Carg12330 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGATGTTGGTCAGAACAACACCGGTGATTTTCCTGCTGTTCCTACCCATGGCGGTCAATATGTGCAGTATAATATCTTCGGGAATCCGTTTGAAATCACCTCCAAATATCGTCCGCCTATCATGCCTGTAGGTCGCGGCGCCTACGGAATCGTTTGGTATTTTTCATCTGTTTTTGTTGGAATTGTTGGTGATCTTGTCTGGAAACGCCTTTGGATTGAGTTTTTGTCTTATACCTTTTTTTTTTTTGTTGGATTTGGTTTGTTTGTAGTTCGATTTTGAATTCGGAGACCAACGAGATGGTTGCGGTTAAGAAGATTGCCAACGCGTTTGATAATCATATGGATGCGAAACGGACGCTCCGTGAGATCAAGCTTCTCCGGCATTTGGATCACGAAAATGTGAGAGAGTTTATCCCTGTAGTTGCTGTAATTGTTGTTTCGATTAATCCATGCGATTTAGATTTCTTCCGTTTGTGTCTGTGGATTCAATTTGGTGTTCATCTGATTTTGGACGGCGTTTAATCATTAACCGCGCTCAGCGTCGTTGAATTGCAAAATATTGATCGATCAATTCTTTTGTCTAGAATAGTTCTTGGCGGTGATTGACTAATCTCAATAATTTTGTGTTGTTCTTGGTGGCGTGGGTAATCATGATAGAATCCTAGAAAGTTCATTTTGAATCTATTCAATTGTGATGTGCCGGTCTGTTTAAGCAATTGAACAGATTATTCTTGGTGATTTGGCCCATAACCTATAGTAGCATTTGGTTCTGCATAATTTTGTTGATTGTGGGAAGTTTTTGGGATTTGACTTTTTAGAATTATACTTTACTGGAATTGGAACTGCTTTATATGATGGGTATGTTGCTTTCTTTATACTTCCTGATTTGAAGGAAGTTTTTAAATAGTTGTTCTTTAGGGCCACACACTCATATAGATTGTGATTCATTTGATGTAGGTAATAGGCATAAGAGATGTGATTCCTCCTCCTGTGCGGAGAGAATTCAGTGATGTCTACATTTCCACTGAACTAATGGACACCGATCTTCACCAAATAATCCGCTCAAACCAAACTTTATCAGAAGAGCATTGTCAGGTAGGACGACGAGGTCCTTTACTTTGTTCATCATTGATTATGTTAATTGCACCTTTGATTTTTTTTTTCTTCAACTATTCCTCTTGTAATATAAGGTTTGGCTTGCTTTGCAGTATTTCCTTTATCAGATTCTCCGAGGACTTAAATACATACATTCTGCAAATGTCATTCATCGGGACTTGAAACCGAGCAATCTACTGCTTAATGCAAACTGTGATCTTAAAATCTGTGACTTTGGTCTTGCTCGTCCAACTTCGGAAAATGAAAGCATGACAGAATATGTTGTTACGAGATGGTATAGGGCACCTGAGTTACTATTGAACTCTGATTATACAGCTGCTATTGATATATGGTCTGTTGGTTGCATCTATTTGGAGCTTATGAACAGAAGGCCTCTATTTCCAGGCAGGGATCATGTGCATCAGATGCGTTTACTGACTGAGGTAAAACAATCTATACAGAGCTTATGCAGTTTTTTGGTTATAGACTATCCAATTTTGACTATTAAAGATTTAGCTGATGTGAAAATGTACCAGCGGATTTTTGTTCCTGGATAGTTCTTGTGATGTCTCTTAATATGATCATTCTAAGTTTATAATCTGAATTTTGTTGACTATGACACTCTGTCAAAGATAATTTCTTGGTTCTGTTTTGATAGTTTTCATCAGTTTCCATTTGGGATATTGAGTTTGGCCAATGATTGTCAAGTTCTATTTTTCCACTAAAAAAAGCTAATGTTCTTTCATTTGTTCTGAAATTGATTGCCTTCTCCTTGTATCATTTTAATTATCAGCTTCTTGGCACACCAACCGAATCTGATCTTGGTTTCATTCGAAACGAAGACTCGAAGAGATATCTTCGGCAGCTACCTCCACATCCTCGTCAGCCATTAGCAACAGTTTTCCCTCATGTTCATCCTTTGGCAATTGATCTTGTGGATAGAATGTTGACGTTTGATCCAACCAGGAGAATTACTGGTAAATATTTATCAAATCTCAATTCTTTAATCATTCGATGGTTTGAATGAATTAATTGCTCGTGAGATACAATGTTCATGATAGTTTAGTCATTAGAATGTGTGGAGTAGGATACATTAAATTATGACTTCTAGATTTCCTTGCAATTTTCTTTCAAGGTATAAACTATCATGGATTGGTTCAATATTCAACGTTGGAAATTCATATTGTCATTTGAGGTCATTGTTTAAACTTTAGCATTAGGTTTCTGAAATACAATGCCTTACAAGTTTTTTCATTCTAAGTATTATAAGATCGATAGTTGTCATTTGGGATTAGTGGTGTGCATGTGCTGATCAAGACAATCTAAATTATTTCCTCCATTGGCATGGAATTTCAGCATTAAGCAGCAAGCTATACGTTTATGTTCCAATATCTTCTTGTCATTTCTCCTCCCATTTCCTCGCTGTTGCTGGCCATGCTCTTCATGTTCAGAATAGATGGCTGTTGAAATAGTTTTCCTTTTCACATCATTCCTTGGTTTAACTTCTCGAATTTTTGTTTTGAACAGTTGAAGAAGCATTGGCACATCCATACCTAGAGAGACTGCACGACGTAGCTGATGAGCCAGTTTGCCCTGAGCCATTCTCGTTCGAGTTTGAGCAACAATACCTGGATGAAGAGCAGATGAAGGAGATGATTTACAGAGAAGCATTGGCACTCAATCCAGAATTTGCATGACCATAAATGTAGATGTCGTCCTCCTGAGCAACTGCAGCGACTTTGCAAATATGGAATAACACGCGACAAAAGGATCAGGTTGGTATACGAAAACGAAACATCGTTAATTAAGCTTAGGATATGTTTGAGAGTGATTTTGGAATGACCCAAACCACCTTCATCATGTCCAAAATTTACTAAAAAGAACATGACAAAAGTGATTTTGATCCTTCCAAAATC ATGGCTGATGTTGGTCAGAACAACACCGGTGATTTTCCTGCTGTTCCTACCCATGGCGGTCAATATGTGCAGTATAATATCTTCGGGAATCCGTTTGAAATCACCTCCAAATATCGTCCGCCTATCATGCCTGTAGGTCGCGGCGCCTACGGAATCGTTTGGTATTTTTCATCTGTTTTTGTTGGAATTGTTGGTGATCTTGTAATAGGCATAAGAGATGTGATTCCTCCTCCTGTGCGGAGAGAATTCAGTGATGTCTACATTTCCACTGAACTAATGGACACCGATCTTCACCAAATAATCCGCTCAAACCAAACTTTATCAGAAGAGCATTGTCAGCTTCTTGGCACACCAACCGAATCTGATCTTGGTTTCATTCGAAACGAAGACTCGAAGAGATATCTTCGGCAGCTACCTCCACATCCTCGTCAGCCATTAGCAACAGTTTTCCCTCATGTTCATCCTTTGGCAATTGATCTTGTGGATAGAATGTTGACGTTTGATCCAACCAGGAGAATTACTGTTGAAGAAGCATTGGCACATCCATACCTAGAGAGACTGCACGACGTAGCTGATGAGCCAGTTTGCCCTGAGCCATTCTCGTTCGAGTTTGAGCAACAATACCTGGATGAAGAGCAGATGAAGGAGATGATTTACAGAGAAGCATTGGCACTCAATCCAGAATTTGCATGACCATAAATGTAGATGTCGTCCTCCTGAGCAACTGCAGCGACTTTGCAAATATGGAATAACACGCGACAAAAGGATCAGGTTGGTATACGAAAACGAAACATCGTTAATTAAGCTTAGGATATGTTTGAGAGTGATTTTGGAATGACCCAAACCACCTTCATCATGTCCAAAATTTACTAAAAAGAACATGACAAAAGTGATTTTGATCCTTCCAAAATC ATGGCTGATGTTGGTCAGAACAACACCGGTGATTTTCCTGCTGTTCCTACCCATGGCGGTCAATATGTGCAGTATAATATCTTCGGGAATCCGTTTGAAATCACCTCCAAATATCGTCCGCCTATCATGCCTGTAGGTCGCGGCGCCTACGGAATCGTTTGGTATTTTTCATCTGTTTTTGTTGGAATTGTTGGTGATCTTGTAATAGGCATAAGAGATGTGATTCCTCCTCCTGTGCGGAGAGAATTCAGTGATGTCTACATTTCCACTGAACTAATGGACACCGATCTTCACCAAATAATCCGCTCAAACCAAACTTTATCAGAAGAGCATTGTCAGCTTCTTGGCACACCAACCGAATCTGATCTTGGTTTCATTCGAAACGAAGACTCGAAGAGATATCTTCGGCAGCTACCTCCACATCCTCGTCAGCCATTAGCAACAGTTTTCCCTCATGTTCATCCTTTGGCAATTGATCTTGTGGATAGAATGTTGACGTTTGATCCAACCAGGAGAATTACTGTTGAAGAAGCATTGGCACATCCATACCTAGAGAGACTGCACGACGTAGCTGATGAGCCAGTTTGCCCTGAGCCATTCTCGTTCGAGTTTGAGCAACAATACCTGGATGAAGAGCAGATGAAGGAGATGATTTACAGAGAAGCATTGGCACTCAATCCAGAATTTGCATGA MADVGQNNTGDFPAVPTHGGQYVQYNIFGNPFEITSKYRPPIMPVGRGAYGIVWYFSSVFVGIVGDLVIGIRDVIPPPVRREFSDVYISTELMDTDLHQIIRSNQTLSEEHCQLLGTPTESDLGFIRNEDSKRYLRQLPPHPRQPLATVFPHVHPLAIDLVDRMLTFDPTRRITVEEALAHPYLERLHDVADEPVCPEPFSFEFEQQYLDEEQMKEMIYREALALNPEFA
BLAST of Carg12330 vs. NCBI nr
Match: XP_022948699.1 (mitogen-activated protein kinase 3-like [Cucurbita moschata]) HSP 1 Score: 377.9 bits (969), Expect = 2.5e-101 Identity = 217/370 (58.65%), Postives = 219/370 (59.19%), Query Frame = 0
BLAST of Carg12330 vs. NCBI nr
Match: XP_022997943.1 (mitogen-activated protein kinase 3-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 375.2 bits (962), Expect = 1.6e-100 Identity = 214/373 (57.37%), Postives = 219/373 (58.71%), Query Frame = 0
BLAST of Carg12330 vs. NCBI nr
Match: NP_001267653.1 (mitogen-activated protein kinase 3-like [Cucumis sativus] >AAZ57337.1 Trichoderma-induced protein kinase [Cucumis sativus] >ABG89857.1 NO3-stress-induced mitogen activated protein kinase [Cucumis sativus] >KGN65657.1 hypothetical protein Csa_1G479630 [Cucumis sativus]) HSP 1 Score: 363.6 bits (932), Expect = 4.9e-97 Identity = 206/373 (55.23%), Postives = 217/373 (58.18%), Query Frame = 0
BLAST of Carg12330 vs. NCBI nr
Match: NP_001284376.1 (mitogen-activated protein kinase 3 [Cucumis melo] >AEG89601.1 mitogen-activated protein [Cucumis melo]) HSP 1 Score: 361.7 bits (927), Expect = 1.9e-96 Identity = 206/373 (55.23%), Postives = 215/373 (57.64%), Query Frame = 0
BLAST of Carg12330 vs. NCBI nr
Match: XP_022159047.1 (mitogen-activated protein kinase 3-like [Momordica charantia]) HSP 1 Score: 348.6 bits (893), Expect = 1.6e-92 Identity = 199/374 (53.21%), Postives = 214/374 (57.22%), Query Frame = 0
BLAST of Carg12330 vs. TAIR10
Match: AT3G45640.1 (mitogen-activated protein kinase 3) HSP 1 Score: 279.6 bits (714), Expect = 1.7e-75 Identity = 167/371 (45.01%), Postives = 192/371 (51.75%), Query Frame = 0
BLAST of Carg12330 vs. TAIR10
Match: AT2G43790.1 (MAP kinase 6) HSP 1 Score: 245.0 bits (624), Expect = 4.6e-65 Identity = 143/360 (39.72%), Postives = 181/360 (50.28%), Query Frame = 0
BLAST of Carg12330 vs. TAIR10
Match: AT4G01370.1 (MAP kinase 4) HSP 1 Score: 208.0 bits (528), Expect = 6.2e-54 Identity = 123/355 (34.65%), Postives = 167/355 (47.04%), Query Frame = 0
BLAST of Carg12330 vs. TAIR10
Match: AT2G46070.1 (mitogen-activated protein kinase 12) HSP 1 Score: 186.4 bits (472), Expect = 1.9e-47 Identity = 120/369 (32.52%), Postives = 165/369 (44.72%), Query Frame = 0
BLAST of Carg12330 vs. TAIR10
Match: AT1G01560.2 (MAP kinase 11) HSP 1 Score: 184.5 bits (467), Expect = 7.4e-47 Identity = 118/354 (33.33%), Postives = 159/354 (44.92%), Query Frame = 0
BLAST of Carg12330 vs. Swiss-Prot
Match: sp|Q39023|MPK3_ARATH (Mitogen-activated protein kinase 3 OS=Arabidopsis thaliana OX=3702 GN=MPK3 PE=1 SV=2) HSP 1 Score: 279.6 bits (714), Expect = 3.0e-74 Identity = 167/371 (45.01%), Postives = 192/371 (51.75%), Query Frame = 0
BLAST of Carg12330 vs. Swiss-Prot
Match: sp|Q07176|MMK1_MEDSA (Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa OX=3879 GN=MMK1 PE=1 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 4.0e-66 Identity = 148/360 (41.11%), Postives = 183/360 (50.83%), Query Frame = 0
BLAST of Carg12330 vs. Swiss-Prot
Match: sp|Q06060|MPK_PEA (Mitogen-activated protein kinase homolog D5 OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 9.8e-65 Identity = 147/360 (40.83%), Postives = 181/360 (50.28%), Query Frame = 0
BLAST of Carg12330 vs. Swiss-Prot
Match: sp|A2XFC8|MPK5_ORYSI (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. indica OX=39946 GN=MPK5 PE=1 SV=2) HSP 1 Score: 245.7 bits (626), Expect = 4.9e-64 Identity = 140/358 (39.11%), Postives = 184/358 (51.40%), Query Frame = 0
BLAST of Carg12330 vs. Swiss-Prot
Match: sp|Q10N20|MPK5_ORYSJ (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. japonica OX=39947 GN=MPK5 PE=1 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 4.9e-64 Identity = 140/358 (39.11%), Postives = 184/358 (51.40%), Query Frame = 0
BLAST of Carg12330 vs. TrEMBL
Match: tr|Q0R4I2|Q0R4I2_CUCSA (Mitogen-activated protein kinase OS=Cucumis sativus OX=3659 GN=TIPK PE=2 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 3.2e-97 Identity = 206/373 (55.23%), Postives = 217/373 (58.18%), Query Frame = 0
BLAST of Carg12330 vs. TrEMBL
Match: tr|F8ULD9|F8ULD9_CUCME (Mitogen-activated protein kinase OS=Cucumis melo OX=3656 GN=LOC103497219 PE=2 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 1.2e-96 Identity = 206/373 (55.23%), Postives = 215/373 (57.64%), Query Frame = 0
BLAST of Carg12330 vs. TrEMBL
Match: tr|A0A0H4K5Q1|A0A0H4K5Q1_MOMCH (Mitogen-activated protein kinase OS=Momordica charantia OX=3673 PE=2 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 9.1e-92 Identity = 198/374 (52.94%), Postives = 213/374 (56.95%), Query Frame = 0
BLAST of Carg12330 vs. TrEMBL
Match: tr|M5VZP6|M5VZP6_PRUPE (Mitogen-activated protein kinase OS=Prunus persica OX=3760 GN=PRUPE_6G091700 PE=3 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 3.7e-85 Identity = 186/371 (50.13%), Postives = 211/371 (56.87%), Query Frame = 0
BLAST of Carg12330 vs. TrEMBL
Match: tr|A0A0S2SWD3|A0A0S2SWD3_9ROSA (Mitogen-activated protein kinase OS=Prunus cerasus x Prunus canescens OX=1759535 PE=2 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 3.7e-85 Identity = 186/371 (50.13%), Postives = 211/371 (56.87%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |