Carg12386 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12386
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	transcription factor PCL1-like
Location	Cucurbita_argyrosperma_scaffold_074 : 686845 .. 690540 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGAGGAGGTGAAGATGAGCGAATATGAGAGCGGCGGTGGTGGTGGTGGTGGTGATGGTGATGAGAACGGAGCTCATGAGGAGAGGGTGTTTGAATGGGAGACGGGTTTGCCGGATGCTGATGATCTTACTCCTCTGTCTCAGACGTTGATTCCGCCGGAGCTTGCGTCGGCATTCAGTATCTCGACAGGGCCGTCTAGGACGGTGATGGATCTTTATCGAGCATCGCAGAATACTCTTTCGAATCTTCGTGGATTTCAATCGCAAGCGTTTTCATCGAATAATTTCAAGTCGTTCAATGATGATCGGACTCGGGATCATGATCCGATGGTTTTTGAAGGAGATGAGACGACAGAGAGAGATGCGGGGTCGGATTCTAGGAAATTGAGGAAGGTTGATTGTGCGGAGGAGGCTGATTCGGCTCTTCGGACTGATAATTCGATGGATGATCCATCGGCTCGGACGTTGAAGAGACCGAGGCTTGTTTGGACGCCGCAATTACATAAGCGTTTTGTGGATGTGGTTGCTCATCTTGGGATTAAGAACGCGGTTCCTAAAACTATTATGCAGTTGATGAACGTGGAGGGATTGACTCGCGAGAATGTTGCGAGTCATCTTCAGAAATATAGGCTTTACTTGAAGAGGATGCAGGGATCTTCCAACGAGGGCCCGTCGTCGCCGGACCGGATTTTCGCTTCCACGCCTGTGCCGCAGAGCTTGCACGAGTCTTCCAACAGTGGCCATGGGAATGGAAATGGGCATTTGCCAGTTCCTACTCCGATGCCCTACGGACCGCCGATGATGCCTATGCCAGTGCTTGGCATGGCAGCACCTGGTCATGCTCACAGTTATATGGGTATGCCTGTCGCTCATCCGGGAAGCGCACAGGGATACCATGGGTTTGAAACCCATCCTTACCATATGATGCATCAGAGAGATTGGTCGGGCAACAAATACGGCTCGATCGTGCCTTACCCTCATCCTCATGTGCCTCCTGGTACTAATGATAAGTGAATTCCGCTAATTTTCAGGTTGGCTGCTTGATCTCATTGAGTTTTTCGTATACCTTATTAATGAGTGTTAGATTAGATTTTACGGGAGCGATAGAGAACATCTTTTGTATTAGAAAATGATTTACTATCGGTTTGATAGGATTCATCATTCGTATGAGGCCTTTTGAGAAGTCCAAAGCAAAGTCATGAGAGCTTATGCTCAAAATGGACAATATCATACCATTGTGGAGAGTCTTCATCTAACAACTTCATCTAACAACGGATCAAAGCCTTGCCCTAAATTTAGCCATATCATTTGAGGTTTAGCCATATCAATAGAATCCTCAAATGTCAAACAAAAGTATTGTGAGCGTTGGAAGACATAGTAAAAAATGACCAAGACTCCAAAAAGAAAAGGAGTCTGAACCTCGATTAAGGGGAGGCGTAATGACTAAGACTCCAAAAAGAAAAGGAGTCTGAACCTCGATTAAGGGGAGGCGTATTTTGTTCGAGGTGAAGTGTTGGATGAAAGTCCCACCTCGGCTAATTTAGGAAATGATCCTGGGTTTATAATCAAGGAATACTATCTCCCTTGGTATGAGGCCTTTTGGGGAAACCAAAGCAAAGGCATGAGAGTTTATGCTCAAAATGGAAAATACCATATCATTGTGGAGAGTAATGTTCATCTAACAGCAATCATTCGTGTTTGCCCTGTTTTTTCCTTTTTTTTAATCTAAAATTGGATTATGCCAGTGGTACTTGCATCGCTAATGAATGGTCTGGATTTGGAGGGGTTTTGCGTTAGGATTTGGAGTACTTCTCGAACTTGGCAACAAACTTCTATATTAGACACGTGAAATGGTGAATCCCAGATAAAATTAAGCCTCGTAAAGCAGTATTATTGAGTTACTGGAAACTGAAAAGCTTTCTTTCTGTCCAAGTGTAGTTAGTAAGACAAGAATTTATGGCATGTTATTGGCTTTAGTGGCGAACTTTAGACACAGGTTTCTGATTTGGTCTTTCGAACTGTTCTCGATAACTGTAGTTAGATGACTTATAAGAAACTGAATATCTGTTACTGTGGAACTAAACTGAAAAAAAAAAAAAAAAAAAAAAAACACAACAAAAACAACTTTTAAAAGACAGTTCCCCAGAAATGTCTGAACTGAAATTTTGTTCTAACATAGCCCAATGGGTAACCCCTTGTTACTTTTTTGGCTTGAATCACAGCGTAGTAACTGTTACCTTTCAGTTTCTGATTCCTCTCTATGCTCTTCACTGCTCAGTTTGATCACTTCTTAAAAATACAGTTAGTTAGATTTGCTTGTTTTGGTCTTTACTGTGTAGCCTCCAATCCAGGACGAGCATGCAGGTAAGAAAGTCCATTAACCCGTAAGATGAAGATTTACTTGATCATAGAGGAAAATCTAAGCAATTAATTCTGTGTTTTTTGTTTAGACGTCCACCTTCAAGTTGTTCAATCAACTGTTCTGCCACAATGACCATCAGCCTCTTGGAGAACTTTTATGCTTCCTGGCTGAAATTTGTATATAAATTTATTGTTTAATCTTCCTTTCTTCTCATGTAATGGCTCCATGGATATTTGAACTGTTATGTTATGTCATGTCCTATGCATATTCATATATCTCCTTTTTTAGTGTACGGATCCAGTAGAACATTGTATGTTGAACATTTTAGGCCAAATCAGTCCTCTTTGAATGAAAGTTCAAGATTAAGCTAAGCGAACTGCAAGCACATTGTAGTGTTTACAAAACTTGGTTGTTTTTATGTATGGAAGTACAAGAAATTTCAATATGCTTGACCTTACTCTAGAACTTTCCCTTCCATAATCCTCTGTGCTTTTAGGACAGCTGCATCAGATCACCATACATGTTATTTGTACTTTCTTTTAACCTTGGAAGTTCTATTACAAATTACAAACTGAAAAGAAGCTACAAATATCATTCAGGTATAATGTATAAGATGCATGAGACTGTAGTTACGGGAGGCAAGAGATGGCCTAATCCCATCACATTGAAATTCTTGCCCATCACCTCTGGTGAATTATAGAAGGATTGAAGGGCACACCAAATGATCCTTCGTCAGTGGAATCGATGTGTGTTTTGTGATTCTCTCCTTCTTAGGATGTCATGAAAGGTTAATATTCCTTTGATGACTGCCTTATTGTTTTCTTTAATATAGCTTGGTAACTGTCTTTGCCTTCATTTTCATATGCACTGAAGCTGTTCTCTTTTGTTGAATTGGTCCTACCATTTCTATTTATTGATATGATTAGTATGTCACTTGCAGATGTCACTCTGGAAGGAATGCTTTCCATAAGGTCCGTGAAATAAACACTGGGTGCCCAGATGCCGATACGCAACGTGTATACGAACATTCGTATCAGTTATATTATTATGTTGTCTACCAGGAACTCAACAATTGAATGCCCTTGAGATATTTAAAATGTATCTCCATTCTAGTTTGTGCTGTAACTCATGAACTTGAATCACAACAGATTTGATATCTGAACCCCATTTTTTGGTTCTTTCTTGTGTCTGCTCTATTGGATATACTCCAGCGAGGCCTCTCGGTTTCTAGACTAATAATGACTGCTGTGATACTGGATTTTACAAGTTCACAGCCACTTAAAATCATTGCTTCATTTCTTCTTCAGAACTTGTATTCAGCATCTCAACAG

