCCTTGAATTTCCCTCTCTTATTTGTTAATCGATTGTTGACGTGAGAGTGACATTGCGGTTTTTTATGTAATTTTAGGTTGAATTTCATCTTCTATAGTTGATTTGAAATAGGATCTTGATGTTGAGAGCTAGTGATTTGCACGTTTGATGTAATACGATGAGGTTATGGGTGCCTTGTTTTCTTAAGATTTTTTGTTTGTTTTCCAATTGGAGGATTCAATTTTGGTTTCGTTTGAATGAGTGTTTCCTTTATTTGAAAACATTGACTTGCTTGAGTGTAGAATTACACTATGGTTCTTATTAGTAGAATTAAACTGTGTTTCTTTTTGTATTTGGTGCTTCTTTGATGGGTTCTTTTGCTCTATGGTGCAGTATTTGATTACGAATTTTAGTGATTTTCAACTCGCTTGTGTTGGAAGCTTCATAATCCATGAAAGCGTTTTCTTCTTATCTGGGCTTCCCTTTATTTTTCTCGAAAAAGCAGGATGGCTGAGCAAGTACAAGATCCAGGTTTGCTTTTTCACTTCACCACAAATTTCATAACCAATGAATATTTAGTCAATATTTGATACTTGAATTAGATTTACCTTCGTTAGTGATTCATGTGTGATTATGAACTAAATTAGCAGTTAGCAGCACTTTTTCTGGAAAGATTCGAAGTTATAGGTTTGATATGGAACAACTTAGTATTTCTTTATTCATTCTCATCCAATTAAAAAAGTAGGATGAGTTGATTTCTTGATCTTGATTAATTGTGAGATTAAAAAAAATTATTGGTCTAGGCTTTAATATCAGCCTTACTTTTAAGACGAAAATGCAGCACTTTAACTAGTTCTAATTTTAATTATCCTTATCTTTTGATCTCCAATGGAGAAGATTACAGGAAACAATGATTAATTTTTTTCTTTCCCGCTTTTTGATAATGAACAATTTCATTTATATATGAAATTTACAAAAAGGATAATATCCATGGTTACAAAAGGCTTTCAGAATTGATTTACATGATATTGCCAAGTCAAAAAAAAAATTGAAGGGGGCCTCCTTGTTTGTAAAGACTGTTAGATTCCCCTCCCCCACCCCACAAAAGGAAAAAAAAAAAAAAAAAGATGCCCTAGAAATGTTCTTCTAAGCAGAGCTTTCGTGTTTCGAAAAGGGTAGTTTTGGTCAAACATGTTGGGTAAAAGCAATTTTGTGGAAAGTGAGCCACTCAGATTAGGAAGCCAAATCCATGAATCCTCTGTTGAGCAAGATAGCCACTCGGAAAAAACACGCACAACAATCTTGCACGGGCAGGTGGTGAGACTAGTTGGTTGGTAATCAGCCACTGCTCAGGCTTCAAGCTTCTTTGGGATGAGGCAAATGTAAATTTTATTGAGATTTGTGTTTATGGTTCCATTATGGAAAAAAATATTGGAACACTCTCATAATATCAATTCTTAGAATGTTCCAACATTTTTTTTTAAAGAATTCGGTGGCAGTACCATCTAGGCCAGATGATTTGTCTGTTCCAAGAAGCTGTACTCCCTTGTATACTTCAAGTTCGGTGAAACGAGCTTCTAAATCAGTAGCCAAAATGACATCAATCGGACTCCAATTTATGATAGTGGGAAAAGTCTCCAGTTTACACTTTTTTGTGTGTAAAGCTTTGTAAAAAGCCAAGAATTCCGGAACTATGTCATCCCTGTTAAGCACTCGTCTACCAACAACGGAGAGAATCTCAAGTATGGTGTTCTTCCTTTCCTTTGCAGACATAAACAATGAAAGAATCTGGTGTTAAAGCACCTCTTCTATCTATCTTCTCTTACATTGCTGCTTTCAGCTTTGTTCCTCCTTTGCAGCCAAGGACAATAATTCAGCTTCCATCAATTTCCTATGCGTATGTTGAGCTATGGAAAAAAGAAAAAAGAGATGAAAAGGGAAAGGAACTGTTTCTCATTGATTGCCTTATAGACGATACTGCTGATACTTAAGGATGCAGACAAAGTACCTATCAACTAAGTTTTCCAGCTCAATAATTACACCTCAATTAAGTTAGGGAGACTTTTGAGATGATATCCGTCCGAATGAGATAAGAGAATTCCAATTCTGTAACTATTCTTTTTTCTTCTCAACATTGAAGAAAGAATGAAAAAAGGTAACAACAAGTAAAAAAATCAGAATCCCCAGATTGGTAAAATCATGCCATCCTTCCCTAGGGAACGTTGCCCCTCGCTACTGCGTTCTGTTAGGCCATTGATTATAAGAACAAATGTAGTTTTAACCCACTCTTAATTTTGGATGAATTGTTTTTAGTTGTGATATAAGTCTTTTCTGCTTTTTGCAGGCAAAGACTAATAGTTCTGCTGCACAAGGAAAATGTATTTCACGTCTATTGCTGTATCATTTTGGTGTAAATCTGCCAGTTATGATTGTTTCTTATCCTGTCTTCAAGCTTATGGGAATGAGAAGCACTCTTCCATTGCCATCCTGGTATCTTCTGGTTCTTTATGTCCTAAACCATATATCTTAGGTGTTTAATCCTTCTGGTTTAGTTTACTTTCATTGTTTTCTTATCTTGGATCATAGGATTTAATTTAGTTTGGGTTTCATTTAATGTAGGAAAGTAGTTTTCGGCCAGATAATATTCTACTTTATCGTGGAGGATTTTGTTTTCTACTGGGGGCATAGAATTTTGCACACCAAATGGCTGTACCAGAATGTGCACAGCGTTCATCACGAGTGAGTGAGATTTATAAACGAAAATGAATGATTATTCTGTGTTTTCCCATGATAAAATTGTCCTAGGCTGTTCTAAGTTGCTTATCAAGTGCAGATATGCTACCCCTTTTGGACTAACATCAGAATATGCTCACCCTGCTGAGATCCTGTTCCTTGGATTTGCTACCATTGTCGGTCCGGCTCTTACCGGCCCCCATCTAATGACTCTGTGGCTATGGATGGTTCTTAGAGTGCTCGAGACTGTCGAGGCTCATTGTGGCTATCATTTTCCGTGGAGCCCTTCAAACTTCATACCTTTATATGGGGGGTGAGTCATGTTTTAACAAGAATACGTTGTACTATGTCTGTTGTTCCTGAAATCGGCTTCTTTGCTCGTGCTCTACAGTGCTTACTTCCATGATTATCATCACCGTCTGCTTTTCACAAAATCTGGCAACTACTCGTCGACATTCACTTACATGGACTGGTGAGTTCTGGTCCAAGAAGGGTCGTTTGAACTTCATAGCATTAAAACCAGCTTTGTGGAACACTGATTTACTTCACTTCAATAGATATCGAAAACTATTATTGACAAAGAAAACTATTACTTGCAGGATATTTGGAACGGACAAGGGGTTTAGAAATTTGGAAGCTATAAAAAAGGCAGAAAGTTGATGGGCTGATAGAGAGCTGAGGAAAACGTCGTTGGGTCGAGTCGAGTTGGGTACATTCGAGATAGGTTTCTGATGTATAGGCACATTTGAAAAGGTTTAGTTCATATCACTCTTTCTTGTGTGCCATGATGTGTTTTATGTCTTCTTTTTGTTGTTTAAATTTGAGTATTCTTGAAGTAATGAAGAGCTATGGAACCTTAATCATCCTTCAAATTTTA ATGGCTGCTCTTCTTGAATCTGCCTGGCGGTATTTGATTACGAATTTTAGTGATTTTCAACTCGCTTGTGTTGGAAGCTTCATAATCCATGAAAGCGTTTTCTTCTTATCTGGGCTTCCCTTTATTTTTCTCGAAAAAGCAGGATGGCTGAGCAAGTACAAGATCCAGGCAAAGACTAATAGTTCTGCTGCACAAGGAAAATGTATTTCACGTCTATTGCTGTATCATTTTGGTGTAAATCTGCCAGTTATGATTGTTTCTTATCCTGTCTTCAAGCTTATGGGAATGAGAAGCACTCTTCCATTGCCATCCTGGAAAGTAGTTTTCGGCCAGATAATATTCTACTTTATCGTGGAGGATTTTGTTTTCTACTGGGGGCATAGAATTTTGCACACCAAATGGCTGTACCAGAATGTGCACAGCGTTCATCACGAATATGCTACCCCTTTTGGACTAACATCAGAATATGCTCACCCTGCTGAGATCCTGTTCCTTGGATTTGCTACCATTGTCGGTCCGGCTCTTACCGGCCCCCATCTAATGACTCTGTGGCTATGGATGGTTCTTAGAGTGCTCGAGACTGTCGAGGCTCATTGTGGCTATCATTTTCCGTGGAGCCCTTCAAACTTCATACCTTTATATGGGGGTGCTTACTTCCATGATTATCATCACCGTCTGCTTTTCACAAAATCTGGCAACTACTCGTCGACATTCACTTACATGGACTGGATATTTGGAACGGACAAGGGGTTTAGAAATTTGGAAGCTATAAAAAAGGCAGAAAGTTGATGGGCTGATAGAGAGCTGAGGAAAACGTCGTTGGGTCGAGTCGAGTTGGGTACATTCGAGATAGGTTTCTGATGTATAGGCACATTTGAAAAGGTTTAGTTCATATCACTCTTTCTTGTGTGCCATGATGTGTTTTATGTCTTCTTTTTGTTGTTTAAATTTGAGTATTCTTGAAGTAATGAAGAGCTATGGAACCTTAATCATCCTTCAAATTTTA ATGGCTGCTCTTCTTGAATCTGCCTGGCGGTATTTGATTACGAATTTTAGTGATTTTCAACTCGCTTGTGTTGGAAGCTTCATAATCCATGAAAGCGTTTTCTTCTTATCTGGGCTTCCCTTTATTTTTCTCGAAAAAGCAGGATGGCTGAGCAAGTACAAGATCCAGGCAAAGACTAATAGTTCTGCTGCACAAGGAAAATGTATTTCACGTCTATTGCTGTATCATTTTGGTGTAAATCTGCCAGTTATGATTGTTTCTTATCCTGTCTTCAAGCTTATGGGAATGAGAAGCACTCTTCCATTGCCATCCTGGAAAGTAGTTTTCGGCCAGATAATATTCTACTTTATCGTGGAGGATTTTGTTTTCTACTGGGGGCATAGAATTTTGCACACCAAATGGCTGTACCAGAATGTGCACAGCGTTCATCACGAATATGCTACCCCTTTTGGACTAACATCAGAATATGCTCACCCTGCTGAGATCCTGTTCCTTGGATTTGCTACCATTGTCGGTCCGGCTCTTACCGGCCCCCATCTAATGACTCTGTGGCTATGGATGGTTCTTAGAGTGCTCGAGACTGTCGAGGCTCATTGTGGCTATCATTTTCCGTGGAGCCCTTCAAACTTCATACCTTTATATGGGGGTGCTTACTTCCATGATTATCATCACCGTCTGCTTTTCACAAAATCTGGCAACTACTCGTCGACATTCACTTACATGGACTGGATATTTGGAACGGACAAGGGGTTTAGAAATTTGGAAGCTATAAAAAAGGCAGAAAGTTGA MAALLESAWRYLITNFSDFQLACVGSFIIHESVFFLSGLPFIFLEKAGWLSKYKIQAKTNSSAAQGKCISRLLLYHFGVNLPVMIVSYPVFKLMGMRSTLPLPSWKVVFGQIIFYFIVEDFVFYWGHRILHTKWLYQNVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPALTGPHLMTLWLWMVLRVLETVEAHCGYHFPWSPSNFIPLYGGAYFHDYHHRLLFTKSGNYSSTFTYMDWIFGTDKGFRNLEAIKKAES
BLAST of Carg12392 vs. NCBI nr
Match: XP_022948631.1 (methylsterol monooxygenase 2-2-like [Cucurbita moschata]) HSP 1 Score: 547.7 bits (1410), Expect = 2.1e-152 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0
BLAST of Carg12392 vs. NCBI nr
Match: XP_022998327.1 (methylsterol monooxygenase 2-2-like [Cucurbita maxima]) HSP 1 Score: 545.8 bits (1405), Expect = 7.9e-152 Identity = 261/262 (99.62%), Postives = 261/262 (99.62%), Query Frame = 0
BLAST of Carg12392 vs. NCBI nr
Match: XP_023521502.1 (methylsterol monooxygenase 2-2-like [Cucurbita pepo subsp. pepo] >XP_023523161.1 methylsterol monooxygenase 2-2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 542.3 bits (1396), Expect = 8.8e-151 Identity = 259/261 (99.23%), Postives = 260/261 (99.62%), Query Frame = 0
BLAST of Carg12392 vs. NCBI nr
Match: XP_022964698.1 (methylsterol monooxygenase 2-2 [Cucurbita moschata] >XP_022970560.1 methylsterol monooxygenase 2-2 isoform X2 [Cucurbita maxima] >XP_023521038.1 methylsterol monooxygenase 2-2-like [Cucurbita pepo subsp. pepo] >XP_023519298.1 methylsterol monooxygenase 2-2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 531.6 bits (1368), Expect = 1.5e-147 Identity = 252/262 (96.18%), Postives = 257/262 (98.09%), Query Frame = 0
BLAST of Carg12392 vs. NCBI nr
Match: XP_008457442.1 (PREDICTED: methylsterol monooxygenase 2-2 [Cucumis melo]) HSP 1 Score: 528.1 bits (1359), Expect = 1.7e-146 Identity = 248/262 (94.66%), Postives = 257/262 (98.09%), Query Frame = 0
BLAST of Carg12392 vs. TAIR10
Match: AT1G07420.1 (sterol 4-alpha-methyl-oxidase 2-1) HSP 1 Score: 470.7 bits (1210), Expect = 5.9e-133 Identity = 214/259 (82.63%), Postives = 241/259 (93.05%), Query Frame = 0
BLAST of Carg12392 vs. TAIR10
Match: AT2G29390.1 (sterol 4-alpha-methyl-oxidase 2-2) HSP 1 Score: 459.1 bits (1180), Expect = 1.8e-129 Identity = 212/271 (78.23%), Postives = 241/271 (88.93%), Query Frame = 0
BLAST of Carg12392 vs. TAIR10
Match: AT4G12110.1 (sterol-4alpha-methyl oxidase 1-1) HSP 1 Score: 228.4 bits (581), Expect = 5.1e-60 Identity = 115/265 (43.40%), Postives = 160/265 (60.38%), Query Frame = 0
BLAST of Carg12392 vs. TAIR10
Match: AT4G22753.1 (sterol 4-alpha methyl oxidase 1-3) HSP 1 Score: 223.4 bits (568), Expect = 1.6e-58 Identity = 106/248 (42.74%), Postives = 150/248 (60.48%), Query Frame = 0
BLAST of Carg12392 vs. TAIR10
Match: AT4G22756.1 (sterol C4-methyl oxidase 1-2) HSP 1 Score: 221.5 bits (563), Expect = 6.2e-58 Identity = 108/253 (42.69%), Postives = 152/253 (60.08%), Query Frame = 0
BLAST of Carg12392 vs. Swiss-Prot
Match: sp|Q8VWZ8|SMO22_ARATH (Methylsterol monooxygenase 2-2 OS=Arabidopsis thaliana OX=3702 GN=SMO2-2 PE=2 SV=1) HSP 1 Score: 470.7 bits (1210), Expect = 1.1e-131 Identity = 214/259 (82.63%), Postives = 241/259 (93.05%), Query Frame = 0
BLAST of Carg12392 vs. Swiss-Prot
Match: sp|Q9ZW22|SMO21_ARATH (Methylsterol monooxygenase 2-1 OS=Arabidopsis thaliana OX=3702 GN=SMO2-1 PE=2 SV=2) HSP 1 Score: 459.1 bits (1180), Expect = 3.2e-128 Identity = 212/271 (78.23%), Postives = 241/271 (88.93%), Query Frame = 0
BLAST of Carg12392 vs. Swiss-Prot
Match: sp|Q55D54|MSMOB_DICDI (Putative methylsterol monooxygenase DDB_G0269788 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0269788 PE=3 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 5.4e-59 Identity = 111/258 (43.02%), Postives = 159/258 (61.63%), Query Frame = 0
BLAST of Carg12392 vs. Swiss-Prot
Match: sp|Q8L7W5|SMO11_ARATH (Methylsterol monooxygenase 1-1 OS=Arabidopsis thaliana OX=3702 GN=SMO1-1 PE=1 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 9.2e-59 Identity = 115/265 (43.40%), Postives = 160/265 (60.38%), Query Frame = 0
BLAST of Carg12392 vs. Swiss-Prot
Match: sp|F4JLZ6|SMO13_ARATH (Methylsterol monooxygenase 1-3 OS=Arabidopsis thaliana OX=3702 GN=SMO1-3 PE=2 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 2.9e-57 Identity = 106/248 (42.74%), Postives = 150/248 (60.48%), Query Frame = 0
BLAST of Carg12392 vs. TrEMBL
Match: tr|A0A1S3C6T9|A0A1S3C6T9_CUCME (methylsterol monooxygenase 2-2 OS=Cucumis melo OX=3656 GN=LOC103497129 PE=3 SV=1) HSP 1 Score: 528.1 bits (1359), Expect = 1.1e-146 Identity = 248/262 (94.66%), Postives = 257/262 (98.09%), Query Frame = 0
BLAST of Carg12392 vs. TrEMBL
Match: tr|A0A0A0LVE5|A0A0A0LVE5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G524750 PE=3 SV=1) HSP 1 Score: 524.2 bits (1349), Expect = 1.6e-145 Identity = 246/262 (93.89%), Postives = 256/262 (97.71%), Query Frame = 0
BLAST of Carg12392 vs. TrEMBL
Match: tr|V4UFS8|V4UFS8_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029052mg PE=3 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 2.4e-133 Identity = 223/258 (86.43%), Postives = 244/258 (94.57%), Query Frame = 0
BLAST of Carg12392 vs. TrEMBL
Match: tr|A0A2H5NCU1|A0A2H5NCU1_CITUN (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_033380 PE=3 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 2.4e-133 Identity = 223/258 (86.43%), Postives = 244/258 (94.57%), Query Frame = 0
BLAST of Carg12392 vs. TrEMBL
Match: tr|A0A067FH15|A0A067FH15_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g024309mg PE=3 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 2.4e-133 Identity = 223/258 (86.43%), Postives = 244/258 (94.57%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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