Carg12383 (gene) Silver-seed gourd

NameCarg12383
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_074 : 671175 .. 671381 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGATACCGAACGCCGGAGCGACAGGAGTTTCGAATTCAGCCGGCAAAGGTGCCACCGCCGCCGCCGAGGAAAAAGGCGGTTGCGGCGGCGAAGAAGCGGGAGGCTCCAGCGAATGGATATTTTCAACTGCCTGACGATCTTGAAGTATATTTTTTAGTGGTTCCTAGAGTGGCCGGCGGCGGTGATCTGAGTGGTGGCTAG

mRNA sequence

ATGGAGGGATACCGAACGCCGGAGCGACAGGAGTTTCGAATTCAGCCGGCAAAGGTGCCACCGCCGCCGCCGAGGAAAAAGGCGGTTGCGGCGGCGAAGAAGCGGGAGGCTCCAGCGAATGGATATTTTCAACTGCCTGACGATCTTGAAGTATATTTTTTAGTGGTTCCTAGAGTGGCCGGCGGCGGTGATCTGAGTGGTGGCTAG

Coding sequence (CDS)

ATGGAGGGATACCGAACGCCGGAGCGACAGGAGTTTCGAATTCAGCCGGCAAAGGTGCCACCGCCGCCGCCGAGGAAAAAGGCGGTTGCGGCGGCGAAGAAGCGGGAGGCTCCAGCGAATGGATATTTTCAACTGCCTGACGATCTTGAAGTATATTTTTTAGTGGTTCCTAGAGTGGCCGGCGGCGGTGATCTGAGTGGTGGCTAG

Protein sequence

MEGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPRVAGGGDLSGG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12383-RACarg12383-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR33142FAMILY NOT NAMEDcoord: 2..58
NoneNo IPR availablePANTHERPTHR33142:SF15SUBFAMILY NOT NAMEDcoord: 2..58

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg12383Silver-seed gourdcarcarB192
Carg12383Silver-seed gourdcarcarB353
Carg12383Silver-seed gourdcarcarB408
Carg12383Silver-seed gourdcarcarB449
Carg12383Cucumber (Gy14) v2carcgybB0452
Carg12383Cucumber (Gy14) v2carcgybB0448
Carg12383Cucumber (Gy14) v2carcgybB0450
Carg12383Cucumber (Gy14) v1carcgyB0507
Carg12383Cucumber (Gy14) v1carcgyB0508
Carg12383Cucumber (Gy14) v1carcgyB0510
Carg12383Cucurbita maxima (Rimu)carcmaB0613
Carg12383Cucurbita maxima (Rimu)carcmaB0610
Carg12383Cucurbita maxima (Rimu)carcmaB0612
Carg12383Cucurbita maxima (Rimu)carcmaB0618
Carg12383Cucurbita moschata (Rifu)carcmoB0594
Carg12383Cucurbita moschata (Rifu)carcmoB0595
Carg12383Cucurbita moschata (Rifu)carcmoB0596
Carg12383Cucurbita moschata (Rifu)carcmoB0598
Carg12383Cucurbita moschata (Rifu)carcmoB0601
Carg12383Cucurbita pepo (Zucchini)carcpeB0617
Carg12383Cucurbita pepo (Zucchini)carcpeB0619
Carg12383Cucurbita pepo (Zucchini)carcpeB0620
Carg12383Cucurbita pepo (Zucchini)carcpeB0622
Carg12383Wild cucumber (PI 183967)carcpiB0481
Carg12383Wild cucumber (PI 183967)carcpiB0476
Carg12383Wild cucumber (PI 183967)carcpiB0478
Carg12383Cucumber (Chinese Long) v2carcuB0471
Carg12383Cucumber (Chinese Long) v2carcuB0473
Carg12383Cucumber (Chinese Long) v2carcuB0475
Carg12383Cucumber (Chinese Long) v3carcucB0472
Carg12383Cucumber (Chinese Long) v3carcucB0475
Carg12383Cucumber (Chinese Long) v3carcucB0477
Carg12383Melon (DHL92) v3.5.1carmeB0446
Carg12383Bottle gourd (USVL1VR-Ls)carlsiB400
Carg12383Bottle gourd (USVL1VR-Ls)carlsiB403
Carg12383Bottle gourd (USVL1VR-Ls)carlsiB405
Carg12383Melon (DHL92) v3.5.1carmeB0449
Carg12383Melon (DHL92) v3.5.1carmeB0450
Carg12383Melon (DHL92) v3.6.1carmedB0448
Carg12383Melon (DHL92) v3.6.1carmedB0451
Carg12383Melon (DHL92) v3.6.1carmedB0453
Carg12383Watermelon (Charleston Gray)carwcgB0431
Carg12383Watermelon (Charleston Gray)carwcgB0435
Carg12383Watermelon (Charleston Gray)carwcgB0436
Carg12383Watermelon (97103) v1carwmB0438
Carg12383Watermelon (97103) v1carwmB0440
Carg12383Watermelon (97103) v1carwmB0441
Carg12383Watermelon (97103) v1carwmB0444
Carg12383Watermelon (97103) v2carwmbB0463
Carg12383Watermelon (97103) v2carwmbB0466
Carg12383Watermelon (97103) v2carwmbB0467
Carg12383Wax gourdcarwgoB0529
Carg12383Wax gourdcarwgoB0535