mRNA sequence

ATGGGGGAGGAGGTGAAGATGAGCGAATATGAGAGCGGCGGTGGTGGTGGTGGTGGTGATGGTGATGAGAACGGAGCTCATGAGGAGAGGGTGTTTGAATGGGAGACGGGTTTGCCGGATGCTGATGATCTTACTCCTCTGTCTCAGACGTTGATTCCGCCGGAGCTTGCGTCGGCATTCAGTATCTCGACAGGGCCGTCTAGGACGGTGATGGATCTTTATCGAGCATCGCAGAATACTCTTTCGAATCTTCGTGGATTTCAATCGCAAGCGTTTTCATCGAATAATTTCAAGTCGTTCAATGATGATCGGACTCGGGATCATGATCCGATGGTTTTTGAAGGAGATGAGACGACAGAGAGAGATGCGGGGTCGGATTCTAGGAAATTGAGGAAGGTTGATTGTGCGGAGGAGGCTGATTCGGCTCTTCGGACTGATAATTCGATGGATGATCCATCGGCTCGGACGTTGAAGAGACCGAGGCTTGTTTGGACGCCGCAATTACATAAGCGTTTTGTGGATGTGGTTGCTCATCTTGGGATTAAGAACGCGGTTCCTAAAACTATTATGCAGTTGATGAACGTGGAGGGATTGACTCGCGAGAATGTTGCGAGTCATCTTCAGAAATATAGGCTTTACTTGAAGAGGATGCAGGGATCTTCCAACGAGGGCCCGTCGTCGCCGGACCGGATTTTCGCTTCCACGCCTGTGCCGCAGAGCTTGCACGAGTCTTCCAACAGTGGCCATGGGAATGGAAATGGGCATTTGCCAGTTCCTACTCCGATGCCCTACGGACCGCCGATGATGCCTATGCCAGTGCTTGGCATGGCAGCACCTGGTCATGCTCACAGTTATATGGGTATGCCTGTCGCTCATCCGGGAAGCGCACAGGGATACCATGGGTTTGAAACCCATCCTTACCATATGATGCATCAGAGAGATTGGTCGGGCAACAAATACGGCTCGATCGTGCCTTACCCTCATCCTCATGTGCCTCCTGGTACTAATGATAAATGTCACTCTGGAAGGAATGCTTTCCATAAGGTCCGTGAAATAAACACTGGGTGCCCAGATGCCGATACGCAACGTAACTTGTATTCAGCATCTCAACAG

Coding sequence (CDS)

ATGGGGGAGGAGGTGAAGATGAGCGAATATGAGAGCGGCGGTGGTGGTGGTGGTGGTGATGGTGATGAGAACGGAGCTCATGAGGAGAGGGTGTTTGAATGGGAGACGGGTTTGCCGGATGCTGATGATCTTACTCCTCTGTCTCAGACGTTGATTCCGCCGGAGCTTGCGTCGGCATTCAGTATCTCGACAGGGCCGTCTAGGACGGTGATGGATCTTTATCGAGCATCGCAGAATACTCTTTCGAATCTTCGTGGATTTCAATCGCAAGCGTTTTCATCGAATAATTTCAAGTCGTTCAATGATGATCGGACTCGGGATCATGATCCGATGGTTTTTGAAGGAGATGAGACGACAGAGAGAGATGCGGGGTCGGATTCTAGGAAATTGAGGAAGGTTGATTGTGCGGAGGAGGCTGATTCGGCTCTTCGGACTGATAATTCGATGGATGATCCATCGGCTCGGACGTTGAAGAGACCGAGGCTTGTTTGGACGCCGCAATTACATAAGCGTTTTGTGGATGTGGTTGCTCATCTTGGGATTAAGAACGCGGTTCCTAAAACTATTATGCAGTTGATGAACGTGGAGGGATTGACTCGCGAGAATGTTGCGAGTCATCTTCAGAAATATAGGCTTTACTTGAAGAGGATGCAGGGATCTTCCAACGAGGGCCCGTCGTCGCCGGACCGGATTTTCGCTTCCACGCCTGTGCCGCAGAGCTTGCACGAGTCTTCCAACAGTGGCCATGGGAATGGAAATGGGCATTTGCCAGTTCCTACTCCGATGCCCTACGGACCGCCGATGATGCCTATGCCAGTGCTTGGCATGGCAGCACCTGGTCATGCTCACAGTTATATGGGTATGCCTGTCGCTCATCCGGGAAGCGCACAGGGATACCATGGGTTTGAAACCCATCCTTACCATATGATGCATCAGAGAGATTGGTCGGGCAACAAATACGGCTCGATCGTGCCTTACCCTCATCCTCATGTGCCTCCTGGTACTAATGATAAATGTCACTCTGGAAGGAATGCTTTCCATAAGGTCCGTGAAATAAACACTGGGTGCCCAGATGCCGATACGCAACGTAACTTGTATTCAGCATCTCAACAG

Protein sequence

MGEEVKMSEYESGGGGGGGDGDENGAHEERVFEWETGLPDADDLTPLSQTLIPPELASAFSISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGDETTERDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPQSLHESSNSGHGNGNGHLPVPTPMPYGPPMMPMPVLGMAAPGHAHSYMGMPVAHPGSAQGYHGFETHPYHMMHQRDWSGNKYGSIVPYPHPHVPPGTNDKCHSGRNAFHKVREINTGCPDADTQRNLYSASQQ

Homology

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BLAST of Carg12386 vs. NCBI nr
Match: XP_022949552.1 (transcription factor BOA-like [Cucurbita moschata])

HSP 1 Score: 577.0 bits (1486), Expect = 4.5e-161
Identity = 337/338 (99.70%), Postives = 337/338 (99.70%), Query Frame = 0


Query: 1   MGEEVKMSEYEXXXXXXXXXXXXXGAHEERVFEWETGLPDADDLTPLSQTLIPPELASAF 60
           MGEEVKMSEYEXXXXXXXXXXXXXGAHEERVFEWETGLPDADDLTPLSQTLIPPELASAF
Sbjct: 1   MGEEVKMSEYEXXXXXXXXXXXXXGAHEERVFEWETGLPDADDLTPLSQTLIPPELASAF 60

Query: 61  SISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGDETTE 120
           SISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGDETTE
Sbjct: 61  SISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGDETTE 120

Query: 121 RDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG 180
           RDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG
Sbjct: 121 RDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG 180

Query: 181 IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPQS 240
           IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPQS
Sbjct: 181 IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPQS 240

Query: 241 LHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAPGHAHSYMGMPVAHPGSAQGYH 300
           LHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAPGHAHSYMGMPVAHPGSAQGYH
Sbjct: 241 LHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAPGHAHSYMGMPVAHPGSAQGYH 300

Query: 301 GFETHPYHMMHQRDWSGNKYGSIVPYPHPHVPPGTNDK 339
           GFETHPYHMMHQRDWSGNKYGSIVPYPHPHVPP TNDK
Sbjct: 301 GFETHPYHMMHQRDWSGNKYGSIVPYPHPHVPPSTNDK 338

[Close]

BLAST of Carg12386 vs. NCBI nr
Match: XP_022998558.1 (transcription factor BOA-like [Cucurbita maxima])

HSP 1 Score: 565.1 bits (1455), Expect = 1.8e-157
Identity = 334/340 (98.24%), Postives = 334/340 (98.24%), Query Frame = 0


Query: 1   MGEEVKMSEYE--XXXXXXXXXXXXXGAHEERVFEWETGLPDADDLTPLSQTLIPPELAS 60
           MGEEVKMSEYE  XXXXXXXXXXXXX  HEERVFEWETGLPDADDLTPLSQTLIPPELAS
Sbjct: 1   MGEEVKMSEYEXXXXXXXXXXXXXXXXXHEERVFEWETGLPDADDLTPLSQTLIPPELAS 60

Query: 61  AFSISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGDET 120
           AFSISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGDE 
Sbjct: 61  AFSISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGDEM 120

Query: 121 TERDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAH 180
           TERDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAH
Sbjct: 121 TERDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAH 180

Query: 181 LGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVP 240
           LGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVP
Sbjct: 181 LGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVP 240

Query: 241 QSLHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAPGHAHSYMGMPVAHPGSAQG 300
           QSLHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAPGHAHSYMGMPVAHPGSAQG
Sbjct: 241 QSLHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAPGHAHSYMGMPVAHPGSAQG 300

Query: 301 YHGFETHPYHMMHQRDWSGNKYGSIVPYPHPHVPPGTNDK 339
           YHGFETHPYHMMHQRDWSGNKYGSIVPYPHPHVPP TNDK
Sbjct: 301 YHGFETHPYHMMHQRDWSGNKYGSIVPYPHPHVPPSTNDK 340

[Close]

BLAST of Carg12386 vs. NCBI nr
Match: XP_023523138.1 (transcription factor BOA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 563.1 bits (1450), Expect = 6.8e-157
Identity = 334/342 (97.66%), Postives = 334/342 (97.66%), Query Frame = 0


Query: 1   MGEEVKMSEYE----XXXXXXXXXXXXXGAHEERVFEWETGLPDADDLTPLSQTLIPPEL 60
           MGEEVKMSEYE    XXXXXXXXXXXXX    ERVFEWETGLPDADDLTPLSQTLIPPEL
Sbjct: 1   MGEEVKMSEYEXXXXXXXXXXXXXXXXXXXXXERVFEWETGLPDADDLTPLSQTLIPPEL 60

Query: 61  ASAFSISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGD 120
           ASAFSISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGD
Sbjct: 61  ASAFSISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGD 120

Query: 121 ETTERDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVV 180
           ETTERDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVV
Sbjct: 121 ETTERDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVV 180

Query: 181 AHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTP 240
           AHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTP
Sbjct: 181 AHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTP 240

Query: 241 VPQSLHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAPGHAHSYMGMPVAHPGSA 300
           VPQSLHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAPGHAHSYMGMPVAHPGSA
Sbjct: 241 VPQSLHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAPGHAHSYMGMPVAHPGSA 300

Query: 301 QGYHGFETHPYHMMHQRDWSGNKYGSIVPYPHPHVPPGTNDK 339
           QGYHGFETHPYHMMHQRDWSGNKYGSIVPYPHPHVPPGTNDK
Sbjct: 301 QGYHGFETHPYHMMHQRDWSGNKYGSIVPYPHPHVPPGTNDK 342

[Close]

BLAST of Carg12386 vs. NCBI nr
Match: XP_008457454.1 (PREDICTED: transcription factor PCL1-like [Cucumis melo] >XP_008457455.1 PREDICTED: transcription factor PCL1-like [Cucumis melo])

HSP 1 Score: 521.5 bits (1342), Expect = 2.3e-144
Identity = 308/338 (91.12%), Postives = 316/338 (93.49%), Query Frame = 0


Query: 1   MGEEVKMSEYEXXXXXXXXXXXXXGAHEERVFEWETGLPDADDLTPLSQTLIPPELASAF 60
           MGEEVKM+EYE XXXXXXXXXXXX AHEERVFEWETGLPDADDLTPLSQTLIPPELASAF
Sbjct: 1   MGEEVKMAEYE-XXXXXXXXXXXXXAHEERVFEWETGLPDADDLTPLSQTLIPPELASAF 60

Query: 61  SISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGDETTE 120
           SISTGP RT+MD+ RASQNTLSNLRGFQ+QAFSSNNFKSFNDDRT+DHDPMV EGDE TE
Sbjct: 61  SISTGPCRTLMDVNRASQNTLSNLRGFQAQAFSSNNFKSFNDDRTQDHDPMVVEGDEATE 120

Query: 121 RDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG 180
           RDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG
Sbjct: 121 RDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG 180

Query: 181 IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPQS 240
           IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPQ+
Sbjct: 181 IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPQT 240

Query: 241 LHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAPGHAHSYMGMPVAHPGSAQGYH 300
           LHES     XXXXXXXXXXXXXXXXXXXXXXXXXX        SYMGMPVAHPGSAQGY 
Sbjct: 241 LHESTNSGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYMGMPVAHPGSAQGYP 300

Query: 301 GFETHPYHMMHQRDWSGNKYGSIVPYPHPHVPPGTNDK 339
           GFETHP++MMHQRDWSGNKY SIVPYPHPHVPP TNDK
Sbjct: 301 GFETHPFNMMHQRDWSGNKYSSIVPYPHPHVPPNTNDK 337

[Close]

BLAST of Carg12386 vs. NCBI nr
Match: XP_011658264.1 (PREDICTED: transcription factor PCL1-like [Cucumis sativus] >XP_011658269.1 PREDICTED: transcription factor PCL1-like [Cucumis sativus] >KGN65744.1 hypothetical protein Csa_1G524660 [Cucumis sativus])

HSP 1 Score: 516.2 bits (1328), Expect = 9.5e-143
Identity = 294/338 (86.98%), Postives = 302/338 (89.35%), Query Frame = 0


Query: 1   MGEEVKMSEYEXXXXXXXXXXXXXGAHEERVFEWETGLPDADDLTPLSQTLIPPELASAF 60
           MGEEVKM+EYE              AHEERVFEWETGLPDADDLTPLSQTLIPPELASAF
Sbjct: 1   MGEEVKMAEYESGGGVGGEDESC--AHEERVFEWETGLPDADDLTPLSQTLIPPELASAF 60

Query: 61  SISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGDETTE 120
           SISTGP RT+MD+ RASQNTLSNLRGFQ+QAFSSNNFKSFNDDRT+DHD MV EGDE TE
Sbjct: 61  SISTGPCRTLMDVNRASQNTLSNLRGFQAQAFSSNNFKSFNDDRTQDHDAMVVEGDEATE 120

Query: 121 RDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG 180
           RDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG
Sbjct: 121 RDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG 180

Query: 181 IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPQS 240
           IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVP +
Sbjct: 181 IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPPT 240

Query: 241 LHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAPGHAHSYMGMPVAHPGSAQGYH 300
           LHES     XXXXXXXXXXXXXXXXXXXXXXXXXX        SYMGMPVAHPGSAQGY 
Sbjct: 241 LHESTNSGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYMGMPVAHPGSAQGYP 300

Query: 301 GFETHPYHMMHQRDWSGNKYGSIVPYPHPHVPPGTNDK 339
           GFETHP++MMHQRDWSGNKY SIVPYPHPHVPP TNDK
Sbjct: 301 GFETHPFNMMHQRDWSGNKYSSIVPYPHPHVPPNTNDK 336

[Close]

BLAST of Carg12386 vs. TAIR10
Match: AT5G59570.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 209.5 bits (532), Expect = 3.5e-54
Identity = 133/244 (54.51%), Postives = 157/244 (64.34%), Query Frame = 0


Query: 1   MGEEVKMSEYEXXXXXXXXXXXXXGAHEERVFEWETGLPDADDLTPLSQTLIPPELASAF 60
           MG+EV +S+Y              G  E R+ EWE GLP+ DDLTPLSQ L+P  LA AF
Sbjct: 1   MGKEVMVSDY-----GDDDGEDAGGGDEYRIPEWEIGLPNGDDLTPLSQYLVPSILALAF 60

Query: 61  SISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGDETTE 120
           S+    SRT+ D+ RASQ TLS+LR       SS N  S  ++            D    
Sbjct: 61  SMIPERSRTIHDVNRASQITLSSLR-------SSTNASSVMEEVV----------DRVES 120

Query: 121 RDAGSDSRKLRKVD----CAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVV 180
              GSD +K +K D     A E  +A   D+  +D S +T KRPRLVWTPQLHKRFVDVV
Sbjct: 121 SVPGSDPKKQKKSDGGEAAAVEDSTAEEGDSGPEDASGKTSKRPRLVWTPQLHKRFVDVV 180

Query: 181 AHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQG-SSNEGP-SSPDRIFAS 239
           AHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKR+QG ++ E P SS D++F+S
Sbjct: 181 AHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLTTEEDPYSSSDQLFSS 222

[Close]

BLAST of Carg12386 vs. TAIR10
Match: AT3G46640.3 (Homeodomain-like superfamily protein)

HSP 1 Score: 203.8 bits (517), Expect = 1.9e-52
Identity = 122/238 (51.26%), Postives = 141/238 (59.24%), Query Frame = 0


Query: 1   MGEEVKMSEYEXXXXXXXXXXXXXGAHEERVFEWETGLPDADDLTPLSQTLIPPELASAF 60
           MGEEV+MS+Y+                 +RV EWE GLP  +DL  LS +LIPP LA AF
Sbjct: 1   MGEEVQMSDYD------------VSGDGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAF 60

Query: 61  SISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGDETTE 120
           SI+   SRT+ D+ RAS+ TLS                                      
Sbjct: 61  SITPERSRTIQDVNRASETTLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 RDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG 180
                        D A  A+     D+  +D S +TLKRPRLVWTPQLHKRFVDVVAHLG
Sbjct: 121 XXXXXXXXXXXXXDSAMAAEEG---DSGTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLG 180

Query: 181 IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVP 239
           IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQG +NEGPS+ D++F+STPVP
Sbjct: 181 IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLTNEGPSASDKLFSSTPVP 223

[Close]

BLAST of Carg12386 vs. TAIR10
Match: AT3G10760.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 151.8 bits (382), Expect = 8.6e-37
Identity = 101/216 (46.76%), Postives = 116/216 (53.70%), Query Frame = 0


Query: 34  WETGLPDADDLTPLSQTLIPPELASAFSIST-------GPSRTVMDLYRASQNTLSNLRG 93
           WE  LP  ++L P+SQ+LI P+LA AF I T                             
Sbjct: 12  WEEELPSPEELMPISQSLISPDLALAFDIRTPNHXXXXXXXXXXXXXXXXXXXXXXXXXX 71

Query: 94  FQSQAFSSNNFKSFNDDRTRDHDPMVFEGDETTERDAGSDSRKLRKVDCAEEADSALRTD 153
             SQA SS  F                                      A+ AD  L + 
Sbjct: 72  XSSQANSSAEF-------------------------------------AADSAD--LGSG 131

Query: 154 NSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASH 213
            +  D  ARTLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASH
Sbjct: 132 GAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH 188

Query: 214 LQKYRLYLKRMQGSSNEGPS----SPDRIFASTPVP 239
           LQKYRLYLKRMQG S+ G +    + DR+FAS+PVP
Sbjct: 192 LQKYRLYLKRMQGLSSGGGAGSDPATDRLFASSPVP 188

[Close]

BLAST of Carg12386 vs. TAIR10
Match: AT2G40970.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 146.7 bits (369), Expect = 2.8e-35
Identity = 98/219 (44.75%), Postives = 111/219 (50.68%), Query Frame = 0


Query: 34  WETGLPDADDLTPLSQTLIPPELASAFSIST-----GPSRTVMDLYRASQNTLSNLRGFQ 93
           WE  LP  ++L P+SQTLI P LA AF I +     G  RT    ++             
Sbjct: 12  WEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKLXXXXXXXXXXX 71

Query: 94  SQAFSSNNFKSFNDDRTRDHDPMVFEGDETTERDAGSDSRKLRKVDCAEEADSALRTDNS 153
                         D T                D GS                      S
Sbjct: 72  XXXXXXXXXXXXXXDST----------------DLGS---------------------GS 131

Query: 154 MDDPSARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQ 213
           +    ARTLKRPRLVWTPQLHKRFVD V HLGIKNAVPKTIMQLM+VEGLTRENVASHLQ
Sbjct: 132 IGGEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQ 191

Query: 214 KYRLYLKRMQGSSNEG---------PSSPDRIFASTPVP 239
           KYRLYL+RMQG +  G          S+ DR+FAS+PVP
Sbjct: 192 KYRLYLRRMQGGNGNGITGGHVIVSDSATDRLFASSPVP 193

[Close]

BLAST of Carg12386 vs. TAIR10
Match: AT5G05090.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 140.6 bits (353), Expect = 2.0e-33
Identity = 94/207 (45.41%), Postives = 110/207 (53.14%), Query Frame = 0


Query: 33  EWETGLPDADDLTPLSQTLIPPELASAFSISTGPSRTVMDLYRASQNTLSNLRGFQSQAF 92
           +WE  LP  ++L PLSQ+LI P+LA AF           DL+R                 
Sbjct: 11  KWEEELPSPEELIPLSQSLITPDLAIAF-----------DLHR----------------- 70

Query: 93  SSNNFKSFNDDRTRDHDPMVFEGDETTERDAGSDSRKLRKVDCAEEADSALRTDNSMDDP 152
            +NN  S                            + L +    +   SA    +S  D 
Sbjct: 71  -NNNSNS---------------------------GQPLPQTTPPQPNSSAEIAGDSTGDE 130

Query: 153 SARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 212
            ARTLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRL
Sbjct: 131 PARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 161

Query: 213 YLKRMQ-GSSNEGPSSPDRIFASTPVP 239
           YLKRM+             +FAS+PVP
Sbjct: 191 YLKRMKXXXXXXXXXXXXHLFASSPVP 161

[Close]

BLAST of Carg12386 vs. Swiss-Prot
Match: sp|Q9LTH4|PCLL_ARATH (Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 6.2e-53
Identity = 133/244 (54.51%), Postives = 157/244 (64.34%), Query Frame = 0


Query: 1   MGEEVKMSEYEXXXXXXXXXXXXXGAHEERVFEWETGLPDADDLTPLSQTLIPPELASAF 60
           MG+EV +S+Y              G  E R+ EWE GLP+ DDLTPLSQ L+P  LA AF
Sbjct: 1   MGKEVMVSDY-----GDDDGEDAGGGDEYRIPEWEIGLPNGDDLTPLSQYLVPSILALAF 60

Query: 61  SISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGDETTE 120
           S+    SRT+ D+ RASQ TLS+LR       SS N  S  ++            D    
Sbjct: 61  SMIPERSRTIHDVNRASQITLSSLR-------SSTNASSVMEEVV----------DRVES 120

Query: 121 RDAGSDSRKLRKVD----CAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVV 180
              GSD +K +K D     A E  +A   D+  +D S +T KRPRLVWTPQLHKRFVDVV
Sbjct: 121 SVPGSDPKKQKKSDGGEAAAVEDSTAEEGDSGPEDASGKTSKRPRLVWTPQLHKRFVDVV 180

Query: 181 AHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQG-SSNEGP-SSPDRIFAS 239
           AHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKR+QG ++ E P SS D++F+S
Sbjct: 181 AHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLTTEEDPYSSSDQLFSS 222

[Close]

BLAST of Carg12386 vs. Swiss-Prot
Match: sp|Q9SNB4|PCL1_ARATH (Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.7e-50
Identity = 143/342 (41.81%), Postives = 169/342 (49.42%), Query Frame = 0


Query: 1   MGEEVKMSEYEXXXXXXXXXXXXXGAHEERVFEWETGLPDADDLTPLSQTLIPPELASAF 60
           MGEEV+MS+Y+                 +RV EWE GLP  +DL  LS +LIPP LA AF
Sbjct: 1   MGEEVQMSDYD------------VSGDGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAF 60

Query: 61  SISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGDETTE 120
           SI+   SRT+ D+ RAS+ TLS                                      
Sbjct: 61  SITPERSRTIQDVNRASETTLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 RDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG 180
                        D A  A+     D+  +D S +TLKRPRLVWTPQLHKRFVDVVAHLG
Sbjct: 121 XXXXXXXXXXXXXDSAMAAEEG---DSGTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLG 180

Query: 181 IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPQS 240
           IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQG +NEGPS+ D++F+STPVP  
Sbjct: 181 IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLTNEGPSASDKLFSSTPVPPQ 240

Query: 241 LHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAPGHAHSYMG------------- 300
             +                                M  P +AH +MG             
Sbjct: 241 SFQD-------IGGGGGSSGNVGVPIPGAYGTQQMMQMPVYAH-HMGXXXXXXXXXXXXX 300

Query: 301 --MPVAHPGSAQGYHGFETHPYHMMHQRDWSGNKYGSIVPYP 328
                     A G   FE++PY MM Q     NK+GS+  YP
Sbjct: 301 XXXXXXXXXGAGGNGAFESNPY-MMQQ-----NKFGSMASYP 313

[Close]

BLAST of Carg12386 vs. Swiss-Prot
Match: sp|Q94DH3|PCL1_ORYSJ (Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.9e-44
Identity = 116/244 (47.54%), Postives = 129/244 (52.87%), Query Frame = 0


Query: 1   MGEEVKMSEYEXXXXXXXXXXXXXGAHEERVFEWETGLPDADDLTPLSQTLIPPELASAF 60
           MGEE    EYE             G  +ERV EWETGLP AD+LTPLSQ L+P  LA+AF
Sbjct: 1   MGEEAP-EEYE-----------LGGGEDERVMEWETGLPGADELTPLSQPLVPAGLAAAF 60

Query: 61  SISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGDETTE 120
            I   P RT++D++RAS  T+S                                      
Sbjct: 61  RIPPEPGRTLLDVHRASAATVSR-----------------------------XXXXXXXX 120

Query: 121 RDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG 180
                                                   RLVWTPQLHKRFV+VVAHLG
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVWTPQLHKRFVEVVAHLG 180

Query: 181 IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPQ- 240
           +KNAVPKTIMQLMNVEGLTRENVASHLQKYRLY+KRMQG SNEGPS  D IFASTPVP  
Sbjct: 181 MKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQGLSNEGPSPSDHIFASTPVPHA 203

Query: 241 SLHE 244
           SLH+
Sbjct: 241 SLHD 203

[Close]

BLAST of Carg12386 vs. Swiss-Prot
Match: sp|O22210|MYBC1_ARATH (Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 5.0e-34
Identity = 98/219 (44.75%), Postives = 111/219 (50.68%), Query Frame = 0


Query: 34  WETGLPDADDLTPLSQTLIPPELASAFSIST-----GPSRTVMDLYRASQNTLSNLRGFQ 93
           WE  LP  ++L P+SQTLI P LA AF I +     G  RT    ++             
Sbjct: 12  WEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKLXXXXXXXXXXX 71

Query: 94  SQAFSSNNFKSFNDDRTRDHDPMVFEGDETTERDAGSDSRKLRKVDCAEEADSALRTDNS 153
                         D T                D GS                      S
Sbjct: 72  XXXXXXXXXXXXXXDST----------------DLGS---------------------GS 131

Query: 154 MDDPSARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQ 213
           +    ARTLKRPRLVWTPQLHKRFVD V HLGIKNAVPKTIMQLM+VEGLTRENVASHLQ
Sbjct: 132 IGGEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQ 191

Query: 214 KYRLYLKRMQGSSNEG---------PSSPDRIFASTPVP 239
           KYRLYL+RMQG +  G          S+ DR+FAS+PVP
Sbjct: 192 KYRLYLRRMQGGNGNGITGGHVIVSDSATDRLFASSPVP 193

[Close]

BLAST of Carg12386 vs. Swiss-Prot
Match: sp|B8AEH1|ORR23_ORYSI (Two-component response regulator ORR23 OS=Oryza sativa subsp. indica OX=39946 GN=RR23 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 6.3e-21
Identity = 55/102 (53.92%), Postives = 69/102 (67.65%), Query Frame = 0


Query: 122 DAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLGI 181
           D      K RK  C+EE D        +DDPSA   K+PR+VW+ +LH++FV  V  LGI
Sbjct: 179 DQSGRPSKKRKEYCSEEEDEGEVNTQDIDDPSAP--KKPRVVWSVELHRKFVAAVNQLGI 238

Query: 182 KNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNE 224
             AVPK I++LMNVE LTRENVASHLQKYRLYLKR+   +++
Sbjct: 239 DKAVPKRILELMNVEKLTRENVASHLQKYRLYLKRLSAVASQ 278

[Close]

BLAST of Carg12386 vs. TrEMBL
Match: tr|A0A1S3C5J0|A0A1S3C5J0_CUCME (transcription factor PCL1-like OS=Cucumis melo OX=3656 GN=LOC103497139 PE=4 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 1.5e-144
Identity = 308/338 (91.12%), Postives = 316/338 (93.49%), Query Frame = 0


Query: 1   MGEEVKMSEYEXXXXXXXXXXXXXGAHEERVFEWETGLPDADDLTPLSQTLIPPELASAF 60
           MGEEVKM+EYE XXXXXXXXXXXX AHEERVFEWETGLPDADDLTPLSQTLIPPELASAF
Sbjct: 1   MGEEVKMAEYE-XXXXXXXXXXXXXAHEERVFEWETGLPDADDLTPLSQTLIPPELASAF 60

Query: 61  SISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGDETTE 120
           SISTGP RT+MD+ RASQNTLSNLRGFQ+QAFSSNNFKSFNDDRT+DHDPMV EGDE TE
Sbjct: 61  SISTGPCRTLMDVNRASQNTLSNLRGFQAQAFSSNNFKSFNDDRTQDHDPMVVEGDEATE 120

Query: 121 RDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG 180
           RDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG
Sbjct: 121 RDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG 180

Query: 181 IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPQS 240
           IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPQ+
Sbjct: 181 IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPQT 240

Query: 241 LHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAPGHAHSYMGMPVAHPGSAQGYH 300
           LHES     XXXXXXXXXXXXXXXXXXXXXXXXXX        SYMGMPVAHPGSAQGY 
Sbjct: 241 LHESTNSGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYMGMPVAHPGSAQGYP 300

Query: 301 GFETHPYHMMHQRDWSGNKYGSIVPYPHPHVPPGTNDK 339
           GFETHP++MMHQRDWSGNKY SIVPYPHPHVPP TNDK
Sbjct: 301 GFETHPFNMMHQRDWSGNKYSSIVPYPHPHVPPNTNDK 337

[Close]

BLAST of Carg12386 vs. TrEMBL
Match: tr|A0A0A0LXF6|A0A0A0LXF6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G524660 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 6.3e-143
Identity = 294/338 (86.98%), Postives = 302/338 (89.35%), Query Frame = 0


Query: 1   MGEEVKMSEYEXXXXXXXXXXXXXGAHEERVFEWETGLPDADDLTPLSQTLIPPELASAF 60
           MGEEVKM+EYE              AHEERVFEWETGLPDADDLTPLSQTLIPPELASAF
Sbjct: 1   MGEEVKMAEYESGGGVGGEDESC--AHEERVFEWETGLPDADDLTPLSQTLIPPELASAF 60

Query: 61  SISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGDETTE 120
           SISTGP RT+MD+ RASQNTLSNLRGFQ+QAFSSNNFKSFNDDRT+DHD MV EGDE TE
Sbjct: 61  SISTGPCRTLMDVNRASQNTLSNLRGFQAQAFSSNNFKSFNDDRTQDHDAMVVEGDEATE 120

Query: 121 RDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG 180
           RDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG
Sbjct: 121 RDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG 180

Query: 181 IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPQS 240
           IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVP +
Sbjct: 181 IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPPT 240

Query: 241 LHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAPGHAHSYMGMPVAHPGSAQGYH 300
           LHES     XXXXXXXXXXXXXXXXXXXXXXXXXX        SYMGMPVAHPGSAQGY 
Sbjct: 241 LHESTNSGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYMGMPVAHPGSAQGYP 300

Query: 301 GFETHPYHMMHQRDWSGNKYGSIVPYPHPHVPPGTNDK 339
           GFETHP++MMHQRDWSGNKY SIVPYPHPHVPP TNDK
Sbjct: 301 GFETHPFNMMHQRDWSGNKYSSIVPYPHPHVPPNTNDK 336

[Close]

BLAST of Carg12386 vs. TrEMBL
Match: tr|F6GUZ0|F6GUZ0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g05120 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.5e-96
Identity = 221/327 (67.58%), Postives = 251/327 (76.76%), Query Frame = 0


Query: 1   MGEEVKMSEYEXXXXXXXXXXXXXGAHEERVFEWETGLPDADDLTPLSQTLIPPELASAF 60
           MGEEV+MS+               G  +ERV EWE GLP ADDLTPLSQ LIPPELASAF
Sbjct: 1   MGEEVRMSDIN----------GGDGGDDERVLEWEAGLPAADDLTPLSQPLIPPELASAF 60

Query: 61  SISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGDETTE 120
           SI+  P RT++++ RASQ+T S +RG QS +FSSNNFKSFN++R R  +P V E +ET +
Sbjct: 61  SITPEPCRTLLEVNRASQSTFSTIRG-QSHSFSSNNFKSFNEERNR--EPAVVEPEETGD 120

Query: 121 RD-AGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHL 180
           RD +GS+SRK+RKVDCAEEADSA+RT+NS DDPSARTLKRPRLVWTPQLHKRFVDVV HL
Sbjct: 121 RDGSGSESRKVRKVDCAEEADSAMRTENSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHL 180

Query: 181 GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPQ 240
           GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQG SNEGPSS D +FASTPVPQ
Sbjct: 181 GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDHLFASTPVPQ 240

Query: 241 SLHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAPGHAHSYMGMPVAHPGSAQGY 300
           SLHES     XXXXXXXXXXXXXXXXX         +    H H  MGM  + PG   GY
Sbjct: 241 SLHESGGSVHXXXXXXXXXXXXXXXXXGQTMMHMPVLGV-SHGHGQMGM--SGPG---GY 300

Query: 301 HGFET-HPYHMMHQRDWSGNKYGSIVP 326
           HG+E+ HPY+M+ QRDWS   Y ++ P
Sbjct: 301 HGYESHHPYNMLQQRDWSVVSYPNVGP 308

[Close]

BLAST of Carg12386 vs. TrEMBL
Match: tr|A5BDT9|A5BDT9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_006762 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.5e-96
Identity = 221/327 (67.58%), Postives = 251/327 (76.76%), Query Frame = 0


Query: 1   MGEEVKMSEYEXXXXXXXXXXXXXGAHEERVFEWETGLPDADDLTPLSQTLIPPELASAF 60
           MGEEV+MS+               G  +ERV EWE GLP ADDLTPLSQ LIPPELASAF
Sbjct: 52  MGEEVRMSDIN----------GGDGGDDERVLEWEAGLPAADDLTPLSQPLIPPELASAF 111

Query: 61  SISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGDETTE 120
           SI+  P RT++++ RASQ+T S +RG QS +FSSNNFKSFN++R R  +P V E +ET +
Sbjct: 112 SITPEPCRTLLEVNRASQSTFSTIRG-QSHSFSSNNFKSFNEERNR--EPAVVEPEETGD 171

Query: 121 RD-AGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHL 180
           RD +GS+SRK+RKVDCAEEADSA+RT+NS DDPSARTLKRPRLVWTPQLHKRFVDVV HL
Sbjct: 172 RDGSGSESRKVRKVDCAEEADSAMRTENSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHL 231

Query: 181 GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPQ 240
           GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQG SNEGPSS D +FASTPVPQ
Sbjct: 232 GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDHLFASTPVPQ 291

Query: 241 SLHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAPGHAHSYMGMPVAHPGSAQGY 300
           SLHES     XXXXXXXXXXXXXXXXX         +    H H  MGM  + PG   GY
Sbjct: 292 SLHESGGSVHXXXXXXXXXXXXXXXXXGQTMMHMPVLGV-SHGHGQMGM--SGPG---GY 351

Query: 301 HGFET-HPYHMMHQRDWSGNKYGSIVP 326
           HG+E+ HPY+M+ QRDWS   Y ++ P
Sbjct: 352 HGYESHHPYNMLQQRDWSVVSYPNVGP 359

[Close]

BLAST of Carg12386 vs. TrEMBL
Match: tr|A0A2P5DQN6|A0A2P5DQN6_PARAD (Octamer-binding transcription factor OS=Parasponia andersonii OX=3476 GN=PanWU01x14_042210 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 8.3e-95
Identity = 224/331 (67.67%), Postives = 240/331 (72.51%), Query Frame = 0


Query: 1   MGEEVKMSEYEXXXXXXXXXXXXXGAHEERVFEWETGLPDADDLTPLSQTLIPPELASAF 60
           MGEEVKMS+YE             G  EERV EWE GLP  DDLTPLSQ LIPPELASAF
Sbjct: 1   MGEEVKMSDYE-------GGTDDGGGDEERVLEWEAGLPTLDDLTPLSQPLIPPELASAF 60

Query: 61  SISTGPSRTVMDLYRASQNTLSNLRGFQSQAFSSNNFKSFNDDRTRDHDPMVFEGDETTE 120
           SIS    RT++D+ RAS++T S+LRG QSQAFSSNNFKSF D         +    E   
Sbjct: 61  SISPVQYRTLIDVNRASRDTFSSLRGNQSQAFSSNNFKSFGDXXXXXXXXSMVV--ERXR 120

Query: 121 RDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG 180
              GSDSRK RK+DC EEAD AL  +NS DDPSARTLKRPRLVWTPQLHKRFVDVVAHLG
Sbjct: 121 DGTGSDSRKSRKIDCVEEADLALPLENSTDDPSARTLKRPRLVWTPQLHKRFVDVVAHLG 180

Query: 181 IKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPQS 240
           IK+AVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQG SNE P S D++F+STP PQS
Sbjct: 181 IKSAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEDPPSSDQLFSSTPAPQS 240

Query: 241 LHE---SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAPGHAHSYMGMPVAHPGSAQ 300
           LHE   S         XXXXXXXXXXXXXXXXXXXXXX             PV  P  A 
Sbjct: 241 LHESGGSGHHPPHASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGAPNGAV 300

Query: 301 GYHGFETHPYHMMHQRDWSGNKYGSIVPYPH 329
           GYHGFE+HPY MM QRDWSGNKYGS+V YPH
Sbjct: 301 GYHGFESHPYSMMQQRDWSGNKYGSVVAYPH 322

The following BLAST results are available for this feature:

BLAST of Carg12386 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949552.1	4.5e-161	99.70	transcription factor BOA-like [Cucurbita moschata]	[more]
XP_022998558.1	1.8e-157	98.24	transcription factor BOA-like [Cucurbita maxima]	[more]
XP_023523138.1	6.8e-157	97.66	transcription factor BOA-like [Cucurbita pepo subsp. pepo]	[more]
XP_008457454.1	2.3e-144	91.12	PREDICTED: transcription factor PCL1-like [Cucumis melo] >XP_008457455.1 PREDICT...	[more]
XP_011658264.1	9.5e-143	86.98	PREDICTED: transcription factor PCL1-like [Cucumis sativus] >XP_011658269.1 PRED...	[more]

