Carg12388 (gene) Silver-seed gourd

NameCarg12388
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionLow-temperature-induced protein
LocationCucurbita_argyrosperma_scaffold_074 : 696459 .. 698381 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAACCCATCCACGGGACAACTTCGAGGTATAGGTAAATTCACGTTTCTTGTTCCTTTGTAATTTGTGTTAAGCAAACCATACAGACAGGCTGAGAAGTGCCTTTCGTTTATTAAACAAATTCATTGAAAACTAACCGAGTTTAGGCATTTCCATACGTAGAGGGGGATTCTTCTTCCAAATGGTCGCCCGCACATTCGCCACCCGTGACAGGAAAGGACCGTGACCCTGAAGAGGATATCGATCACCATCAAAAGAAATCAGTTTTTGCGAAAGTGAAAGAAAAAGCAAAGAAACTCAGATATACTCTAAGCCACAAGAAGAAGCACGGCGAAGACGAGAATGCTACGCCGTCGTGGGGGTATAATTTGGATGAAAATGAAGAGGAAGAGGAGGACCATGTTGATGCTGAATATTTAGGAGCCCCAAGTAAGGTTGTTTGTGCTCATATCTTTCAAATCCTATTCTAAAATATGAACTTGTTTCATTTGCAGTGTATGAATCAGAGCTAGCACCAGAGGGCTGCAAAGAGAATGCCAGGCAGCATCCACGAGCCAATCCTGTGATTGCTGAGAATCATGTGTTAGCAAACAACATAAATCTTGCATCAGGACAAGATGAAAAACCTTTCACCTCGTCGGAAATGTTGTCTGAAATGAACGTCGAGTCGTCTCTTGGGAATATCAAAACAGGAACCGAAACTGCAGCTGCAAATACTACCATTAAGAGAATACAAGAAATGGAGGCTGCTAAACCTTCAAGTCCAAGCAAGACATTGACAGAAGCTGTAACTGAGAAGTTGGCACCTGTTTATTCCACTGTTACTGATGCTACTCATGCTCTTGCCTCAAAGATCCAAAGCCTCACGTTCTCCGCTCCATCGAACCCATCGGCCAATTCTTCACCGGCTACTCCAAAAGACGCTTTTTCCCCAGCAACACAGAAGAGGAGCTCTTCCCCAATGGATCTGCAAGCATCAAGACTTGGTAAAGGAACTGAGCAGATATGGGACAAAGGAGATTCAGTAAAGGAGTACCTGATGCAGAAGTTCGAGCCAGGTGAAGACGAGAGAGCGCTTTCTGAGGTGTTGTTCGATGCGCTGAGTCCAGGGAAACTGCCTGGAGATGTAGGTGTTGTGGAGAAGATGAGGGAGGCAGTAAGTTCCATGTTACAGGCTGATGAGGCACCACAGCCAGTGGCTACACATTTGGCTGCAAAATCTTTGCCACGGATTGAAACGGCACCACAACCAGTGGCTTCACAATTGCCTGCAAAATCTTTACCATTGGCTGAGAACTCACCAAAGCCAGTGGCTGCAACATCTTCATTGCGGGCTGAAACAACACCACAACCAGCAGCTGCAAAACAATCGTTACGAACCAAGAAGACACCAGAGCCCGTGGTTGCACGTTTTGTCACAAAACCTTCATTACCGGCTAAGGAGGCACCTCAAGCAATACTAGCACTACATTTGCCTGCAAAACCTTCATCACAGGCCAAGGAATCACCACAGGCACTCCTGGCTACACGCTTGGCTGCAAAGCCTTCATTACCAGAGGCAACACCACAACCAATAATTACACATTTAGGTTCAAAACATTCATCTAGCGCTCCTATCTTTACCACTACCCACATGGGTGAGTTACTACACCTTCAAATTTATACTTTTACAAATAATGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACACCCTTTATAAGAGTGTGGAAACCTCTCTCTAGCAGACGCGTTCTAAAAACCTTGAGGGGAAGCTCGAAAGGGAAAACCTAAAAAGGACAATATCTGCTAGCGGTGGGCTTAGGTCGTTACAGATAATATAACAGAATAAAACAATATTTCTTTCTGATGCAGTGGCTGAGGAAGAAGACCTAGAAAGAATACTCCAAGCCAATTAA

mRNA sequence

ATGCCAACCCATCCACGGGACAACTTCGAGGCATTTCCATACGTAGAGGGGGATTCTTCTTCCAAATGGTCGCCCGCACATTCGCCACCCGTGACAGGAAAGGACCGTGACCCTGAAGAGGATATCGATCACCATCAAAAGAAATCAGTTTTTGCGAAAGTGAAAGAAAAAGCAAAGAAACTCAGATATACTCTAAGCCACAAGAAGAAGCACGGCGAAGACGAGAATGCTACGCCGTCGTGGGGGTATAATTTGGATGAAAATGAAGAGGAAGAGGAGGACCATGTTGATGCTGAATATTTAGGAGCCCCAATGTATGAATCAGAGCTAGCACCAGAGGGCTGCAAAGAGAATGCCAGGCAGCATCCACGAGCCAATCCTGTGATTGCTGAGAATCATGTGTTAGCAAACAACATAAATCTTGCATCAGGACAAGATGAAAAACCTTTCACCTCGTCGGAAATGTTGTCTGAAATGAACGTCGAGTCGTCTCTTGGGAATATCAAAACAGGAACCGAAACTGCAGCTGCAAATACTACCATTAAGAGAATACAAGAAATGGAGGCTGCTAAACCTTCAAGTCCAAGCAAGACATTGACAGAAGCTGTAACTGAGAAGTTGGCACCTGTTTATTCCACTGTTACTGATGCTACTCATGCTCTTGCCTCAAAGATCCAAAGCCTCACGTTCTCCGCTCCATCGAACCCATCGGCCAATTCTTCACCGGCTACTCCAAAAGACGCTTTTTCCCCAGCAACACAGAAGAGGAGCTCTTCCCCAATGGATCTGCAAGCATCAAGACTTGGTAAAGGAACTGAGCAGATATGGGACAAAGGAGATTCAGTAAAGGAGTACCTGATGCAGAAGTTCGAGCCAGGTGAAGACGAGAGAGCGCTTTCTGAGGTGTTGTTCGATGCGCTGAGTCCAGGGAAACTGCCTGGAGATGTAGGTGTTGTGGAGAAGATGAGGGAGGCAGTAAGTTCCATGTTACAGGCTGATGAGGCACCACAGCCAGTGGCTACACATTTGGCTGCAAAATCTTTGCCACGGATTGAAACGGCACCACAACCAGTGGCTTCACAATTGCCTGCAAAATCTTTACCATTGGCTGAGAACTCACCAAAGCCAGTGGCTGCAACATCTTCATTGCGGGCTGAAACAACACCACAACCAGCAGCTGCAAAACAATCGTTACGAACCAAGAAGACACCAGAGCCCGTGGTTGCACGTTTTGTCACAAAACCTTCATTACCGGCTAAGGAGGCACCTCAAGCAATACTAGCACTACATTTGCCTGCAAAACCTTCATCACAGGCCAAGGAATCACCACAGGCACTCCTGGCTACACGCTTGGCTGCAAAGCCTTCATTACCAGAGGCAACACCACAACCAATAATTACACATTTAGGTTCAAAACATTCATCTAGCGCTCCTATCTTTACCACTACCCACATGGTGGCTGAGGAAGAAGACCTAGAAAGAATACTCCAAGCCAATTAA

Coding sequence (CDS)

ATGCCAACCCATCCACGGGACAACTTCGAGGCATTTCCATACGTAGAGGGGGATTCTTCTTCCAAATGGTCGCCCGCACATTCGCCACCCGTGACAGGAAAGGACCGTGACCCTGAAGAGGATATCGATCACCATCAAAAGAAATCAGTTTTTGCGAAAGTGAAAGAAAAAGCAAAGAAACTCAGATATACTCTAAGCCACAAGAAGAAGCACGGCGAAGACGAGAATGCTACGCCGTCGTGGGGGTATAATTTGGATGAAAATGAAGAGGAAGAGGAGGACCATGTTGATGCTGAATATTTAGGAGCCCCAATGTATGAATCAGAGCTAGCACCAGAGGGCTGCAAAGAGAATGCCAGGCAGCATCCACGAGCCAATCCTGTGATTGCTGAGAATCATGTGTTAGCAAACAACATAAATCTTGCATCAGGACAAGATGAAAAACCTTTCACCTCGTCGGAAATGTTGTCTGAAATGAACGTCGAGTCGTCTCTTGGGAATATCAAAACAGGAACCGAAACTGCAGCTGCAAATACTACCATTAAGAGAATACAAGAAATGGAGGCTGCTAAACCTTCAAGTCCAAGCAAGACATTGACAGAAGCTGTAACTGAGAAGTTGGCACCTGTTTATTCCACTGTTACTGATGCTACTCATGCTCTTGCCTCAAAGATCCAAAGCCTCACGTTCTCCGCTCCATCGAACCCATCGGCCAATTCTTCACCGGCTACTCCAAAAGACGCTTTTTCCCCAGCAACACAGAAGAGGAGCTCTTCCCCAATGGATCTGCAAGCATCAAGACTTGGTAAAGGAACTGAGCAGATATGGGACAAAGGAGATTCAGTAAAGGAGTACCTGATGCAGAAGTTCGAGCCAGGTGAAGACGAGAGAGCGCTTTCTGAGGTGTTGTTCGATGCGCTGAGTCCAGGGAAACTGCCTGGAGATGTAGGTGTTGTGGAGAAGATGAGGGAGGCAGTAAGTTCCATGTTACAGGCTGATGAGGCACCACAGCCAGTGGCTACACATTTGGCTGCAAAATCTTTGCCACGGATTGAAACGGCACCACAACCAGTGGCTTCACAATTGCCTGCAAAATCTTTACCATTGGCTGAGAACTCACCAAAGCCAGTGGCTGCAACATCTTCATTGCGGGCTGAAACAACACCACAACCAGCAGCTGCAAAACAATCGTTACGAACCAAGAAGACACCAGAGCCCGTGGTTGCACGTTTTGTCACAAAACCTTCATTACCGGCTAAGGAGGCACCTCAAGCAATACTAGCACTACATTTGCCTGCAAAACCTTCATCACAGGCCAAGGAATCACCACAGGCACTCCTGGCTACACGCTTGGCTGCAAAGCCTTCATTACCAGAGGCAACACCACAACCAATAATTACACATTTAGGTTCAAAACATTCATCTAGCGCTCCTATCTTTACCACTACCCACATGGTGGCTGAGGAAGAAGACCTAGAAAGAATACTCCAAGCCAATTAA

Protein sequence

MPTHPRDNFEAFPYVEGDSSSKWSPAHSPPVTGKDRDPEEDIDHHQKKSVFAKVKEKAKKLRYTLSHKKKHGEDENATPSWGYNLDENEEEEEDHVDAEYLGAPMYESELAPEGCKENARQHPRANPVIAENHVLANNINLASGQDEKPFTSSEMLSEMNVESSLGNIKTGTETAAANTTIKRIQEMEAAKPSSPSKTLTEAVTEKLAPVYSTVTDATHALASKIQSLTFSAPSNPSANSSPATPKDAFSPATQKRSSSPMDLQASRLGKGTEQIWDKGDSVKEYLMQKFEPGEDERALSEVLFDALSPGKLPGDVGVVEKMREAVSSMLQADEAPQPVATHLAAKSLPRIETAPQPVASQLPAKSLPLAENSPKPVAATSSLRAETTPQPAAAKQSLRTKKTPEPVVARFVTKPSLPAKEAPQAILALHLPAKPSSQAKESPQALLATRLAAKPSLPEATPQPIITHLGSKHSSSAPIFTTTHMVAEEEDLERILQAN
BLAST of Carg12388 vs. NCBI nr
Match: XP_023524565.1 (nucleolar and coiled-body phosphoprotein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 679.1 bits (1751), Expect = 1.1e-191
Identity = 483/499 (96.79%), Postives = 484/499 (96.99%), Query Frame = 0

Query: 1   MPTHPRDNFEAFPYVEGDSSSKWSPAHSPPVTGKDRDPEEDIDHHQKKSVFAKVKEKAKK 60
           MPTHPRDNFEAFPYVEGDSSSKWSPAHSPPVTGKDRDPEEDIDHHQKKSVFAKVKEKAKK
Sbjct: 1   MPTHPRDNFEAFPYVEGDSSSKWSPAHSPPVTGKDRDPEEDIDHHQKKSVFAKVKEKAKK 60

Query: 61  LRYTLSHKKKHGEDENATPSWGYNLDENEEEEEDHVDAEYLGAPMYESELAPEGCKENAR 120
           LRYTLSHKKKHGEDENATPSWGYNLDENEEEEEDHVDAEYLGAPMYESELAPEGCKENAR
Sbjct: 61  LRYTLSHKKKHGEDENATPSWGYNLDENEEEEEDHVDAEYLGAPMYESELAPEGCKENAR 120

Query: 121 QHPRANPVIAENHVLANNINLASGQDEKPFTSSEMLSEMNVESSLGNIKTGTETAAANTT 180
           QHPRANPVIAENHVLANNINLASGQDEKPFTSSEM SEM VESSLGNIKTGTETAAANTT
Sbjct: 121 QHPRANPVIAENHVLANNINLASGQDEKPFTSSEMSSEMIVESSLGNIKTGTETAAANTT 180

Query: 181 IKRIQEMEAAKPSSPSKTLTEAVTEKLAPVYSTVTDATHALASKIQSLTFSAPSNPSANX 240
           IKRIQEMEAAKPSSPSKTLTEAVTEKLAPVYSTVTDATHALASKIQSLTFSA       X
Sbjct: 181 IKRIQEMEAAKPSSPSKTLTEAVTEKLAPVYSTVTDATHALASKIQSLTFSAXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXLQASRLGKGTEQIWDKGDSVKEYLMQKFEPGEDERALS 300
           XXXXXXXXXXXXXXXXXXXXXX    RLGKGTEQIWDKGDSVKEYLMQKFEPGEDERALS
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXRLGKGTEQIWDKGDSVKEYLMQKFEPGEDERALS 300

Query: 301 EVLFDALSPGKLPGDVGVVEKMREAVSSMLQADEAPQPVATHLXXXXXXXXXXXXXXXXX 360
           EVLFDALSPGKLPGDVGVVEKMREAVSSMLQADEAPQPVATHL  XXXXXXXXXXXXXXX
Sbjct: 301 EVLFDALSPGKLPGDVGVVEKMREAVSSMLQADEAPQPVATHLAEXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXTSSLRXXXXXXXXXXXXXXXXXXXXXXXXXXFVTKPSLPAK 420
           XXXXXXXXXXXXXXXXXXXTSSLRXXXXXXXXXXXXXXXXXXXXXXXXXXFVTKPSLPAK
Sbjct: 361 XXXXXXXXXXXXXXXXXXXTSSLRXXXXXXXXXXXXXXXXXXXXXXXXXXFVTKPSLPAK 420

Query: 421 EAPQAILALHLXXXXXXXXXXXXXXXXXXXXXXXXXXPEATPQPIITHLGSKHSSSAPIF 480
           EAPQAILALHLXXXXXXXXXXXXXXXXXXXXXXXXXXPEATPQP+ITHLGSKHSSSAPIF
Sbjct: 421 EAPQAILALHLXXXXXXXXXXXXXXXXXXXXXXXXXXPEATPQPMITHLGSKHSSSAPIF 480

Query: 481 TTTHMVAEEEDLERILQAN 500
           TTTHMVAEEEDLERILQAN
Sbjct: 481 TTTHMVAEEEDLERILQAN 499

BLAST of Carg12388 vs. NCBI nr
Match: XP_022949059.1 (uncharacterized protein LOC111452523 [Cucurbita moschata])

HSP 1 Score: 605.9 bits (1561), Expect = 1.2e-169
Identity = 340/343 (99.13%), Postives = 341/343 (99.42%), Query Frame = 0

Query: 1   MPTHPRDNFEAFPYVEGDSSSKWSPAHSPPVTGKDRDPEEDIDHHQKKSVFAKVKEKAKK 60
           MPTHPRDNFEAF YVEGDSSSKWSPAHSPPVTGKDRDPEEDIDHHQKKSVFAKVKEKAKK
Sbjct: 1   MPTHPRDNFEAFLYVEGDSSSKWSPAHSPPVTGKDRDPEEDIDHHQKKSVFAKVKEKAKK 60

Query: 61  LRYTLSHKKKHGEDENATPSWGYNLDENEEEEEDHVDAEYLGAPMYESELAPEGCKENAR 120
           LRYTLSHKKKHGEDENATPSWGYNLDENEEEEEDHVDAEYLGAPMYESELAPEGCKENAR
Sbjct: 61  LRYTLSHKKKHGEDENATPSWGYNLDENEEEEEDHVDAEYLGAPMYESELAPEGCKENAR 120

