Carg12327 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAACGATTGCACGGCTGTGGAGATCAATGGCCTTCCCACCTACGATGGAAGGTACATCCTCTACAACGTTCTCGGCAACTTATTTGAGGTCTCCGCCAAGTACTCCCCTTCAATTCAGCCTGTTGGACGCGGTGCTTACGCCATTGTTTGGTACTTCTTTTCCTCCTCTTTCGTTTTTCGCTTTGCTTCTAAGTTCTTCGATTTTATTTTGGTATATGCTAAGATTTTGATCATCGACGAATTCGGAGACGAAAGATGAGGTTGCGATAAAGAAGATAGGGAATGCTTTTGATAACTGGGTTGATACCAAGAGAACTCTTCGTGAGATTAAACTTCTATGCCATATGGACCATGAAAATGTATTTCGCTCAAATAAACATTCTTCATTTGGGTGCAAATTTTGCTATGCTTTAACATCCATTTATTGCTGTGATTTGTTCTTAGCAAATTCCTCATATCCAGGTTGAACTTCAGCTTAATTAGTGTTTAATTTTGAACTTTTTATTTATATGTTTCTACTTCAGCTCTGTTTTTCTCATGCCATGAACAGATTTAGTTAATGTTTAGTTGCCCTGGGGACTTATTTCATTCTGCCATTGAAGCATAATGATCTGTTTCTAACTTCCTTTCAGATTATAAAGATCAAAGATATAATTCCTCCACCAGAAAAGGAAAAATTCAATGATGTGTATATTGTGTATGTATTAATGGACACTGACCTGCATCAGATCATTTGCTCTAGCCAAGCTCTAACAGACGATCACTGTCAGGTAAGGGACACTTACCATTCCAGTTAGATCTTAGCAAAAGTTTGTTTCAATTCTTAGTACAAAGTTTTTATGTTGATTATGATCTTGTTGGAGGAACAAGAAAGATTTGAAACTGTCTTGAATGATTTTATGTTTGTTGTTTGGACAGTACTTCTTATACCAGTTACTACGAGGTTTGAAGTATTTACACTCTGCAAATGTCTTGCACCGAGATCTAAAACCAGGCAATCTGCTTCTCAATGCAAATTGCGACCTCAAGATTTGTGATTTTGGGTTAGCAAGAACAACATCAGAGACGGATTTTATGACAGAATATGTTGTAACCAGATGGTATCGAGCTCCTGAGCTACTACTTAACACCTCTGAATACACTGCAGCCATAGATATTTGGTCTGTTGGATGTATTCTCATGGAAATTCTAAGGAGGGAGCCACTGTTCCCTGGTAAAGATTATGCGTAACAACTGGGGCTTATAACCGAGGTACTTGATCATTGTCTTCCAATTTTCTGCATGATGTTTGAAATTATGCATTCAAACGCTAAGGTGATGTGAGATCCCACGTCGGTTGGAGAGGAGAACTAAACATTCCTTATAAGGGTGAGGTTAGATGCGTTTTAAAACCTTGAGGCTGACGGCAATACGTAACGAGCCAAAATGGACAATATCGGCTAGTGGTGGGTTTTGGGCTGTTATAAATAGTATCAAAGTTAGACATCGGGCGGTGTACCAGCGAGGATGCTAGGCTCCAAGGGAGGTGGATTGTAAGAGATCCCACCTCGGTTGGAAAAGGGAACGAAACATTTCTTATAAGAATGCGGAAAACCTCTCCCTAGTAGATGCATTTTGAAACCGTGAGGCTGGTAACGGGCAAAAGCAGACAATATCTGTTAGTGGTGGGTTTGAGCGAATACAAATGTTATCAAAGCCAGACACTGGGCGGTGTGCCAGCGAGGACGCTGGTCCCAAGAGGTGAATTGTGAGATCTCACATCAGTTAGAGGGGGGAACAAAACATTCCTTATAAGGGTAGTAGACGCGCTTTAAACCCGTGAGACTGACGGTGATACGTAACGAGATAAAACAGACAATATCTATTAACGGTGGGTTTGAGCTATTACATATAGTCAATTTTTACAGTAGTAGTAGTCAGTTTCGTTAACTGCCTAAAATGTTATTTGCATATGTTTGCTGCTCTTCCTGGTATTATTTTTATGGTTTAATACTAAAACATAGTTTTGTTTCTTAGATTGTGAGTTTATGTTCGAGTATAGTTTGCTTTTCGTGCCATTGGGTTTGGTTTGAAAGATCAAACATTTAATTTTGGTCCTTAAACTTTTAAAATTGACATTAATTTTTATAGCTCAGAAAATAG ATGGAAAACGATTGCACGGCTGTGGAGATCAATGGCCTTCCCACCTACGATGGAAGGTACATCCTCTACAACGTTCTCGGCAACTTATTTGAGGTCTCCGCCAAGTACTCCCCTTCAATTCAGCCTGTTGGACGCGGTGCTTACGCCATTGTTTGGTACTTCTTTTCCTCCTCTTTCGTTTTTCGCTTTGCTTCTAAGTTCTTCGATTTTATTTTGACGAAAGATGAGGTTGCGATAAAGAAGATAGGGAATGCTTTTGATAACTGGGTTGATACCAAGAGAACTCTTCGTGAGATTAAACTTCTATGCCATATGGACCATGAAAATATTATAAAGATCAAAGATATAATTCCTCCACCAGAAAAGGAAAAATTCAATGATGTGTATATTGTGTATGTATTAATGGACACTGACCTGCATCAGATCATTTGCTCTAGCCAAGCTCTAACAGACGATCACTGTCAGCTCAGAAAATAG