BLAST of Carg12386 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59570.1	3.5e-54	54.51	Homeodomain-like superfamily protein	[more]
AT3G46640.3	1.9e-52	51.26	Homeodomain-like superfamily protein	[more]
AT3G10760.1	8.6e-37	46.76	Homeodomain-like superfamily protein	[more]
AT2G40970.1	2.8e-35	44.75	Homeodomain-like superfamily protein	[more]
AT5G05090.1	2.0e-33	45.41	Homeodomain-like superfamily protein	[more]

BLAST of Carg12386 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LTH4\|PCLL_ARATH	6.2e-53	54.51	Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1	[more]
sp\|Q9SNB4\|PCL1_ARATH	1.7e-50	41.81	Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1	[more]
sp\|Q94DH3\|PCL1_ORYSJ	6.9e-44	47.54	Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 ...	[more]
sp\|O22210\|MYBC1_ARATH	5.0e-34	44.75	Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1	[more]
sp\|B8AEH1\|ORR23_ORYSI	6.3e-21	53.92	Two-component response regulator ORR23 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]

BLAST of Carg12386 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C5J0\|A0A1S3C5J0_CUCME	1.5e-144	91.12	transcription factor PCL1-like OS=Cucumis melo OX=3656 GN=LOC103497139 PE=4 SV=1	[more]
tr\|A0A0A0LXF6\|A0A0A0LXF6_CUCSA	6.3e-143	86.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G524660 PE=4 SV=1	[more]
tr\|F6GUZ0\|F6GUZ0_VITVI	7.5e-96	67.58	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g05120 PE=4 SV=...	[more]
tr\|A5BDT9\|A5BDT9_VITVI	7.5e-96	67.58	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_006762 PE=4 SV=1	[more]
tr\|A0A2P5DQN6\|A0A2P5DQN6_PARAD	8.3e-95	67.67	Octamer-binding transcription factor OS=Parasponia andersonii OX=3476 GN=PanWU01...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR006447	Myb_dom_plants
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12386-RA	Carg12386-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 162..211 e-value: 3.8E-8 score: 33.3
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 156..218 e-value: 6.7E-31 score: 108.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..259
None	No IPR available	PANTHER	PTHR31442:SF12	TRANSCRIPTION FACTOR BOA-RELATED	coord: 24..327
None	No IPR available	PANTHER	PTHR31442	FAMILY NOT NAMED	coord: 24..327
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 160..212 e-value: 1.9E-23 score: 80.5
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 156..215 score: 10.061
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 156..216

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12386	Cla008221	Watermelon (97103) v1	carwmB0440
Carg12386	Cla013322	Watermelon (97103) v1	carwmB0444
Carg12386	Csa1G524660	Cucumber (Chinese Long) v2	carcuB0471
Carg12386	Csa6G190220	Cucumber (Chinese Long) v2	carcuB0475
Carg12386	MELO3C020611	Melon (DHL92) v3.5.1	carmeB0449
Carg12386	MELO3C025894	Melon (DHL92) v3.5.1	carmeB0446
Carg12386	ClCG02G019950	Watermelon (Charleston Gray)	carwcgB0435
Carg12386	ClCG03G001320	Watermelon (Charleston Gray)	carwcgB0436
Carg12386	CSPI01G23290	Wild cucumber (PI 183967)	carcpiB0476
Carg12386	CSPI06G14280	Wild cucumber (PI 183967)	carcpiB0481
Carg12386	Cucsa.138850	Cucumber (Gy14) v1	carcgyB0508
Carg12386	Cucsa.117700	Cucumber (Gy14) v1	carcgyB0507
Carg12386	CmaCh13G001100	Cucurbita maxima (Rimu)	carcmaB0610
Carg12386	CmaCh01G006190	Cucurbita maxima (Rimu)	carcmaB0613
Carg12386	CmaCh02G007860	Cucurbita maxima (Rimu)	carcmaB0618
Carg12386	CmoCh01G006470	Cucurbita moschata (Rifu)	carcmoB0596
Carg12386	CmoCh02G007860	Cucurbita moschata (Rifu)	carcmoB0601
Carg12386	CmoCh13G001080	Cucurbita moschata (Rifu)	carcmoB0594
Carg12386	CmoCh20G004180	Cucurbita moschata (Rifu)	carcmoB0598
Carg12386	Lsi10G013950	Bottle gourd (USVL1VR-Ls)	carlsiB400
Carg12386	Lsi02G013410	Bottle gourd (USVL1VR-Ls)	carlsiB403
Carg12386	Cp4.1LG20g08290	Cucurbita pepo (Zucchini)	carcpeB0620
Carg12386	Cp4.1LG16g06120	Cucurbita pepo (Zucchini)	carcpeB0617
Carg12386	Cp4.1LG02g13630	Cucurbita pepo (Zucchini)	carcpeB0622
Carg12386	CsGy1G022790	Cucumber (Gy14) v2	carcgybB0448
Carg12386	MELO3C020611.2	Melon (DHL92) v3.6.1	carmedB0451
Carg12386	MELO3C025894.2	Melon (DHL92) v3.6.1	carmedB0448
Carg12386	CsaV3_6G016650	Cucumber (Chinese Long) v3	carcucB0477
Carg12386	CsaV3_1G034500	Cucumber (Chinese Long) v3	carcucB0472
Carg12386	Cla97C02G045950	Watermelon (97103) v2	carwmbB0466
Carg12386	Cla97C03G052210	Watermelon (97103) v2	carwmbB0467
Carg12386	Bhi10G000590	Wax gourd	carwgoB0529
Carg12386	Bhi08G000489	Wax gourd	carwgoB0535

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12386	Carg03332	Silver-seed gourd	carcarB353
Carg12386	Carg20642	Silver-seed gourd	carcarB408

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12386	Silver-seed gourd	carcarB192
Carg12386	Silver-seed gourd	carcarB449
Carg12386	Cucumber (Gy14) v2	carcgybB0452
Carg12386	Cucumber (Gy14) v2	carcgybB0450
Carg12386	Cucumber (Gy14) v1	carcgyB0510
Carg12386	Cucurbita maxima (Rimu)	carcmaB0612
Carg12386	Cucurbita moschata (Rifu)	carcmoB0595
Carg12386	Cucurbita pepo (Zucchini)	carcpeB0619
Carg12386	Wild cucumber (PI 183967)	carcpiB0478
Carg12386	Cucumber (Chinese Long) v2	carcuB0473
Carg12386	Cucumber (Chinese Long) v3	carcucB0475
Carg12386	Bottle gourd (USVL1VR-Ls)	carlsiB405
Carg12386	Melon (DHL92) v3.5.1	carmeB0450
Carg12386	Melon (DHL92) v3.6.1	carmedB0453
Carg12386	Watermelon (Charleston Gray)	carwcgB0431
Carg12386	Watermelon (97103) v1	carwmB0438
Carg12386	Watermelon (97103) v1	carwmB0441
Carg12386	Watermelon (97103) v2	carwmbB0463