Query: 121 QHPRANPVIAENHVLANNINLASGQDEKPFTSSEMLSEMNVESSLGNIKTGTETAAANTT 180
           QHPRANPVIAENHVLANNINLASGQDEKPFTSSEM SEM+VESSLGNIKTGTETAAANTT
Sbjct: 121 QHPRANPVIAENHVLANNINLASGQDEKPFTSSEMSSEMSVESSLGNIKTGTETAAANTT 180

Query: 181 IKRIQEMEAAKPSSPSKTLTEAVTEKLAPVYSTVTDATHALASKIQSLTFSAPSNPSANX 240
           IKRIQEMEAAKPSSPSKTLTEAVTEKLAPVYSTVTDATHALASKIQSLTFSAPSNPSANX
Sbjct: 181 IKRIQEMEAAKPSSPSKTLTEAVTEKLAPVYSTVTDATHALASKIQSLTFSAPSNPSANX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXLQASRLGKGTEQIWDKGDSVKEYLMQKFEPGEDERALS 300
           XXXXXXXXXXXXXXXXXXXXXXLQASRLGKGTEQIWDKGDSVKEYLMQKFEPGEDERALS
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXLQASRLGKGTEQIWDKGDSVKEYLMQKFEPGEDERALS 300

Query: 301 EVLFDALSPGKLPGDVGVVEKMREAVSSMLQADEAPQPVATHL 344
           EVLFDALSPGKLPGDVGVVEKMREAVSSMLQADEAPQPVATHL
Sbjct: 301 EVLFDALSPGKLPGDVGVVEKMREAVSSMLQADEAPQPVATHL 343

BLAST of Carg12388 vs. NCBI nr
Match: XP_022998667.1 (uncharacterized protein LOC111493251 [Cucurbita maxima])

HSP 1 Score: 458.0 bits (1177), Expect = 4.1e-125
Identity = 266/275 (96.73%), Postives = 269/275 (97.82%), Query Frame = 0

Query: 42  IDHHQKKSVFAKVKEKAKKLRYTLSHKKKHGEDENATPSWGYNLDENEEEEEDHVDAEYL 101
           +DHHQKKSVFAKVKEKAKKLRYTLSHKKKHGEDENATPSWGYNLDENEEEEEDHVDAEYL
Sbjct: 1   MDHHQKKSVFAKVKEKAKKLRYTLSHKKKHGEDENATPSWGYNLDENEEEEEDHVDAEYL 60

Query: 102 GAPMYESELAPEGCKENARQHPRANPVIAENHVLANNINLASGQDEKPFTSSEMLSEMNV 161
           GAPMYESELAPEGCKENARQHPRANPVIAENHVLANNINLASGQDEKPF+SSEM SEM V
Sbjct: 61  GAPMYESELAPEGCKENARQHPRANPVIAENHVLANNINLASGQDEKPFSSSEMSSEMIV 120

Query: 162 ESSLGNIKTGTETAAANTTIKRIQEMEAAKPSSPSKTLTEAVTEKLAPVYSTVTDATHAL 221
           ESSLGNIKTGTETAAANTTIKRIQEMEAAKPSSPSKTLTEAVTEKLAPVYSTVTDATHAL
Sbjct: 121 ESSLGNIKTGTETAAANTTIKRIQEMEAAKPSSPSKTLTEAVTEKLAPVYSTVTDATHAL 180

Query: 222 ASKIQSLTFSAPSNPSANXXXXXXXXXXXXXXXXXXXXXXXLQASRLGKGTEQIWDKGDS 281
           ASKIQSLTFSAPSNP   XXXXXXXXXXXXXXXXXXXXXXX QASRLGKGTEQIWDKGDS
Sbjct: 181 ASKIQSLTFSAPSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXQASRLGKGTEQIWDKGDS 240

Query: 282 VKEYLMQKFEPGEDERALSEVLFDALSPGKLPGDV 317
           VKEYLMQKFEPGEDERALSEVLFDALSPGK+PGDV
Sbjct: 241 VKEYLMQKFEPGEDERALSEVLFDALSPGKMPGDV 275

BLAST of Carg12388 vs. NCBI nr
Match: XP_016902102.1 (PREDICTED: proline-rich protein 36 [Cucumis melo])

HSP 1 Score: 396.4 bits (1017), Expect = 1.5e-106
Identity = 233/349 (66.76%), Postives = 262/349 (75.07%), Query Frame = 0

Query: 9   FEAFPYVEGDSSSKWSPAHSPPVTGKDRDPEEDIDHHQKKSVFAKVKEKAKKLRYTLSHK 68
           FE FP  +G+ +S+W P ++ PV  KD D E+DIDHHQKKSVF KVKEKAKKLR +LS+K
Sbjct: 13  FEPFPCADGE-ASRWPPTNASPVLVKDHDLEDDIDHHQKKSVFTKVKEKAKKLRNSLSNK 72

Query: 69  KKHGEDENATPSWGYNLDENEEEEEDHVDAEYLGAP--------------MYESELAPEG 128
           K+HGEDEN TPSWGYNLDE+EEEEE  VDAEYLGAP              +YESELAPE 
Sbjct: 73  KRHGEDENITPSWGYNLDEDEEEEEG-VDAEYLGAPSKTSFHYIILLSFVVYESELAPED 132

Query: 129 CKENARQHPRANPVIAENHVLANNINLASGQDEKPFTSSEMLSEMNVESSLGNIKTGTET 188
           CKENARQHPRA+PVIAENH LAN I LA G DEKP  S E LS+M VESS+GN  T  ET
Sbjct: 133 CKENARQHPRADPVIAENHTLANTIKLAFGHDEKPSNSPETLSQMAVESSIGNSNTSNET 192

Query: 189 AAANTTIKRIQEMEAAKPSSPSKTLTEAVTEKLAPVYSTVTDATHALASKIQSLTFSAPS 248
             AN+T+K IQE E AKPSSP+KTLTE +TEKLAPVYSTVTDATHA+ASKIQSLT S+P 
Sbjct: 193 TIANSTMKIIQEKEVAKPSSPNKTLTETMTEKLAPVYSTVTDATHAIASKIQSLTISSPX 252

Query: 249 NPSANXXXXXXXXXXXXXXXXXXXXXXXLQASRLGKGTEQIWDKGDSVKEYLMQKFEPGE 308
                XXXXXXXX                Q+  L KGTEQIWDKG SVKEYLM KFEPGE
Sbjct: 253 XXXXXXXXXXXXXASSLTIKTTCSDPIATQSPSLSKGTEQIWDKGVSVKEYLMHKFEPGE 312

Query: 309 DERALSEVLFDALSPGKLPGDVGVVEKMREAVSSMLQADEAPQPVATHL 344
           DERALS+VL DALSP   PG +GVVEK+REAV+SML+A +APQ  +THL
Sbjct: 313 DERALSQVLSDALSPRAKPG-IGVVEKVREAVNSMLRAGDAPQQKSTHL 358

BLAST of Carg12388 vs. NCBI nr
Match: KGN65746.1 (hypothetical protein Csa_1G524680 [Cucumis sativus])

HSP 1 Score: 385.2 bits (988), Expect = 3.4e-103
Identity = 218/328 (66.46%), Postives = 245/328 (74.70%), Query Frame = 0

Query: 16  EGDSSSKWSPAHSPPVTGKDRDPEEDIDHHQKKSVFAKVKEKAKKLRYTLSHKKKHGEDE 75
           +GD +S+W P  + PV GKD D E+DIDHHQKKSVF KVKEKAKKLR +LS+KK+HGEDE
Sbjct: 24  DGD-ASRWPPTQASPVLGKDHDLEDDIDHHQKKSVFTKVKEKAKKLRNSLSNKKRHGEDE 83

Query: 76  NATPSWGYNLDENEEEEEDHVDAEYLGAPMYESELAPEGCKENARQHPRANPVIAENHVL 135
           N TPSWGYNLDE E    + VDAEYLGAPMYESELAPE CKENARQHPRA+PVIAE+H L
Sbjct: 84  NITPSWGYNLDE-EXXXXEGVDAEYLGAPMYESELAPEDCKENARQHPRADPVIAESHTL 143

Query: 136 ANNINLASGQDEKPFTSSEMLSEMNVESSLGNIKTGTETAAANTTIKRIQEMEAAKPSSP 195
           AN I LA G +EKP  S E LS+M+VESS+GN KT  ET  AN+ +K IQE E AK SSP
Sbjct: 144 ANTIKLAFGHNEKPSNSPETLSQMDVESSIGNSKTSDETTTANSAMKNIQEKEVAKLSSP 203

Query: 196 SKTLTEAVTEKLAPVYSTVTDATHALASKIQSLTFSAPSNPSANXXXXXXXXXXXXXXXX 255
           +KTLT     KLAPVYSTVTDATHA+ASKIQSLT SAPS+ S                  
Sbjct: 204 TKTLTXXXXXKLAPVYSTVTDATHAIASKIQSLTISAPSDSST--------PKKASSPTI 263

Query: 256 XXXXXXXLQASRLGKGTEQIWDKGDSVKEYLMQKFEPGEDERALSEVLFDALSPGKLPGD 315
                   QA  L KGTEQ+WDKG SVKEYLM KFEPGEDERALS+VL DALSP   PG 
Sbjct: 264 QSSDPIATQAPSLNKGTEQVWDKGVSVKEYLMHKFEPGEDERALSQVLSDALSPRAKPG- 323

Query: 316 VGVVEKMREAVSSMLQADEAPQPVATHL 344
           VGVVEK+REAV+SML+A + PQP +THL
Sbjct: 324 VGVVEKVREAVNSMLRAGDEPQPKSTHL 340

BLAST of Carg12388 vs. TAIR10
Match: AT3G46750.1 (unknown protein)

HSP 1 Score: 140.6 bits (353), Expect = 2.7e-33
Identity = 115/328 (35.06%), Postives = 154/328 (46.95%), Query Frame = 0

Query: 16  EGDSSSKWSPAHSPPVTGKDRDPEEDIDHHQKKSVFAKVKEKAKKLRYTLSHKKKHGEDE 75
           +   +SK SP+ SP    K+ D E     H KKS+F+K+K+KAKKL+++LS KK+H E+ 
Sbjct: 34  QSGEASKRSPSGSP---RKENDGEHS---HHKKSLFSKMKDKAKKLQHSLSTKKRHDEEG 93

Query: 76  NATPSWGYNLDENEEE-----------------------EEDHVDAEYLGAPMYESELAP 135
           +AT S     +++E                         EE+  D EYLGAPMYES+ AP
Sbjct: 94  DATMSPFCRSEDHEVRXXXXXXXXXXXXXXXXXXXXXXGEEEEEDPEYLGAPMYESKKAP 153

Query: 136 EGCKENARQHPRANPVIAENHVLA--------NNINLASGQDEKPFTSSEMLSEMNVESS 195
           E  KE ARQHPR NPVI E +VL+                                    
Sbjct: 154 EELKETARQHPRENPVITETNVLSVLPAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 213

Query: 196 LGNIKTGTETAAANTTIKRIQEMEA-AKPSSPSKTLTEAVTEKLAPVYSTVTDATHALAS 255
                  T T    ++ K  +E  +  +P SPSKT+TE VTEKLAP Y+ V+DAT A+  
Sbjct: 214 XXXXXXXTTTIVTESSEKTRKECTSQQEPISPSKTVTETVTEKLAPGYAKVSDATQAITK 273

Query: 256 KIQSLTFSAPSNPSANXXXXXXXXXXXXXXXXXXXXXXXLQASRLGKGTEQIWDKGDSVK 312
           KIQ + F  P+                                       ++WDKG S+K
Sbjct: 274 KIQDMAFPEPTEREEEVNDVAEINTAGTNQPTGF--------------NTKVWDKGVSMK 333

BLAST of Carg12388 vs. TAIR10
Match: AT4G25580.1 (CAP160 protein)

HSP 1 Score: 47.0 bits (110), Expect = 4.0e-05
Identity = 26/61 (42.62%), Postives = 37/61 (60.66%), Query Frame = 0

Query: 269 GKGTEQIWDKGDSVKEYLMQKFEPGEDERALSEVLFDALSPGKLPGDV-----GVVEKMR 325
           G GTEQ  D+G S KE+L +K  PGE+++ALSEV+ + L  G   G+      G+V +  
Sbjct: 466 GTGTEQGQDRGVSAKEFLTEKLSPGEEDKALSEVVTEKLHLGGGGGETAPPKRGIVTQSE 525

BLAST of Carg12388 vs. TrEMBL
Match: tr|A0A1S4E1K0|A0A1S4E1K0_CUCME (proline-rich protein 36 OS=Cucumis melo OX=3656 GN=LOC103497136 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 9.8e-107
Identity = 233/349 (66.76%), Postives = 262/349 (75.07%), Query Frame = 0

Query: 9   FEAFPYVEGDSSSKWSPAHSPPVTGKDRDPEEDIDHHQKKSVFAKVKEKAKKLRYTLSHK 68
           FE FP  +G+ +S+W P ++ PV  KD D E+DIDHHQKKSVF KVKEKAKKLR +LS+K
Sbjct: 13  FEPFPCADGE-ASRWPPTNASPVLVKDHDLEDDIDHHQKKSVFTKVKEKAKKLRNSLSNK 72

Query: 69  KKHGEDENATPSWGYNLDENEEEEEDHVDAEYLGAP--------------MYESELAPEG 128
           K+HGEDEN TPSWGYNLDE+EEEEE  VDAEYLGAP              +YESELAPE 
Sbjct: 73  KRHGEDENITPSWGYNLDEDEEEEEG-VDAEYLGAPSKTSFHYIILLSFVVYESELAPED 132

Query: 129 CKENARQHPRANPVIAENHVLANNINLASGQDEKPFTSSEMLSEMNVESSLGNIKTGTET 188
           CKENARQHPRA+PVIAENH LAN I LA G DEKP  S E LS+M VESS+GN  T  ET
Sbjct: 133 CKENARQHPRADPVIAENHTLANTIKLAFGHDEKPSNSPETLSQMAVESSIGNSNTSNET 192

Query: 189 AAANTTIKRIQEMEAAKPSSPSKTLTEAVTEKLAPVYSTVTDATHALASKIQSLTFSAPS 248
             AN+T+K IQE E AKPSSP+KTLTE +TEKLAPVYSTVTDATHA+ASKIQSLT S+P 
Sbjct: 193 TIANSTMKIIQEKEVAKPSSPNKTLTETMTEKLAPVYSTVTDATHAIASKIQSLTISSPX 252

Query: 249 NPSANXXXXXXXXXXXXXXXXXXXXXXXLQASRLGKGTEQIWDKGDSVKEYLMQKFEPGE 308
                XXXXXXXX                Q+  L KGTEQIWDKG SVKEYLM KFEPGE
Sbjct: 253 XXXXXXXXXXXXXASSLTIKTTCSDPIATQSPSLSKGTEQIWDKGVSVKEYLMHKFEPGE 312

Query: 309 DERALSEVLFDALSPGKLPGDVGVVEKMREAVSSMLQADEAPQPVATHL 344
           DERALS+VL DALSP   PG +GVVEK+REAV+SML+A +APQ  +THL
Sbjct: 313 DERALSQVLSDALSPRAKPG-IGVVEKVREAVNSMLRAGDAPQQKSTHL 358

BLAST of Carg12388 vs. TrEMBL
Match: tr|A0A0A0M0K1|A0A0A0M0K1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G524680 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 2.3e-103
Identity = 218/328 (66.46%), Postives = 245/328 (74.70%), Query Frame = 0

Query: 16  EGDSSSKWSPAHSPPVTGKDRDPEEDIDHHQKKSVFAKVKEKAKKLRYTLSHKKKHGEDE 75
           +GD +S+W P  + PV GKD D E+DIDHHQKKSVF KVKEKAKKLR +LS+KK+HGEDE
Sbjct: 24  DGD-ASRWPPTQASPVLGKDHDLEDDIDHHQKKSVFTKVKEKAKKLRNSLSNKKRHGEDE 83

Query: 76  NATPSWGYNLDENEEEEEDHVDAEYLGAPMYESELAPEGCKENARQHPRANPVIAENHVL 135
           N TPSWGYNLDE E    + VDAEYLGAPMYESELAPE CKENARQHPRA+PVIAE+H L
Sbjct: 84  NITPSWGYNLDE-EXXXXEGVDAEYLGAPMYESELAPEDCKENARQHPRADPVIAESHTL 143

Query: 136 ANNINLASGQDEKPFTSSEMLSEMNVESSLGNIKTGTETAAANTTIKRIQEMEAAKPSSP 195
           AN I LA G +EKP  S E LS+M+VESS+GN KT  ET  AN+ +K IQE E AK SSP
Sbjct: 144 ANTIKLAFGHNEKPSNSPETLSQMDVESSIGNSKTSDETTTANSAMKNIQEKEVAKLSSP 203

Query: 196 SKTLTEAVTEKLAPVYSTVTDATHALASKIQSLTFSAPSNPSANXXXXXXXXXXXXXXXX 255
           +KTLT     KLAPVYSTVTDATHA+ASKIQSLT SAPS+ S                  
Sbjct: 204 TKTLTXXXXXKLAPVYSTVTDATHAIASKIQSLTISAPSDSST--------PKKASSPTI 263

Query: 256 XXXXXXXLQASRLGKGTEQIWDKGDSVKEYLMQKFEPGEDERALSEVLFDALSPGKLPGD 315
                   QA  L KGTEQ+WDKG SVKEYLM KFEPGEDERALS+VL DALSP   PG 
Sbjct: 264 QSSDPIATQAPSLNKGTEQVWDKGVSVKEYLMHKFEPGEDERALSQVLSDALSPRAKPG- 323

Query: 316 VGVVEKMREAVSSMLQADEAPQPVATHL 344
           VGVVEK+REAV+SML+A + PQP +THL
Sbjct: 324 VGVVEKVREAVNSMLRAGDEPQPKSTHL 340

BLAST of Carg12388 vs. TrEMBL
Match: tr|A0A2N9HV50|A0A2N9HV50_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43441 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.0e-63
Identity = 186/341 (54.55%), Postives = 222/341 (65.10%), Query Frame = 0

Query: 15  VEGDSSSKWSPAHSPPVTGKDRDPEEDIDHHQKKSVFAKVKEKAKKLRYTLSHKKKHGED 74
           + GD  SKWSP  S P  GKD D EED  HH KKSV  KVKEKAK+LRYTLS KKK+ ED
Sbjct: 25  LRGD-GSKWSPNSSSPTLGKDHDLEEDPAHHHKKSVLTKVKEKAKRLRYTLS-KKKYSED 84

Query: 75  ENATPSWGYNLDENEEEEEDHVDAEYLGAPMYESELAPEGCKENARQHPRANPVIAENHV 134
            N TPSWG +LD++EE EE+  DAEYLGAPMYESELAPEG +E+ARQHPR  PVI+E HV
Sbjct: 85  GNTTPSWGVSLDDDEEGEEE--DAEYLGAPMYESELAPEGYREHARQHPREIPVISEKHV 144

Query: 135 LANNINLASGQDEKPFTSSEMLSEMNVESSLGNIKTGTETAAANTTIKRIQEMEAAKPSS 194
           LA+++N  + Q+                                      QEM+A    S
Sbjct: 145 LASSVNCNAEQE--------------------------------------QEMDA----S 204

Query: 195 PSKTLTEAVTEKLAPVYSTVTDATHALASKIQSLTFSAPS---------------NPSAN 254
           P+KT+TE V EKLAP Y  V+DAT+A+ASK+Q LT S PS                    
Sbjct: 205 PNKTITETVAEKLAPAYFAVSDATYAIASKVQCLTVSTPSAXXXXXXXXXXXXXXXXXXX 264

Query: 255 XXXXXXXXXXXXXXXXXXXXXXXLQASRLGK---GTEQIWDKGDSVKEYLMQKFEPGEDE 314
           XXXXXXXXXXXXXXXXXXXXXXX   + +GK     E  WDKG SVKEYLM K EPGEDE
Sbjct: 265 XXXXXXXXXXXXXXXXXXXXXXXXXXTEIGKHANAGEHKWDKGVSVKEYLMNKLEPGEDE 319

Query: 315 RALSEVLFDALSPGKLPGDVGVVEKMREAVSSMLQADEAPQ 338
           RALS+V+ +A+SP + PGD+GVVEK+REAV+S+L  +E+P+
Sbjct: 325 RALSQVISEAISPRRTPGDIGVVEKVREAVTSLLWHEESPK 319

BLAST of Carg12388 vs. TrEMBL
Match: tr|A0A2R6QJ34|A0A2R6QJ34_ACTCH (Low-temperature-induced protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc16438 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 2.6e-59
Identity = 157/349 (44.99%), Postives = 197/349 (56.45%), Query Frame = 0

Query: 2   PTHPR----DNFEAFPYVEGDSSSKWSPAHSPPVTGKDRDPEEDIDHHQKKSVFAKVKEK 61
           PT PR      FE    ++GD+ + W  + S PV G+D D  E+  H+ KKSV  KVKEK
Sbjct: 16  PTTPRARTSPTFEQL--LQGDAPN-W-VSSSSPVLGRDHDHGENYGHNNKKSVLTKVKEK 75

Query: 62  AKKLRYTLSHKKKHGEDENATPSWGYNLDENEEEEEDHVDAEYLGAPMYESELAPEGCKE 121
           AKK+R +LS KKKHG ++  +P WG  LD++EE+E    D EYLGAPMYESE APE CKE
Sbjct: 76  AKKMRQSLS-KKKHGHEDTESPPWGVTLDDDEEDE----DPEYLGAPMYESEKAPEACKE 135

Query: 122 NARQHPRANPVIAENHVLANNINLASGQDEKPFTSSEMLSEMNVESSLGNIKTGTETAAA 181
            ARQHPRA PV++E HVL N                                        
Sbjct: 136 TARQHPRAIPVVSEKHVLPN---------------------------------------- 195

Query: 182 NTTIKRIQEMEAAKPSSPSKTLTEAVTEKLAPVYSTVTDATHALASKIQSLTFSA--PSN 241
             +IK   E E  KP SPSKT+TE VTEKL P Y+ V+DATHA+ASKI  LT +     N
Sbjct: 196 --SIKHDVEQEKQKPLSPSKTITETVTEKLGPAYAAVSDATHAIASKIAGLTIAGGDSGN 255

Query: 242 PSANXXXXXXXXXXXXXXXXXXXXXXXLQASRLGKGTE---QIWDKGDSVKEYLMQKFEP 301
            + +                           +LG+G+E   Q WDKG SVKEYLM K EP
Sbjct: 256 FAGSTDTAGVHSASPLTVVTDTADCAVSGMQKLGRGSEPRGQTWDKGVSVKEYLMTKLEP 313

Query: 302 GEDERALSEVLFDALSPGKLPGDVGVVEKMREAVSSMLQADEAPQPVAT 342
           GEDER LS+V+ +A+SP + PGDVGVVEK++EAV+S L+++E  Q   T
Sbjct: 316 GEDERVLSQVITEAISPKRTPGDVGVVEKVKEAVTSFLRSEEPSQSTTT 313

BLAST of Carg12388 vs. TrEMBL
Match: tr|V4SCB2|V4SCB2_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10029821mg PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 4.6e-56
Identity = 163/338 (48.22%), Postives = 205/338 (60.65%), Query Frame = 0

Query: 4   HPRDNFEAFPYVEGDSSSKWSPAHSPPVTGKDRDPEEDIDHHQKKSVFAKVKEKAKKLRY 63
           HPR    A   V    +SKWSP H+ P + +  +PEED   H +KSV +KVKEKA+KLR+
Sbjct: 24  HPRSPTTAEHLV--GEASKWSP-HNSPTSRRGHEPEEDHTPH-RKSVLSKVKEKARKLRH 83

Query: 64  TLSHKKKHGEDENATPSWGYNLDENEEEEEDHVDAEYLGAPMYESELAPEGCKENARQHP 123
           +LS KKKH E+EN TPS+G  +++ E+EEE   DAEYLGAPMYESELAPEG KE AR HP
Sbjct: 84  SLSGKKKHPEEENMTPSFGVTMEDEEDEEE---DAEYLGAPMYESELAPEGYKEKARLHP 143

Query: 124 RANPVIAENHVLANNINLASGQDEKPFTSSEMLSEMNVESSLGNIKTGTETAAANTTIKR 183
           R  PVI+E HVL+++I     ++EKP                          + N T+  
Sbjct: 144 RLIPVISEKHVLSSSIK----ENEKP-------------------------PSPNKTVNG 203

Query: 184 IQEMEAAKPSSPSKTLTEAVTEKLAPVYSTVTDATHALASKIQSLTFSAPSNPSANXXXX 243
            Q            TLTE VTEKLAP Y+T++DATHA+ASKIQ LT S P+   +N    
Sbjct: 204 HQ--NXXXXXXXXTTLTETVTEKLAPAYATLSDATHAIASKIQGLTVSTPTASESNEQDN 263

Query: 244 XXXXXXXXXXXXXXXXXXXLQASRLGKGTEQIWDKGDSVKEYLMQKFEPGEDERALSEVL 303
                    XXXXXXXXXX             WDKG SVKEY+  KFEPGE+ERALS+V+
Sbjct: 264 LATLKQATSXXXXXXXXXXXXXXXXXXXK---WDKGVSVKEYIKHKFEPGEEERALSKVI 320

Query: 304 FDALSPGKLPGDVGVVEKMREAVSSMLQADEAPQPVAT 342
            D +SP + P +VGVV KM+EAV+S L  +E+PQ + T
Sbjct: 324 TDVMSPKRSPREVGVVGKMKEAVTSFLWQEESPQSLVT 320

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023524565.11.1e-19196.79nucleolar and coiled-body phosphoprotein 1 [Cucurbita pepo subsp. pepo][more]
XP_022949059.11.2e-16999.13uncharacterized protein LOC111452523 [Cucurbita moschata][more]
XP_022998667.14.1e-12596.73uncharacterized protein LOC111493251 [Cucurbita maxima][more]
XP_016902102.11.5e-10666.76PREDICTED: proline-rich protein 36 [Cucumis melo][more]
KGN65746.13.4e-10366.46hypothetical protein Csa_1G524680 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
AT3G46750.12.7e-3335.06unknown protein[more]
AT4G25580.14.0e-0542.62CAP160 protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S4E1K0|A0A1S4E1K0_CUCME9.8e-10766.76proline-rich protein 36 OS=Cucumis melo OX=3656 GN=LOC103497136 PE=4 SV=1[more]
tr|A0A0A0M0K1|A0A0A0M0K1_CUCSA2.3e-10366.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G524680 PE=4 SV=1[more]
tr|A0A2N9HV50|A0A2N9HV50_FAGSY1.0e-6354.55Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43441 PE=4 SV=1[more]
tr|A0A2R6QJ34|A0A2R6QJ34_ACTCH2.6e-5944.99Low-temperature-induced protein OS=Actinidia chinensis var. chinensis OX=1590841... [more]
tr|V4SCB2|V4SCB2_9ROSI4.6e-5648.22Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10029... [more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009737response to abscisic acid
GO:0006950response to stress
Vocabulary: INTERPRO
TermDefinition
IPR037491LTI78/LTI65
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009737 response to abscisic acid
biological_process GO:0006950 response to stress
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12388-RACarg12388-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..402
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..397
NoneNo IPR availablePANTHERPTHR33836:SF2SUBFAMILY NOT NAMEDcoord: 17..499
IPR037491Low-temperature-induced 78kDa/65kDaPANTHERPTHR33836FAMILY NOT NAMEDcoord: 17..499

The following gene(s) are paralogous to this gene:

None