ATGGAAAACGATTGCACGGCTGTGGAGATCAATGGCCTTCCCACCTACGATGGAAGGTACATCCTCTACAACGTTCTCGGCAACTTATTTGAGGTCTCCGCCAAGTACTCCCCTTCAATTCAGCCTGTTGGACGCGGTGCTTACGCCATTGTTTGGTACTTCTTTTCCTCCTCTTTCGTTTTTCGCTTTGCTTCTAAGTTCTTCGATTTTATTTTGACGAAAGATGAGGTTGCGATAAAGAAGATAGGGAATGCTTTTGATAACTGGGTTGATACCAAGAGAACTCTTCGTGAGATTAAACTTCTATGCCATATGGACCATGAAAATATTATAAAGATCAAAGATATAATTCCTCCACCAGAAAAGGAAAAATTCAATGATGTGTATATTGTGTATGTATTAATGGACACTGACCTGCATCAGATCATTTGCTCTAGCCAAGCTCTAACAGACGATCACTGTCAGCTCAGAAAATAG MENDCTAVEINGLPTYDGRYILYNVLGNLFEVSAKYSPSIQPVGRGAYAIVWYFFSSSFVFRFASKFFDFILTKDEVAIKKIGNAFDNWVDTKRTLREIKLLCHMDHENIIKIKDIIPPPEKEKFNDVYIVYVLMDTDLHQIICSSQALTDDHCQLRK
BLAST of Carg12327 vs. NCBI nr
Match: XP_023524579.1 (mitogen-activated protein kinase homolog NTF6-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 300.1 bits (767), Expect = 4.6e-78 Identity = 150/173 (86.71%), Postives = 152/173 (87.86%), Query Frame = 0
BLAST of Carg12327 vs. NCBI nr
Match: XP_022948704.1 (mitogen-activated protein kinase homolog NTF6-like [Cucurbita moschata]) HSP 1 Score: 277.7 bits (709), Expect = 2.4e-71 Identity = 137/155 (88.39%), Postives = 138/155 (89.03%), Query Frame = 0
BLAST of Carg12327 vs. NCBI nr
Match: XP_022964848.1 (mitogen-activated protein kinase homolog NTF6 [Cucurbita moschata] >XP_023519830.1 mitogen-activated protein kinase homolog NTF6-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 233.8 bits (595), Expect = 4.0e-58 Identity = 117/155 (75.48%), Postives = 127/155 (81.94%), Query Frame = 0
BLAST of Carg12327 vs. NCBI nr
Match: XP_022970376.1 (mitogen-activated protein kinase homolog NTF6 [Cucurbita maxima]) HSP 1 Score: 233.8 bits (595), Expect = 4.0e-58 Identity = 117/155 (75.48%), Postives = 127/155 (81.94%), Query Frame = 0
BLAST of Carg12327 vs. NCBI nr
Match: XP_004148790.2 (PREDICTED: mitogen-activated protein kinase homolog NTF6 [Cucumis sativus] >KGN64720.1 hypothetical protein Csa_1G077220 [Cucumis sativus]) HSP 1 Score: 224.9 bits (572), Expect = 1.9e-55 Identity = 115/156 (73.72%), Postives = 126/156 (80.77%), Query Frame = 0
BLAST of Carg12327 vs. TAIR10
Match: AT1G07880.2 (Protein kinase superfamily protein) HSP 1 Score: 191.8 bits (486), Expect = 3.2e-49 Identity = 97/147 (65.99%), Postives = 111/147 (75.51%), Query Frame = 0
BLAST of Carg12327 vs. TAIR10
Match: AT4G01370.1 (MAP kinase 4) HSP 1 Score: 181.0 bits (458), Expect = 5.6e-46 Identity = 91/144 (63.19%), Postives = 106/144 (73.61%), Query Frame = 0
BLAST of Carg12327 vs. TAIR10
Match: AT4G11330.1 (MAP kinase 5) HSP 1 Score: 171.0 bits (432), Expect = 5.8e-43 Identity = 89/152 (58.55%), Postives = 103/152 (67.76%), Query Frame = 0
BLAST of Carg12327 vs. TAIR10
Match: AT2G43790.1 (MAP kinase 6) HSP 1 Score: 170.6 bits (431), Expect = 7.6e-43 Identity = 84/141 (59.57%), Postives = 102/141 (72.34%), Query Frame = 0
BLAST of Carg12327 vs. TAIR10
Match: AT2G46070.1 (mitogen-activated protein kinase 12) HSP 1 Score: 165.2 bits (417), Expect = 3.2e-41 Identity = 85/146 (58.22%), Postives = 104/146 (71.23%), Query Frame = 0
BLAST of Carg12327 vs. Swiss-Prot
Match: sp|Q40531|NTF6_TOBAC (Mitogen-activated protein kinase homolog NTF6 OS=Nicotiana tabacum OX=4097 GN=NTF6 PE=2 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 1.9e-51 Identity = 103/156 (66.03%), Postives = 121/156 (77.56%), Query Frame = 0
BLAST of Carg12327 vs. Swiss-Prot
Match: sp|Q9LQQ9|MPK13_ARATH (Mitogen-activated protein kinase 13 OS=Arabidopsis thaliana OX=3702 GN=MPK13 PE=1 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 5.7e-48 Identity = 97/147 (65.99%), Postives = 111/147 (75.51%), Query Frame = 0
BLAST of Carg12327 vs. Swiss-Prot
Match: sp|Q336X9|MPK6_ORYSJ (Mitogen-activated protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MPK6 PE=2 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 9.1e-46 Identity = 94/147 (63.95%), Postives = 108/147 (73.47%), Query Frame = 0
BLAST of Carg12327 vs. Swiss-Prot
Match: sp|A9S9Q8|MPK4B_PHYPA (Mitogen-activated protein kinase 4b OS=Physcomitrella patens subsp. patens OX=3218 GN=MPK4b PE=1 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 1.6e-45 Identity = 93/146 (63.70%), Postives = 107/146 (73.29%), Query Frame = 0
BLAST of Carg12327 vs. Swiss-Prot
Match: sp|Q39024|MPK4_ARATH (Mitogen-activated protein kinase 4 OS=Arabidopsis thaliana OX=3702 GN=MPK4 PE=1 SV=2) HSP 1 Score: 181.0 bits (458), Expect = 1.0e-44 Identity = 91/144 (63.19%), Postives = 106/144 (73.61%), Query Frame = 0
BLAST of Carg12327 vs. TrEMBL
Match: tr|A0A0A0LS13|A0A0A0LS13_CUCSA (Mitogen-activated protein kinase OS=Cucumis sativus OX=3659 GN=Csa_1G077220 PE=3 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.2e-55 Identity = 115/156 (73.72%), Postives = 126/156 (80.77%), Query Frame = 0
BLAST of Carg12327 vs. TrEMBL
Match: tr|A0A1S3CNX4|A0A1S3CNX4_CUCME (Mitogen-activated protein kinase OS=Cucumis melo OX=3656 GN=LOC103502937 PE=3 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 6.1e-55 Identity = 114/156 (73.08%), Postives = 125/156 (80.13%), Query Frame = 0
BLAST of Carg12327 vs. TrEMBL
Match: tr|A0A2D0ULS2|A0A2D0ULS2_CUCSA (Mitogen-activated protein kinase OS=Cucumis sativus OX=3659 PE=2 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 8.0e-55 Identity = 114/156 (73.08%), Postives = 125/156 (80.13%), Query Frame = 0
BLAST of Carg12327 vs. TrEMBL
Match: tr|A0A0A7R545|A0A0A7R545_GOSHI (Mitogen-activated protein kinase OS=Gossypium hirsutum OX=3635 GN=MPK12 PE=2 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 2.3e-54 Identity = 110/155 (70.97%), Postives = 122/155 (78.71%), Query Frame = 0
BLAST of Carg12327 vs. TrEMBL
Match: tr|A0A2P5QSB5|A0A2P5QSB5_GOSBA (Mitogen-activated protein kinase OS=Gossypium barbadense OX=3634 GN=GOBAR_AA39070 PE=3 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 2.3e-54 Identity = 110/155 (70.97%), Postives = 122/155 (78.71%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |